View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17999_low_16 (Length: 233)

Name: NF17999_low_16
Description: NF17999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17999_low_16
NF17999_low_16
[»] chr5 (21 HSPs)
chr5 (101-218)||(2155029-2155146)
chr5 (101-218)||(31143916-31144041)
chr5 (101-196)||(10733370-10733465)
chr5 (101-196)||(29345609-29345704)
chr5 (101-196)||(29348090-29348185)
chr5 (101-196)||(29350563-29350658)
chr5 (101-196)||(42245795-42245890)
chr5 (101-218)||(39363043-39363168)
chr5 (101-196)||(20908640-20908735)
chr5 (101-196)||(265207-265295)
chr5 (101-154)||(22411816-22411869)
chr5 (101-154)||(26012438-26012491)
chr5 (176-218)||(265161-265203)
chr5 (176-218)||(20908739-20908781)
chr5 (176-218)||(29345708-29345750)
chr5 (102-150)||(20918431-20918479)
chr5 (101-153)||(21329913-21329965)
chr5 (102-150)||(29329564-29329612)
chr5 (104-150)||(21808812-21808858)
chr5 (189-218)||(29348194-29348223)
chr5 (189-218)||(29350667-29350696)
[»] chr2 (40 HSPs)
chr2 (101-218)||(24529946-24530063)
chr2 (101-196)||(571033-571128)
chr2 (101-196)||(18808571-18808666)
chr2 (101-196)||(23130506-23130601)
chr2 (101-196)||(23132973-23133068)
chr2 (101-196)||(23709971-23710066)
chr2 (101-196)||(24898642-24898737)
chr2 (101-196)||(24901117-24901212)
chr2 (101-196)||(24903594-24903689)
chr2 (101-196)||(24906071-24906166)
chr2 (101-196)||(24908546-24908641)
chr2 (101-196)||(34402938-34403033)
chr2 (101-194)||(39681942-39682035)
chr2 (101-196)||(26507486-26507581)
chr2 (101-196)||(23135220-23135314)
chr2 (101-196)||(26505008-26505103)
chr2 (101-196)||(32039929-32040024)
chr2 (101-154)||(8155-8208)
chr2 (174-218)||(24898588-24898632)
chr2 (176-219)||(23130605-23130648)
chr2 (176-219)||(23133072-23133115)
chr2 (176-218)||(18808670-18808712)
chr2 (176-218)||(23135318-23135360)
chr2 (176-218)||(23709925-23709967)
chr2 (176-218)||(24901071-24901113)
chr2 (176-218)||(24903548-24903590)
chr2 (176-218)||(24906025-24906067)
chr2 (176-218)||(24908500-24908542)
chr2 (176-218)||(26505107-26505149)
chr2 (176-218)||(26507585-26507627)
chr2 (176-218)||(39682041-39682083)
chr2 (101-154)||(24688712-24688765)
chr2 (101-150)||(38966905-38966954)
chr2 (102-150)||(6725625-6725673)
chr2 (102-150)||(21177830-21177878)
chr2 (102-150)||(23712497-23712545)
chr2 (104-150)||(32452338-32452384)
chr2 (189-218)||(571137-571166)
chr2 (126-154)||(7679287-7679315)
chr2 (102-150)||(24643434-24643482)
[»] chr6 (35 HSPs)
chr6 (101-196)||(26925078-26925173)
chr6 (101-196)||(1541341-1541436)
chr6 (101-196)||(2291619-2291714)
chr6 (101-196)||(8054657-8054752)
chr6 (101-196)||(12741954-12742049)
chr6 (101-196)||(18335031-18335126)
chr6 (101-196)||(19004674-19004769)
chr6 (101-196)||(24422175-24422270)
chr6 (101-196)||(33861423-33861518)
chr6 (101-196)||(33863906-33864001)
chr6 (102-196)||(22781901-22781995)
chr6 (101-193)||(25591198-25591290)
chr6 (101-195)||(25688204-25688298)
chr6 (101-196)||(25656431-25656526)
chr6 (120-196)||(25714114-25714190)
chr6 (101-170)||(25722424-25722493)
chr6 (176-218)||(25591149-25591191)
chr6 (176-218)||(2291573-2291615)
chr6 (176-218)||(8054756-8054798)
chr6 (176-218)||(18334985-18335027)
chr6 (104-154)||(18456371-18456421)
chr6 (176-218)||(19004773-19004815)
chr6 (176-218)||(22781999-22782041)
chr6 (176-218)||(24422274-24422316)
chr6 (176-218)||(26925032-26925074)
chr6 (176-218)||(33861522-33861564)
chr6 (176-218)||(33864005-33864047)
chr6 (101-154)||(23019047-23019100)
chr6 (101-154)||(25643982-25644035)
chr6 (102-150)||(1595179-1595227)
chr6 (123-154)||(20557373-20557404)
chr6 (104-150)||(18461531-18461577)
chr6 (189-218)||(12742058-12742087)
chr6 (101-154)||(20108781-20108834)
chr6 (102-150)||(30677120-30677168)
[»] chr8 (27 HSPs)
chr8 (101-218)||(4482940-4483065)
chr8 (101-196)||(1484030-1484125)
chr8 (101-196)||(4542811-4542906)
chr8 (101-196)||(5853730-5853825)
chr8 (101-196)||(14823403-14823498)
chr8 (101-196)||(18678463-18678558)
chr8 (101-196)||(18717652-18717747)
chr8 (101-196)||(20402855-20402950)
chr8 (101-196)||(22001389-22001477)
chr8 (174-219)||(18678416-18678461)
chr8 (174-219)||(18717605-18717650)
chr8 (176-218)||(1484129-1484171)
chr8 (176-218)||(4542765-4542807)
chr8 (176-218)||(5853684-5853726)
chr8 (176-218)||(14823502-14823544)
chr8 (176-218)||(20402954-20402996)
chr8 (176-218)||(22001481-22001523)
chr8 (101-154)||(983828-983881)
chr8 (101-150)||(13508506-13508555)
chr8 (101-150)||(15203715-15203764)
chr8 (101-150)||(19895894-19895943)
chr8 (101-154)||(21673303-21673356)
chr8 (101-154)||(38855631-38855684)
chr8 (104-157)||(45291173-45291226)
chr8 (101-154)||(6520018-6520071)
chr8 (101-150)||(17612513-17612562)
chr8 (102-150)||(41597818-41597866)
[»] chr7 (43 HSPs)
chr7 (101-218)||(24701883-24702008)
chr7 (101-218)||(24704333-24704458)
chr7 (101-196)||(11972124-11972219)
chr7 (101-196)||(15377152-15377247)
chr7 (101-196)||(16232148-16232243)
chr7 (101-196)||(20385561-20385656)
chr7 (101-196)||(21190034-21190129)
chr7 (101-196)||(26356389-26356484)
chr7 (101-196)||(26358841-26358936)
chr7 (101-196)||(32125127-32125222)
chr7 (101-196)||(41522553-41522648)
chr7 (101-196)||(41525015-41525110)
chr7 (101-195)||(16409696-16409790)
chr7 (101-196)||(14949560-14949655)
chr7 (101-196)||(455958-456053)
chr7 (101-196)||(11393706-11393801)
chr7 (101-196)||(27216503-27216598)
chr7 (101-154)||(16220141-16220194)
chr7 (176-218)||(11972223-11972265)
chr7 (176-218)||(14949514-14949556)
chr7 (176-218)||(15377106-15377148)
chr7 (176-218)||(16232247-16232289)
chr7 (176-218)||(20385515-20385557)
chr7 (176-218)||(21189988-21190030)
chr7 (101-154)||(12256243-12256296)
chr7 (101-150)||(12430352-12430401)
chr7 (101-154)||(15144438-15144491)
chr7 (101-150)||(18456810-18456859)
chr7 (102-150)||(44116181-44116229)
chr7 (104-150)||(26211647-26211693)
chr7 (104-150)||(29329362-29329408)
chr7 (189-218)||(456062-456091)
chr7 (101-154)||(2282672-2282725)
