View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18003_low_47 (Length: 328)
Name: NF18003_low_47
Description: NF18003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18003_low_47 |
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Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 44883130 - 44883450
Alignment:
| Q |
1 |
ttggattcacctcaggtacaacactttgtggtattagtggcatagttgaagctacgacatttgtgtcagataaattggattgtaaagccatgttgtatgg |
100 |
Q |
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| T |
44883130 |
ttggattcacctcaggtacaacactttgtggtattagtggcatagttgaagctacgacatttgtgtcagataaattggattgtaaagccatgttgtatgg |
44883229 |
T |
|
| Q |
101 |
ttgtgtcgatccatgtccaattggcattacataaacaggatactgatgaagttggtgtgattgtgatgttggggcataaactgggtagtaggatgacatt |
200 |
Q |
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| T |
44883230 |
ttgtgtcgatccatgtccaattggcattacataaacaggatactgatgaagttggtgtgattgtgatggtggggcataaactgggtagtaggatgacaat |
44883329 |
T |
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| Q |
201 |
ggaacttgacctgtacctataggacgatgaatatagacaaattgatgttgttgatatgtctgaggttgctggttttgattcaattgttgttgaggtgggg |
300 |
Q |
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| T |
44883330 |
ggaacttgacctgtacctataggacgatgaatatagacaaattgatgttgttgatatgtctgaggttgctggttttgattcaattgttgttggggtgggg |
44883429 |
T |
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| Q |
301 |
tgtaaccaagatcctttgctt |
321 |
Q |
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||||| ||||||||||||||| |
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| T |
44883430 |
tgtaatcaagatcctttgctt |
44883450 |
T |
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