View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17999_low_22 (Length: 204)

Name: NF17999_low_22
Description: NF17999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17999_low_22
NF17999_low_22
[»] chr1 (66 HSPs)
chr1 (14-142)||(48947192-48947320)
chr1 (19-142)||(16113912-16114037)
chr1 (24-142)||(33791729-33791847)
chr1 (19-141)||(39973885-39974007)
chr1 (19-135)||(35259043-35259159)
chr1 (24-110)||(31042999-31043085)
chr1 (24-140)||(4040891-4041007)
chr1 (24-140)||(40286856-40286972)
chr1 (19-142)||(34861202-34861325)
chr1 (19-125)||(3047860-3047966)
chr1 (46-142)||(38172665-38172761)
chr1 (26-134)||(40053293-40053401)
chr1 (19-123)||(42573778-42573882)
chr1 (24-142)||(49478810-49478929)
chr1 (36-136)||(290601-290701)
chr1 (23-135)||(24034054-24034166)
chr1 (26-134)||(35543401-35543509)
chr1 (27-118)||(48900-48991)
chr1 (37-139)||(51904562-51904664)
chr1 (37-137)||(1656447-1656548)
chr1 (24-128)||(10355031-10355135)
chr1 (24-137)||(46804819-46804932)
chr1 (26-137)||(759221-759333)
chr1 (46-141)||(30548293-30548387)
chr1 (47-142)||(31652643-31652738)
chr1 (47-134)||(40203076-40203163)
chr1 (26-111)||(31807800-31807886)
chr1 (24-142)||(40341599-40341718)
chr1 (52-126)||(9931801-9931875)
chr1 (24-140)||(290841-290957)
chr1 (24-112)||(26700247-26700335)
chr1 (48-135)||(44461597-44461683)
chr1 (37-126)||(32787261-32787351)
chr1 (77-142)||(12148289-12148354)
chr1 (24-125)||(31398418-31398519)
chr1 (58-127)||(45753482-45753551)
chr1 (37-140)||(24075110-24075214)
chr1 (47-126)||(5115612-5115691)
chr1 (24-111)||(33744156-33744243)
chr1 (51-142)||(40377067-40377158)
chr1 (19-97)||(4521043-4521121)
chr1 (24-113)||(27934747-27934837)
chr1 (71-140)||(30350911-30350978)
chr1 (20-125)||(5423753-5423858)
chr1 (57-126)||(25302103-25302172)
chr1 (77-126)||(47364049-47364098)
chr1 (19-99)||(37037640-37037720)
chr1 (37-125)||(44442261-44442349)
chr1 (22-125)||(4220636-4220739)
chr1 (39-134)||(14758572-14758667)
chr1 (47-142)||(31745397-31745492)
chr1 (72-127)||(34596125-34596180)
chr1 (19-134)||(36321623-36321738)
chr1 (60-142)||(39807557-39807640)
chr1 (42-125)||(43216299-43216382)
chr1 (47-142)||(50974564-50974659)
chr1 (72-126)||(9590913-9590967)
chr1 (84-142)||(44719239-44719297)
chr1 (24-113)||(5250920-5251009)
chr1 (58-127)||(7750463-7750532)
chr1 (42-87)||(8791485-8791530)
chr1 (73-134)||(18038940-18039001)
chr1 (37-78)||(19533280-19533321)
chr1 (40-139)||(38320538-38320636)
chr1 (90-126)||(42564262-42564298)
chr1 (51-127)||(50222612-50222688)
[»] chr7 (49 HSPs)
chr7 (21-142)||(8237945-8238066)
chr7 (27-135)||(19619993-19620101)
chr7 (26-135)||(34299740-34299849)
chr7 (19-142)||(5907817-5907939)
chr7 (36-135)||(5482405-5482503)
chr7 (24-126)||(43492207-43492310)
chr7 (24-135)||(44452038-44452150)
chr7 (26-117)||(24299146-24299237)
chr7 (23-135)||(24610835-24610947)
chr7 (26-113)||(41150034-41150121)
chr7 (24-142)||(3267600-3267718)
chr7 (21-134)||(25036962-25037076)
chr7 (24-128)||(39316297-39316401)
chr7 (19-125)||(34681685-34681791)
chr7 (24-140)||(23682444-23682559)
chr7 (26-135)||(26871771-26871880)
chr7 (26-142)||(39241570-39241687)
chr7 (46-132)||(7432656-7432743)
chr7 (37-134)||(38988717-38988816)
chr7 (19-124)||(18926320-18926425)
chr7 (24-101)||(31498660-31498737)
chr7 (24-113)||(46716177-46716266)
chr7 (47-138)||(38452192-38452283)
chr7 (24-134)||(10031919-10032029)
chr7 (26-135)||(26872781-26872891)
chr7 (22-80)||(35395904-35395962)
chr7 (19-129)||(47507603-47507713)
chr7 (20-111)||(3256648-3256740)
chr7 (65-117)||(32699395-32699447)
chr7 (24-123)||(41431099-41431199)
chr7 (24-99)||(1360534-1360609)
chr7 (24-142)||(9097685-9097802)
chr7 (24-97)||(33887887-33887960)
chr7 (24-128)||(35496576-35496681)
chr7 (24-117)||(35599817-35599910)
chr7 (37-86)||(48837977-48838025)
chr7 (19-134)||(27123267-27123383)
chr7 (42-134)||(31902747-31902839)
chr7 (91-142)||(47305516-47305567)
chr7 (24-82)||(6392179-6392237)
chr7 (47-101)||(10453485-10453539)
chr7 (48-134)||(34398074-34398159)
chr7 (52-137)||(8327824-8327909)
chr7 (47-128)||(17883317-17883398)
chr7 (49-126)||(40722382-40722459)
chr7 (19-91)||(25176329-25176401)
chr7 (21-128)||(26239544-26239652)
chr7 (47-126)||(35567135-35567215)
chr7 (59-107)||(37352436-37352484)
[»] chr8 (57 HSPs)
chr8 (19-135)||(1876479-1876595)
chr8 (19-142)||(12002260-12002383)
chr8 (19-142)||(14016857-14016980)
chr8 (24-139)||(11533230-11533345)
chr8 (28-126)||(44220716-44220814)
chr8 (19-135)||(31844214-31844331)
chr8 (26-134)||(32271170-32271278)
chr8 (67-142)||(36907841-36907916)
chr8 (24-135)||(39594486-39594597)
chr8 (37-135)||(40628964-40629062)
chr8 (24-133)||(38019418-38019526)
chr8 (26-125)||(44907218-44907318)
chr8 (24-135)||(7627844-7627955)
chr8 (24-134)||(38047607-38047718)
chr8 (24-134)||(2376726-2376836)
chr8 (25-113)||(20522943-20523031)
chr8 (17-112)||(37449531-37449626)
chr8 (19-134)||(1773799-1773915)
chr8 (24-128)||(1445137-1445242)
chr8 (14-123)||(31264985-31265094)
chr8 (31-135)||(41959978-41960083)
chr8 (24-112)||(18842275-18842363)
chr8 (37-135)||(30486620-30486719)
chr8 (24-134)||(39691112-39691222)
chr8 (42-142)||(4278957-4279056)
chr8 (24-135)||(5020051-5020160)
chr8 (14-113)||(24869402-24869497)
chr8 (24-135)||(35501064-35501176)
chr8 (42-126)||(35592455-35592539)
chr8 (44-141)||(14453699-14453794)
chr8 (73-135)||(34722774-34722837)
chr8 (24-86)||(30158108-30158170)
chr8 (24-118)||(37564346-37564440)
chr8 (26-118)||(9629833-9629925)
chr8 (24-137)||(12782775-12782888)
chr8 (53-134)||(26014752-26014833)
chr8 (19-134)||(42636363-42636479)
chr8 (33-143)||(27505970-27506079)
chr8 (36-69)||(9005010-9005043)
chr8 (19-111)||(37813423-37813516)
chr8 (37-134)||(43419730-43419827)
chr8 (37-118)||(43841043-43841124)
chr8 (24-96)||(24103087-24103159)
chr8 (24-128)||(34336477-34336581)
chr8 (38-134)||(41105996-41106092)
chr8 (26-110)||(42801078-42801162)
chr8 (76-123)||(7931765-7931812)
chr8 (47-126)||(45368729-45368808)
chr8 (24-118)||(33636716-33636810)
chr8 (92-141)||(32133686-32133735)
chr8 (19-112)||(41385258-41385351)
chr8 (24-85)||(42022640-42022701)
chr8 (42-126)||(6270334-6270418)
chr8 (94-134)||(33285923-33285963)
chr8 (24-111)||(33949571-33949658)
chr8 (56-128)||(44254131-44254203)
chr8 (82-134)||(44960519-44960571)
[»] chr4 (65 HSPs)
chr4 (24-142)||(53261556-53261674)
chr4 (24-142)||(40252654-40252771)
chr4 (24-105)||(49951717-49951798)
chr4 (22-125)||(36876064-36876167)
chr4 (24-142)||(53622301-53622420)
chr4 (20-125)||(45743309-45743414)
chr4 (24-125)||(52650697-52650798)
chr4 (19-142)||(37461462-37461585)
chr4 (26-135)||(3179003-3179113)
chr4 (24-125)||(31262914-31263014)
chr4 (24-125)||(47937861-47937962)
chr4 (19-135)||(49795138-49795254)
chr4 (37-140)||(38354473-38354577)
chr4 (19-135)||(17970803-17970917)
chr4 (27-100)||(23136539-23136612)
chr4 (38-134)||(41370166-41370262)
chr4 (24-136)||(50617494-50617606)
chr4 (26-124)||(4391968-4392067)
chr4 (37-142)||(35153262-35153368)
chr4 (25-123)||(25042743-25042837)
chr4 (19-126)||(21687591-21687699)
chr4 (24-142)||(32175431-32175548)
chr4 (19-142)||(22889253-22889376)
chr4 (19-142)||(22940917-22941040)
chr4 (24-118)||(2063473-2063567)
chr4 (33-142)||(18939858-18939967)
chr4 (19-134)||(8297864-8297980)
chr4 (70-142)||(20022234-20022306)
chr4 (58-142)||(49446583-49446667)
chr4 (19-90)||(21241120-21241191)
chr4 (31-141)||(39767212-39767323)
chr4 (51-114)||(44570122-44570185)
chr4 (26-116)||(49622961-49623052)
chr4 (36-134)||(7996722-7996816)
chr4 (26-117)||(19597165-19597256)
chr4 (58-129)||(36721589-36721660)
chr4 (24-113)||(12618713-12618802)
chr4 (58-142)||(49421884-49421969)
chr4 (19-139)||(20390018-20390138)
chr4 (19-123)||(23016231-23016335)
chr4 (36-139)||(23614626-23614729)
chr4 (24-128)||(25115267-25115371)
chr4 (26-134)||(39724064-39724175)
chr4 (19-111)||(44690284-44690376)
chr4 (50-113)||(14949006-14949069)
chr4 (24-95)||(24369405-24369476)
chr4 (24-95)||(37179689-37179760)
chr4 (26-125)||(48097952-48098051)
chr4 (72-126)||(1696194-1696248)
chr4 (24-118)||(24546722-24546816)
chr4 (24-86)||(40173524-40173586)
chr4 (84-142)||(41468142-41468200)
chr4 (72-134)||(41956428-41956490)
chr4 (47-127)||(50115068-50115145)
chr4 (73-134)||(38949057-38949118)
chr4 (37-101)||(41394013-41394078)
chr4 (47-124)||(51105943-51106020)
chr4 (24-128)||(51834912-51835017)
chr4 (24-88)||(2818357-2818421)
chr4 (19-63)||(21240662-21240706)
chr4 (76-128)||(24753978-24754030)
chr4 (24-112)||(27748438-27748526)
chr4 (19-134)||(32055338-32055454)
chr4 (74-118)||(42901983-42902027)
chr4 (24-111)||(42956992-42957080)
[»] chr3 (48 HSPs)
chr3 (24-142)||(48551038-48551156)
chr3 (36-134)||(14146110-14146208)
chr3 (24-137)||(3026979-3027093)
chr3 (14-135)||(12140133-12140255)
chr3 (24-134)||(45757927-45758037)
chr3 (26-134)||(20821303-20821412)
chr3 (19-135)||(24313544-24313661)
chr3 (24-142)||(25317803-25317921)
chr3 (24-142)||(46725655-46725773)
chr3 (62-135)||(33072108-33072181)
chr3 (24-111)||(29612018-29612106)
chr3 (37-113)||(37388418-37388494)
chr3 (19-118)||(54911194-54911293)
chr3 (58-127)||(1511367-1511436)
chr3 (42-135)||(40614263-40614356)
chr3 (24-101)||(28691955-28692032)
chr3 (10-134)||(49168725-49168849)
chr3 (24-135)||(22772858-22772970)
chr3 (47-134)||(1829243-1829330)
chr3 (24-115)||(53040467-53040558)
chr3 (52-142)||(18399149-18399239)
chr3 (28-112)||(9342672-9342757)
chr3 (24-97)||(48322241-48322314)
chr3 (24-81)||(50644132-50644189)
chr3 (26-117)||(45584343-45584432)
chr3 (72-127)||(25548203-25548258)
chr3 (103-142)||(39651994-39652033)
chr3 (19-97)||(37708430-37708508)
chr3 (19-120)||(38009026-38009128)
chr3 (65-135)||(52340118-52340188)
chr3 (24-113)||(2831545-2831634)
chr3 (27-128)||(37359467-37359570)
chr3 (44-97)||(40546345-40546398)
chr3 (47-127)||(19898107-19898187)
chr3 (48-95)||(25061987-25062034)
chr3 (21-128)||(48811372-48811479)
chr3 (19-114)||(54290795-54290890)
chr3 (20-90)||(12908860-12908930)
chr3 (24-134)||(23554672-23554781)
chr3 (72-142)||(54911988-54912058)
chr3 (90-135)||(27968262-27968307)
chr3 (52-129)||(41750755-41750832)
chr3 (49-118)||(43803992-43804061)
chr3 (14-118)||(4305156-4305260)
chr3 (73-125)||(40690235-40690287)
chr3 (54-118)||(46547794-46547858)
chr3 (37-97)||(46711949-46712009)
chr3 (47-123)||(53766702-53766777)
[»] chr6 (26 HSPs)
chr6 (26-142)||(29716754-29716871)
chr6 (37-137)||(10364754-10364854)
chr6 (24-142)||(23344569-23344688)
chr6 (24-118)||(13445745-13445839)
chr6 (24-141)||(5704549-5704665)
chr6 (24-134)||(27752644-27752759)
chr6 (48-142)||(34552312-34552407)
chr6 (14-125)||(6586424-6586535)
chr6 (37-142)||(21130707-21130813)
chr6 (37-142)||(10429739-10429843)
chr6 (25-141)||(34552494-34552610)
chr6 (44-142)||(34552167-34552265)
chr6 (14-123)||(3753103-3753213)
chr6 (14-123)||(3769326-3769436)
chr6 (75-134)||(1479090-1479149)
chr6 (21-68)||(26187510-26187557)
chr6 (24-134)||(27778752-27778862)
chr6 (47-113)||(6546738-6546804)
chr6 (57-127)||(7465508-7465578)
chr6 (92-134)||(26187452-26187494)
chr6 (24-134)||(30509314-30509424)
chr6 (47-125)||(31702747-31702825)
chr6 (26-135)||(354576-354685)
chr6 (72-140)||(22695473-22695542)
chr6 (24-128)||(2692434-2692538)
chr6 (19-119)||(12132520-12132620)
[»] chr2 (65 HSPs)
chr2 (19-137)||(12848467-12848585)
chr2 (19-123)||(24389632-24389736)
chr2 (36-135)||(33068540-33068639)
chr2 (24-125)||(33454966-33455067)
chr2 (40-135)||(431630-431726)
chr2 (24-123)||(6083911-6084010)
chr2 (24-126)||(6334678-6334780)
chr2 (37-126)||(12205530-12205620)
chr2 (24-118)||(565706-565802)
chr2 (26-111)||(8964392-8964477)
chr2 (37-134)||(30523014-30523111)
chr2 (40-135)||(42342487-42342581)
chr2 (24-134)||(33634796-33634906)
chr2 (26-139)||(6411367-6411480)
chr2 (44-137)||(32066740-32066833)
chr2 (26-134)||(9049148-9049256)
chr2 (19-135)||(3074073-3074187)
chr2 (14-111)||(2825977-2826074)
chr2 (24-101)||(4654992-4655069)
chr2 (21-140)||(9448450-9448570)
chr2 (24-140)||(21277551-21277666)
chr2 (24-107)||(12762896-12762979)
chr2 (37-88)||(30822764-30822815)
chr2 (19-125)||(13538389-13538495)
chr2 (24-142)||(29685694-29685812)
chr2 (37-142)||(40874826-40874932)
chr2 (19-105)||(30869589-30869673)
chr2 (24-128)||(18043839-18043942)
chr2 (36-134)||(11385462-11385561)
chr2 (61-139)||(28695605-28695684)
chr2 (24-142)||(2796517-2796626)
chr2 (41-118)||(27692744-27692822)
chr2 (20-74)||(28858098-28858152)
chr2 (19-108)||(3882609-3882698)
chr2 (72-141)||(5961954-5962023)
chr2 (24-113)||(11944892-11944981)
chr2 (37-121)||(37284896-37284981)
chr2 (55-135)||(10183219-10183299)
chr2 (25-112)||(9153494-9153581)
chr2 (67-118)||(15806054-15806105)
chr2 (19-113)||(41543970-41544065)
chr2 (37-139)||(3666431-3666533)
chr2 (57-127)||(6761731-6761801)
chr2 (92-134)||(33898643-33898685)
chr2 (24-138)||(39647767-39647881)
chr2 (77-126)||(7271831-7271880)
chr2 (37-122)||(8086966-8087051)
chr2 (41-126)||(8333580-8333665)
chr2 (24-141)||(44941072-44941189)
chr2 (26-118)||(814996-815088)
chr2 (29-117)||(18684365-18684453)
chr2 (36-139)||(44838626-44838730)
chr2 (26-113)||(19890208-19890295)
chr2 (24-111)||(25622532-25622618)
chr2 (39-134)||(33962941-33963036)
chr2 (26-101)||(37313700-37313775)
chr2 (72-134)||(16944811-16944873)
chr2 (72-134)||(17015476-17015538)
chr2 (37-111)||(19495215-19495288)
chr2 (19-113)||(32859778-32859872)
chr2 (90-127)||(11364702-11364739)
chr2 (90-127)||(32787586-32787623)
chr2 (19-134)||(1334881-1334997)
chr2 (90-126)||(21004775-21004811)
chr2 (24-124)||(42924425-42924525)
[»] chr5 (48 HSPs)
chr5 (22-142)||(14309074-14309197)
chr5 (26-140)||(38594923-38595037)
chr5 (24-142)||(26453631-26453748)
chr5 (53-139)||(16636656-16636742)
chr5 (26-142)||(17774272-17774388)
chr5 (25-142)||(26432261-26432378)
chr5 (37-141)||(22601786-22601890)
chr5 (39-142)||(27325814-27325917)
chr5 (24-112)||(12221435-12221523)
chr5 (24-91)||(41568708-41568775)
chr5 (24-118)||(4695070-4695164)
chr5 (37-135)||(21259415-21259513)
chr5 (24-140)||(29829588-29829704)
chr5 (20-135)||(5356295-5356410)
chr5 (51-141)||(3263772-3263862)
chr5 (24-134)||(10228317-10228426)
chr5 (47-137)||(27794854-27794944)
chr5 (19-142)||(10410443-10410567)
chr5 (37-117)||(26686667-26686747)
chr5 (37-117)||(26956398-26956478)
chr5 (19-134)||(5758555-5758670)
chr5 (26-113)||(36609150-36609237)
chr5 (51-139)||(8247092-8247180)
chr5 (44-142)||(28639570-28639669)
chr5 (37-142)||(43000760-43000867)
chr5 (51-141)||(10051755-10051845)
chr5 (24-134)||(31914168-31914277)
chr5 (19-113)||(39177675-39177768)
chr5 (26-99)||(26663635-26663708)
chr5 (26-99)||(26935230-26935303)
chr5 (58-127)||(31672444-31672513)
chr5 (24-118)||(967100-967194)
chr5 (84-142)||(22473493-22473551)
chr5 (19-128)||(30104797-30104907)
chr5 (72-118)||(31889662-31889708)
chr5 (19-97)||(34032125-34032203)
chr5 (47-123)||(14475009-14475085)
chr5 (19-142)||(30501129-30501253)
chr5 (19-142)||(30541472-30541596)
chr5 (47-134)||(14042484-14042571)
chr5 (24-118)||(25437888-25437983)
chr5 (19-133)||(779079-779192)
chr5 (59-140)||(28207696-28207778)
chr5 (24-113)||(2918616-2918705)
chr5 (73-134)||(20125652-20125713)
chr5 (24-125)||(24041030-24041131)
chr5 (24-69)||(36160317-36160362)
chr5 (26-62)||(9740932-9740968)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-118)||(26694-26793)
[»] scaffold0236 (1 HSPs)
scaffold0236 (37-142)||(19578-19683)
[»] scaffold0037 (1 HSPs)
scaffold0037 (37-140)||(35274-35376)
[»] scaffold0053 (1 HSPs)
scaffold0053 (19-80)||(5755-5816)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-113)||(219185-219277)


Alignment Details
Target: chr1 (Bit Score: 125; Significance: 1e-64; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 48947192 - 48947320
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947192 cctggggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 48947291  T
Q  114 gttaccatttaaagtccttaactagtgcc 142  Q
    |||||||||||||||||||||||||||||    
T  48947292 gttaccatttaaagtccttaactagtgcc 48947320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 16113912 - 16114037
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat--aaaaagtt 116  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  16113912 ggcactctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcactgattacacaaactttcataaaaaaagtt 16114011  T
Q  117 accatttaaagtccttaactagtgcc 142  Q
    |||||||||   |||||| |||||||    
T  16114012 accatttaagccccttaagtagtgcc 16114037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 33791847 - 33791729
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || |||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||    
T  33791847 tctttaagtatgctaaattaagtaattattcttttaaaatgtcaaatttttcaatttccaatacaccgattacacaaactttcataaaaagttactattt 33791748  T
Q  124 aaagtccttaactagtgcc 142  Q
    |||||| ||||| ||||||    
T  33791747 aaagtctttaaccagtgcc 33791729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 39973885 - 39974007
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| |||||| ||||| |||||||||||||||     
T  39973885 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgattatacaaactttcataaaaagttat 39973984  T
Q  119 catttaaagtccttaactagtgc 141  Q
    ||||||||||| ||||| |||||    
T  39973985 catttaaagtctttaaccagtgc 39974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 35259159 - 35259043
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| |||||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||  |||||||||||    
T  35259159 ggcactctttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattacacacacatttgtaaaaagttac 35259060  T
Q  119 catttaaagtccttaac 135  Q
    |||||||||||||||||    
T  35259059 catttaaagtccttaac 35259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 31042999 - 31043085
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 110  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  31042999 tctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgattacacaaactttcataa 31043085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 4040891 - 4041007
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||||||  |||||||||||||||||   ||||| |||||||||||||||||| ||||  ||| |||||||||| ||||| ||||||||| |||||    
T  4040891 tctttaagcattttaaattaagtaattattacataaaagtgtcaaagttttcaattttcaatatacttattacacaaactttcacaaaaagttatcattt 4040990  T
Q  124 aaagtccttaactagtg 140  Q
    |||||||||||||||||    
T  4040991 aaagtccttaactagtg 4041007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 40286856 - 40286972
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||| |||| |||||| ||| |||||   |||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||    
T  40286856 tctttaagcatgctaaataaagtcattattctttcaaaattaaaaagttttcaatttccaatgcactgagtacacaaacttttataaaaagttactattt 40286955  T
Q  124 aaagtccttaactagtg 140  Q
    ||||| |||||||||||    
T  40286956 aaagttcttaactagtg 40286972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 34861325 - 34861202
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| ||| || ||||||||||  | ||    
T  34861325 ggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaatacactgatttcactaaatttcataaaagttaac 34861226  T
Q  119 catttaaagtccttaactagtgcc 142  Q
     |||||| ||| ||||| ||||||    
T  34861225 tatttaaggtcattaacgagtgcc 34861202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 3047860 - 3047966
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| ||||||||||||||| || ||||||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||| ||||    
T  3047860 ggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattgattaaacaaactttcataaaaaattac 3047959  T
Q  119 catttaa 125  Q
     ||||||    
T  3047960 tatttaa 3047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 38172665 - 38172761
Alignment:
Q  46 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||    
T  38172665 taattattctttaaaaatgtaaaagtttttaatttttaatgcactgattacacaaacttttataaaaagttatcatttaaagtccttaacaagtgcc 38172761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 40053293 - 40053401
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||||||| |||||||| |||||| || |||||||||||||||||||||||||| |||| || | |||||||||| |||||||||||||||| ||||||    
T  40053293 tttaagcattctaaattaggtaattgttctttaaaaatgtcaaagttttcaattttcaatacatttattacacaaactttcataaaaagttactatttaa 40053392  T
Q  126 agtccttaa 134  Q
     ||| ||||    
T  40053393 ggtcattaa 40053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 42573882 - 42573778
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||| || ||||||||||| |||||||||||||| ||||| ||  ||||||||||||    
T  42573882 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgcactgattatacaaacttcaataaaaagttac 42573783  T
Q  119 cattt 123  Q
    |||||    
T  42573782 cattt 42573778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 49478810 - 49478929
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 122  Q
    |||||||||||  | | |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||  || |||||||||||||    
T  49478810 tctttaagcatgttgagttaagtaattattttttttaaatgtcaaaagttttcaatttccaatgcactgattacacaaacttctatgaaaagttaccatt 49478909  T
Q  123 taaagtccttaactagtgcc 142  Q
    |||  |||||||| ||||||    
T  49478910 taagttccttaaccagtgcc 49478929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 290601 - 290701
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||  || ||||||||  |||||| || ||||||    
T  290601 ctaaattaagtaattattcttttaaaatgtcaaagttttcaatttacaatgcactgattacacaaacttcaatgaaaagttattatttaacgttcttaac 290700  T
Q  136 t 136  Q
    |    
T  290701 t 290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 24034054 - 24034166
Alignment:
Q  23 ttctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 122  Q