chr7 (101-146)||(15084642-15084687)
chr7 (189-218)||(16409800-16409829)
chr7 (189-218)||(32125231-32125260)
chr7 (189-218)||(41522657-41522686)
chr7 (189-218)||(41525119-41525148)
chr7 (174-218)||(18423415-18423459)
chr7 (106-150)||(38227138-38227182)
chr7 (102-150)||(38898824-38898872)
chr7 (126-154)||(47831470-47831498)
chr7 (104-148)||(48273022-48273066)
[»] chr3 (33 HSPs)
chr3 (101-218)||(45607300-45607425)
chr3 (101-218)||(55476150-55476275)
chr3 (101-196)||(7781747-7781842)
chr3 (101-196)||(9708045-9708140)
chr3 (101-196)||(16454711-16454806)
chr3 (101-196)||(17462806-17462901)
chr3 (101-196)||(34158954-34159049)
chr3 (101-218)||(10248115-10248240)
chr3 (101-218)||(13152184-13152309)
chr3 (103-218)||(13154649-13154772)
chr3 (101-196)||(55500579-55500674)
chr3 (101-196)||(29173053-29173149)
chr3 (101-154)||(15467548-15467601)
chr3 (176-218)||(29172999-29173041)
chr3 (101-157)||(10556652-10556708)
chr3 (176-218)||(9707999-9708041)
chr3 (176-218)||(17462905-17462947)
chr3 (176-218)||(34159053-34159095)
chr3 (101-150)||(8898723-8898772)
chr3 (101-150)||(24341101-24341150)
chr3 (182-218)||(7781701-7781737)
chr3 (102-150)||(17447138-17447186)
chr3 (102-150)||(41123525-41123573)
chr3 (123-154)||(12120360-12120391)
chr3 (120-154)||(10901592-10901626)
chr3 (104-150)||(53071106-53071152)
chr3 (101-154)||(14234122-14234175)
chr3 (101-150)||(24153606-24153655)
chr3 (101-154)||(43840603-43840656)
chr3 (101-154)||(53301949-53302002)
chr3 (101-141)||(13210739-13210779)
chr3 (7-35)||(15555350-15555378)
chr3 (102-150)||(16283295-16283343)
[»] scaffold0444 (2 HSPs)
scaffold0444 (101-196)||(13020-13115)
scaffold0444 (176-218)||(13119-13161)
[»] scaffold0254 (2 HSPs)
scaffold0254 (101-196)||(20375-20470)
scaffold0254 (176-218)||(20474-20516)
[»] scaffold0230 (1 HSPs)
scaffold0230 (101-196)||(13583-13678)
[»] scaffold0145 (2 HSPs)
scaffold0145 (101-196)||(9377-9472)
scaffold0145 (174-218)||(9474-9518)
[»] scaffold0134 (2 HSPs)
scaffold0134 (101-196)||(37450-37545)
scaffold0134 (176-218)||(37549-37591)
[»] scaffold0028 (10 HSPs)
scaffold0028 (101-196)||(136309-136404)
scaffold0028 (101-196)||(138778-138873)
scaffold0028 (101-196)||(143716-143811)
scaffold0028 (101-196)||(133840-133935)
scaffold0028 (101-196)||(141247-141342)
scaffold0028 (176-218)||(133939-133981)
scaffold0028 (176-218)||(136408-136450)
scaffold0028 (176-218)||(138877-138919)
scaffold0028 (176-218)||(141346-141388)
scaffold0028 (176-218)||(143815-143857)
[»] scaffold0023 (3 HSPs)
scaffold0023 (101-196)||(94039-94134)
scaffold0023 (176-218)||(94138-94180)
scaffold0023 (101-150)||(44083-44132)
[»] scaffold0003 (2 HSPs)
scaffold0003 (101-196)||(158870-158965)
scaffold0003 (176-218)||(158824-158866)
[»] chr4 (26 HSPs)
chr4 (101-196)||(12033570-12033665)
chr4 (101-196)||(15118791-15118886)
chr4 (101-196)||(18239858-18239953)
chr4 (101-196)||(44614916-44615011)
chr4 (101-196)||(50222778-50222873)
chr4 (106-196)||(14718405-14718495)
chr4 (101-196)||(1837942-1838037)
chr4 (101-196)||(3514674-3514769)
chr4 (101-196)||(29267291-29267386)
chr4 (101-154)||(14928163-14928216)
chr4 (101-154)||(23803791-23803844)
chr4 (101-154)||(43198976-43199029)
chr4 (176-218)||(14718359-14718401)
chr4 (176-218)||(15118745-15118787)
chr4 (176-218)||(18239812-18239854)
chr4 (176-218)||(29267390-29267432)
chr4 (176-218)||(50222732-50222774)
chr4 (101-154)||(14273-14326)
chr4 (101-154)||(7798436-7798489)
chr4 (102-150)||(12710-12758)
chr4 (102-150)||(52312140-52312188)
chr4 (104-154)||(39706718-39706768)
chr4 (104-150)||(44101926-44101972)
chr4 (101-154)||(12288633-12288686)
chr4 (101-154)||(14038364-14038417)
chr4 (174-218)||(7641575-7641619)
[»] chr1 (22 HSPs)
chr1 (101-196)||(13988538-13988633)
chr1 (101-196)||(21923730-21923825)
chr1 (101-196)||(23594166-23594261)
chr1 (101-196)||(21475518-21475613)
chr1 (101-196)||(41372742-41372837)
chr1 (176-218)||(13988637-13988679)
chr1 (176-218)||(21923684-21923726)
chr1 (101-158)||(21477294-21477351)
chr1 (101-154)||(21896678-21896731)
chr1 (101-150)||(29297766-29297815)
chr1 (101-150)||(31611945-31611994)
chr1 (101-154)||(33680661-33680714)
chr1 (101-157)||(21341783-21341839)
chr1 (101-157)||(21346647-21346703)
chr1 (182-218)||(21475480-21475516)
chr1 (102-150)||(22123551-22123599)
chr1 (102-150)||(40129247-40129295)
chr1 (123-154)||(21706854-21706885)
chr1 (123-154)||(21711396-21711427)
chr1 (101-150)||(13213309-13213358)
chr1 (101-154)||(16758298-16758351)
chr1 (120-152)||(52928386-52928418)
[»] scaffold0044 (2 HSPs)
scaffold0044 (104-196)||(40032-40124)
scaffold0044 (176-218)||(40128-40170)
[»] scaffold0716 (1 HSPs)
scaffold0716 (101-196)||(4352-4447)
[»] scaffold0221 (1 HSPs)
scaffold0221 (101-154)||(1606-1659)
[»] scaffold0106 (1 HSPs)
scaffold0106 (101-154)||(15632-15685)
[»] scaffold0100 (1 HSPs)
scaffold0100 (101-154)||(24297-24350)
[»] scaffold0530 (1 HSPs)
scaffold0530 (101-154)||(1463-1516)
[»] scaffold0394 (1 HSPs)
scaffold0394 (101-154)||(11692-11745)
[»] scaffold0243 (1 HSPs)
scaffold0243 (101-154)||(6313-6366)
[»] scaffold0171 (1 HSPs)
scaffold0171 (102-151)||(34221-34270)
[»] scaffold0112 (1 HSPs)
scaffold0112 (101-150)||(31956-32005)
[»] scaffold0075 (2 HSPs)
scaffold0075 (101-154)||(53971-54024)
scaffold0075 (102-150)||(52408-52456)
[»] scaffold0034 (1 HSPs)
scaffold0034 (105-154)||(32181-32230)
[»] scaffold0012 (2 HSPs)
scaffold0012 (105-154)||(5094-5143)
scaffold0012 (101-151)||(225132-225182)
[»] scaffold0001 (1 HSPs)
scaffold0001 (101-150)||(500743-500792)
[»] scaffold0697 (1 HSPs)
scaffold0697 (102-150)||(6232-6280)
[»] scaffold0013 (1 HSPs)
scaffold0013 (102-150)||(29966-30014)
[»] scaffold0357 (1 HSPs)
scaffold0357 (101-154)||(16485-16538)
[»] scaffold0333 (1 HSPs)
scaffold0333 (101-154)||(6261-6314)
[»] scaffold0074 (1 HSPs)
scaffold0074 (101-154)||(39101-39154)
[»] scaffold0007 (2 HSPs)
scaffold0007 (101-150)||(161536-161585)
scaffold0007 (101-150)||(165114-165163)


