View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1799_low_4 (Length: 239)
Name: NF1799_low_4
Description: NF1799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1799_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31896308 - 31896533
Alignment:
| Q |
1 |
tggttacacactactacactcaagcatctaaaaa-----gaacttaatgaacacgttgaaagtggtaattgtgaaagggtccattctaattatacataca |
95 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31896308 |
tggttacacactactacactcaagcatctaaaaattatagaacttaatgaacatgttgaaagtggtaattgtgaaagggtccattctaattatacataca |
31896407 |
T |
|
| Q |
96 |
agatcatataacataactgagcaaaagctcctattcggtcacatgtatcttcactggaaactcctttttaacccactctagataacctcctcccatgttg |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31896408 |
agatcatataacataactgagcaaaagctcctattcggtcacatgtatcttcactggaaactcctttttaacccactctagataacctcctcccatgttg |
31896507 |
T |
|
| Q |
196 |
tacacatccttaaacccctgccacac |
221 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
31896508 |
tacacatccttaaacccctgccacac |
31896533 |
T |
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