    |||||||||||||||||||  |||||||||| ||| ||||| | ||||||||||||||| ||||||||||||||||||| | | ||||||  |||| |||    
T  24034054 ttctttaagcatactaaatagagtaattattctttcaaaatttaaaagttttcaatttctaatgcactgattacacaaactcttataaaagtttactatt 24034153  T
Q  123 taaagtccttaac 135  Q
    |||||||| ||||    
T  24034154 taaagtccataac 24034166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 35543509 - 35543401
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||  | | |||||||||| |||  || |||||||||||||||    
T  35543509 tttaagcatgctaaattaagtaattatttttttaaaatatcaaagttttcaatttccaatatattaattacacaaacttttgtacaaagttaccatttaa 35543410  T
Q  126 agtccttaa 134  Q
     ||| ||||    
T  35543409 ggtctttaa 35543401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 48991 - 48900
Alignment:
Q  27 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||| |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  48991 ttaatcatgctaaattaagtaattattcttgaaaaatgtaaaagttttcaattttcaatgcaccgattacacaaactttcataaaaatttac 48900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 51904664 - 51904562
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 136  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |  | |||||||| ||||||||||| || | |||||| ||||||||||    
T  51904664 taaattaagtaattattcttttaaaatgttaaagttttcaatttccaatgccccaactacacaaactttcataaaaaattgcaatttaaggtccttaact 51904565  T
Q  137 agt 139  Q
    |||    
T  51904564 agt 51904562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 1656447 - 1656548
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||  | | ||||||| ||||||||||||||||  |||||| ||| |||||    
T  1656447 taaattaaataattattttttaaaaatgtcaaaattttcaatttccaatgcattttaatacacaatttttcataaaaagttattatttaaggtcattaac 1656546  T
Q  136 ta 137  Q
    ||    
T  1656547 ta 1656548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 10355135 - 10355031
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || |||||| ||||||||||||||||||||| || || |||||||||||||||  || |||| |||||| || |||||||| |||||||||    
T  10355135 tctttaagtattctaaataaagtaattattttttaaaaatatctaaattttcaatttccaatataccgatttcacaaacttccataaaaaattaccattt 10355036  T
Q  124 aaagt 128  Q
    |||||    
T  10355035 aaagt 10355031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 46804932 - 46804819
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| ||||||||| |||| ||||||||||||||  ||| |||  ||||||||||||||||||||||  || |||||||| |  |||||||||    
T  46804932 tctttaagcattctaaattaattaataattttttaaaaatgataaactttctaatttccaatgcactgattacattaactttcataatagtttaccattt 46804833  T
Q  124 aaagtccttaacta 137  Q
    || ||| |||||||    
T  46804832 aaggtcattaacta 46804819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 759333 - 759221
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 124  Q
    ||||||||| ||||||||| |||| ||||  ||||| ||||||||||| ||||||||||| ||| | |||||||||| || |||||||  ||||||||||    
T  759333 tttaagcattctaaattaaataatcatttcataaaattgtcaaagtttccaatttccaatacactttattacacaaacttacataaaagattaccattta 759234  T
Q  125 aagtccttaacta 137  Q
    |||| ||||||||    
T  759233 aagttcttaacta 759221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 30548293 - 30548387
Alignment:
Q  46 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 141  Q
    |||| ||||||||||| || |||| ||||||||||||||| |||||||||||| || ||||||||||  ||||||||||| || ||||||||||||    
T  30548293 taatcattttttaaaattgacaaacttttcaatttccaatacactgattacactaactttcataaaagtttaccatttaaggt-cttaactagtgc 30548387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 31652643 - 31652738
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||||||| |||||| ||||||  ||| ||||||| ||||| |||||||||| |||||||| | | |||||||||||||| ||||||||||||||    
T  31652643 aattattttataaaaaagtcaaatattttaatttccgatgcaatgattacacatattttcatgataggttaccatttaaagcccttaactagtgcc 31652738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 40203163 - 40203076
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||  |||||| ||||||  ||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||| ||||||    
T  40203163 aattatttcataaaaaagtcaaatatttcaatttccaatgcattgattacacatattttcagacaaagttaccatttaaagaccttaa 40203076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 31807886 - 31807800
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 111  Q
    ||||||||| ||||| |||||||||||| ||||||||||| | |||||||||||| |||||||| | |||||||||| |||||||||    
T  31807886 tttaagcattctaaaataagtaattattctttaaaaatgtgatagttttcaattttcaatgcactttattacacaaactttcataaa 31807800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 40341599 - 40341718
Alignment:
Q  24 tctttaagcatactaaattaagtaattatttt-ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 122  Q
    |||||||| || ||||||||||||||| ||||   |||||| ||||| |||||||||| ||||||||  ||||||| || ||||||||||  |||| |||    
T  40341599 tctttaagtattctaaattaagtaatttttttaaaaaaaatatcaaacttttcaattttcaatgcaccaattacactaactttcataaaagtttacgatt 40341698  T
Q  123 taaagtccttaactagtgcc 142  Q
    ||| |||||||| |||||||    
T  40341699 taaggtccttaattagtgcc 40341718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 9931801 - 9931875
Alignment:
Q  52 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||| |||||||||||||||||||||| |||| || | |||||||||| ||| ||||||| ||||||||||||    
T  9931801 tttttttaaaatgtcaaagttttcaattttcaatacattaattacacaaacttttataaaaaattaccatttaaa 9931875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 290957 - 290841
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| ||||||  |||||||||| ||| ||||| | |||||||| |||||||||||| |||| |||||| | ||| |||||| ||||| || |    
T  290957 tctttaagcatgctaaatagagtaattattctttcaaaatttaaaagtttttaatttccaatgcgctgactacacatacttttataaaaggttactatct 290858  T
Q  124 aaagtccttaactagtg 140  Q
    || ||| ||| ||||||    
T  290857 aaggtctttagctagtg 290841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 26700247 - 26700335
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 112  Q
    ||||||| |||||||||| ||||||||||| ||| |||||   |||||||| |||||||||| |||| |||||||||| ||| ||||||    
T  26700247 tctttaaacatactaaataaagtaattattcttttaaaattaaaaagtttttaatttccaatacactcattacacaaacttttataaaa 26700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 44461597 - 44461683
Alignment:
Q  48 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||| ||| |||||||||||||||| |||||  |||||| | |||||||||||||||||||||| |||| ||||||| || |||||    
T  44461597 attattcttttaaaatgtcaaagtttttaatttttaatgca-taattacacaaattttcataaaaatttactatttaaaatctttaac 44461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 32787351 - 32787261
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaa 126  Q
    ||||||||||||||| | ||||||||||| ||||| ||||||| | ||| || |  |||||||||||||| |||||||||||| |||||||    
T  32787351 taaattaagtaattaatctttaaaaatgttaaagtgttcaattcctaatacattttattacacaaatttttataaaaagttactatttaaa 32787261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 12148354 - 12148289
Alignment:
Q  77 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||||||||| || ||||||| |||||||| | |||||||||||||||| | ||||||||||||    
T  12148354 atttccaatgcattggttacacatattttcatgataagttaccatttaaagactttaactagtgcc 12148289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 31398519 - 31398418
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| | |||||||||| |||||||||||| ||||||| ||| |||| |||||  |||| ||  |||||| ||||||| ||||||| |||| ||||    
T  31398519 tctttaagtagactaaattaaataattatttttttaaaatgtgaaattttttaatttataatgtaccaattacataaatttttataaaaaattactattt 31398420  T
Q  124 aa 125  Q
    ||    
T  31398419 aa 31398418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 45753482 - 45753551
Alignment:
Q  58 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    ||||||||||||  ||||||||| ||||||| |||||||||||||||||| ||||  ||| |||||||||    
T  45753482 aaaaatgtcaaatatttcaattttcaatgcattgattacacaaattttcaaaaaacattatcatttaaag 45753551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 24075110 - 24075214
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||| ||||  || ||||||||||||||||| || ||||| |||||||| | |||| | ||||||||| |||| |||| ||||||||||| |||||    
T  24075110 taaattaaataatatttctttaaaaatgtcaaagtgtttaattttcaatgcactttattatataaattttcaaaaaatgttatcatttaaagtctttaac 24075209  T
Q  136 tagtg 140  Q
     ||||    
T  24075210 cagtg 24075214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 5115691 - 5115612
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||| || |||||| || |||  ||||||||||||||||| | ||||||||||||| || ||||| ||||||||||||    
T  5115691 aattatgttataaaaaagttaaatatttcaatttccaatgcattaattacacaaatttacaaaaaaatttaccatttaaa 5115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 33744243 - 33744156
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    |||||||||||  |||| |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||| |  ||||||||||    
T  33744243 tctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattacatattttttcataaa 33744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 40377067 - 40377158
Alignment:
Q  51 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||| |||||| ||||||  |||  ||| ||||| || ||||||||||| ||||||| | || ||||||||||||| ||||||||||||||    
T  40377067 attttataaaaaagtcaaatattttgattcccaattcattgattacacaacttttcatgataaattaccatttaaaggccttaactagtgcc 40377158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 4521121 - 4521043
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 97  Q
    |||| |||||||||||||||||  |||  |||||| |||||||| || |||  ||||||||||||||||| ||||||||    
T  4521121 ggcactctttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 4521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 27934837 - 27934747
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaa 113  Q
    ||||||||||| ||||||||| |||||||| ||||||||| |||||  ||||||||| |||| | | | |||||||||| ||| |||||||    
T  27934837 tctttaagcattctaaattaaataattattatttaaaaatatcaaaagtttcaattttcaatacaatttattacacaaacttttataaaaa 27934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 30350978 - 30350911
Alignment:
Q  71 ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtg 140  Q
    |||||||||| ||||||| ||||||||| || |||||||||  |||||||||||| ||| ||||||||||    
T  30350978 ttttcaattttcaatgcattgattacactaactttcataaa--gttaccatttaaggtctttaactagtg 30350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 5423858 - 5423753
Alignment:
Q  20 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 119  Q
    |||||||||||||||  |||||||   ||||||| |||||||| || |||   |||||||| ||||||| | | |||| || |||||||||||| |||||    
T  5423858 gcattctttaagcattttaaattagaaaattattctttaaaaaagttaaatagttcaattttcaatgcattaaatacataagttttcataaaaaattacc 5423759  T
Q  120 atttaa 125  Q
    ||||||    
T  5423758 atttaa 5423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 25302103 - 25302172
Alignment:
Q  57 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||| ||||||| |||| |||| |||| || |||||||||| |||||||| | |||||||||||||||    
T  25302103 taaaaaagtcaaagatttcgattttcaatacattgattacacatattttcatgataagttaccatttaaa 25302172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 47364098 - 47364049
Alignment:
Q  77 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||||||    
T  47364098 atttctaatgaactgattacacaaattttcataaaaatttatcatttaaa 47364049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 37037640 - 37037720
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 99  Q
    ||||||||||||||||  ||||   ||||||||||||| ||||| || |||  |||||||||||||| || ||||||||||    
T  37037640 ggcattctttaagcattttaaaaatagtaattatttttaaaaaaagttaaatgtttcaatttccaatacattgattacaca 37037720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 44442261 - 44442349
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||||| | ||||||| |||||||| ||||||  ||||||||| |||| || | | |||||| ||||| |||||||||||| ||||||    
T  44442261 taaattaggaaattattctttaaaaaagtcaaatatttcaattttcaatacattaaatacacatatttttataaaaagttactatttaa 44442349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 4220739 - 4220636
Alignment:
Q  22 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccat 121  Q
    |||||||||||||   |||||| | ||||||||||||| || ||||||  ||| |||||| ||  || |||||| ||||| ||||||| ||| |||||||    
T  4220739 attctttaagcatttcaaattatgaaattattttttaagaaagtcaaatattttaatttctaacacattgattatacaaaatttcatagaaacttaccat 4220640  T
Q  122 ttaa 125  Q
    ||||    
T  4220639 ttaa 4220636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 14758572 - 14758667
Alignment:
Q  39 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||| |||||||  ||||||| ||  ||  ||||||||| | ||||| ||| | ||||| |||||||||||| |||| |||||||||||||||    
T  14758572 aattaagaaattattccttaaaaaagtttaacatttcaattttcgatgcattgaatgcacaatttttcataaaaatttactatttaaagtccttaa 14758667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 31745492 - 31745397
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||||||| ||| || ||||||  |||| |||  | ||||| |||||||||| ||||| || | ||||||| |||||||| ||||||||||||||    
T  31745492 aattattttataataaagtcaaatatttcgattctcgatgcattgattacacatatttttatgataagttactatttaaaggccttaactagtgcc 31745397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 34596180 - 34596125
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    |||| |||| ||||||| |||||||||| | ||||||||||||||| |||||||||    
T  34596180 tttcgattttcaatgcattgattacacataatttcataaaaagttatcatttaaag 34596125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 36321738 - 36321623
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||||| |||  ||||||||||| |||| ||| || |||  |||| |||||||||||| ||||||||   ||||| ||||| | || |    
T  36321738 ggcactctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattacatgtatttttataaatacttgc 36321639  T
Q  119 catttaaagtccttaa 134  Q
     ||||| |||||||||    
T  36321638 tatttatagtccttaa 36321623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 39807557 - 39807640
Alignment:
Q  60 aaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||| ||| |||||||||| |||||||||  |||||| ||| |||| ||||||| | ||||| |||||| ||||||||||||    
T  39807557 aaatgttaaaattttcaattttcaatgcactttattacataaactttcgtaaaaagctgccattgaaagtctttaactagtgcc 39807640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 43216382 - 43216299
Alignment:
Q  42 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    |||||||||||||||| |||||| |||| ||| ||||||  |||| |||| |||||| || ||||||||||  |||| ||||||    
T  43216382 taagtaattattttttgaaaatgacaaattttccaatttttaatgaactggttacactaactttcataaaagtttactatttaa 43216299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 50974659 - 50974564
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||||||| |||||| ||||||  ||||||||| | ||||| | |||||| | |||||||| | || |||||||||||||  |||||| ||||||    
T  50974659 aattattttataaaaaagtcaaatatttcaattttcgatgcattaattacatatattttcatgataaattaccatttaaaggtcttaacgagtgcc 50974564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 9590913 - 9590967
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||| |||| ||||| | |||||||||| |||||||||||| |||||||||||||    
T  9590913 tttcgatttacaatgtattgattacacacattttcataaaatgttaccatttaaa 9590967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 44719239 - 44719297
Alignment:
Q  84 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||| |||||||||| |||||||| | || |||||||||||||  |||||||||||||    
T  44719239 atgcaatgattacacacattttcatgataaattaccatttaaagctcttaactagtgcc 44719297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 5251009 - 5250920
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||| |||||||||||| | | ||||| |||||||| ||||||   || ||||| ||||| | | | ||||||||||||||||||||    
T  5251009 tctttaaacatactaaattaggaagttattctttaaaaaagtcaaacagtttaattttcaatgtattaaatacacaaattttcataaaaa 5250920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 7750463 - 7750532
Alignment:
Q  58 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    ||||| ||||||  ||||||||||||||||| | |||| | || |||||| ||||||||||| |||||||    
T  7750463 aaaaaagtcaaatgtttcaatttccaatgcattaattatataacttttcaaaaaaagttaccttttaaag 7750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 8791530 - 8791485
Alignment:
Q  42 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgc 87  Q
    |||||||||| | ||||||||||| |||||||||||||| ||||||    
T  8791530 taagtaattagtctttaaaaatgtaaaagttttcaattttcaatgc 8791485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 18038940 - 18039001
Alignment:
Q  73 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||  || ||||||| ||||    
T  18038940 ttcaatttccgatgcattgaatacacaaattttcataaaaaattattatctaaagtctttaa 18039001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 19533280 - 19533321
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaat 78  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||    
T  19533280 taaattaagcaattattttttaaaaatatcaaacttttcaat 19533321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 38320636 - 38320538
Alignment:
Q  40 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta-cacaaattttcataaaaagttaccatttaaagtccttaactag 138  Q
    |||||||||||||| ||||||| | | ||| ||||| ||||| || |||||  ||| |||| ||||| ||||||||||||||||| ||||  ||||||||    
T  38320636 attaagtaattattctttaaaattattaaaattttcgatttctaaagcact--ttatcacacattttaataaaaagttaccatttgaagtttttaactag 38320539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 42564262 - 42564298
Alignment:
Q  90 tgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  42564262 tgataacacaaattttcaaaaaaagttaccatttaaa 42564298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 50222688 - 50222612
Alignment:
Q  51 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    ||||| ||||||  |||||  ||| ||||| ||||||| |||||||||  ||||||||||||| |||| ||||||||    
T  50222688 attttataaaaaaatcaaatattttaattttcaatgcattgattacacttattttcataaaaaattactatttaaag 50222612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 8237945 - 8238066
Alignment:
Q  21 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacca 120  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  8237945 cattatttaagtatactaaattaagtaattattctttaaaaatgtcaaagttttcatttttcaatgcactgattacacaaactttcataaaaagttacca 8238044  T
Q  121 tttaaagtccttaactagtgcc 142  Q
    ||||| ||||||||||| ||||    
T  8238045 tttaaggtccttaactaatgcc 8238066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 19619993 - 19620101
Alignment:
Q  27 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||     
T  19619993 ttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgattatacaacttttcataaaaagttactatttaag 19620092  T
Q  127 gtccttaac 135  Q
    | |||||||    
T  19620093 gcccttaac 19620101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 34299849 - 34299740
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||    
T  34299849 tttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactgattacacaaactttcataaaaagttactatttaa 34299750  T
Q  126 agtccttaac 135  Q
     |||||||||    
T  34299749 ggtccttaac 34299740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 5907817 - 5907939
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||||||||||||||||||| ||| ||||||| ||||  |||||||||||||| ||||||| |||||||||||||  ||||    
T  5907817 ggcactctttaagcattctaaattaagtaattatttttttaaa-tgtcaaacttttttatttccaatgcactaattacactaattttcataaaagtttac 5907915  T
Q  119 catttaaagtccttaactagtgcc 142  Q
     |||||||||||||||||||||||    
T  5907916 tatttaaagtccttaactagtgcc 5907939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 5482503 - 5482405
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||    
T  5482503 ctaaattaagtaattattcttttaaaatgtcaaagttttca-tttccaatgcattggttacacaaaatttcataaaaagttacaatttaaagtccttaac 5482405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 43492310 - 43492207
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| ||| ||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  43492310 tctttaagcattctaaattaagtaattattctttagaaatgtcaaaatttacaatttccaatgcactttattacacaaactttaataaaaagttaccatt 43492211  T
Q  123 taaa 126  Q
    ||||    
T  43492210 taaa 43492207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 44452150 - 44452038
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||| ||| |||||||||||||||||| ||||||||| |||||  |||||||||||||||||| | |||||||||| ||||||||||| |||| |||    
T  44452150 tctttaaacattctaaattaagtaattattatttaaaaatatcaaaagtttcaatttccaatgcactttattacacaaactttcataaaaaattactatt 44452051  T
Q  123 taaagtccttaac 135  Q
    ||||||| |||||    
T  44452050 taaagtcattaac 44452038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 24299237 - 24299146
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||||||||  ||||||||| |||||||  |||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||    
T  24299237 tttaagcatgttaaattaagaaattattccttaaaaatgtcaaattttttaatttccaatgcactgattatacaacttttcataaaaagtta 24299146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 24610947 - 24610835
Alignment:
Q  23 ttctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 122  Q
    |||||||| ||| |||||||||  ||||||| ||| ||||||| |||||||| |||||| ||| |||| |||||||||| ||| ||||||| ||| ||||    
T  24610947 ttctttaaacatgctaaattaaacaattattcttttaaaatgttaaagttttgaatttctaattcactaattacacaaacttttataaaaaattatcatt 24610848  T
Q  123 taaagtccttaac 135  Q
    |||||||||||||    
T  24610847 taaagtccttaac 24610835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 41150121 - 41150034
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||||||||  ||||||||||||||||| ||||||| ||| |||| ||||||||  |||||||||||||| |||||||||||||||||    
T  41150121 tttaagcatcataaattaagtaattattctttaaaagtgttaaagatttcaattcacaatgcactgattatacaaattttcataaaaa 41150034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 3267718 - 3267600