Alignment Details
Target: chr5 (Bit Score: 102; Significance: 8e-51; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 2155146 - 2155029
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttaacc 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  2155146 taataatatatcataattcacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 2155047  T
Q  201 tcttgactatgcaactta 218  Q
     |||||||||||||||||    
T  2155046 acttgactatgcaactta 2155029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 31143916 - 31144041
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactc--------gaca 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||    
T  31143916 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 31144015  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  31144016 acttaacctcttgactatgcaactta 31144041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 10733465 - 10733370
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10733465 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 10733370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 29345609 - 29345704
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29345609 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 29345704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 29348090 - 29348185
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29348090 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 29348185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 29350563 - 29350658
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29350563 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 29350658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 42245890 - 42245795
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42245890 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 42245795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 39363043 - 39363168
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactc--------gaca 192  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||    
T  39363043 taataatatatcataattcacttctttaataattcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 39363142  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  39363143 acttaacctcttgactatgcaactta 39363168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 20908640 - 20908735
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  20908640 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaactt 20908735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 265295 - 265207
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  265295 taataatatatcataattcacttctttaatagttcatat-------cacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 265207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 22411816 - 22411869
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||||||    
T  22411816 taataatatatcatatatcacatctttaatagttcatataaagaatcacaactt 22411869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 26012491 - 26012438
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||||||||||||||||||||||||||||    
T  26012491 taataatatatcatatatcacttcattaatagttcatataaagaatcacaactt 26012438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 265203 - 265161
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  265203 aacttgacaacttgacaacttaacctcttgactatgcaactta 265161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 20908739 - 20908781
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  20908739 aacttgacaacttgacaacttaacctcttgactatgcaactta 20908781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 29345708 - 29345750
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  29345708 aacttgacaacttgacaacttaacctcttgactatgcaactta 29345750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 20918479 - 20918431
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  20918479 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 20918431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 21329965 - 21329913
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaact 153  Q
    ||||||||||||||   | ||||| ||||||||||||||||||||||||||||    
T  21329965 taataatatatcatttatcacttcattaatagttcatataaagaatcacaact 21329913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 29329564 - 29329612
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  29329564 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 29329612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 21808858 - 21808812
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||    
T  21808858 taatatatcatatataacatctttaatagttcatataaagaatcaca 21808812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 29348194 - 29348223
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  29348194 gacaacttaacctcttgactatgcaactta 29348223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 29350667 - 29350696
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  29350667 gacaacttaacctcttgactatgcaactta 29350696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 8e-51; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 24530063 - 24529946
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttaacc 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  24530063 taataatatatcataattcacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 24529964  T
Q  201 tcttgactatgcaactta 218  Q
     |||||||||||||||||    
T  24529963 acttgactatgcaactta 24529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 571033 - 571128
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  571033 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 571128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 18808571 - 18808666
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18808571 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 18808666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 23130506 - 23130601
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23130506 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 23130601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 23132973 - 23133068
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23132973 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 23133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 23710066 - 23709971
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23710066 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 23709971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 24898737 - 24898642
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24898737 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 24898642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 24901212 - 24901117
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24901212 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 24901117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 24903689 - 24903594
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24903689 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 24903594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 24906166 - 24906071
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24906166 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 24906071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 24908641 - 24908546
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24908641 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 24908546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 34403033 - 34402938
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34403033 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 34402938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 39681942 - 39682035
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaac 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39681942 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaac 39682035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 26507486 - 26507581
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26507486 taataatatatcataattcacttctttaatagttcatataaataatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 26507581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 23135220 - 23135314
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23135220 taataatatatcataattcacttctttaatagttcatataaagaa-cacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 23135314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 26505008 - 26505103
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  26505008 taataatatatcataattcacttctttaatagttcatataaataatcgcagttttaaacaatttcatgatttaacaacttaacaactcgacaactt 26505103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 32040024 - 32039929
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||| || |||||    
T  32040024 taataatatatcataattcacttctttaatagtttatataaagaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataactt 32039929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 8208 - 8155
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  ||||||| |||| ||||||||||||||||||||||||    
T  8208 taataatatatcatatattacttcattaacagttcatataaagaatcacaactt 8155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 24898632 - 24898588
Alignment:
Q  174 acaacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||    
T  24898632 acaacttgacaacttgacaacttaacctcttgactatgcaactta 24898588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 23130605 - 23130648
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaacttag 219  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  23130605 aacttgacaacttgacaacttaacctcttgactatgcaacttag 23130648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 23133072 - 23133115
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaacttag 219  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  23133072 aacttgacaacttgacaacttaacctcttgactatgcaacttag 23133115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 18808670 - 18808712
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  18808670 aacttgacaacttgacaacttaacctcttgactatgcaactta 18808712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 23135318 - 23135360
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  23135318 aacttgacaacttgacaacttaacctcttgactatgcaactta 23135360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 23709967 - 23709925
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  23709967 aacttgacaacttgacaacttaacctcttgactatgcaactta 23709925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 24901113 - 24901071
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  24901113 aacttgacaacttgacaacttaacctcttgactatgcaactta 24901071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 24903590 - 24903548
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  24903590 aacttgacaacttgacaacttaacctcttgactatgcaactta 24903548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 24906067 - 24906025
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  24906067 aacttgacaacttgacaacttaacctcttgactatgcaactta 24906025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 24908542 - 24908500
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  24908542 aacttgacaacttgacaacttaacctcttgactatgcaactta 24908500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 26505107 - 26505149
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  26505107 aacttgacaacttgacaacttaacctcttgactatgcaactta 26505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 26507585 - 26507627
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  26507585 aacttgacaacttgacaacttaacctcttgactatgcaactta 26507627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 39682041 - 39682083
