View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18002_low_18 (Length: 261)
Name: NF18002_low_18
Description: NF18002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18002_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 3613245 - 3613478
Alignment:
| Q |
15 |
tactattttagtgtattaattaattatccacctaacaaatttgtataattgagactgagtactcacccacatttttcatcaatcatcacaagagactgat |
114 |
Q |
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| T |
3613245 |
tactattttagtgtattaattaattatccacctaacaaatttgtataattgagactgagtactcacccacatttttcgtcaatcatcacaagagactgat |
3613344 |
T |
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| Q |
115 |
gataaaatagttaaggatattttggtaaataattatatattactgtaatacaagaaattaaacaagagataactgagaaataatgataactattcataca |
214 |
Q |
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| T |
3613345 |
gataaaatagttaaggatattttggtaaataattatatattactgtaatacaagaaattaaacaagagataactgagaaataatgataactattcataca |
3613444 |
T |
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| Q |
215 |
cgccttaannnnnnnagtgtactggttaattaat |
248 |
Q |
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|||||||| ||||||||||||||||||| |
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| T |
3613445 |
cgccttaatttttttagtgtactggttaattaat |
3613478 |
T |
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