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||| ||||||||||| ||| ||||| | ||||||||| |||| ||||||||| |||||||||| ||| ||||||| || | ||||    
T  3267718 tctttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttccattttcaatgcactcattacacaaacttttataaaaacttgctattt 3267619  T
Q  124 aaagtccttaactagtgcc 142  Q
     | ||||||||| ||||||    
T  3267618 taggtccttaaccagtgcc 3267600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 25037076 - 25036962
Alignment:
Q  21 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttacc 119  Q
    |||| |||||||||  ||||||||||||||||| |||||||| |||||| |||| ||||| |||||||| | ||| |||||| ||||||| ||||||||     
T  25037076 cattttttaagcattttaaattaagtaattattatttaaaaaggtcaaaatttttaattttcaatgcactttattgcacaaactttcatagaaagttaca 25036977  T
Q  120 atttaaagtccttaa 134  Q
    ||||||| |||||||    
T  25036976 atttaaaatccttaa 25036962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 39316401 - 39316297
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||||||| ||||||||||||||||| || || ||||||||| ||||||||||  | || |||| ||||||||  |||||||||||||||  ||||    
T  39316401 tctttaagcatattaaattaagtaattattcttcaataatgtcaaaattttcaatttttactgtactggttacacaagctttcataaaaagttataattt 39316302  T
Q  124 aaagt 128  Q
    |||||    
T  39316301 aaagt 39316297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 34681685 - 34681791
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||   |||||||||||||||| | | ||||||| |||| ||||||||||||    
T  34681685 ggcagtctttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcattaaatacacaagtttttataaaaagttac 34681784  T
Q  119 catttaa 125  Q
     ||||||    
T  34681785 tatttaa 34681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 23682559 - 23682444
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| ||| ||||||||| |||||||||||| |||||||||||||||| ||||| |||| || |||| | ||||| ||| ||||||||||||| |||    
T  23682559 tctttaaacattctaaattaaataattatttttt-aaaatgtcaaagtttttaattttcaat-caatgataagacaaacttttataaaaagttacccttt 23682462  T
Q  124 -aaagtccttaactagtg 140  Q
     ||||||||||| |||||    
T  23682461 aaaagtccttaattagtg 23682444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 26871771 - 26871880
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||||||| |||||| ||||||||||| ||| ||||| | |||||||| ||||| || |  |||||||||||||| ||| ||||||| |||| ||||||    
T  26871771 tttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttgaattttcattatactgattacacaaacttttataaaaaattactatttaa 26871870  T
Q  126 agtccttaac 135  Q
     |||||||||    
T  26871871 ggtccttaac 26871880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 39241570 - 39241687
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 124  Q
    |||||||||  ||||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||||||| || |  ||||||||||  |||||||||     
T  39241570 tttaagcattataaattaagcaattattctttaaaaatgtcataccttttcaatttccaatggactgattatactagctttcataaaagtttaccatttt 39241669  T
Q  125 aagtccttaactagtgcc 142  Q
    | ||||||||| ||||||    
T  39241670 aggtccttaaccagtgcc 39241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 7432656 - 7432743
Alignment:
Q  46 taattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtcctt 132  Q
    |||||||| ||||||||| | |||||||| ||||| |||||||||  ||| |||||| ||| ||||||||||||||||||||||||||    
T  7432656 taattattatttaaaaatattaaagtttttaattttcaatgcactttattgcacaaacttttataaaaagttaccatttaaagtcctt 7432743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 38988717 - 38988816
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaat-tttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||||||| ||||||||| ||||| ||||| || |||||||||||||| | |||||| |||| ||| ||||||||||| |||||||||| |||||    
T  38988717 taaattaagtaataattttttaataatgttaaagtgtttaatttccaatgcactttattacataaatattttataaaaagttatcatttaaagtgcttaa 38988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 18926320 - 18926425
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| |||||||||||  ||||| | | ||||||| |||||||| || |||   |||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  18926320 ggcactctttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaatacacaacttttcataaaaagttac 18926419  T
Q  119 cattta 124  Q
    ||||||    
T  18926420 cattta 18926425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 31498737 - 31498660
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 101  Q
    ||||||| ||| ||||||||||||| |||||||| ||||||| |||||||||||||| |||| || ||||| ||||||    
T  31498737 tctttaaacattctaaattaagtaaatatttttttaaaatgttaaagttttcaattttcaatacattgattgcacaaa 31498660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 46716177 - 46716266
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||| ||| ||||||||| |||||||| ||||||||| |||||||||||||| | ||||||| | |||| ||||| ||| |||||||    
T  46716177 tctttaaccattctaaattaaataattattctttaaaaatatcaaagttttcaatgttcaatgcattaattatacaaacttttataaaaa 46716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 38452192 - 38452283
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 138  Q
    ||||||||| |||||| ||||||  ||||||||||| ||||| || ||||||| |||||||||| || ||| | ||||||| ||||||||||    
T  38452192 aattattttataaaaaagtcaaatatttcaatttccgatgcattggttacacatattttcataataaattatcttttaaaggccttaactag 38452283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 10032029 - 10031919
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| | ||| | |||||||||||||| |||| || |||  |||| |||||||||||| ||||||||||  |||||||||| |  ||| ||||    
T  10032029 tctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgattacacactttttcataaatacatactattt 10031930  T
Q  124 aaagtccttaa 134  Q
    | |||||||||    
T  10031929 atagtccttaa 10031919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 26872891 - 26872781
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccattta 124  Q
    ||||||||| |||||| ||||||||||| |||| |||| |||||  |||||||||||||||||  | |||| ||||| ||||| ||||| |||  |||||    
T  26872891 tttaagcattctaaatcaagtaattattatttataaatatcaaaagtttcaatttccaatgcattttattatacaaactttcacaaaaaattattattta 26872792  T
Q  125 aagtccttaac 135  Q
    ||||| |||||    
T  26872791 aagtctttaac 26872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 35395904 - 35395962
Alignment:
Q  22 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaattt 80  Q
    |||||||||| || ||| |||||||||||||||||||||||| |||||||||| |||||    
T  35395904 attctttaagtattctatattaagtaattattttttaaaaatatcaaagtttttaattt 35395962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 47507603 - 47507713
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| |||||||| || |||||  ||| ||| ||||| ||||||  |||||| ||||||||||| ||| | ||||||||||  ||||||| | |||||||    
T  47507603 ggcactctttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtattgattacacattttttcatgagaagttac 47507702  T
Q  119 catttaaagtc 129  Q
    |||||||||||    
T  47507703 catttaaagtc 47507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 3256740 - 3256648
Alignment:
Q  20 gcattctttaagcatactaaattaagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    |||||||||||||||   ||| |||| ||||||| ||||||||  ||||||  |||| |||||||||||||||| |||||| |||||||||||    
T  3256740 gcattctttaagcatttcaaaataagcaattattctttaaaaaaagtcaaatgtttcgatttccaatgcactgaatacacatattttcataaa 3256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 32699395 - 32699447
Alignment:
Q  65 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||||||    
T  32699395 tcaaaattttcaatttcaaatgcactgattgcacaaactttcataaaaagtta 32699447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 41431199 - 41431099
Alignment:
Q  24 tctttaagcatactaaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 122  Q
    |||||||||||  ||||||||| ||||||||||| |||||  | |||  |||||||||| |||| | ||||||| || ||||||||||||| ||||||||    
T  41431199 tctttaagcattttaaattaagaaattatttttttaaaaaaattaaatatttcaatttctaatgtattgattactcatattttcataaaaacttaccatt 41431100  T
Q  123 t 123  Q
    |    
T  41431099 t 41431099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 1360534 - 1360609
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 99  Q
    ||||||||||| | ||| | ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||    
T  1360534 tctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattgattacaca 1360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 9097802 - 9097685
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||||||||  |||  |||||||||  |||||  |||||  ||||||||||||||||| | | |||||| ||||||||||| | |||||| ||    
T  9097802 tctttaagcatactaatataaacaattattttaaaaaaaa-tcaaatatttcaatttccaatgcaattaatacacacattttcataaatacttaccactt 9097704  T
Q  124 aaagtccttaactagtgcc 142  Q
      |||| ||||||||||||    
T  9097703 gtagtctttaactagtgcc 9097685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 33887960 - 33887887
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 97  Q
    ||||||||||| | ||| ||| |||||||| |||||||| ||||||  ||||||||| ||||||| ||||||||    
T  33887960 tctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattaca 33887887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 35496681 - 35496576
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatt 122  Q
    ||||||||||| | ||||| ||||| ||| |||| |||| |||||   || |||||| ||||||| | ||||||||| |||||| |||||| ||||||||    
T  35496681 tctttaagcatccaaaatttagtaactatatttttaaaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttaccatt 35496582  T
Q  123 taaagt 128  Q
    ||||||    
T  35496581 taaagt 35496576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 35599910 - 35599817
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    ||||||| |||||||||||| | ||||||| ||||||||  |||||   ||||| || ||||||| ||| |||| || ||||||||||||||||    
T  35599910 tctttaaacatactaaattaggaaattattctttaaaaaattcaaatagttcaaatttcaatgcattgaatacataacttttcataaaaagtta 35599817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 48837977 - 48838025
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 86  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  48837977 taaattaaataattatttt-taaaaatatcaaagttttcaatttccaatg 48838025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 27123267 - 27123383
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttc-ataaaaagtta 117  Q
    |||| ||||||||||| | ||||| |||||| ||| ||| |||| |||||   || |||||||||||||| | | ||||||| |||||  |||||| |||    
T  27123267 ggcactctttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgcattaagtacacaacttttcgttaaaaactta 27123366  T
Q  118 ccatttaaagtccttaa 134  Q
    ||||||||||| |||||    
T  27123367 ccatttaaagtgcttaa 27123383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 31902839 - 31902747
Alignment:
Q  42 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||| |||||||  |||| || ||||||  ||||||||| |||| || ||| ||||||| ||| |||||||| |||| |||||||||||||||    
T  31902839 taagaaattattccttaagaaagtcaaatatttcaattttcaatacattgactacacaattttccataaaaatttactatttaaagtccttaa 31902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 47305567 - 47305516
Alignment:
Q  91 gattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||||||| |||||||| | |||||||||||||||  ||||||||||||||    
T  47305567 gattacacatattttcatgataagttaccatttaaacaccttaactagtgcc 47305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 6392179 - 6392237
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttcc 82  Q
    ||||||||||| |||||||||| ||||||| ||| ||||  | ||||||||||||||||    
T  6392179 tctttaagcattctaaattaagaaattattctttcaaaacttaaaagttttcaatttcc 6392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 10453485 - 10453539
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 101  Q
    ||||||| ||||||||| | ||| |||||||||| ||||||| ||||||||||||    
T  10453485 aattattctttaaaaatattaaaattttcaattttcaatgcattgattacacaaa 10453539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 34398159 - 34398074
Alignment:
Q  48 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||||||||| ||||||   |||||||| ||||||| |||  ||||||||||| || |||| ||| ||||||||||| ||||    
T  34398159 attattttttaaaaaggtcaaatacttcaattttcaatgcattgaaaacacaaatttttat-aaaatttatcatttaaagtctttaa 34398074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 8327909 - 8327824
Alignment:
Q  52 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 137  Q
    ||||||||||| |||||||  ||||||||||||| || | | |||||||| ||| ||||||  ||||||||| | || ||||||||    
T  8327909 ttttttaaaaaagtcaaagacttcaatttccaatacaataaatacacaaacttttataaaatcttaccattttatgtgcttaacta 8327824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 17883398 - 17883317
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 128  Q
    |||||||||||||||| ||||||   || ||||||||| ||| ||||| || ||||||| | ||||| |||| |||||||||    
T  17883398 aattattttttaaaaaagtcaaaaactttaatttccaacgcattgatttcataaattttgacaaaaacttactatttaaagt 17883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 40722382 - 40722459
Alignment:
Q  49 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    ||||| ||||| || ||||||  ||||||||| ||||||| | ||||||||||||  |||||||| |||| |||||||    
T  40722382 ttattctttaagaaagtcaaatatttcaattttcaatgcattaattacacaaattaccataaaaacttactatttaaa 40722459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25176401 - 25176329
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg 91  Q
    |||| ||||||| |||  |||||||  |||||||| ||| ||||||||||| |||||||||||  ||||||||    
T  25176401 ggcactctttaaacatgttaaattagataattattcttttaaaatgtcaaatttttcaatttctgatgcactg 25176329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 26239652 - 26239544
Alignment:
Q  21 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttacc 119  Q
    |||| |||||| |||||||||| || ||||||| ||| |||| || || ||||  | ||||||||||| ||| || |||| |||||| |||||| ||||     
T  26239652 cattttttaaggatactaaatttagcaattattctttcaaaaagttaacgtttatagtttccaatgcattgaatatacaatttttcattaaaaacttact 26239553  T
Q  120 atttaaagt 128  Q
    |||||||||    
T  26239552 atttaaagt 26239544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 35567135 - 35567215
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaa 126  Q
    |||||||||||||||| ||||||  ||| |||||||||| || | | |||||| ||||| || ||||||||| ||||||||    
T  35567135 aattattttttaaaaaagtcaaatattttaatttccaatacattaaatacacatatttttataaaaaagttatcatttaaa 35567215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 37352484 - 37352436
Alignment:
Q  59 aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 107  Q
    |||| ||||||  ||||||||||||||||| | ||||||||||||||||    
T  37352484 aaaaagtcaaatatttcaatttccaatgcattaattacacaaattttca 37352436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 4e-43; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 1876595 - 1876479
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1876595 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactgattacacaaactttcataaaaaattac 1876496  T
Q  119 catttaaagtccttaac 135  Q
    |||||||||||||||||    
T  1876495 catttaaagtccttaac 1876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 12002260 - 12002383
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12002260 ggcactctttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgattacacaaatttttataaaaagttac 12002359  T
Q  119 catttaaagtccttaactagtgcc 142  Q
     ||||||  |||||||| ||||||    
T  12002360 tatttaagatccttaaccagtgcc 12002383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 14016980 - 14016857
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||| ||||||| ||| ||| ||||| | ||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  14016980 ggcactctttaagcatgctaaataaagtaatgattctttcaaaatttaaaagttttcaatttccaatgcactgatcacacaaacttttataaaaaattac 14016881  T
Q  119 catttaaagtccttaactagtgcc 142  Q
     |||||| ||||||||||||||||    
T  14016880 tatttaaggtccttaactagtgcc 14016857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 11533230 - 11533345
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||| |||||||||    
T  11533230 tctttaaacatgttaaattaataaattattctttaaaaatgtcaaagttttcaatttccaatgcactgaaggcacaaactttcataaaaaattaccattt 11533329  T
Q  124 aaagtccttaactagt 139  Q
    || | |||||||||||    
T  11533330 aaggcccttaactagt 11533345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 44220814 - 44220716
Alignment:
Q  28 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  44220814 taagcatgttaaattaagtaattattcttttaaaatgtcaaagttttcaatttccaatgcactcattacacaaacgtccataaaaatttaccatttaaa 44220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 31844331 - 31844214
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtta 117  Q
    |||| |||||||  || ||||||||||||||||||  ||||||| ||||||||||| |||||||||||||| | |||| ||||| |||||||||||||||    
T  31844331 ggcactctttaaatattctaaattaagtaattattccttaaaaaagtcaaagttttgaatttccaatgcacttcattatacaaactttcataaaaagtta 31844232  T
Q  118 ccatttaaagtccttaac 135  Q
    | ||||||||||||||||    
T  31844231 ctatttaaagtccttaac 31844214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 32271170 - 32271278
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    |||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||| ||| || |||||||||||| || ||||||||| ||||||||||    
T  32271170 tttaagcattttaaattaagaaattattttttaaaaatgttaaagttttcaatttctaattcattgattacacaaacttccataaaaagataccatttaa 32271269  T
Q  126 agtccttaa 134  Q
     ||| ||||    
T  32271270 tgtctttaa 32271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 36907841 - 36907916
Alignment:
Q  67 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||||||||| ||||||||    
T  36907841 aaagttttcaatttccaatgcaatgattacacaaacttttataaaaagttactatttaaagtccttagctagtgcc 36907916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 39594597 - 39594486
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || |||||||||| ||||||| |||| |||| |||||||||||||||| || | ||||||||| ||||| ||||||||||||||| |||||    
T  39594597 tctttaagaatgctaaattaagaaattattctttataaatatcaaagttttcaattttcattacactgattatacaaactttcataaaaagttatcattt 39594498  T
Q  124 aaagtccttaac 135  Q
    ||  ||||||||    
T  39594497 aagatccttaac 39594486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 40629062 - 40628964
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||||||||||||  |||||||||| |||||||| |||||||||| ||||||||||||||| ||| ||||||  |||| |||||| |||||||||    
T  40629062 taaattaagtaattattcattaaaaatgttaaagtttttaatttccaattcactgattacacaaacttttataaaagattactatttaaggtccttaac 40628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 38019526 - 38019418
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||||||| ||||||| ||||||| | | |||||||||||| || ||||||| ||||||||| | |||||||||| ||||||||||    
T  38019526 tctttaagcatgctaaattaagaaattattctttaaaatttttaaagttttcaatctctaatgcac-gattacacatactttcataaaatgttaccattt 38019428  T
Q  124 aaagtcctta 133  Q
    || |||||||    
T  38019427 aatgtcctta 38019418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 44907218 - 44907318
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 124  Q
    ||||||| | ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| || |||| || ||||||||||| |||| |||||    
T  44907218 tttaagctttctaaattaagtaattattttttaaaaatgtcaaactttttcaattttcaatgcactaataacactaactttcataaaaatttactattta 44907317  T
Q  125 a 125  Q
    |    
T  44907318 a 44907318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 7627955 - 7627844
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||  |||||||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| ||||||| ||||||||||| ||||  |||    
T  7627955 tctttaaacatgttaaattaagtaattatttttaaaaaatgtgaaagtttttaatttctaatacactgatcacacaaactttcataaaaaattacttttt 7627856  T
Q  124 aaagtccttaac 135  Q
    | |||| |||||    
T  7627855 atagtcattaac 7627844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 38047718 - 38047607
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 122  Q
    ||||||||||| ||||||||||||||| || |||| ||||||||||  ||| |||||  ||||||||  |||||||||| ||||||| ||||||| ||||    
T  38047718 tctttaagcattctaaattaagtaatttttctttataaatgtcaaaaattttaatttttaatgcactttattacacaaactttcatataaagttatcatt 38047619  T
Q  123 taaagtccttaa 134  Q
    ||||||||||||    
T  38047618 taaagtccttaa 38047607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 2376836 - 2376726
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||||||  |||||||| |||||||| ||||||||| ||||||||||||||||| || | | | |||| | ||| |||||||||||||||| ||||    
T  2376836 tctttaagcattttaaattaaataattattctttaaaaatatcaaagttttcaatttctaacgtattaattatataaactttcataaaaagttactattt 2376737  T
Q  124 aaagtccttaa 134  Q
    || ||||||||    
T  2376736 aaggtccttaa 2376726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 20522943 - 20523031
Alignment:
Q  25 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||||||||| |||| ||||||||||||| ||| ||||| | |||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  20522943 ctttaagcatgctaagttaagtaattattctttcaaaatttaaaagttttcaattttcaatgcactaattacataaactttcataaaaa 20523031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 37449531 - 37449626
Alignment:
Q  17 gtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 112  Q
    ||||||||| |||| |||  ||||||||||||||||||||| ||||||||||| |||||||||| |||| |||| ||||| | || ||||||||||    
T  37449531 gtggcattccttaaacattttaaattaagtaattatttttttaaaatgtcaaacttttcaattttcaatacactaattacgctaactttcataaaa 37449626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 1773915 - 1773799
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt--caatttccaatgcactgattacacaaattttcataaaaagtt 116  Q
    |||| ||||||||| | ||||||||||| |||||||||||||| ||||||| ||||  |||||||||||||||| ||| |||  | ||||||||||  ||    