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  39682041 aacttgacaacttgacaacttaacctcttgactatgcaactta 39682083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 24688765 - 24688712
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||||||||||||||||||||| ||||||    
T  24688765 taataatatatcatatatcacttcattaatagttcatataaagaatcgcaactt 24688712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 38966905 - 38966954
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  38966905 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 38966954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 6725625 - 6725673
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  6725625 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 6725673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 21177878 - 21177830
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  21177878 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 21177830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 23712545 - 23712497
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  23712545 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 23712497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 32452384 - 32452338
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||    
T  32452384 taatatatcatatatcacatctttaatagttcatataaagaatcaca 32452338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 571137 - 571166
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  571137 gacaacttaacctcttgactatgcaactta 571166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 154
Target Start/End: Original strand, 7679287 - 7679315
Alignment:
Q  126 ttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||||||||||||||||    
T  7679287 ttaatagttcatataaagaatcacaactt 7679315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 24643482 - 24643434
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||| ||||||||||||||    
T  24643482 aataatatatcatatatcacatctttaatagttcgtataaagaatcaca 24643434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 8e-45; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 26925173 - 26925078
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26925173 taataatatatcataattcacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 26925078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 1541436 - 1541341
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1541436 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 1541341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 2291714 - 2291619
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2291714 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 2291619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 8054657 - 8054752
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8054657 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 8054752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 12741954 - 12742049
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12741954 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 12742049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 18335126 - 18335031
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18335126 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 18335031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 19004674 - 19004769
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19004674 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 19004769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 24422175 - 24422270
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24422175 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 24422270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 33861423 - 33861518
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33861423 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 33861518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 33863906 - 33864001
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33863906 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 33864001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 22781901 - 22781995
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22781901 aataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 22781995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 25591290 - 25591198
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaa 193  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25591290 taataatatatcataattcacttctttagtagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaa 25591198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 25688204 - 25688298
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaact 195  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25688204 taataacatatcataattcacttcattaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact 25688298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 25656431 - 25656526
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25656431 taataacatatcataattcacttctttaatagttcgtataaagaataacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 25656526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 25714114 - 25714190
Alignment:
Q  120 acttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||    
T  25714114 acttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaactcgacaacttgacaactt 25714190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 25722424 - 25722493
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgat 170  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  25722424 taataacatatcataattcacttctttaatagttcatataaagaatcacagctttaaacagtttcatgat 25722493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 25591191 - 25591149
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  25591191 aacttgacaactcgacaacttaacctcttgactatgcaactta 25591149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 2291615 - 2291573
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  2291615 aacttgacaacttgacaacttaacctcttgactatgcaactta 2291573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 8054756 - 8054798
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  8054756 aacttgacaacttgacaacttaacctcttgactatgcaactta 8054798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 18335027 - 18334985
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  18335027 aacttgacaacttgacaacttaacctcttgactatgcaactta 18334985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 18456371 - 18456421
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||||||    
T  18456371 taatatatcatatatcacatctttaatagttcatataaagaatcacaactt 18456421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 19004773 - 19004815
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  19004773 aacttgacaacttgacaacttaacctcttgactatgcaactta 19004815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 22781999 - 22782041
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  22781999 aacttgacaacttgacaacttaacctcttgactatgcaactta 22782041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 24422274 - 24422316
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  24422274 aacttgacaacttgacaacttaacctcttgactatgcaactta 24422316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 26925074 - 26925032
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  26925074 aacttgacaacttgacaacttaacctcttgactatgcaactta 26925032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 33861522 - 33861564
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  33861522 aacttgacaacttgacaacttaacctcttgactatgcaactta 33861564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 33864005 - 33864047
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  33864005 aacttgacaacttgacaacttaacctcttgactatgcaactta 33864047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 23019047 - 23019100
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| ||||||||| |||||||||||||||||||    
T  23019047 taataatatatcatatatcacttcattaatagtttatataaagaatcacaactt 23019100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 25643982 - 25644035
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  |  |||| |||||||||||||||||||||||||||||    
T  25643982 taataatatatcatatatcgcttcattaatagttcatataaagaatcacaactt 25644035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 1595179 - 1595227
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  1595179 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 1595227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 154
Target Start/End: Complemental strand, 20557404 - 20557373
Alignment:
Q  123 tctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||||||||||||||||||||    
T  20557404 tctttaatagttcatataaagaatcacaactt 20557373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 18461531 - 18461577
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||    
T  18461531 taatatatcatatatcacatctttaatagttcatataaagaatcaca 18461577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 12742058 - 12742087
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  12742058 gacaacttaacctcttgactatgcaactta 12742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 20108781 - 20108834
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||| |||| |||||||||||||||||||    
T  20108781 taataatatatcatatatcacttcattaacagtttatataaagaatcacaactt 20108834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 30677168 - 30677120
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||   | || ||||||||||||||||||||||||||||    
T  30677168 aataatatatcatttatcacatctttaatagttcatataaagaatcaca 30677120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 4482940 - 4483065
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactc--------gaca 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||    
T  4482940 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 4483039  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  4483040 acttaacctcttgactatgcaactta 4483065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 1484030 - 1484125
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1484030 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 1484125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 4542906 - 4542811
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4542906 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 4542811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 5853825 - 5853730
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5853825 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 5853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 14823403 - 14823498
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14823403 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 14823498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 18678558 - 18678463
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18678558 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 18678463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 18717747 - 18717652
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18717747 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 18717652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 20402855 - 20402950
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20402855 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 20402950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 22001389 - 22001477
