View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18003_high_58 (Length: 264)
Name: NF18003_high_58
Description: NF18003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18003_high_58 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 8046062 - 8046290
Alignment:
| Q |
16 |
ataaactagcaactgttaactgacagatctacaagaggtattataatgttattatatgatatattgaaagtgatattgtaccaaacaatagtgagcataa |
115 |
Q |
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||||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
8046062 |
ataaactagcaactgttaactgacacatctacatgaagtattataatgttat---atgatatattgaaagtgatattgtaccaaacaatagtgaacataa |
8046158 |
T |
|
| Q |
116 |
ttttcagaaacaattatttgataccatgaaagttgaaactaccagtgtccttgattcaactataggtaagtgggtaacccattcttctgtgcctcacaca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8046159 |
ttttcagaaacaattatttgataccatgaaagttgaaactaccagtgtccttgattcaactataggtaagtgggtaacccattcttctgtgcctcacaca |
8046258 |
T |
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| Q |
216 |
cgcctacatgtgcatatttaatactactagct |
247 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
8046259 |
cgcctacatgtgcatatttaatactactagct |
8046290 |
T |
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