T  1773915 ggcagtctttaagctttctaaattaagttattattttttaaaa-tgtcaaacttttttcaatttccaatgcactaattgcacttactttcataaaagttt 1773817  T
Q  117 accatttaaagtccttaa 134  Q
    || |||||||||||||||    
T  1773816 actatttaaagtccttaa 1773799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 1445242 - 1445137
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||||| | ||||||||||||||   | ||||| ||||||||||| |||||||| |||||||| | |||||||||| ||| | ||||||||||||||    
T  1445242 tctttaagctttctaaattaagtaatatctctttaataatgtcaaagtgttcaattttcaatgcactttattacacaaacttttagaaaaagttaccatt 1445143  T
Q  123 taaagt 128  Q
    ||||||    
T  1445142 taaagt 1445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 31264985 - 31265094
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||||| ||||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||||    
T  31264985 cctgtggcactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaa 31265084  T
Q  114 gttaccattt 123  Q
    ||||| ||||    
T  31265085 gttactattt 31265094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 41960083 - 41959978
Alignment:
Q  31 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtc 129  Q
    |||| ||| ||| |||||||||| ||||||||||| |||||||| |  ||||||||||||  |||| ||||| ||||||||||| ||| |||||||||||    
T  41960083 gcattctacatttagtaattattctttaaaaatgttaaagttttaagcttccaatgcactttattatacaaactttcataaaaaattatcatttaaagtc 41959984  T
Q  130 cttaac 135  Q
    ||||||    
T  41959983 cttaac 41959978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 18842363 - 18842275
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 112  Q
    ||||||| |||  ||||||||||||||||| |||||||||||||||||||| |||||  |||| | |||||||||||| ||| ||||||    
T  18842363 tctttaaccattttaaattaagtaattattctttaaaaatgtcaaagtttttaatttttaatgtattgattacacaaacttttataaaa 18842275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 30486620 - 30486719
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaac 135  Q
    ||||| ||||||||||| ||| ||||| | |||||||| |||||  ||||||||||||||||||| ||| || ||||| |||| ||||||||||||||||    
T  30486620 taaataaagtaattattcttttaaaatttaaaagtttttaatttataatgcactgattacacaaacttttataaaaaaattactatttaaagtccttaac 30486719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 39691222 - 39691112
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| | | |||||  ||||||| |||||||| ||||||   |||||||| ||||||| ||| |||||||||||||||||||| |||| ||||    
T  39691222 tctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacacaaattttcataaaaaattactattt 39691123  T
Q  124 aaagtccttaa 134  Q
    ||  |||||||    
T  39691122 aagatccttaa 39691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 4278957 - 4279056
Alignment:
Q  42 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 141  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| |||  |||||||||| |||||  ||||  |||||| |||| |||||| |||||||    
T  4278957 taagtaattattttataaaaatgataaagttttcaatttccaatacac-cattacacaaactttcaccaaaaagtaccatctaaaatccttacctagtgc 4279055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 5020160 - 5020051
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || |||||  ||| ||| ||||| |||||| ||||||| ||||||||||| || || |||||||||  |||||||| | ||||||||||||    
T  5020160 tctttaaggattctaaaagaagaaataattttataaaaaagtcaaagatttcaatttccgatacattgattacac--attttcatgacaagttaccattt 5020063  T
Q  124 aaagtccttaac 135  Q
    |||| |||||||    
T  5020062 aaaggccttaac 5020051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 24869402 - 24869497
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa-ttttcataaaa 112  Q
    ||||||||| ||||||| ||| |||||||||||||||||| | |||||||     | |||||||||||||||||||| |||||| ||| |||||||||||    
T  24869402 cctgtggcactctttaaacatgctaaattaagtaattattctctaaaaat-----atttttcaatttccaatgcactaattacataaacttttcataaaa 24869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 35501176 - 35501064
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||| ||| ||| ||| |||||||| | ||| ||||| | |||||||| |||||||||||||| | |||||||||| ||| ||||||| |||  |||    
T  35501176 tctttaaacattctacatttagtaattaatctttgaaaatattaaagtttttaatttccaatgcactttattacacaaacttttataaaaatttaatatt 35501077  T
Q  123 taaagtccttaac 135  Q
    |||||||||||||    
T  35501076 taaagtccttaac 35501064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 35592455 - 35592539
Alignment:
Q  42 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||| ||||||||  |||||| ||||||  ||||||||||||| ||| |||| | |||||||| |||||||||||||||||||||    
T  35592455 taagaaattatttcgtaaaaaagtcaaatatttcaatttccaaggcaatgatcagacaaatttccataaaaagttaccatttaaa 35592539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 14453699 - 14453794
Alignment:
Q  44 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 141  Q
    ||||||||||   |||||||||||||||||| ||||| |||||||| | |||||||||||||||| ||||  ||| ||||||||||| |||||||||||    
T  14453699 agtaattattccataaaaatgtcaaagtttttaattttcaatgcactttattacacaaattttcacaaaa--tta-catttaaagtctttaactagtgc 14453794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 34722837 - 34722774
Alignment:
Q  73 ttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||| |||||||||  |||| ||||| |||||||||||||||||||||||||||||||||    
T  34722837 ttcaattttcaatgcactttattatacaaactttcataaaaagttaccatttaaagtccttaac 34722774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 30158170 - 30158108
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 86  Q
    ||||||||||| ||||||||| |||||||| ||| ||||||| |||||||| |||||||||||    
T  30158170 tctttaagcattctaaattaaataattattctttgaaaatgtaaaagtttttaatttccaatg 30158108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 37564440 - 37564346
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||| ||| |||||||||| ||||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||| |||||    
T  37564440 tctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaatacacaagttttcataaaaggttac 37564346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 9629925 - 9629833
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||| | |||| |||||||||||||||| |||||||| ||| |||| |||||| ||||||| ||||||||  |||||||||||||| ||||    
T  9629925 tttaagctttctaatttaagtaattattttt-aaaaatgtaaaactttttcaattttcaatgcattgattacattaattttcataaaaatttac 9629833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 12782775 - 12782888
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||||||||| || | ||||||| |||||||| ||  ||  |||| |||||||||||| | |  ||||| ||||||||||| | |||||| ||    
T  12782775 tctttaagcatactaaaatatgcaattattctttaaaaaagttgaatatttcgatttccaatgcaattaacacacacattttcataaatatttaccactt 12782874  T
Q  124 aaagtccttaacta 137  Q
    | ||||||||||||    
T  12782875 atagtccttaacta 12782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 26014833 - 26014752
Alignment:
Q  53 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||| |||||||| ||  ||||||| |||||||||||||||||||||||  || |||||||||||| |||||  ||||||||    
T  26014833 ttttgaaaaatgttaatattttcaagttccaatgcactgattacacaaacatttataaaaagttactatttatggtccttaa 26014752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 42636479 - 42636363
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 117  Q
    |||| ||||||||||| | ||||| |||||||||| || ||||| |||||   || |||||| ||||||| | | ||||||| |||||| |||||| |||    
T  42636479 ggcactctttaagcatcccaaatttagtaattattattcaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 42636380  T
Q  118 ccatttaaagtccttaa 134  Q
    ||||||||||| |||||    
T  42636379 ccatttaaagtgcttaa 42636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 27506079 - 27505970
Alignment:
Q  33 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 132  Q
    |||||||||||||  |||||||||| |||| || |||  ||||||||| ||||||||| ||||||||| ||||  |||||| |||| |||||| ||| ||    
T  27506079 atactaaattaagatattatttttttaaaa-gtgaaatatttcaattttcaatgcactaattacacaattttttgtaaaaatttacaatttaaggtcatt 27505981  T
Q  133 aactagtgcca 143  Q
    ||  |||||||    
T  27505980 aaagagtgcca 27505970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 9005010 - 9005043
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaa 69  Q
    ||||||||||||||||||||||||||||||||||    
T  9005010 ctaaattaagtaattattttttaaaaatgtcaaa 9005043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 37813516 - 37813423
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    |||| |||||||| || | ||||| |||||||||| ||||||||| |||||   || |||||||||||||| ||| ||||||| ||||||||||    
T  37813516 ggcactctttaaggatcccaaatttagtaattattcttttaaaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcataaa 37813423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 43419827 - 43419730
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||| |||| |||||||||||||||| || |||  ||| |||||  ||| || | |||| ||||||||||||||||| ||| |||||||||| |||||    
T  43419827 taaaataagaaattattttttaaaaaagttaaatattttaatttgtaatacatttattatacaaattttcataaaaacttaacatttaaagtacttaa 43419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 43841043 - 43841124
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||||||||| ||||||||| | ||| ||||||||||  |||  | |||||||||||||||| | ||||| ||||    
T  43841043 taaattaagtaattattctttaaaaatattaaatttttcaatttttaatatattgattacacaaatttttacaaaaaattac 43841124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 24103159 - 24103087
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattac 96  Q
    ||||||||||| ||||| |||| ||||||||||| |||| ||||||  |||| |||||| ||||| |||||||    
T  24103159 tctttaagcattctaaaataagaaattatttttttaaaaggtcaaatgtttcgatttccgatgcaatgattac 24103087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 34336581 - 34336477
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || || ||| ||| ||||||| |||||||| ||||||   |||||||||||||||| ||||| || ||| ||| | ||||| |||| ||||    
T  34336581 tctttaaggattcttaataaagaaattattctttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaactttgacaaaaacttactattt 34336482  T
Q  124 aaagt 128  Q
    |||||    
T  34336481 aaagt 34336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 41106092 - 41105996
Alignment:
Q  38 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||| ||||| |  ||||||| ||||||   |||||||| ||||||| ||| | ||||| ||||| |||||| ||||||||||| ||||||||    
T  41106092 aaattaagaaattaatcattaaaaaagtcaaatagttcaattttcaatgcattgaattcacaatttttcgtaaaaacttaccatttaaggtccttaa 41105996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 42801078 - 42801162
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 110  Q
    |||||| || ||||| |||||||||||| |||| ||| | ||||  ||||||||| ||||||| | |||||||| ||||||||||    
T  42801078 tttaagtattctaaaataagtaattattctttacaaaaggcaaatatttcaattttcaatgcattaattacacacattttcataa 42801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 7931765 - 7931812
Alignment:
Q  76 aatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||| ||||| | |||||||||||||||||| |||||||||||||||    
T  7931765 aattttcaatgtattgattacacaaattttcaaaaaaagttaccattt 7931812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 45368808 - 45368729
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    ||||||||| |||||| || |||  ||||||||| | ||||| |||||| ||| |||||||| | |||||||||||||||    
T  45368808 aattattttataaaaaagttaaatatttcaattttcgatgcaatgattatacatattttcatgataagttaccatttaaa 45368729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 33636716 - 33636810
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||| |||||   || ||||||||  |||||| ||||||  ||||||||||||||||| | |||||| ||  ||||| ||||||||||    
T  33636716 tctttaagcattctaaaaggagaaattatttcataaaaaagtcaaatgtttcaatttccaatgcaataattacaaaatatttcaaaaaaagttac 33636810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 32133735 - 32133686
Alignment:
Q  92 attacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 141  Q
    |||||||||| ||||||||||| |||| ||||||| |||||||| |||||    
T  32133735 attacacaaactttcataaaaaattactatttaaattccttaaccagtgc 32133686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 41385258 - 41385351
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 112  Q
    |||||||||||||||  | ||| |||| |||||||  |||| || |||| |  ||||||||| ||||| | |||||||||||||||||| ||||    
T  41385258 ggcattctttaagcaatccaaaataagaaattattccttaagaaagtcagatgtttcaattttcaatgtattgattacacaaattttcacaaaa 41385351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 42022701 - 42022640
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaat 85  Q
    |||||||||||  ||||||||  |||||||||||||||| ||||||   |||||||||||||    
T  42022701 tctttaagcattttaaattaaaaaattattttttaaaaaagtcaaatagttcaatttccaat 42022640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 6270334 - 6270418
Alignment:
Q  42 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||| ||||||||  ||||| |||||||  ||||||||| ||||  | | |||||||||||||| |||||||  |||||||||||    
T  6270334 taagaaattatttcataaaactgtcaaatatttcaattttcaatatattaattacacaaatttttataaaaaaataccatttaaa 6270418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 33285963 - 33285923
Alignment:
Q  94 tacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||| |||||||||||| |||| |||||||||||||||    
T  33285963 tacacaatttttcataaaaatttactatttaaagtccttaa 33285923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 33949658 - 33949571
Alignment:
Q  24 tctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    |||||||||||| |||||| ||||| |||| |||||||||| ||||   || ||||||| |||||||| | ||||||| ||||||||||    
T  33949658 tctttaagcatattaaatttagtaagtattgttttaaaaat-tcaactattacaatttcaaatgcactcaatacacaacttttcataaa 33949571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 44254203 - 44254131
Alignment:
Q  56 ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 128  Q
    ||||||| ||||||   |||||||||||||||| ||||| || ||||||| | ||||| |||| |||||||||    
T  44254203 ttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaattttgacaaaaacttactatttaaagt 44254131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 44960519 - 44960571
Alignment:
Q  82 caatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||| |||||||| ||||||||||||||| |||| ||| ||||| |||||    
T  44960519 caatgcattgattacataaattttcataaaaatttactattaaaagtgcttaa 44960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 53261556 - 53261674
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  53261556 tctttaagcatgctaaattaagtaattattctttaaaaatttaaaagttttcaatttccaatgcagtgattacacaaacttttataaaaagttactattt 53261655  T
Q  124 aaagtccttaactagtgcc 142  Q
    |||||||||||| ||||||    
T  53261656 aaagtccttaacgagtgcc 53261674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 40252654 - 40252771
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||| |||||||||||||| || ||||||||||| |||||||||||||| |||| || ||||||||| || ||||||||||| |||| ||||    
T  40252654 tctttaaacatattaaattaagtaattgttatttaaaaatgttaaagttttcaattttcaatacattgattacac-aactttcataaaaatttactattt 40252752  T
Q  124 aaagtccttaactagtgcc 142  Q
    |||||||||||| ||||||    
T  40252753 aaagtccttaaccagtgcc 40252771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 49951798 - 49951717
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 105  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  49951798 tctttaagcatgctaaattaagtaattattcttttaaaatgtcaaagttttcaattttcaatgcaccgattacacaaatttt 49951717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 36876167 - 36876064
Alignment:
Q  22 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccat 121  Q
    ||||||||||||| ||||||||||||| |||| ||| ||||||| || |||||||||||||||| || |||||||||||| ||| ||||||||||||||     
T  36876167 attctttaagcatgctaaattaagtaactattcttttaaaatgtaaatgttttcaatttccaatacattgattacacaaacttttataaaaagttaccac 36876068  T
Q  122 ttaa 125  Q
    ||||    
T  36876067 ttaa 36876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 53622301 - 53622420
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 122  Q
    ||||||| |||  |||||||||||||| |||||| ||||||||||| |||||||||||||   ||||  |||||||||||||||| ||||||||| ||||    
T  53622301 tctttaaacatcttaaattaagtaattttttttttaaaatgtcaaaattttcaatttccagctcactttattacacaaattttcagaaaaagttatcatt 53622400  T
Q  123 taaagtccttaactagtgcc 142  Q
    |||||| |||||||||||||    
T  53622401 taaagttcttaactagtgcc 53622420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 45743309 - 45743414
Alignment:
Q  20 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 119  Q
    ||||| |||||| ||  ||||||||| ||||||| |||||||||||||||||||||||||| |||| || ||||||||||| |||||||||| ||||||     
T  45743309 gcattttttaagtatgttaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatacagtgattacacaacttttcataaagagttact 45743408  T
Q  120 atttaa 125  Q
    ||||||    
T  45743409 atttaa 45743414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 52650798 - 52650697
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| ||| |||||||||| ||||||| |||| |||||||||| |||||||||| |||| |||||||||||||| |||||||||||| |||| ||||    
T  52650798 tctttaaacatgctaaattaagaaattattctttacaaatgtcaaaattttcaattttcaattcactgattacacaatttttcataaaaaattactattt 52650699  T
Q  124 aa 125  Q
    ||    
T  52650698 aa 52650697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 37461585 - 37461462
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagtta 117  Q
    |||| ||||||| ||| ||||||||||||||||  |||||||| ||||||||||||||||||  ||||||| ||||||||||| ||||||| |||| |||    
T  37461585 ggcactctttaaacatgctaaattaagtaattaaattttaaaa-tgtcaaagttttcaatttttaatgcaccgattacacaaactttcataaaaaaatta 37461487  T
Q  118 ccatttaaagtccttaactagtgcc 142  Q
    ||||||| | |||||||||| ||||    
T  37461486 ccatttataatccttaactaatgcc 37461462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 3179113 - 3179003
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 124  Q
    |||||| || |||||| ||||||||| |||||||||| || ||||||||||||||||||| ||| | |||||||||| |||||||||||||||| |||||    
T  3179113 tttaagtattctaaatcaagtaattaatttttaaaaaagttaaagttttcaatttccaatacactttattacacaaactttcataaaaagttactattta 3179014  T
Q  125 aagtccttaac 135  Q
     |||| |||||    
T  3179013 tagtctttaac 3179003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 31262914 - 31263014
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||  |||| ||||| |||||||| ||| ||||||||||  |||||    
T  31262914 tctttaagcattctaaattaagtaattatttt-taaaaatgtcaaagttttcgattttgaatgtactgactacacaaacttttataaaaagttgtcattt 31263012  T
Q  124 aa 125  Q
    ||    
T  31263013 aa 31263014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 47937861 - 47937962
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||| | |||| ||| || |||||| ||||||||||| ||| |||||    
T  47937861 tctttaaacatactaaattatgtaattattctttaaaaaagtcaaagttttcaattttctatgctctgtttgcacaaactttcataaaaaattatcattt 47937960  T
Q  124 aa 125  Q
    ||    
T  47937961 aa 47937962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 49795138 - 49795254
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagtta 117  Q
    |||| |||||||||||||||||| |||||||||||||||  |||| | ||| |||||||||| |||||||| ||||||||||| ||| || ||||| |||    
T  49795138 ggcactctttaagcatactaaataaagtaattatttttt-taaatttaaaaattttcaattttcaatgcaccgattacacaaacttttataaaaaaatta 49795236  T
Q  118 ccatttaaagtccttaac 135  Q
    | ||||||||||||||||    
T  49795237 ctatttaaagtccttaac 49795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 38354577 - 38354473
Alignment:
Q  37 taaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| || ||| ||||||  ||||||||||| ||| ||| |    
T  38354577 taaattaagtaattatttttttaaaaatgtcaaacttttcaatttctaatacactgattacactaactttaataaaagtttaccatttaaggtctttagc 38354478  T
Q  136 tagtg 140  Q
    |||||    
T  38354477 tagtg 38354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 17970803 - 17970917
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||| |||||||||||  |||||||||||||||||  || ||||| |||||| ||||||||||||||||||||||||||   || ||| || ||||||||    
T  17970803 ggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagtta 17970899  T
Q  118 ccatttaaagtccttaac 135  Q
    |||||||||||| |||||    
T  17970900 ccatttaaagtctttaac 17970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 23136612 - 23136539
Alignment:
Q  27 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaa 100  Q
    ||||| ||| ||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||    
T  23136612 ttaagtatattaaattaagtaattattcttttaaaatttaaaagttttcaatttccaatgcactgattacacaa 23136539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 41370262 - 41370166
Alignment:
Q  38 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||| |||||||| | ||||| || |||  ||||||||| ||||||| |||||||||||||||||||||||| |||| ||| |||||||||||    
T  41370262 aaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattgattacacaaattttcataaaaacttactattcaaagtccttaa 41370166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 50617494 - 50617606
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||| ||| || |||||| |||| | | |||||    
T  50617494 tctttaaacattataaattaagtaattatttttttaaaatgtcaaacttttcaatttttaatgcactgattgcactaactttcatcaaaattgatcattt 50617593  T
Q  124 aaagtccttaact 136  Q
    || || |||||||    
T  50617594 aaggttcttaact 50617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 4391968 - 4392067
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagt-tttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 124  Q
    |||||| || ||||||| |||||||||| |||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||||| ||| ||||||    
T  4391968 tttaagtattctaaatttagtaattattctttaaaaatgtcaaaaaatttcaattttcaatacactgattacacaaatttttataaaaatttatcattta 4392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 35153262 - 35153368
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||| | |||||| ||||||||||| |||||||||||||| |||||||| | ||| |||||| ||| |||||||||||| |||||||||| |||      