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| |||||||||||| |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22001389 taataatatatcataattcacttctttaataattcatat-------cacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 22001477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 18678461 - 18678416
Alignment:
Q  174 acaacttaacaactcgacaacttaacctcttgactatgcaacttag 219  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18678461 acaacttgacaactcgacaacttaacctcttgactatgcaacttag 18678416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 18717650 - 18717605
Alignment:
Q  174 acaacttaacaactcgacaacttaacctcttgactatgcaacttag 219  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18717650 acaacttgacaactcgacaacttaacctcttgactatgcaacttag 18717605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 1484129 - 1484171
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  1484129 aacttgacaacttgacaacttaacctcttgactatgcaactta 1484171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 4542807 - 4542765
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  4542807 aacttgacaacttgacaacttaacctcttgactatgcaactta 4542765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 5853726 - 5853684
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  5853726 aacttgacaacttgacaacttaacctcttgactatgcaactta 5853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 14823502 - 14823544
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  14823502 aacttgacaacttgacaacttaacctcttgactatgcaactta 14823544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 20402954 - 20402996
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  20402954 aacttgacaacttgacaacttaacctcttgactatgcaactta 20402996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 22001481 - 22001523
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  22001481 aacttgacaacttgacaacttaacctcttgactatgcaactta 22001523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 983881 - 983828
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||| ||||||||||||||||||||||||    
T  983881 taataatatatcatatatcacttcattaacagttcatataaagaatcacaactt 983828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 13508555 - 13508506
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | ||||| |||||||||||||||||||||||||    
T  13508555 taataatatatcatatatcacttcattaatagttcatataaagaatcaca 13508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 15203764 - 15203715
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  15203764 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 15203715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 19895894 - 19895943
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  19895894 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 19895943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 21673303 - 21673356
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||| | | ||||| |||||| ||||||||||||||||||||||    
T  21673303 taataatatatcattaatcacttcattaataattcatataaagaatcacaactt 21673356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 38855684 - 38855631
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||   | ||||| |||||||||||||||||||||||||||||    
T  38855684 taataatatatcatttatcacttcattaatagttcatataaagaatcacaactt 38855631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 45291226 - 45291173
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcacaactttaa 157  Q
    ||||||||||||  | || |||||||||||||||||||||||||||| ||||||    
T  45291226 taatatatcatatatcacatctttaatagttcatataaagaatcacagctttaa 45291173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 6520018 - 6520071
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||   | ||||| ||||||||| |||||||||||||||||||    
T  6520018 taataatatatcatttatcacttcattaatagtttatataaagaatcacaactt 6520071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 17612562 - 17612513
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || || |||||||||||||||||||||||||    
T  17612562 taataatatatcatatatcacatcattaatagttcatataaagaatcaca 17612513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 41597818 - 41597866
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||| ||||||||||||    
T  41597818 aataatatatcatatatcacatctttaatagttcatttaaagaatcaca 41597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 24701883 - 24702008
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactc--------gaca 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||    
T  24701883 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 24701982  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  24701983 acttaacctcttgactatgcaactta 24702008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 24704333 - 24704458
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactc--------gaca 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||    
T  24704333 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 24704432  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  24704433 acttaacctcttgactatgcaactta 24704458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 11972124 - 11972219
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11972124 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 11972219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 15377247 - 15377152
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15377247 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 15377152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 16232148 - 16232243
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16232148 taataatatatcataattaacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 16232243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 20385656 - 20385561
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20385656 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 20385561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 21190129 - 21190034
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21190129 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 21190034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 26356484 - 26356389
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26356484 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 26356389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 26358936 - 26358841
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26358936 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 26358841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 32125127 - 32125222
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32125127 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 32125222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 41522553 - 41522648
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41522553 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 41522648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 41525015 - 41525110
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41525015 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 41525110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 16409696 - 16409790
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaact 195  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16409696 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact 16409790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 14949655 - 14949560
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  14949655 taataatatatcataattcacttctttaatagttcatataaagaatcatagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 14949560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 455958 - 456053
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  455958 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaacttgataactt 456053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 11393801 - 11393706
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||    
T  11393801 taataatatatcataattcacttctttaatagttcatataaagaatcatagctttaaacaatttcatgatttaacaacttaacaacttgacaactt 11393706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 27216503 - 27216598
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||| || |||||    
T  27216503 taataatatatcataattcacttctttaatagttcatataaataatcacagctttaaacaatttcatgatttaacaacttgacaacttgataactt 27216598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 16220194 - 16220141
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||||||||||||||||||||||||||||    
T  16220194 taataatatatcatatatcacttcattaatagttcatataaagaatcacaactt 16220141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 11972223 - 11972265
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  11972223 aacttgacaacttgacaacttaacctcttgactatgcaactta 11972265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 14949556 - 14949514
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  14949556 aacttgacaacttgacaacttaacctcttgactatgcaactta 14949514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 15377148 - 15377106
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  15377148 aacttgacaacttgacaacttaacctcttgactatgcaactta 15377106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 16232247 - 16232289
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  16232247 aacttgacaacttgacaacttaacctcttgactatgcaactta 16232289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 20385557 - 20385515
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  20385557 aacttgacaacttgacaacttaacctcttgactatgcaactta 20385515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 21190030 - 21189988
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  21190030 aacttgacaacttgacaacttaacctcttgactatgcaactta 21189988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 12256296 - 12256243
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||| ||||||||||  | ||||| |||||||||||||||||||||||||||||    
T  12256296 taatcatatatcatatatcacttcattaatagttcatataaagaatcacaactt 12256243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 12430352 - 12430401
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  12430352 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 12430401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 15144491 - 15144438
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||||| ||||| | || | ||||||||||||||||||||||    
T  15144491 taataatatatcataattcacttcatcaacaattcatataaagaatcacaactt 15144438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 18456859 - 18456810
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  18456859 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 18456810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 44116181 - 44116229
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  44116181 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 44116229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 26211647 - 26211693
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||    
T  26211647 taatatatcatatatcacatctttaatagttcatataaagaatcaca 26211693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 29329408 - 29329362
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||    
T  29329408 taatatatcatatatcacatctttaatagttcatataaagaatcaca 29329362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 456062 - 456091
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  456062 gacaacttaacctcttgactatgcaactta 456091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 2282725 - 2282672
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||| |  | ||||| |||| ||||||||||||||||||||||||    
T  2282725 taataatatatcacatatcacttcattaacagttcatataaagaatcacaactt 2282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 15084687 - 15084642
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaat 146  Q
    |||||||||||||||  | || ||||||||||||||||||||||||    
T  15084687 taataatatatcatatatcacatctttaatagttcatataaagaat 15084642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 16409800 - 16409829
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  16409800 gacaacttaacctcttgactatgcaactta 16409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 32125231 - 32125260
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  32125231 gacaacttaacctcttgactatgcaactta 32125260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 41522657 - 41522686
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  41522657 gacaacttaacctcttgactatgcaactta 41522686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 41525119 - 41525148
Alignment:
Q  189 gacaacttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||||||    
T  41525119 gacaacttaacctcttgactatgcaactta 41525148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 18423415 - 18423459
Alignment:
Q  174 acaacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    |||||||| |||||||||||||| ||  |||||||||||||||||    
T  18423415 acaacttatcaactcgacaacttgacaacttgactatgcaactta 18423459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 38227138 - 38227182
Alignment:
Q  106 atatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||  | || ||||||||||||||||||||||||||||    
T  38227138 atatatcatatatcacatctttaatagttcatataaagaatcaca 38227182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 38898872 - 38898824
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||| ||||||||||||||||||    
T  38898872 aataatatatcatatatcacatctttaataattcatataaagaatcaca 38898824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 154
Target Start/End: Original strand, 47831470 - 47831498
Alignment:
Q  126 ttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||||||||||||||||    
T  47831470 ttaatagttcatataaagaatcacaactt 47831498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 48273022 - 48273066
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatca 148  Q
    ||||||||||||  | || ||||||||||||||||||||||||||    
T  48273022 taatatatcatatatcacatctttaatagttcatataaagaatca 48273066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 45607425 - 45607300
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgaca-------- 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||            
T  45607425 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 45607326  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  45607325 acttaacctcttgactatgcaactta 45607300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 55476150 - 55476275
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactc--------gaca 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||    
T  55476150 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 55476249  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  55476250 acttaacctcttgactatgcaactta 55476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 7781842 - 7781747
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7781842 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 7781747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 9708140 - 9708045
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9708140 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 9708045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 16454806 - 16454711
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16454806 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 16454711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 17462806 - 17462901
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17462806 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 17462901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 34158954 - 34159049
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34158954 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 34159049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 10248240 - 10248115
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgaca-------- 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||            
T  10248240 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttcaacaatttcatgatttaacaacttaacaactcgacaacttgaca 10248141  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  10248140 acttaacctcttgactatgcaactta 10248115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 13152309 - 13152184
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgaca-------- 192  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||            
T  13152309 taataatatatcataattcacttctttaatagttcatataaagtatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgaca 13152210  T
Q  193 acttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||||    
T  13152209 acttaacctcttgactatgcaactta 13152184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 13154772 - 13154649
Alignment:
Q  103 ataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgaca--------ac 194  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||        ||    
T  13154772 ataatatatcataattcacttctttaatagttcatataaagtatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaac 13154673  T
Q  195 ttaacctcttgactatgcaactta 218  Q
    ||||||||||||||||||||||||    
T  13154672 ttaacctcttgactatgcaactta 13154649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 55500579 - 55500674
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  55500579 taataatatatcataattcacttatttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaactt 55500674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 29173149 - 29173053
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaac-ttaacaactcgacaactt 196  Q
    |||||||||||||||  | || ||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  29173149 taataatatatcatatatcacatctttaatagttcatataaggaatcacagctttaaacaatttcataatttaacaacattaacaactcgacaactt 29173053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 15467548 - 15467601
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  15467548 taataatatatcataattcacttcattaataattcatataaagaatcacaactt 15467601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 29173041 - 29172999
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  29173041 aacttgacaactcgacaacttaacctcttgactatgcaactta 29172999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 10556652 - 10556708
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaa 157  Q
    |||||||||||||||  | ||||| ||||||||||||||||||||||||| ||||||    
T  10556652 taataatatatcatatatcacttcattaatagttcatataaagaatcacagctttaa 10556708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 9708041 - 9707999
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  9708041 aacttgacaacttgacaacttaacctcttgactatgcaactta 9707999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 17462905 - 17462947
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  17462905 aacttgacaacttgacaacttaacctcttgactatgcaactta 17462947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 34159053 - 34159095
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  34159053 aacttgacaacttgacaacttaacctcttgactatgcaactta 34159095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 8898723 - 8898772
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  8898723 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 8898772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 24341150 - 24341101
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | ||||| |||||||||||||||||||||||||    
T  24341150 taataatatatcatatatcacttcattaatagttcatataaagaatcaca 24341101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 7781737 - 7781701
Alignment:
Q  182 acaactcgacaacttaacctcttgactatgcaactta 218  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7781737 acaacttgacaacttaacctcttgactatgcaactta 7781701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 17447186 - 17447138
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  17447186 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 17447138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 41123525 - 41123573
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  41123525 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 41123573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 154
Target Start/End: Complemental strand, 12120391 - 12120360
Alignment:
Q  123 tctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||||||||||||||||||||    
T  12120391 tctttaatagttcatataaagaatcacaactt 12120360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 10901626 - 10901592
Alignment:
Q  120 acttctttaatagttcatataaagaatcacaactt 154  Q
    ||||| |||||||||||||||||||||||||||||    
T  10901626 acttcattaatagttcatataaagaatcacaactt 10901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 53071152 - 53071106
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||    
T  53071152 taatatatcatatatcacatctttaatagttcatataaagaatcaca 53071106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 14234122 - 14234175
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||   | ||||| ||||| |||||||||||||||||||||||    
T  14234122 taataatatatcatttatcacttcattaatggttcatataaagaatcacaactt 14234175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 24153655 - 24153606
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||| ||||||||  | || ||||||||||||||||||||||||||||    
T  24153655 taataagatatcatatatcacatctttaatagttcatataaagaatcaca 24153606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 43840603 - 43840656
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||| ||||||| |||| | |||||||||  |||||||||||    
T  43840603 taataatatatcataaattacttcgttaacaattcatataagtaatcacaactt 43840656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 53302002 - 53301949
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | || || ||||||||||| |||||||||||||||||    
T  53302002 taataatatatcatatatcacatcattaatagttcaaataaagaatcacaactt 53301949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 13210779 - 13210739
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataa 141  Q
    |||||| ||||||||||||||||| || |||||||||||||    
T  13210779 taataacatatcataatttacttcattcatagttcatataa 13210739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 15555350 - 15555378
Alignment:
Q  7 acatcatcaagtacatttaacaacataag 35  Q
    |||||||||||||||||||||||||||||    
T  15555350 acatcatcaagtacatttaacaacataag 15555378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 16283343 - 16283295
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||| ||||||||  | || ||||||||||||||||||||||||||||    
T  16283343 aataagatatcatatatcacatctttaatagttcatataaagaatcaca 16283295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 13020 - 13115
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13020 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 13115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 13119 - 13161
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  13119 aacttgacaacttgacaacttaacctcttgactatgcaactta 13161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 20375 - 20470
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20375 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 20470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 20474 - 20516
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  20474 aacttgacaacttgacaacttaacctcttgactatgcaactta 20516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 13583 - 13678
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13583 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 13678  T