T  35153262 taaattaaatcattattctttaaaaatgttaaagttttcaattttcaatgcactttattgcacaaacttttataaaaagttactatttaaagtctttatt 35153361  T
Q  136 tagtgcc 142  Q
    |||||||    
T  35153362 tagtgcc 35153368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 25042837 - 25042743
Alignment:
Q  25 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||||| ||||||||||||    || ||||||||||| ||| ||||||||||| |||| |||||||||||||| ||| ||||||||||| |||||    
T  25042837 ctttaagcatgctaaattaagta----ttctttaaaaatgttaaaattttcaatttctaatgtactgattacacaaacttttataaaaagttaacattt 25042743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 21687699 - 21687591
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagtta 117  Q
    |||| ||||||||| | |||| |||||||||  || ||||| ||| ||||||| |||||||| |||||||||  |||||||||| ||| |||||||||||    
T  21687699 ggcactctttaagctttctaagttaagtaatatttctttaataatatcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagtta 21687600  T
Q  118 ccatttaaa 126  Q
    |||||||||    
T  21687599 ccatttaaa 21687591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 32175431 - 32175548
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 122  Q
    |||||||||||  |||||||||||||||||   ||||| |||||  ||||||||||| ||||| |||  ||| |||||| ||||| ||||||||| ||||    
T  32175431 tctttaagcattttaaattaagtaattattccataaaagtgtca--gttttcaattttcaatgtactttattgcacaaactttcacaaaaagttatcatt 32175528  T
Q  123 taaagtccttaactagtgcc 142  Q
    ||||||| ||||||||||||    
T  32175529 taaagtctttaactagtgcc 32175548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 22889253 - 22889376
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||| | | ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  |||     
T  22889253 ggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttat 22889352  T
Q  119 catttaaagtccttaactagtgcc 142  Q
    ||||||| ||| ||||| ||||||    
T  22889353 catttaaggtcattaacgagtgcc 22889376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 22940917 - 22941040
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||| | | ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  |||     
T  22940917 ggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttat 22941016  T
Q  119 catttaaagtccttaactagtgcc 142  Q
    ||||||| ||| ||||| ||||||    
T  22941017 catttaaggtcattaacgagtgcc 22941040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 2063473 - 2063567
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | |||||||||||||||||||||||||    
T  2063473 tctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaaattttcataaaaagttac 2063567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 18939967 - 18939858
Alignment:
Q  33 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 132  Q
    ||||||||||||||||||||| ||||||||  | ||| ||||||||||  |||| | |  || |||||| ||| ||||||||||| | ||||| ||||||    
T  18939967 atactaaattaagtaattattctttaaaaaaattaaaattttcaatttttaatgtatttgttgcacaaacttttataaaaagttatcttttaaggtcctt 18939868  T
Q  133 aactagtgcc 142  Q
    ||||||||||    
T  18939867 aactagtgcc 18939858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 8297864 - 8297980
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 117  Q
    |||| ||||||||||| | ||||| |||||||||| ||| ||||||||||   || |||||||||||||| | | ||||||| |||||| |||||| |||    
T  8297864 ggcactctttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttccaatgcattcaatacacaatttttcattaaaaactta 8297963  T
Q  118 ccatttaaagtccttaa 134  Q
    | ||||||||| |||||    
T  8297964 ctatttaaagtgcttaa 8297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 20022234 - 20022306
Alignment:
Q  70 gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||||||||||||||||| |||||  ||||| ||||||||||| |||| |||||| ||||||||| ||||||    
T  20022234 gttttcaatttccaatgcattgattgtacaaactttcataaaaaattactatttaaggtccttaaccagtgcc 20022306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 49446667 - 49446583
Alignment:
Q  58 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||| ||||||  |||| |||||| ||||| |||||||||| |||||||| | ||||||| |||||||| ||||||||||||||    
T  49446667 aaaaaagtcaaatatttcgatttccgatgcattgattacacatattttcatgataagttactatttaaaggccttaactagtgcc 49446583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 21241120 - 21241191
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 90  Q
    |||| ||||||| |||  ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||    
T  21241120 ggcactctttaaacatgttaaattaagaaatgattttttaaaaatatcaaaattttcaatttccaatgcact 21241191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 39767212 - 39767323
Alignment:
Q  31 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtc 129  Q
    |||| |||||| ||||||||||||||| |||||   |||||||| ||||||||||||| | |||||||||| ||| || ||||| |||| |||| | |||    
T  39767212 gcatgctaaataaagtaattattttttcaaaattaaaaagtttttaatttccaatgcattaattacacaaacttttataaaaaaattactatttgaggtc 39767311  T
Q  130 cttaactagtgc 141  Q
    |||||| |||||    
T  39767312 cttaaccagtgc 39767323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 44570185 - 44570122
Alignment:
Q  51 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 114  Q
    ||||||||||||||| ||| |||| ||||| ||||||| |||||||||||| ||||||||||||    
T  44570185 attttttaaaaatgttaaattttttaattttcaatgcattgattacacaaactttcataaaaag 44570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 49623052 - 49622961
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtt 116  Q
    |||||||||  |||||||||||||||||   ||||||||||||| ||||||||||| |||  || | |||||||||||||||| ||||||||    
T  49623052 tttaagcattttaaattaagtaattattccataaaaatgtcaaaattttcaatttctaatatactttattacacaaattttcacaaaaagtt 49622961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 7996722 - 7996816
Alignment:
Q  36 ctaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||| ||||||||||||  ||||| | |||||||| |||||||||||     |||||||||| ||||||||||| |||  |||||||||||||||    
T  7996722 ctaaattaaataattattttttttaaaattttaaagtttttaatttccaatg-----attacacaaactttcataaaaaattattatttaaagtccttaa 7996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 19597256 - 19597165
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    ||||||||| ||| |||| | ||||||| |||||||||||||||   ||||||||| |||||| ||| |||| ||||||| |||||| ||||    
T  19597256 tttaagcattctacattaggaaattattctttaaaaatgtcaaatagttcaatttctaatgcattgaatacataaatttttataaaatgtta 19597165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 36721660 - 36721589
Alignment:
Q  58 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 129  Q
    ||||| ||||||  ||||||||  ||||||| ||||||||||||||| |||||||| |||| ||||||||||    
T  36721660 aaaaaagtcaaatatttcaattctcaatgcattgattacacaaatttccataaaaacttactatttaaagtc 36721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 12618802 - 12618713
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||||||| | ||||| || ||||||||||| |||| |||||| ||| | |||||| |||||| |||||| |||||||||||||||||    
T  12618802 tctttaagcattccaaatttagaaattatttttttaaaaagtcaaatgttataaatttc-aatgcattgattatacaaattttcataaaaa 12618713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 49421969 - 49421884
Alignment:
Q  58 aaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||||| ||||||||||||||||||||||| | |||  ||||  ||| |||||  |||  ||||||||||||||||||||||||    
T  49421969 aaaaatgttaaagttttcaatttccaatgcactttattgtacaagcttttataaatcgttgtcatttaaagtccttaactagtgcc 49421884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 20390018 - 20390138
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||||| || | |||  ||| ||| ||||| |||||| ||||||  |||  |||| | ||||| |||| |||||| ||||||| | |||||||    
T  20390018 ggcattctttaagaattccaaaacaagaaataattttataaaaaagtcaaatattttgattttcgatgcattgatcacacaacttttcatgataagttac 20390117  T
Q  119 catttaaagtccttaactagt 139  Q
    ||||||||  |||||||||||    
T  20390118 catttaaaagccttaactagt 20390138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 23016335 - 23016231
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||| ||||| | |||||||| ||||||| |||||| | ||||||  ||||||||||||||||| ||| |||| | | ||| ||||||| |||     
T  23016335 ggcactctttgagcattccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattgaatacatagacttttataaaaacttaa 23016236  T
Q  119 cattt 123  Q
    |||||    
T  23016235 cattt 23016231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 23614626 - 23614729
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||| ||||||||||||||||| || |||| ||||||||| |||| ||| | |||||| ||| ||| ||||||  ||| | ||||||||| ||||    
T  23614626 ctaaattaaataattattttttaaaaacgttaaag-tttcaattttcaatacactttattacataaacttttataaaatattatcgtttaaagtctttaa 23614724  T
Q  135 ctagt 139  Q
    |||||    
T  23614725 ctagt 23614729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 25115371 - 25115267
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || | ||||| |||||||||| ||| |||| || ||   || |||||||||||||| ||| ||||||| |||| ||||||| |||| ||||    
T  25115371 tctttaagaatccaaaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaatacacaactttttataaaaacttactattt 25115272  T
Q  124 aaagt 128  Q
    |||||    
T  25115271 aaagt 25115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 39724175 - 39724064
Alignment:
Q  26 tttaagcatactaaattaagtaattatttt--ttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    |||||| || ||||||||||||| ||| ||  ||| ||||||||||||||||||||| ||||  || | |||| ||||| ||| ||||||  ||||||||    
T  39724175 tttaagtattctaaattaagtaaatatattagttagaaatgtcaaagttttcaatttacaatatactttattatacaaacttttataaaatattaccatt 39724076  T
Q  123 taaagtccttaa 134  Q
    |||||| |||||    
T  39724075 taaagttcttaa 39724064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 44690376 - 44690284
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    |||| ||||||| ||||||||| ||||||||||| ||||||||| || |||  |||| |||| ||||| | | |||||| | |||||||||||    
T  44690376 ggcactctttaaacatactaaaataagtaattatcttttaaaaaagttaaatatttcgattttcaatgtaataattacatatattttcataaa 44690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 14949069 - 14949006
Alignment:
Q  50 tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||| |||||||| ||||||  || ||| || ||||||| ||||||||||||||||||||||||    
T  14949069 tattctttaaaaaagtcaaatgttacaaatttcaatgcattgattacacaaattttcataaaaa 14949006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 24369405 - 24369476
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 95  Q
    ||||||| ||||||||| |||  ||||||| |||| ||| ||||||  ||||||||||||| ||||||||||    
T  24369405 tctttaaacatactaaaataaacaattattctttataaaagtcaaacatttcaatttccaaagcactgatta 24369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 37179689 - 37179760
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 95  Q
    ||||||||||||| |||  |||||||||||||||| ||| ||||||  |||| |||||||||| | ||||||    
T  37179689 tctttaagcataccaaaacaagtaattattttttagaaaagtcaaacatttcgatttccaatgtattgatta 37179760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 48097952 - 48098051
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    |||||| || |||||||||| ||||||| |||||||| || |||   ||||||||||||| || | | ||||||  |||| |||||||||||| ||||||    
T  48097952 tttaagtattctaaattaagaaattattctttaaaaaagttaaatagttcaatttccaatacattaaatacacatgtttttataaaaagttactatttaa 48098051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 1696248 - 1696194
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    ||||||||||| ||||| |||||||| | ||||||| |||||||||| |||||||    
T  1696248 tttcaatttccgatgcattgattacatacattttcaaaaaaagttactatttaaa 1696194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 24546816 - 24546722
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||||||||||  ||||||| | ||||||| ||||||||  ||||    |||||||||||||| | | | |||||||||||||||||||| ||||    
T  24546816 tctttaagcatgttaaattaggaaattattctttaaaaaattcaagcagttcaatttccaatgtattaaatacacaaattttcataaaaaattac 24546722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 40173586 - 40173524
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 86  Q
    ||||||| ||| |||||||||||||| |||  |||||||||| |||||||| ||||| |||||    
T  40173586 tctttaaacattctaaattaagtaatcattcattaaaaatgttaaagtttttaattttcaatg 40173524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 41468142 - 41468200
Alignment:
Q  84 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||| ||||||||   ||||| || |||||||||||||||||| ||||||||||||||    
T  41468142 atgcattgattacatgtatttttatgaaaagttaccatttaaaggccttaactagtgcc 41468200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 41956490 - 41956428
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||| ||| ||| ||||||||||| |||||||||||| |||| ||| |||| ||||||    
T  41956490 tttcaattttcaacgcattgattacacaatttttcataaaaatttactattaaaagcccttaa 41956428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 50115068 - 50115145
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    ||||||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||| | ||||   ||||||||||||||    
T  50115068 aattattttataaaaaagtcaaagatttcgatttcctatgcattgattacacatattatgataa---gttaccatttaaag 50115145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 38949118 - 38949057
Alignment:
Q  73 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||||| ||||| ||| | ||||| |||||||||||| |||| |||| ||||||||||    
T  38949118 ttcaatttccgatgcattgaatgcacaatttttcataaaaatttactatttcaagtccttaa 38949057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 41394078 - 41394013
Alignment:
Q  37 taaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 101  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| |||||  | ||||||||||    
T  41394078 taaattaagtaattattatttaaaaaaagttaaagttttcaatttctaatgcgttaattacacaaa 41394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 51105943 - 51106020
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 124  Q
    ||||||| |||||||| ||||||  ||| ||||| |||| ||| |||||| || ||||||||||| |||||| |||||    
T  51105943 aattattatttaaaaaagtcaaatattttaattttcaatacacggattacgcatattttcataaatagttactattta 51106020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 51834912 - 51835017
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatt 122  Q
    ||||||||||| ||||||| || ||||||| ||| |||| |||||   ||  ||||||||||||| | | ||||||| |||||| |||||| |||| |||    
T  51834912 tctttaagcatcctaaatttagcaattattcttttaaaaagtcaactattataatttccaatgcattaaatacacaacttttcattaaaaatttactatt 51835011  T
Q  123 taaagt 128  Q
    ||||||    
T  51835012 taaagt 51835017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 2818357 - 2818421
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca 88  Q
    |||||||||||  ||||||||| ||||||| ||| |||| ||||||   ||||||||||||||||    
T  2818357 tctttaagcattttaaattaagaaattattcttttaaaaggtcaaaaagttcaatttccaatgca 2818421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 21240662 - 21240706
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaat 63  Q
    |||||||||||| ||| |||||||||| ||||||| |||||||||    
T  21240662 ggcattctttaaacatgctaaattaagaaattattatttaaaaat 21240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 24753978 - 24754030
Alignment:
Q  76 aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 128  Q
    ||||||||||||| ||||| || ||| ||||||||||| |||| |||||||||    
T  24753978 aatttccaatgcattgatttcataaactttcataaaaatttactatttaaagt 24754030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 27748438 - 27748526
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 112  Q
    ||||||| ||| ||||| |||||||||||||||||||| | |  || |||||||||| ||||  |  |||||||| || ||||||||||    
T  27748438 tctttaaacattctaaactaagtaattattttttaaaagtatttaacttttcaattttcaatatatcgattacactaactttcataaaa 27748526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 32055454 - 32055338
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||| ||||||||||||| |||  ||| ||||||| |||| ||| ||||||  ||||| |||||||||||| ||||||||   ||||| ||||| | ||     
T  32055454 ggcactctttaagcatacaaaaacaagcaattattctttagaaaagtcaaacattttcgatttccaatgcattgattacatgtatttttataaatacttg 32055355  T
Q  118 ccatttaaagtccttaa 134  Q
    | ||||| |||||||||    
T  32055354 ctatttatagtccttaa 32055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 42901983 - 42902027
Alignment:
Q  74 tcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||| |||  |||||||||| |||||||||||||||||    
T  42901983 tcaatttccaaagcatagattacacaacttttcataaaaagttac 42902027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 42957080 - 42956992
Alignment:
Q  24 tctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    ||||||| ||| ||||| |||| | ||||| |||||||||  |||||  ||||||||||||||||| | |||||||| ||||| |||||    
T  42957080 tctttaaacattctaaaataagcagttattattttaaaaaaatcaaatatttcaatttccaatgcattaattacacacatttttataaa 42956992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 48551038 - 48551156
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| ||||    
T  48551038 tctttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatgcaccgattacacaattttttataaaaagttactattt 48551137  T
Q  124 aaagtccttaactagtgcc 142  Q
     | ||||||||||||||||    
T  48551138 gaggtccttaactagtgcc 48551156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 14146110 - 14146208
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  14146110 ctaaattaagtaattattttttttaaatgtcaaagttttcaatttctaatgcactgattacacaaacttctataaaaatttaccatttaaagtccttaa 14146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 3027093 - 3026979
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||||||| ||||||||||||||| || ||||||||| |||||| ||||| |||||||||||| | | |||||||| |||||||||||||||| |||    
T  3027093 tctttaagcattctaaattaagtaatttttatttaaaaatatcaaaggtttcattttccaatgcacttcactacacaaactttcataaaaagttactatt 3026994  T
Q  123 taaagtccttaacta 137  Q
    |||||||||||||||    
T  3026993 taaagtccttaacta 3026979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 12140133 - 12140255
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa-ttttcataaaa 112  Q
    ||||||| ||| ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  12140133 cctgtggtattatttaagcatgctaaattaaataattattcttttaaaatgtcaaagttttcaatttccaatgtactgattatacaaactttttataaaa 12140232  T
Q  113 agttaccatttaaagtccttaac 135  Q
    |||||| |||||| ||| |||||    
T  12140233 agttactatttaaggtctttaac 12140255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 45757927 - 45758037
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||||||  ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  ||  ||||    
T  45757927 tctttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcactgattacacaaactttcataaaaaaatattattt 45758026  T
Q  124 aaagtccttaa 134  Q
    || ||||||||    
T  45758027 aaggtccttaa 45758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 20821303 - 20821412
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 124  Q
    ||||| ||| ||||| |||||||||||| ||||||||| | |||| ||| |||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  20821303 tttaaacattctaaactaagtaattattctttaaaaatattaaaggttttaatttccaatgcactttattacacaaactttcataaaaagttaccattta 20821402  T
Q  125 aagtccttaa 134  Q
    ||||||||||    
T  20821403 aagtccttaa 20821412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 24313544 - 24313661
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagtta 117  Q
    |||| ||||||| ||| |||||||||  ||||||| |||||||||||||||||||||||||| |||||||  | | ||||||||||||||||||||||||    
T  24313544 ggcactctttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcattttactacacaaattttcataaaaagtta 24313643  T
Q  118 ccatttaaagtccttaac 135  Q
     ||||||||||| |||||    
T  24313644 tcatttaaagtctttaac 24313661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 25317803 - 25317921
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||| |||||| |||||| ||||||||||| ||| ||||| | ||||||||||||||||||||||  ||||||||||| ||| ||||||| |||| ||||    
T  25317803 tcttcaagcatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgcatcgattacacaaacttttataaaaatttactattt 25317902  T
Q  124 aaagtccttaactagtgcc 142  Q
    || ||||||||| ||||||    
T  25317903 aaggtccttaaccagtgcc 25317921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 46725655 - 46725773
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| ||| |||||||||| |||||||| | |||||||||||||| | ||||||||   |||    
T  46725655 tctttaagcattctaaattaagtagttattttataaaaatgttaaaattttcaattttcaatgcactttattacacaaattttta-aaaaagttgttatt 46725753  T
Q  123 taaagtccttaactagtgcc 142  Q
    ||||||| ||||||||||||    
T  46725754 taaagtcgttaactagtgcc 46725773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 33072181 - 33072108
Alignment:
Q  62 atgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| | |||||||||    
T  33072181 atgtcaaagttttcaatttccaatgcattaattacacaaatttttataaaaaattaccatttcaggtccttaac 33072108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 29612018 - 29612106
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 111  Q
    ||||||| ||| ||||| |||||||||||| ||||||||||| | ||||||||||||||||||||| | |||||||||| |||||||||    
T  29612018 tctttaaacattctaaaataagtaattattctttaaaaatgtgacagttttcaatttccaatgcactttattacacaaactttcataaa 29612106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 37388418 - 37388494
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||||||||||||| ||||||||||| ||| |||||| ||| ||||||| |||||||||||||||| |||||||    
T  37388418 taaattaagtaattattctttaaaaatgtgaaatttttcagttttcaatgcattgattacacaaatttttataaaaa 37388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 54911194 - 54911293
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||| ||| ||||||||| |||||||| ||| ||||||| |||||||| ||||| |||| || |||||||| ||| ||||||||||||||||    