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Target: scaffold0145 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 9377 - 9472
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9377 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 9472  T

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Target: scaffold0145; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 9474 - 9518
Alignment:
Q  174 acaacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||    
T  9474 acaacttgacaacttgacaacttaacctcttgactatgcaactta 9518  T

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Target: scaffold0134 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 37450 - 37545
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37450 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 37545  T

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Target: scaffold0134; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 37549 - 37591
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  37549 aacttgacaacttgacaacttaacctcttgactatgcaactta 37591  T

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Target: scaffold0028 (Bit Score: 88; Significance: 2e-42; HSPs: 10)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 136309 - 136404
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  136309 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 136404  T

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Target: scaffold0028; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 138778 - 138873
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  138778 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 138873  T

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Target: scaffold0028; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 143716 - 143811
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  143716 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 143811  T

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Target: scaffold0028; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 133840 - 133935
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  133840 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaactt 133935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 141247 - 141342
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  141247 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaactt 141342  T

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Target: scaffold0028; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 133939 - 133981
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  133939 aacttgacaacttgacaacttaacctcttgactatgcaactta 133981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 136408 - 136450
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  136408 aacttgacaacttgacaacttaacctcttgactatgcaactta 136450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 138877 - 138919
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  138877 aacttgacaacttgacaacttaacctcttgactatgcaactta 138919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 141346 - 141388
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  141346 aacttgacaacttgacaacttaacctcttgactatgcaactta 141388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 143815 - 143857
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  143815 aacttgacaacttgacaacttaacctcttgactatgcaactta 143857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 94039 - 94134
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  94039 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 94134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 94138 - 94180
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  94138 aacttgacaacttgacaacttaacctcttgactatgcaactta 94180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 44083 - 44132
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  44083 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 44132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 158965 - 158870
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  158965 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 158866 - 158824
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  158866 aacttgacaactcgacaacttaacctcttgactatgcaactta 158824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 12033665 - 12033570
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12033665 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 12033570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 15118886 - 15118791
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15118886 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 15118791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 18239953 - 18239858
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18239953 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 18239858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 44614916 - 44615011
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44614916 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 44615011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 50222873 - 50222778
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50222873 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 50222778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 14718495 - 14718405
Alignment:
Q  106 atatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14718495 atatatcataattcacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 14718405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 1838037 - 1837942
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  1838037 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaccaactcgacaactt 1837942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 3514674 - 3514769
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3514674 taataacatatcataattcacttatttaatagttcatataaagaatcacaactttaaacaatttcatgatttaactacttaacaactcgacaactt 3514769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 29267291 - 29267386
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  29267291 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaagcaatttcatgatttaactacttaacaactcgacaactt 29267386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 14928216 - 14928163
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | |||||||||||| ||||||||||||||||||||||    
T  14928216 taataatatatcatatatcacttctttaataattcatataaagaatcacaactt 14928163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 23803844 - 23803791
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||||||    
T  23803844 taataatatatcatatatcacatctttaatagttcatataaagaatcacaactt 23803791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 43199029 - 43198976
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||||||||||||||||||||||||||||    
T  43199029 taataatatatcatatatcacttcattaatagttcatataaagaatcacaactt 43198976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 14718401 - 14718359
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  14718401 aacttgacaacttgacaacttaacctcttgactatgcaactta 14718359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 15118787 - 15118745
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  15118787 aacttgacaacttgacaacttaacctcttgactatgcaactta 15118745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 18239854 - 18239812
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  18239854 aacttgacaacttgacaacttaacctcttgactatgcaactta 18239812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 29267390 - 29267432
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  29267390 aacttgacaacttgacaacttaacctcttgactatgcaactta 29267432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 50222774 - 50222732
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  50222774 aacttgacaacttgacaacttaacctcttgactatgcaactta 50222732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 14326 - 14273
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||| ||||||||||||||||||||||||    
T  14326 taataatatatcatatatcacttcattaacagttcatataaagaatcacaactt 14273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 7798436 - 7798489
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||||| ||||| |||| | |||||||||||||| |||||||    
T  7798436 taataatatatcataattcacttcgttaacaattcatataaagaattacaactt 7798489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 12758 - 12710
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  12758 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 12710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 52312140 - 52312188
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  52312140 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 52312188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 39706768 - 39706718
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||   | ||||| |||||||||||||||||||||||||||||    
T  39706768 taatatatcatttatcacttcattaatagttcatataaagaatcacaactt 39706718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 44101926 - 44101972
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||  | || ||||||||||||||||||||||||||||    
T  44101926 taatatatcatatatcacatctttaatagttcatataaagaatcaca 44101972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 12288686 - 12288633
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||| || |||||||||||||||||||||    
T  12288686 taataatatatcatatatcacttcattaacagctcatataaagaatcacaactt 12288633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 14038364 - 14038417
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||| |||||||| | ||||| |||| | ||||||||||||||||||||||    
T  14038364 taataatgtatcataaatcacttcgttaacaattcatataaagaatcacaactt 14038417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 7641619 - 7641575
Alignment:
Q  174 acaacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    |||||||| |||||||||||||| ||  |||||||||||||||||    
T  7641619 acaacttatcaactcgacaacttgacaacttgactatgcaactta 7641575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 13988538 - 13988633
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13988538 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 13988633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 21923825 - 21923730
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21923825 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 21923730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 23594261 - 23594166
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23594261 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 23594166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 21475613 - 21475518
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| || |||||    
T  21475613 taataatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataactt 21475518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 41372742 - 41372837
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| || |||||    
T  41372742 taataatatatcataattcccttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataactt 41372837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 13988637 - 13988679
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  13988637 aacttgacaacttgacaacttaacctcttgactatgcaactta 13988679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 21923726 - 21923684
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  21923726 aacttgacaacttgacaacttaacctcttgactatgcaactta 21923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 21477294 - 21477351
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaa 158  Q
    |||||||||||||||  | || || ||||||||||||||||||||||||| |||||||    
T  21477294 taataatatatcatatatcacatcattaatagttcatataaagaatcacagctttaaa 21477351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 21896731 - 21896678
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||| ||||||||||||||||||||||||    
T  21896731 taataatatatcatatatcacttcattaacagttcatataaagaatcacaactt 21896678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 29297766 - 29297815
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  29297766 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 29297815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 31611945 - 31611994
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  31611945 taataatatatcatatatcacgtctttaatagttcatataaagaatcaca 31611994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 33680661 - 33680714
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||| | ||||| || ||| ||||||||||||||||||||||    
T  33680661 taataatatatcataaatcacttcattcataattcatataaagaatcacaactt 33680714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 21341783 - 21341839
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaa 157  Q
    |||||||||||||||  | || || ||||||||||||||||||||||||| ||||||    
T  21341783 taataatatatcatatatcacatcattaatagttcatataaagaatcacagctttaa 21341839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 21346647 - 21346703
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaa 157  Q
    |||||||||||||||  | || || ||||||||||||||||||||||||| ||||||    
T  21346647 taataatatatcatatatcacatcattaatagttcatataaagaatcacagctttaa 21346703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 21475516 - 21475480
Alignment:
Q  182 acaactcgacaacttaacctcttgactatgcaactta 218  Q
    |||||| ||||||||||||||||||||||||||||||    
T  21475516 acaacttgacaacttaacctcttgactatgcaactta 21475480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 22123599 - 22123551
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  22123599 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 22123551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 40129247 - 40129295
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  40129247 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 40129295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 154
Target Start/End: Original strand, 21706854 - 21706885
Alignment:
Q  123 tctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||||||||||||||||||||    
T  21706854 tctttaatagttcatataaagaatcacaactt 21706885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 154
Target Start/End: Original strand, 21711396 - 21711427
Alignment:
Q  123 tctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||||||||||||||||||||    
T  21711396 tctttaatagttcatataaagaatcacaactt 21711427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 13213358 - 13213309
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || || |||||||||||||||||||||||||    
T  13213358 taataatatatcatatatcacatcattaatagttcatataaagaatcaca 13213309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 16758298 - 16758351
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||  |||| ||||||||||||||||||||||||    
T  16758298 taataatatatcatatatcactttattaacagttcatataaagaatcacaactt 16758351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 52928418 - 52928386
Alignment:
Q  120 acttctttaatagttcatataaagaatcacaac 152  Q
    ||||| |||||||||||||||||||||||||||    
T  52928418 acttcattaatagttcatataaagaatcacaac 52928386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 40032 - 40124
Alignment:
Q  104 taatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40032 taatatatcataattcacttctttaatagttcatataaagaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactt 40124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 40128 - 40170
Alignment:
Q  176 aacttaacaactcgacaacttaacctcttgactatgcaactta 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  40128 aacttgacaacttgacaacttaacctcttgactatgcaactta 40170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 4352 - 4447
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaactt 196  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  4352 taataacatatcataattcacttctttaatagttcatataaagaatcacaactttaaaaaatttcatgatttaactacttaacaactcgacaactt 4447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 1606 - 1659
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  1606 taataatatatcatatatcacttctttaatggttcatataaagaatcacaactt 1659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 15685 - 15632
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||||||    
T  15685 taataatatatcatatatcacatctttaatagttcatataaagaatcacaactt 15632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 24350 - 24297
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||||| | ||| |||||| ||||||||||||||||||||||    
T  24350 taataatatatcataattcaattcattaataattcatataaagaatcacaactt 24297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 1516 - 1463
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||   | ||||| |||||||||||||||||||||||||||||    
T  1516 taataatatatcatttatcacttcattaatagttcatataaagaatcacaactt 1463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 11692 - 11745
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | || |||||||||||||| |||||||||||||||||    
T  11692 taataatatatcatatatcacatctttaatagttcaaataaagaatcacaactt 11745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 6366 - 6313
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||   | ||||| |||||||||||||||||||||||||||||    
T  6366 taataatatatcatttatcacttcattaatagttcatataaagaatcacaactt 6313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 34221 - 34270
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcacaa 151  Q
    ||||||||||||||  | || |||||||||||||||||||||||||||||    
T  34221 aataatatatcatatatcacatctttaatagttcatataaagaatcacaa 34270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 32005 - 31956
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  32005 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 31956  T

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Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 54024 - 53971
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | ||||| |||| ||||||||||||||||||||||||    
T  54024 taataatatatcatatatcacttcattaacagttcatataaagaatcacaactt 53971  T

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Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 52456 - 52408
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  52456 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 52408  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 32181 - 32230
Alignment:
Q  105 aatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||  | ||||| |||||||||||||||||||||||||||||    
T  32181 aatatatcatatatcacttcattaatagttcatataaagaatcacaactt 32230  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 5143 - 5094
Alignment:
Q  105 aatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  5143 aatatatcataaatcacttcattaataattcatataaagaatcacaactt 5094  T

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Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 225132 - 225182
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaa 151  Q
    |||||||||||||||  | ||||| |||| |||||||||||||||||||||    
T  225132 taataatatatcatatatcacttcattaacagttcatataaagaatcacaa 225182  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 500743 - 500792
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || ||||||||||||||||||||||||||||    
T  500743 taataatatatcatatatcacatctttaatagttcatataaagaatcaca 500792  T

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Target: scaffold0697 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 6232 - 6280
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  6232 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 6280  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 29966 - 30014
Alignment:
Q  102 aataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  29966 aataatatatcatatatcacatctttaatagttcatataaagaatcaca 30014  T

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Target: scaffold0357 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 16538 - 16485
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||    ||||| |||| ||||||||||||||||||||||||    
T  16538 taataatatatcatacaacacttcattaacagttcatataaagaatcacaactt 16485  T

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Target: scaffold0333 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 6261 - 6314
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    ||||||||||||||   | ||||| || ||||||||||||||||||||||||||    
T  6261 taataatatatcatttatcacttcattcatagttcatataaagaatcacaactt 6314  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 39154 - 39101
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcacaactt 154  Q
    |||||||||||||||  | || || ||||||||||| |||||||||||||||||    
T  39154 taataatatatcatatatcacatcattaatagttcaaataaagaatcacaactt 39101  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 161585 - 161536
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || || |||||||||||||||||||||||||    
T  161585 taataatatatcatatatcacatcattaatagttcatataaagaatcaca 161536  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 165163 - 165114
Alignment:
Q  101 taataatatatcataatttacttctttaatagttcatataaagaatcaca 150  Q
    |||||||||||||||  | || || |||||||||||||||||||||||||    
T  165163 taataatatatcatatatcacatcattaatagttcatataaagaatcaca 165114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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