T  54911194 ggcaatctttaaacattctaaattaaataattattcttttaaaatgttaaagttttaaattttcaatacattgattacataaactttcataaaaagttac 54911293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 1511367 - 1511436
Alignment:
Q  58 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    ||||||||||||| ||||||||||||||||| ||||||||  |||||||| ||||||||||| |||||||    
T  1511367 aaaaatgtcaaagatttcaatttccaatgcattgattacattaattttcaaaaaaagttaccttttaaag 1511436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 40614356 - 40614263
Alignment:
Q  42 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||| | |||||||||| |||| | |||| ||| |||||||||| ||||||    
T  40614356 taagtaattattctttaaaaatgtcaatgttttcaattttcaatgcactttattacacaaactttcttgaaaattta-catttaaagttcttaac 40614263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 28692032 - 28691955
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 101  Q
    ||||||| |||| ||||||||||||||||| ||| ||||||| ||||||||||||||| ||| || | ||||||||||    
T  28692032 tctttaaacatattaaattaagtaattattcttttaaaatgttaaagttttcaatttctaatacaataattacacaaa 28691955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 49168725 - 49168849
Alignment:
Q  10 agaacctgtggcattctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat 108  Q
    |||| ||||| |||||||||| ||| ||||||| | |||||||| ||||||||||| | || ||||||||||| || | | |||||||||||| ||||||    
T  49168725 agaagctgtgacattctttaaacatgctaaatttactaattattcttttaaaaatggctaaattttcaatttctaaagtattgattacacaaactttcat 49168824  T
Q  109 aaaaagttaccatttaaagtccttaa 134  Q
    ||||| ||  ||||||| ||||||||    
T  49168825 aaaaa-ttttcatttaaggtccttaa 49168849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 22772858 - 22772970
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||| ||| | ||||||||||||||||   ||| ||| ||||||||||||||||||||||| | | |||  ||||| ||||| |||||||||  |||    
T  22772858 tctttaaacattccaaattaagtaattattccataacaatttcaaagttttcaatttccaatgcaatttattctacaaactttcacaaaaagttaatatt 22772957  T
Q  123 taaagtccttaac 135  Q
    |||||||||||||    
T  22772958 taaagtccttaac 22772970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 1829330 - 1829243
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||||||||||| |||||   || ||||| ||||| ||||| |||||||||||||  ||||||||||||||| || |||||||    
T  1829330 aattattttttaaaaatatcaaatagtttaattttcaatgtactgaatacacaaattttcgcaaaaagttaccattttaaatccttaa 1829243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 53040467 - 53040558
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagt 115  Q
    |||||||| || |||||||||| ||||||| ||||||||  |||||   |||||||||||||| | ||| |||||||| |||||||||||||    
T  53040467 tctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattgaatacacaaactttcataaaaagt 53040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 18399239 - 18399149
Alignment:
Q  52 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||| |||||| ||||||  |||| |||||| ||||| ||||||||||| ||||||| | |||||||||||||||  ||||||||| ||||    
T  18399239 ttttataaaaaagtcaaatatttcgatttccgatgcattgattacacaacttttcatgataagttaccatttaaaagccttaactaatgcc 18399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 9342757 - 9342672
Alignment:
Q  28 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaa 112  Q
    ||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||| |||||||  | |||||||||||||| ||||||    
T  9342757 taagcattctagattaaataattattcattaaaaatgttaaagttttcaattttcaatgcattttattacacaaatttttataaaa 9342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 48322314 - 48322241
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 97  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||  |||| ||||||||| || ||||||||    
T  48322314 tctttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacattgattaca 48322241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 50644132 - 50644189
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttc 81  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||| |||| ||||||    
T  50644132 tctttaagtatattaaattaagtagttattttttaaaaatgtcaaattttttaatttc 50644189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 45584432 - 45584343
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||||||||  ||||||||||||||||| ||| ||||| |  ||||||| ||||| ||||  | |||||||||||| |||||||||||||||    
T  45584432 tttaagcatgttaaattaagtaattattcttttaaaatat--aagtttttaattttcaatatattgattacacaaactttcataaaaagtta 45584343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 25548258 - 25548203
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    |||||||||| |||||| |||||||||| ||||||||||||| ||| |||||||||    
T  25548258 tttcaatttctaatgcattgattacacatattttcataaaaatttatcatttaaag 25548203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 39651994 - 39652033
Alignment:
Q  103 tttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  39651994 tttcataaaaagttaccatttaaagtccttaactaatgcc 39652033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 37708430 - 37708508
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 97  Q
    |||| |||||||||||| |||| |||| ||||| | |||||||| || |||  ||||||||| ||||||||||||||||    
T  37708430 ggcactctttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgcactgattaca 37708508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 38009026 - 38009128
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||| ||||||||||| ||||||| || |||||||  |||| || ||||||  |||||||||| ||||| | | || ||||||||||||||||||| |||    
T  38009026 ggcactctttaagcattctaaattgagaaattattccttaagaaagtcaaacattttcaattttcaatggattaatcacacaaattttcataaaaactta 38009125  T
Q  118 cca 120  Q
    |||    
T  38009126 cca 38009128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 52340188 - 52340118
Alignment:
Q  65 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||    
T  52340188 tcaaagatttcgatttccgatgcattgattacacatatttttatgataagttaccatttaaaggccttaac 52340118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 2831545 - 2831634
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||||||| || | |||| ||| ||||||||||||| || ||||||  |||||||||  |||||| |||||| |||| ||||||||||||    
T  2831545 tctttaaggattccaaatcaagaaattattttttaataaagtcaaatatttcaattttaaatgcaatgattatacaagttttcataaaaa 2831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 37359467 - 37359570
Alignment:
Q  27 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaa--ttttcataaaaagttaccattt 123  Q
    ||||||||  |||||||||||||||||   ||||||||| |||||||||||||| |||| ||| | ||||||||||  || ||| ||||| |||||||||    
T  37359467 ttaagcattttaaattaagtaattattccataaaaatgttaaagttttcaattttcaattcactttattacacaaactttatca-aaaaaattaccattt 37359565  T
Q  124 aaagt 128  Q
    |||||    
T  37359566 aaagt 37359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 40546345 - 40546398
Alignment:
Q  44 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 97  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||| ||||||||    
T  40546345 agtaattattttttaaaaaagtcaaatatttcgatttccaatgcattgattaca 40546398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 19898187 - 19898107
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    ||||||||| || |||  |||||  ||||||||| ||||||| |||||||||| ||||||||||||| |||| || |||||    
T  19898187 aattattttatataaaaatcaaatatttcaattttcaatgcattgattacacatattttcataaaaatttacaatgtaaag 19898107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 25062034 - 25061987
Alignment:
Q  48 attattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 95  Q
    |||||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  25062034 attattctttaaaaatgttaaaattttcaattttcaatgcactgatta 25061987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 48811479 - 48811372
Alignment:
Q  21 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacca 120  Q
    ||||||||||| || ||||||| || || ||||  ||||||| ||| ||  || ||| || ||||||| ||||||||||| |||||||||||| |||| |    
T  48811479 cattctttaaggatcctaaatttagaaaatattcattaaaaaagtctaatgttacaaatttcaatgcattgattacacaatttttcataaaaacttacta 48811380  T
Q  121 tttaaagt 128  Q
    || |||||    
T  48811379 ttaaaagt 48811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 54290890 - 54290795
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 114  Q
    |||| |||||||||||  ||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||    
T  54290890 ggcactctttaagcatgataaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaagttttcataaaaag 54290795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 12908930 - 12908860
Alignment:
Q  20 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 90  Q
    ||||| ||||| |||  ||||| ||||||||||||||||||||  ||||| ||||||||||  ||||||||    
T  12908930 gcattgtttaaacattttaaataaagtaattattttttaaaaaaatcaaaattttcaatttttaatgcact 12908860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 23554781 - 23554672
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || || ||| ||| |||||||||||||||| |||||||||| | |||||||||||| | | ||||| || | ||||||||  || ||||||    
T  23554781 tctttaaggattcttaataaagaaattattttttaaaaa-gtcaaagtttacgatttccaatgcaataaatacacgaactatcataaaatctttccattt 23554683  T
Q  124 aaagtccttaa 134  Q
     |||| |||||    
T  23554682 taagttcttaa 23554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 54912058 - 54911988
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||||||||  ||||| |||||||||| |||||||| | |||||  |||||| || ||||||||||||||    
T  54912058 tttcaatttcggatgcattgattacacatattttcatgataagttgtcatttataggccttaactagtgcc 54911988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 27968262 - 27968307
Alignment:
Q  90 tgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||||| |||||||| | |||||||||||||||| |||||||    
T  27968262 tgattacacatattttcatgataagttaccatttaaaggccttaac 27968307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 41750832 - 41750755
Alignment:
Q  52 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 129  Q
    |||||||| ||||||||| |||| ||||| ||||||| |||||| || || ||| || | || |||||||||||||||    
T  41750832 ttttttaataatgtcaaactttttaatttacaatgcattgattatactaagttttatcacaacttaccatttaaagtc 41750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 43803992 - 43804061
Alignment:
Q  49 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  43803992 ttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaagttac 43804061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 4305260 - 4305156
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||| |||| |||||||| |||||||||| || |  ||||||||||||| ||||||  ||  || ||| |||| | ||||||||| | ||||||||||||    
T  4305260 cctggggcactctttaaggatactaaatttagaatatattttttaaaaaagtcaaatattataaattctaatgtattgattacacgatttttcataaaaa 4305161  T
Q  114 gttac 118  Q
     ||||    
T  4305160 cttac 4305156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 40690235 - 40690287
Alignment:
Q  73 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    |||||||| |||| || ||| ||||||| ||||||||||||| ||||||||||    
T  40690235 ttcaattttcaatacattgaatacacaagttttcataaaaagctaccatttaa 40690287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 46547858 - 46547794
Alignment:
Q  54 ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||| ||||||   |||||||||||||||| ||| |||| || |||||||||||| ||||    
T  46547858 ttttaaaaaagtcaaataattcaatttccaatgcattgaatacataatttttcataaaaaattac 46547794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 46712009 - 46711949
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 97  Q
    |||| |||||||||||| |||||||| ||||||  |||  |||||||||||| ||||||||    
T  46712009 taaaataagtaattattctttaaaaaagtcaaacattttgatttccaatgcattgattaca 46711949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 53766777 - 53766702
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||||||||||| || ||||  |||||||| ||||||| | | |||||||| ||||||||||  |||||||||    
T  53766777 aattattttttaaaaaagtaaaag-cttcaattttcaatgcaataaatacacaaactttcataaaatattaccattt 53766702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 29716871 - 29716754
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 124  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||    
T  29716871 tttaagcattctaaattcagcaattatttttttaaaatgtcaaagttttcaatttccaatgcactttattacacaaactttcataaaaggttaccattta 29716772  T
Q  125 aagtccttaactagtgcc 142  Q
    ||||||||||| ||||||    
T  29716771 aagtccttaaccagtgcc 29716754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 10364754 - 10364854
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 136  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||| |||| |||||| ||||||||||    
T  10364754 taaattaagtaattattctttaaaaatatcaaagttttcaatttacaatgcactgattatacgaactttcataaaaatttactatttaaggtccttaact 10364853  T
Q  137 a 137  Q
    |    
T  10364854 a 10364854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 23344569 - 23344688
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 122  Q
    ||||||||| | ||||||||||||||  || |||| |||||||||||| ||||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  23344569 tctttaagctttctaaattaagtaatatttctttacaaatgtcaaagtgttcaatttccaatgcactttattacacaaacttttataaaaagttaccatt 23344668  T
Q  123 taaagtccttaactagtgcc 142  Q
    |||||| | |||| ||||||    
T  23344669 taaagtgcataaccagtgcc 23344688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 13445839 - 13445745
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||||| || ||||| || ||||||| ||||||||||| ||||    
T  13445839 tctttaagcatgctaaattaagtaagtattctttaaaaatgtgaaagttttcaatttcaaaagcactaatcacacaaactttcataaaaaattac 13445745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 5704665 - 5704549
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatt 122  Q
    ||||||| ||| |||||||||||||||||||||| |||||||   |||||||||||| ||||| | |||||||| ||| |||||| ||||| |||  |||    
T  5704665 tctttaaacatgctaaattaagtaattatttttttaaaatgt--tagttttcaattttcaatgtattgattacataaactttcataaaaaaattattatt 5704568  T
Q  123 taaagtccttaactagtgc 141  Q
    ||||||| ||||| |||||    
T  5704567 taaagtctttaacaagtgc 5704549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 27752644 - 27752759
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaa-tttccaatgcac-tgattacacaaatttt---cataaaaagttac 118  Q
    ||||||| ||| |||||||||||||||||||| || |||||||||||||||||| |||| ||||||| | |||||||||| |||    | |||||||||     
T  27752644 tctttaaacattctaaattaagtaattattttatacaaatgtcaaagttttcaattttctaatgcactttattacacaaactttaaaaaaaaaaagttat 27752743  T
Q  119 catttaaagtccttaa 134  Q
     |||||||||||||||    
T  27752744 tatttaaagtccttaa 27752759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 34552407 - 34552312
Alignment:
Q  48 attattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcat-aaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||| ||||||||| | ||||||||||||||||||||||| | ||||||| || |||||| ||||||||  ||||||||||||||||| ||||||    
T  34552407 attattctttaaaaatattaaagttttcaatttccaatgcactttattacac-aactttcataaaaaagttgtcatttaaagtccttaacgagtgcc 34552312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 6586535 - 6586424
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||| |||| |||||||||||||||||||| | ||||| | ||| |||| |||| |   |||||||||| ||||| |||  ||| |||||||||||||||    
T  6586535 cctggggcactctttaagcatactaaattaggaaattaatctttgaaaaagtcagatagttcaatttccgatgcattgaaaacataaattttcataaaaa 6586436  T
Q  114 gttaccatttaa 125  Q
    ||||| ||||||    
T  6586435 gttactatttaa 6586424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 21130707 - 21130813
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttc-aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||| ||| |||||||||| ||||||||||| ||||  ||||| |||| |||| ||| ||| || ||||||||||  |||| |||||| |||||||||    
T  21130707 taaatttagttattatttttttaaaatgtcaaacttttttaattttcaatacactaattgcaccaactttcataaaagtttactatttaaggtccttaac 21130806  T
Q  136 tagtgcc 142  Q
    |||||||    
T  21130807 tagtgcc 21130813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 10429739 - 10429843
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 136  Q
    ||||| ||||||||||||||||||| |||  || |||||||||| || |||| |||||||| ||| ||||||||||| |||| || |||   ||||||||    
T  10429739 taaatcaagtaattattttttaaaa-tgtttaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatagccttaact 10429837  T
Q  137 agtgcc 142  Q
    ||||||    
T  10429838 agtgcc 10429843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 34552610 - 34552494
Alignment:
Q  25 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||  || ||| |||||||||| ||||||||| | |||||||| ||||| ||||| |||  | ||||||| ||| ||||||||||| ||||||    
T  34552610 ctttaagcattttacatttagtaattattctttaaaaatattaaagtttttaattttcaatgtactttaatacacaacttt-cataaaaagttgccattt 34552512  T
Q  124 aaagtccttaactagtgc 141  Q
    ||||| |||||| |||||    
T  34552511 aaagttcttaacaagtgc 34552494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 34552265 - 34552167
Alignment:
Q  44 agtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||||||| ||||||||| | |||||||||||||| |||||||  | ||||||  || |||||| |||| ||| ||||||||||||||||| ||||||    
T  34552265 agtaattattctttaaaaatattaaagttttcaattttcaatgcattttattaca-taactttcattaaaaattatcatttaaagtccttaaccagtgcc 34552167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 3753213 - 3753103
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaa 112  Q
    |||||| || |||||||||||  ||||| ||||||||||| ||| ||||| | |||||||||||||| |||| | | || ||||||||| ||| ||||||    
T  3753213 cctgtgccactctttaagcatgataaataaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatggttacacaaacttttataaaa 3753114  T
Q  113 agttaccattt 123  Q
     ||||| ||||    
T  3753113 tgttactattt 3753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 3769436 - 3769326
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaa 112  Q
    |||||| || |||||||||||  ||| | ||||||||||| ||| ||||| | |||||||||||||| |||| | | |||||||||||| ||| ||||||    
T  3769436 cctgtgccactctttaagcatgataattaaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatgattacacaaacttttataaaa 3769337  T
Q  113 agttaccattt 123  Q
     ||||| ||||    
T  3769336 tgttactattt 3769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 1479149 - 1479090
Alignment:
Q  75 caatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||| ||||||| ||| ||||||| ||| |||||||| |||||||||||||| |||||    
T  1479149 caattttcaatgcattgaatacacaattttacataaaaatttaccatttaaagtgcttaa 1479090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 26187557 - 26187510
Alignment:
Q  21 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaa 68  Q
    |||| ||||||||| |||||||||||||||| ||||||||||| ||||    
T  26187557 cattttttaagcattctaaattaagtaattaatttttaaaaatttcaa 26187510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 27778752 - 27778862
Alignment:
Q  24 tctttaagcatactaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 122  Q
    |||||||| || ||||||| ||||||||||||||  |||| ||||| | ||  ||||| ||||||| | | ||||||  |||||||||||| ||||||||    
T  27778752 tctttaagaatcctaaatttagtaattattttttttaaaaagtcaacgattataattttcaatgcattcaatacacat-ttttcataaaaatttaccatt 27778850  T
Q  123 taaagtccttaa 134  Q
    |||||| |||||    
T  27778851 taaagtgcttaa 27778862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 6546804 - 6546738
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||||| || ||| || ||| ||||||||||| |||||| ||||| |||| |||||||||||||    
T  6546804 aattattttatacaaaagttaaatttttcaatttctaatgcattgattgcacatattttcataaaaa 6546738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 7465508 - 7465578
Alignment:
Q  57 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    |||||| ||||||  ||||||||||| ||||| |||||||| ||||||||| ||| ||||| ||| |||||    
T  7465508 taaaaaagtcaaatatttcaatttccgatgcattgattacataaattttcaaaaagagttatcatataaag 7465578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 26187494 - 26187452
Alignment:
Q  92 attacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||    
T  26187494 attacacaaactttcataaaaaattaacatttaaagtccttaa 26187452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 30509314 - 30509424
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||||| ||| |||| ||||||| ||||||||  |||||  |||| |||| ||||||| ||||||||   ||||| ||||| | || | ||||    
T  30509314 tctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgattacatgtatttttataaatacttgctattt 30509413  T
Q  124 aaagtccttaa 134  Q
    | |||||||||    
T  30509414 atagtccttaa 30509424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 31702825 - 31702747
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||||||| |||||| || ||   ||| |||||| |||||| |||||||||| ||||| |||||||||||| ||||||    
T  31702825 aattattttataaaaaagttaagtattttaatttctaatgcattgattacacatatttttataaaaagttactatttaa 31702747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 354685 - 354576
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||||||| |||||||| | || |||| ||| ||||  | |||||||  || ||| ||||||||||||||| | | ||| |||||||||||| ||||||    
T  354685 tttaagcattctaaattatgaaagtattcttttaaaacttaaaagtttctaacttctaatgcactgattacaaagacttttataaaaagttactatttaa 354586  T
Q  126 agtccttaac 135  Q
     | |||||||    
T  354585 ggcccttaac 354576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 22695542 - 22695473
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatttaaagtccttaactagtg 140  Q
    ||||||||| | ||||| |||||||||| ||||| | |||||||||||||||||||  ||||||| ||||    
T  22695542 tttcaattttcgatgcattgattacacatatttttaataaaaagttaccatttaaaagccttaacgagtg 22695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 2692538 - 2692434
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || | ||||| |||||||||| ||| |||| |||||   || |||||||||||| | ||| ||||||| |||| || |||| |||| ||||    
T  2692538 tctttaagaatccaaaatttagtaattattattttaaaaagtcaactattacaatttccaatgaagtgaatacacaactttttattaaaatttactattt 2692439  T
Q  124 aaagt 128  Q
    |||||    
T  2692438 aaagt 2692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 12132520 - 12132620
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| |||| |||||| ||| |||| | || |||| |||||||| ||||||   |||||||| ||||||| | | |||||||||||||||| ||| ||||    
T  12132520 ggcactcttgaagcattctatattatgaaaatattctttaaaaacgtcaaataattcaattttcaatgcatttaatacacaaattttcatagaaacttac 12132619  T
Q  119 c 119  Q
    |    
T  12132620 c 12132620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 12848585 - 12848467
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| |||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||      
T  12848585 ggcactctttaagcatattaaattaagtaactattctttaataatgtcaaagttttcaatttccattgcactaattacacaaactttcataaaaagttgt 12848486  T
Q  119 catttaaagtccttaacta 137  Q
    ||||||| |||||||||||    
T  12848485 catttaaggtccttaacta 12848467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 24389736 - 24389632
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  24389736 ggcactctttaagcatgctaaattaagtaattattcttttaagatgtcaaagttttcaatttccaatgcgctgattacacaaactttcataagaagttac 24389637  T
Q  119 cattt 123  Q
    |||||    
T  24389636 cattt 24389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 33068639 - 33068540
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||  ||||  |||||||||    
T  33068639 ctaaattaagtaattattttttaaaaatgtgaaagttttcaatttctaatgcactgattatacaaactttcataaaaagttactttttatggtccttaac 33068540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 33454966 - 33455067
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||||||| || |||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||| ||||    
T  33454966 tctttaagcatgctaaattaagaaactattctttaaaaatgtcaaagttttcaatttacaatacattgattacacaacttttcataaaaagttactattt 33455065  T
Q  124 aa 125  Q
    ||    
T  33455066 aa 33455067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 431726 - 431630
Alignment:
Q  40 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||| |||||    
T  431726 attaagtaattattctttaaaaatgttaaaattttcaatttccaatgcacttttttacacaaactttcataaaaagttaccatttaaagtctttaac 431630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 6084010 - 6083911
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| |||||  ||||||||||||| ||| ||||||||||| |||||    
T  6084010 tctttaagcatactaaatttagtaattattattttaaaatatcaaagttttcaattttcaatgtgctgattacacaaacttttataaaaagttatcattt 6083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 6334780 - 6334678
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||  |||||||||| |||||    
T  6334780 tctttaaacatgctaaattaaaaaattattttttaaaaatgtcaaagttttcaatttccaatgcattgattatataaacttttgtaaaaagttatcattt 6334681  T
Q  124 aaa 126  Q
    |||    
T  6334680 aaa 6334678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 12205530 - 12205620
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||||||||||||||||||| |||| ||||||||||| |||| |||||||| | |||||||||||||||| ||||||||||||||||||    
T  12205530 taaattaagtaattattttttataaatatcaaagttttccatttgcaatgcacattattacacaaattttcaaaaaaagttaccatttaaa 12205620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 565802 - 565706
Alignment:
Q  24 tctttaagcatactaaattaagtaat--tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||| |||||||||||||   |||| ||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  565802 tctttaagcatgctaaattaagtaaaagtattctttaaaaatgtgaaagttttcaatttcctatgcactaattacacaaactttcataaaaagttac 565706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 8964392 - 8964477
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    ||||||||| |||||||||||||||||| |||||||| || |||  ||||||||||||||||| ||||||||||||||||||||||    
T  8964392 tttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaa 8964477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 30523014 - 30523111
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||| ||||| || ||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||| || |||||    
T  30523014 taaattaaataatttttctttaacaatgtcaaagttttcaatttccaatgtactaattacacaaactttcataaaaagttaccatctaaggtacttaa 30523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 42342581 - 42342487
Alignment:
Q  40 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    ||||| |||||||| ||||||||||||||| ||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  42342581 attaaataattattctttaaaaatgtcaaaattttcaatttt-aatacactgattaaacaaattttcataaaaagttaccatttaatatccttaac 42342487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 33634906 - 33634796
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| ||  |||||||| ||||||||  || ||||| | |||||||||||||||||||| ||||||| ||||| |||| |||||||||||| ||||    
T  33634906 tctttaaggatgttaaattaaataattattcgtttaaaatatgaaagttttcaatttccaatgtactgattgcacaactttttataaaaagttactattt 33634807  T
Q  124 aaagtccttaa 134  Q
    |||||||||||    
T  33634806 aaagtccttaa 33634796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 6411480 - 6411367
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    ||||| ||| |||||| ||||||||||| ||| ||||| | |||||||||||||||||||| |||||||||||| | ||| |||||||||||  ||||||    
T  6411480 tttaaacatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgtactgattacacatacttttataaaaagttattatttaa 6411381  T
Q  126 agtccttaactagt 139  Q
     || ||||||||||    
T  6411380 ggttcttaactagt 6411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 32066740 - 32066833
Alignment:
Q  44 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 137  Q
    ||||||||||||||  ||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||  |||||| |||||||||||    
T  32066740 agtaattattttttttaaatgtcaaagtttttaatttctaatgtactaattacacaaactttcataaaaagttataatttaaggtccttaacta 32066833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 9049256 - 9049148
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    |||||||||  ||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||| | |||||||||||||| |||||||||||  ||||||    
T  9049256 tttaagcatgttaaattaagtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaatttttataaaaagttattatttaa 9049157  T
Q  126 agtccttaa 134  Q
     || |||||    
T  9049156 ggttcttaa 9049148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 3074073 - 3074187
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||| |||||||||||  |||||||||||||||||  || ||||| |||||| ||||||||||||||||||||||||||   || ||| || ||||||||    
T  3074073 ggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagtta 3074169  T
Q  118 ccatttaaagtccttaac 135  Q
    |||||||||||| |||||    
T  3074170 ccatttaaagtctttaac 3074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 2826074 - 2825977
Alignment:
Q  14 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    ||||||| | ||||||||||||||||| |||| |||||||||||||||| || |||  |||| |||||||||||| |||||||||| ||||| |||||    
T  2826074 cctgtggtactctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattgattacacacatttttataaa 2825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 4655069 - 4654992
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 101  Q
    ||||||||||| ||||||||  |||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||    
T  4655069 tctttaagcatgctaaattagataattatttttttaaaatatcaaagttttcaattttcaatgcaccgattacacaaa 4654992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 9448450 - 9448570
Alignment:
Q  21 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgat-tacacaaattttcataaaaagttacc 119  Q
    ||||||| ||| || |||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||| |  || || ||||||||||  |||      
T  9448450 cattcttaaagtattctaaattaagtagttattttttaaaactgtcaaacttttcaattttcaatgcactgatgtgtactaactttcataaaagtttatt 9448549  T
Q  120 atttaaagtccttaactagtg 140  Q
    |||||| ||||||||||||||    
T  9448550 atttaaggtccttaactagtg 9448570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 21277551 - 21277666
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| ||  ||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||||  || ||| ||||||  |||||||||    
T  21277551 tctttaagtattttaaattaagtaattatttttttaaaatgtcaaacttttcaa-ttgcaatgcactgattacagtaacttttataaaagtttaccattt 21277649  T
Q  124 aaagtccttaactagtg 140  Q
    ||  |||||||| ||||    
T  21277650 aagatccttaaccagtg 21277666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 12762979 - 12762896
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 107  Q
    |||||||||||   |||||||||||||||| || |||||||| ||| ||||||||||||||||||||| ||||||||| |||||    
T  12762979 tctttaagcatttaaaattaagtaattattcttaaaaaatgttaaaattttcaatttccaatgcactgtttacacaaactttca 12762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 30822815 - 30822764
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30822815 taaattaagtaattattttttgaaaatgtcaaagttttcaatttccaatgca 30822764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 13538389 - 13538495
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||||||||||||   ||||||| ||||||||  |||||   |||||||||||||||| ||| |||| || |||||||||||||||||    
T  13538389 ggcactctttaagcatactaaattagaaaattattctttaaaaaattcaaataattcaatttccaatgcattgaatacataacttttcataaaaagttac 13538488  T
Q  119 catttaa 125  Q
     ||||||    
T  13538489 tatttaa 13538495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 29685812 - 29685694
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| ||| |||||| ||||||||||| ||| ||||| | |||||| ||||||| ||| |||| |||||||||||||||  ||||||||||  ||||    
T  29685812 tctttaaacatgctaaataaagtaattattctttcaaaatttaaaagttctcaattttcaacgcaccgattacacaaatttttgtaaaaagttattattt 29685713  T
Q  124 aaagtccttaactagtgcc 142  Q
     |  |||||||||||||||    
T  29685712 tagatccttaactagtgcc 29685694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 40874826 - 40874932
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    ||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||| ||  ||| || ||||||||||  |||| ||||||||||||||||    
T  40874826 taaattaagtaattattttttaaaaatgttaaactttttcaattttcaacgcactaatggcactaactttcataaaagtttactatttaaagtccttaac 40874925  T
Q  136 tagtgcc 142  Q
     ||||||    
T  40874926 cagtgcc 40874932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 30869673 - 30869589
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 105  Q
    |||| ||||||||||| ||||||||| |  ||||| ||||||||||| ||||||||||||||| ||| ||||||| |||||||||||    
T  30869673 ggcactctttaagcatgctaaattaaat--ttattctttaaaaatgttaaagttttcaatttctaatacactgataacacaaatttt 30869589  T

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Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 18043839 - 18043942
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||||||||| ||||| | ||||||| ||||| | |||||||| | ||| ||||||| | |||||||||| ||| |||||||||||| ||||    
T  18043839 tctttaaacatactaaataaagtact-atttttttaaaatttaaaagtttttagttttcaatgcattaattacacaaagttttataaaaagttactattt 18043937  T
Q  124 aaagt 128  Q
    |||||    
T  18043938 aaagt 18043942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 11385462 - 11385561
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||| ||||||||||| ||||||| | ||||| ||||| ||||||||| ||| | || ||||||| ||| ||||||||||| |||||||| |||||||    
T  11385462 ctaaatcaagtaattattctttaaaattatcaaatttttctatttccaatacactttataacacaaacttttataaaaagttatcatttaaaatccttaa 11385561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 28695684 - 28695605
Alignment:
Q  61 aatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagt 139  Q
    ||||||||||| |||||||||||||||| |  |||||||||| ||| |||||||||||| |||||||||  |||||||||    
T  28695684 aatgtcaaagtgttcaatttccaatgcaatttattacacaaacttttataaaaagttactatttaaagtgtttaactagt 28695605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 2796626 - 2796517
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||||||||||||| |||||||||||||||||||         |||||||||| ||||  |||||||||||||| ||| ||||||| |||| ||||    
T  2796626 tctttaagcatactaaataaagtaattattttttaaaa---------ttttcaattttcaatatactgattacacaaacttttataaaaaattactattt 2796536  T
Q  124 aaagtccttaactagtgcc 142  Q
     |  ||||||| |||||||    
T  2796535 tatatccttaattagtgcc 2796517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 27692822 - 27692744
Alignment:
Q  41 ttaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||||||||||||||||  |||||| || ||||| |||||||||||||| | |||||| ||||||| ||||||||||||    
T  27692822 ttaagtaattattttttttaaatgtaaatgtttttcaatttccaatgcatttattacataaatttttataaaaagttac 27692744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 28858098 - 28858152
Alignment:
Q  20 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt 74  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  28858098 gcattctttaagcattctaaattaagtaaatattctttaaaaatgtcaaattttt 28858152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 3882609 - 3882698
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat 108  Q
    |||| ||||||||||| ||||| |||| ||||||| |||||||| ||||||  ||||  ||| ||||||| |||||||||| ||||||||    
T  3882609 ggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattgattacacacattttcat 3882698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 5962023 - 5961954
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 141  Q
    ||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||  ||||| ||||||    
T  5962023 tttcaatttccaatgcattgattacataaattttcaaaaacagttactatttaaaggtcttaaatagtgc 5961954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 11944981 - 11944892
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||||||| || |||| || ||||||||||||| |||||||||||   || |||||| ||||||| ||| ||||||| ||||||||||||    
T  11944981 tctttaaggatcctaattttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaatacacaacttttcataaaaa 11944892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 37284981 - 37284896
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccat 121  Q
    ||||||||||||||||||||||||||| | ||| |||||||||| ||||||| | ||||| |||| ||  || |||||||||||||    
T  37284981 taaattaagtaattattttttaaaaatcttaaatttttcaattttcaatgcaataattacgcaaacttctataaaaaagttaccat 37284896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 10183219 - 10183299
Alignment:
Q  55 tttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    ||||||||||||||| ||||||||||  |||||| | |||| ||||||||||||||| | |||| ||||||  ||||||||    
T  10183219 tttaaaaatgtcaaaattttcaatttttaatgcattaattatacaaattttcataaatatttactatttaagatccttaac 10183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 9153581 - 9153494
Alignment:
Q  25 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 112  Q
    ||||||| || | |||||||| ||||||| |||||||| | ||||   |||||||||||||||| ||| |||||||||||| ||||||    
T  9153581 ctttaaggattccaaattaagaaattattctttaaaaaaggcaaacacttcaatttccaatgcattgaatacacaaatttttataaaa 9153494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 15806105 - 15806054
Alignment:
Q  67 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  15806105 aaagttttcaattttcaatgcattgattacacaaacttttataaaaagttac 15806054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 41543970 - 41544065
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgt-caaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||||||||||||| ||||||| | ||||||| ||||||||  | ||||   |||||||||||||||| ||| |||| || ||||||||||||    
T  41543970 ggcattctttaagcatattaaattaggaaattattctttaaaaaaattcaaatagttcaatttccaatgcaatgaatacataatttttcataaaaa 41544065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 3666533 - 3666431
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 136  Q
    ||||||||||||||||| ||||||||| | ||| |||| ||||  |||| || |||||||| ||| ||||||||||| |||  ||||||  || ||||||    
T  3666533 taaattaagtaattattctttaaaaatattaaaatttttaattctcaatacattgattacataaactttcataaaaaattattatttaagatctttaact 3666434  T
Q  137 agt 139  Q
    |||    
T  3666433 agt 3666431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 6761801 - 6761731
Alignment:
Q  57 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    |||||| ||||||  ||||||||||||||||| |||||||| ||||||||| |||||| |||  |||||||    
T  6761801 taaaaaagtcaaatatttcaatttccaatgcattgattacataaattttcaaaaaaagatacattttaaag 6761731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 33898685 - 33898643
Alignment:
Q  92 attacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  33898685 attacacaaatttttataaaaagttaccatttaaggtccttaa 33898643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 39647881 - 39647767
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| ||| |||||||||||||||||||||||||||| | ||   |||  ||||||||  |  ||||| |||||| ||| ||||||| ||  || ||    
T  39647881 tctttaaacattctaaattaagtaattattttttaaaaatattaagacttttgatttccaaaacgttgattgcacaaaattttataaaaaattgtcaatt 39647782  T
Q  124 aaagtccttaactag 138  Q
    |||||||||||||||    
T  39647781 aaagtccttaactag 39647767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 7271831 - 7271880
Alignment:
Q  77 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||||||||| |||||||| | ||||||||||||||||| ||||||||    
T  7271831 atttccaatgcattgattacatatattttcataaaaagttatcatttaaa 7271880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 8086966 - 8087051
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 122  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||  |||| || ||| ||| ||| ||| ||||||| ||| ||||    
T  8086966 taaattaaataattattttttaaaaatgttaaacttttcaatttttaatgtaccgataacataaacttttataaaaatttaacatt 8087051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 8333665 - 8333580
Alignment:
Q  41 ttaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 126  Q
    ||||||||||||| ||||| || ||||||  ||||||||  |||||||  || |||||||||||| ||||||| ||||||| ||||    
T  8333665 ttaagtaattattctttaataaagtcaaacatttcaattctcaatgcatcgaatacacaaatttttataaaaacttaccatctaaa 8333580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 44941189 - 44941072
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    |||||||| || |||||  ||| || ||| || |||||| || |||| |||| |||||| ||||| |||||||| | |||||| | | || |||||||||    
T  44941189 tctttaaggattctaaaagaagaaagtatgttataaaaaagttaaagatttcgatttccgatgcattgattacatatattttcctgataaattaccattt 44941090  T
Q  124 aaagtccttaactagtgc 141  Q
    |||| |||||||||||||    
T  44941089 aaaggccttaactagtgc 44941072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 814996 - 815088
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||| | ||||| || ||||||||||||||||  |||||  |  ||| |||||||||| |||||||||  ||||||||||||| ||||    
T  814996 tttaagcatcccaaatttagaaattattttttaaaaaaatcaaatgtcacaaattccaatgcattgattacaccgattttcataaaaacttac 815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 18684365 - 18684453
Alignment:
Q  29 aagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||||| |||||||| | | ||||| |||||||| |||| |   |||||||||||||| | | | ||||||||||||||||||||||||    
T  18684365 aagcatgctaaattaggaagttattctttaaaaaagtcatacaattcaatttccaatgtattaaatacacaaattttcataaaaagtta 18684453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 44838626 - 44838730
Alignment:
Q  36 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaa 134  Q
    |||||| ||||||||||| ||| ||||| | |||   |||||||| |||| || |||||||||||| ||| || |||||||||  |||||| ||||||||    
T  44838626 ctaaataaagtaattattcttttaaaatttaaaaaaattcaattttcaatacattgattacacaaacttttataaaaaagttattatttaaggtccttaa 44838725  T
Q  135 ctagt 139  Q
    |||||    
T  44838726 ctagt 44838730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 19890295 - 19890208
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||||| ||||||| |||||||||| ||| |||| |||||   || |||||||||||||| | | ||||||| ||||||| ||||    
T  19890295 tttaagcatcctaaatttagtaattattcttttaaaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaa 19890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 25622532 - 25622618
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    ||||||| ||| |||||||||||||||| ||||||||||| |||||  || |||||| ||||||| | |||||| |  ||||||||||    
T  25622532 tctttaaacattctaaattaagtaatta-tttttaaaaatatcaaatattacaattttcaatgcattaattacatattttttcataaa 25622618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 33963036 - 33962941
Alignment:
Q  39 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||| ||||||| |||||||| ||  ||   |||||||| ||||||| ||| | ||||| |||||||||||| |||  |||||||||||||||    
T  33963036 aattaagaaattattctttaaaaaagtttaacacttcaattttcaatgcattgaatgcacaatttttcataaaaatttattatttaaagtccttaa 33962941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 37313775 - 37313700
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 101  Q
    |||||||||  |||||||||||||| || ||||||||  ||||| |||| |||||  |||||||| ||||||||||    
T  37313775 tttaagcattttaaattaagtaatttttctttaaaaaaatcaaaatttttaatttgtaatgcactaattacacaaa 37313700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 16944811 - 16944873
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  16944811 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 16944873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 17015476 - 17015538
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  17015476 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 17015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 19495215 - 19495288
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 111  Q
    ||||||||||||||||| ||| |||| ||||||  |||| |||||||||||| |||||||||  ||||| |||||    
T  19495215 taaattaagtaattattattttaaaa-gtcaaatatttcgatttccaatgcattgattacacccatttttataaa 19495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 32859778 - 32859872
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||| ||||||| ||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||||    
T  32859778 ggcactctttaaacatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaagttttcataaaaa 32859872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 11364702 - 11364739
Alignment:
Q  90 tgattacacaaattttcataaaaagttaccatttaaag 127  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  11364702 tgattatacaaatttttataaaaagttaccatttaaag 11364739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 32787623 - 32787586
Alignment:
Q  90 tgattacacaaattttcataaaaagttaccatttaaag 127  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  32787623 tgattacacaaattttcatataaagttatcatttaaag 32787586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 1334997 - 1334881
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 117  Q
    |||| ||||||||||| | ||||| | |||||||| ||||||||  ||||   || |||||||||||||| | | || |||| |||||| |||||| |||    
T  1334997 ggcactctttaagcatcccaaatttaataattattctttaaaaaaatcaactattacaatttccaatgcattcaatatacaatttttcattaaaaactta 1334898  T
Q  118 ccatttaaagtccttaa 134  Q
     |||||||||| |||||    
T  1334897 tcatttaaagtgcttaa 1334881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 21004775 - 21004811
Alignment:
Q  90 tgattacacaaattttcataaaaagttaccatttaaa 126  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  21004775 tgattacacaaattttcaaaaaaaattaccatttaaa 21004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 42924525 - 42924425
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||  |||||||||||||| |||||  |||||  ||||||||| ||| | | ||||||||   ||||||||||| | |||| ||||    
T  42924525 tctttaagcattctaaaagaagtaattatttttaaaaaaaatcaaatatttcaattttcaacgtattgattacatgcattttcataaatatttactattt 42924426  T
Q  124 a 124  Q
    |    
T  42924425 a 42924425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 1e-33; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 14309197 - 14309074
Alignment:
Q  22 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagtta--c 118  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||| |||  |    
T  14309197 attctttaagcatattaaattaagtagttattctttaaaaatatcaaagttttcaatttccaatgcattaattacacaaattttcataaaaaaattactc 14309098  T
Q  119 catttaaagtccttaactagtgcc 142  Q
    ||||||| ||||||||||||||||    
T  14309097 catttaaggtccttaactagtgcc 14309074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 38595037 - 38594923
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 125  Q
    |||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||||||||| | |||| | ||||||||||||||| ||| |||||||    
T  38595037 tttaagtatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcattaattatataaattttcataaaaatttatcatttaa 38594938  T
Q  126 agtccttaactagtg 140  Q
    |||||||||| ||||    
T  38594937 agtccttaaccagtg 38594923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 26453748 - 26453631
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||  ||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||| ||||||  |||||||||    
T  26453748 tctttaaacattttaaattaagtaat-attttttaaaaatgtcaaacttttcaattttcaatgcgctggttacacaaatttttataaaagtttaccattt 26453650  T
Q  124 aaagtccttaactagtgcc 142  Q
    || |||||||| |||||||    
T  26453649 aaggtccttaattagtgcc 26453631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 16636742 - 16636656
Alignment:
Q  53 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 139  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  16636742 tttttaaaaatatcaaagttgtcaattttcaatgcactaattacacaaacttttataaaaagttaccatttaaggtccttaactagt 16636656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 17774388 - 17774272
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 124  Q
    |||||||||  ||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||| | |||||||||| ||||||||||||||| ||||||    
T  17774388 tttaagcattttaaatcaagtaattattctttaaaaatatcaaatttttcaatttccaatacactttattacacaaa-tttcataaaaagttatcattta 17774290  T
Q  125 aagtccttaactagtgcc 142  Q
    ||||| ||||| ||||||    
T  17774289 aagtcattaaccagtgcc 17774272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 26432261 - 26432378
Alignment:
Q  25 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 124  Q
    ||||||||||  ||||||||||||||||||||| |||||   ||| |||||||||||||||| ||||||||||| || ||||||||||| |||||||||     
T  26432261 ctttaagcattttaaattaagtaattatttttttaaaataataaacttttcaatttccaatgtactgattacactaactttcataaaaatttaccatttt 26432360  T
Q  125 aagtccttaactagtgcc 142  Q
    | || |||||||| ||||    
T  26432361 aggttcttaactaatgcc 26432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 22601786 - 22601890
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 136  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||  |||||||| ||||||||| ||||||| ||| ||||||| ||| ||||||    
T  22601786 taaattaagtaattattttttaaaaatatcaaaatttttaattttcaataaactgattatacaaatttttataaaaatttatcatttaaggtctttaact 22601885  T
Q  137 agtgc 141  Q
    |||||    
T  22601886 agtgc 22601890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 27325917 - 27325814
Alignment:
Q  39 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 138  Q
    ||||| ||||||||| ||||||||||||||| |||||||||| |||||||||| |||||  ||||||  |||||| ||| ||||||| ||||||||||||    
T  27325917 aattaggtaattattctttaaaaatgtcaaacttttcaattttcaatgcactggttacattaatttttgtaaaaatttatcatttaaggtccttaactag 27325818  T
Q  139 tgcc 142  Q
    ||||    
T  27325817 tgcc 27325814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 12221435 - 12221523
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 112  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||||||||||| ||||| ||||| |||||||||| |||||||| |||||    
T  12221435 tctttaaacatactaaattaagtagttattctttaaaattgtcaaagtttttaattttcaatgtactgattacataaattttcgtaaaa 12221523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 41568775 - 41568708
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg 91  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  41568775 tctttaagcatactaaattaagttattattcttcaaaaatgtcaaagttttcaattttcaatgcactg 41568708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 4695070 - 4695164
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||| |||||||||  ||||||| ||||||||| | |||||||| |||||||||||||||||||| ||||| || |||||||| ||||    
T  4695070 tctttaagcatgctaaattaaaaaattattctttaaaaatattaaagtttttaatttccaatgcactgattatacaaacttccataaaaaattac 4695164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 21259513 - 21259415
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 135  Q
    ||||||||  ||||||| |||||| |||||||| |||| ||||| |||||||||||||||||||| || |||||||||||| ||||||| ||| |||||    
T  21259513 taaattaaaaaattattctttaaagatgtcaaaatttttaattttcaatgcactgattacacaaacttccataaaaagttatcatttaaggtctttaac 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 29829588 - 29829704
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| |||  ||||||| ||||||||||||||||||||||| | |||||| |||||||| ||||||||| |||||  |||||||||| | || ||||    
T  29829588 tctttaaacattttaaattatgtaattattttttaaaaatgtcacacttttcagtttccaattcactgattatacaaacattcataaaaattaactattt 29829687  T
Q  124 aaagtccttaactagtg 140  Q
     | ||| ||||||||||    
T  29829688 gaggtctttaactagtg 29829704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 5356410 - 5356295
Alignment:
Q  20 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 119  Q
    |||||||||||| |||| ||| |||| ||||| ||| |||||| ||||||  |||| |||| | ||||| |||||||||| |||||||| | ||||||||    
T  5356410 gcattctttaaggataccaaaataagaaattaatttataaaaacgtcaaatatttcgattttcgatgcattgattacacatattttcatgataagttacc 5356311  T
Q  120 atttaaagtccttaac 135  Q
    |||||||| |||||||    
T  5356310 atttaaagaccttaac 5356295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 3263772 - 3263862
Alignment:
Q  51 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 141  Q
    ||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||||||||    
T  3263772 attttataaaaaagtcaaagatttcgatttccgatgcattgattacacatattttaatgataagttaccatttaaagaccttaactagtgc 3263862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 10228317 - 10228426
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||| | ||||||||||| ||| ||||| | |||||||||||||||| |||||||| ||||||||| |||  ||||||||||| ||||    
T  10228317 tctttaagcatgctaa-taaagtaattattctttcaaaatttaaaagttttcaatttccgatgcactggttacacaaacttttttaaaaagttactattt 10228415  T
Q  124 aaagtccttaa 134  Q
    || ||| ||||    
T  10228416 aatgtctttaa 10228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 27794944 - 27794854
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 137  Q
    ||||||| ||| ||||| ||||| ||||||||||| |||||  |||||| ||||| ||| ||||||| |||||||||||||||||||||||    
T  27794944 aattattgttttaaaatatcaaaattttcaatttcaaatgcgatgattatacaaacttttataaaaaattaccatttaaagtccttaacta 27794854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 10410443 - 10410567
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtta 117  Q
    |||| ||||||| | | ||||||||||||||  |||||||||||||||| | | ||||||||||||||||| | |||  ||||| ||| |||||||||||    
T  10410443 ggcactctttaaactttctaaattaagtaatatttttttaaaaatgtcagaatattcaatttccaatgcactttatttaacaaacttttataaaaagtta 10410542  T
Q  118 ccatttaaagtccttaactagtgcc 142  Q
    | ||||||| | |||||| ||||||    
T  10410543 caatttaaaatgcttaaccagtgcc 10410567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 26686747 - 26686667
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26686747 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 26956478 - 26956398
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 117  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26956478 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26956398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 5758555 - 5758670
Alignment:
Q  19 ggcattctttaagcatactaaattaa--gtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtt 116  Q
    |||| ||||||||||| |||||||||  |||| |||| |||||||| |  |||  |||||||| |||||  ||||| |||||||| ||||||||||| ||    
T  5758555 ggcactctttaagcattctaaattaaaagtaactattctttaaaaaagcgaaacatttcaattcccaat--actgaatacacaaactttcataaaaactt 5758652  T
Q  117 accatttaaagtccttaa 134  Q
    ||||||||||||||||||    
T  5758653 accatttaaagtccttaa 5758670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 36609237 - 36609150
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||| ||| ||||||||| |||||||| || |||||| |||||||||||||||| ||||| ||| |||||||||| ||| |||||||    
T  36609237 tttaaacattctaaattaaataattattcttcaaaaatatcaaagttttcaattttcaatgtactaattacacaaacttttataaaaa 36609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 8247092 - 8247180
Alignment:
Q  51 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 139  Q
    ||||| |||||| ||||||  |||| |||||| ||||| |||||| |||| ||||||| | |||||||||||||||| |||||||||||    
T  8247092 attttataaaaaagtcaaatatttcgatttccgatgcattgattatacaacttttcatgataagttaccatttaaagaccttaactagt 8247180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 28639570 - 28639669
Alignment:
Q  44 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    |||||||||| ||||||||||| ||||||||||  ||||||||||| | |||||||||| ||| ||||||| ||   |||||||||||||| | ||||||    
T  28639570 agtaattattctttaaaaatgttaaagttttcagcttccaatgcactttattacacaaacttttataaaaaattgttatttaaagtccttatccagtgcc 28639669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 43000760 - 43000867
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaa-gttaccatttaaagtccttaa 134  Q
    ||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||| |  | | ||||| ||||||||||| || || ||||||||| |||||    
T  43000760 taaataaagtaattattctttaaaaatgtcaaaatttttaattttcaatgcactttgtcaaacaaactttcataaaaaggtaacaatttaaagtacttaa 43000859  T
Q  135 ctagtgcc 142  Q
    ||||||||    
T  43000860 ctagtgcc 43000867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 10051755 - 10051845
Alignment:
Q  51 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 141  Q
    ||||| |||||| ||||||  |||  |||||| ||||| |||||| |||| ||||||||| ||||||||||||||||  ||||||||||||    
T  10051755 attttataaaaaagtcaaatatttatatttccgatgcattgattatacaacttttcataataagttaccatttaaaggtcttaactagtgc 10051845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 31914168 - 31914277
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||  ||| |||||    |||| ||| ||||| || ||||||||| | |||||||||    
T  31914168 tctttaagcattctaaattaagtaattattctttaaaaa-gtcaaacattttaattttttgtgcattgaatacaccaaatttcataaagatttaccattt 31914266  T
Q  124 aaagtccttaa 134  Q
    ||| |||||||    
T  31914267 aaaatccttaa 31914277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 39177675 - 39177768
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||| |||||||| || |||||| ||||||||||  ||| ||||| | ||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  39177675 ggcactctttaag-atgctaaataaagtaattatcctttcaaaatttaaaagttttcaatttccaatacactgattgcacaactttttataaaaa 39177768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 26663635 - 26663708
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 99  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26663635 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26663708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 26935230 - 26935303
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 99  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26935230 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26935303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 31672444 - 31672513
Alignment:
Q  58 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 127  Q
    ||||| ||||||  ||||||||||||||||| |||||||| ||| ||||| ||||||||||| |||||||    
T  31672444 aaaaaagtcaaatgtttcaatttccaatgcattgattacaaaaaatttcaaaaaaagttaccttttaaag 31672513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 967100 - 967194
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||||| |||||| |  |||||| ||||||||  |||||   |||||||||||||||| ||| ||||  ||||||||| |||||||||    
T  967100 tctttaagcataccaaattaggatattattctttaaaaaattcaaatagttcaatttccaatgcattgaatacatgaattttcatgaaaagttac 967194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 22473493 - 22473551
Alignment:
Q  84 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 142  Q
    ||||| |||||||||| |||||||  | |||||||||||||||| ||||||||||||||    
T  22473493 atgcattgattacacatattttcacgataagttaccatttaaagcccttaactagtgcc 22473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 30104797 - 30104907
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 117  Q
    |||| ||||||||||| | ||||| ||||| |||||||| |||| |||||   || |||||||||||||| | | ||||||| |||||| |||||| |||    
T  30104797 ggcactctttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcattcaatacacaacttttcattaaaaactta 30104896  T
Q  118 ccatttaaagt 128  Q
    ||| |||||||    
T  30104897 ccacttaaagt 30104907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 31889662 - 31889708
Alignment:
Q  72 tttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  31889662 tttcaatttctaatgcattgattacacatattttcataaaaagttac 31889708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 34032203 - 34032125
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 97  Q
    |||| ||||||||||| ||||| |||||||||||| |||||||| || |||  |||||||||| || ||| ||||||||    
T  34032203 ggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttcaaaggcaatgattaca 34032125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 14475085 - 14475009
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||| | |||||||||||||  ||||||||||  ||||  |||||||| ||||||||| |||||||||| ||||    
T  14475085 aattattctataaaaatgtcaaatatttcaatttcagatgctttgattacataaattttcaaaaaaagttactattt 14475009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 30501253 - 30501129
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 117  Q
    |||| ||||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||    
T  30501253 ggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaactta 30501154  T
Q  118 ccatttaaagtccttaactagtgcc 142  Q
    | ||||||||| |||||| ||||||    
T  30501153 ctatttaaagtgcttaacaagtgcc 30501129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 30541596 - 30541472
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 117  Q
    |||| ||||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||    
T  30541596 ggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaactta 30541497  T
Q  118 ccatttaaagtccttaactagtgcc 142  Q
    | ||||||||| |||||| ||||||    
T  30541496 ctatttaaagtgcttaacaagtgcc 30541472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 14042484 - 14042571
Alignment:
Q  47 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    ||||||| |||||||| ||||||  |||  |||||||||||| |||||| ||||||||| || |||| ||  ||||||||||| ||||    
T  14042484 aattattatttaaaaaagtcaaatattttgatttccaatgcattgattatacaaatttttattaaaatttgtcatttaaagtctttaa 14042571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 25437983 - 25437888
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    ||||||||||| |||||||||| | ||||| ||||||||  || |||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  25437983 tctttaagcatgctaaattaagaagttattctttaaaaaaagtgaaacagttcaatttccaatgtattaaatacacaagttttcataaaaagttac 25437888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 779079 - 779192
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||| ||| | ||| | ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||  ||||| |||| |  |||    
T  779079 ggcactctttaaacattcaaaaattagtaattattttttaaaaa-gttaaatgtttcgatttccaatgcattgattacacactttttcgtaaatacatac 779177  T
Q  119 catttaaagtcctta 133  Q
     ||||| ||||||||    
T  779178 tatttatagtcctta 779192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 28207778 - 28207696
Alignment:
Q  59 aaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtg 140  Q
    |||||||||||||||| ||| || ||||||||  ||| |||||| ||||||||| | || | ||||||||| |||||||||||    
T  28207778 aaaatgtcaaagtttttaatatcaaatgcactttattgcacaaactttcataaacatttgctatttaaagttcttaactagtg 28207696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 2918705 - 2918616
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    |||||||||||   ||||| | |||||||||||||||||||||||   ||  ||||||||||||| | | ||||||| ||||||| ||||    
T  2918705 tctttaagcatttcaaatttaataattattttttaaaaatgtcaactattataatttccaatgcatttaatacacaacttttcattaaaa 2918616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 20125713 - 20125652
Alignment:
Q  73 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 134  Q
    |||||||| | ||||||| | | ||||| |||||||||||| |||| |||||||||||||||    
T  20125713 ttcaattttcgatgcactaaatgcacaatttttcataaaaatttactatttaaagtccttaa 20125652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 24041131 - 24041030
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 123  Q
    ||||||||||||  |||||| | ||||||| ||||||||  |||||   || |||||||||| || | | |||| || ||||||||||||||||| ||||    
T  24041131 tctttaagcatatcaaattatgaaattattctttaaaaaattcaaatagtttaatttccaatacattaaatacataacttttcataaaaagttactattt 24041032  T
Q  124 aa 125  Q
    ||    
T  24041031 aa 24041030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 36160317 - 36160362
Alignment:
Q  24 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa 69  Q
    ||||||||||| ||||| |||| |||||||||||||||| ||||||    
T  36160317 tctttaagcattctaaaataagcaattattttttaaaaaagtcaaa 36160362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 9740932 - 9740968
Alignment:
Q  26 tttaagcatactaaattaagtaattattttttaaaaa 62  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  9740932 tttaaacattctaaattaagtaattattttttaaaaa 9740968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 26694 - 26793
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 118  Q
    |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  26694 ggcactctttaagcatgctaaattaagtaattattattttaaaatgtcaaagttttcaattttcaatgcactgattacacaaactttcgtaaaaagttac 26793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 19578 - 19683
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 136  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||  |||  |  ||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  19578 taaattaagtaattattctttaaaaatgttaaagttttcaatttttaatatatcgattacacaaattttcataaaaagttatcatttaaggtctttaact 19677  T
Q  137 agtgcc 142  Q
    ||||||    
T  19678 agtgcc 19683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 35274 - 35376
Alignment:
Q  37 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 136  Q
    ||||| ||||||||||||||||||| ||| ||| |||||||||| || |||| |||||||| ||| ||||||||||| |||| || ||| ||||||||||    
T  35274 taaatcaagtaattattttttaaaa-tgttaaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatgtccttaact 35372  T
Q  137 agtg 140  Q
    ||||    
T  35373 agtg 35376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5755 - 5816
Alignment:
Q  19 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaattt 80  Q
    |||| |||||||| ||  |||||||||||||| || ||||||||||||||||||||||||||    
T  5755 ggcactctttaagaattttaaattaagtaatttttctttaaaaatgtcaaagttttcaattt 5816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 219185 - 219277
Alignment:
Q  21 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 113  Q
    ||||||||||||||  ||||||| | ||||||| |||| ||| ||||||   |||||||||||||||| | | |||| | ||||| |||||||    
T  219185 cattctttaagcattttaaattaggaaattattctttacaaaagtcaaatagttcaatttccaatgcattaaatacatatatttttataaaaa 219277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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