View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18004_low_6 (Length: 293)

Name: NF18004_low_6
Description: NF18004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18004_low_6
NF18004_low_6
[»] chr7 (45 HSPs)
chr7 (152-277)||(24470326-24470451)
chr7 (152-277)||(24475274-24475399)
chr7 (154-277)||(8611680-8611803)
chr7 (154-277)||(49166860-49166983)
chr7 (158-277)||(47749671-47749790)
chr7 (154-277)||(40775200-40775323)
chr7 (178-277)||(28015313-28015413)
chr7 (178-277)||(25855278-25855381)
chr7 (178-264)||(8319270-8319357)
chr7 (188-275)||(29804736-29804823)
chr7 (158-264)||(35141824-35141930)
chr7 (178-277)||(5025113-5025214)
chr7 (154-271)||(23732457-23732574)
chr7 (155-271)||(33530532-33530646)
chr7 (156-277)||(37399551-37399682)
chr7 (210-277)||(30992881-30992948)
chr7 (182-263)||(21329368-21329448)
chr7 (165-276)||(23177640-23177752)
chr7 (214-277)||(43807208-43807271)
chr7 (169-255)||(38649438-38649524)
chr7 (152-275)||(7985822-7985946)
chr7 (178-265)||(14734120-14734207)
chr7 (154-277)||(35135241-35135364)
chr7 (232-277)||(42490713-42490758)
chr7 (191-255)||(5237914-5237977)
chr7 (153-277)||(10250539-10250662)
chr7 (206-277)||(16263372-16263444)
chr7 (200-272)||(24045295-24045367)
chr7 (178-266)||(34595719-34595807)
chr7 (213-277)||(44681454-44681517)
chr7 (216-277)||(26017716-26017777)
chr7 (188-247)||(29804976-29805035)
chr7 (182-277)||(35661494-35661580)
chr7 (177-276)||(46918358-46918456)
chr7 (183-262)||(47156359-47156437)
chr7 (183-264)||(41748572-41748653)
chr7 (183-264)||(43483557-43483637)
chr7 (158-210)||(135230-135282)
chr7 (154-218)||(11001794-11001857)
chr7 (209-252)||(24988455-24988497)
chr7 (201-247)||(21954924-21954969)
chr7 (211-277)||(22751429-22751495)
chr7 (240-277)||(9933866-9933903)
chr7 (233-277)||(39090127-39090172)
chr7 (209-253)||(21603441-21603484)
[»] chr3 (51 HSPs)
chr3 (154-277)||(50519723-50519846)
chr3 (154-277)||(22286807-22286930)
chr3 (154-277)||(20201116-20201239)
chr3 (154-277)||(20203298-20203421)
chr3 (154-275)||(41882468-41882589)
chr3 (155-277)||(1165454-1165576)
chr3 (156-277)||(35501817-35501937)
chr3 (154-277)||(21803463-21803586)
chr3 (178-277)||(40462053-40462152)
chr3 (155-277)||(43029617-43029739)
chr3 (156-276)||(20251586-20251707)
chr3 (178-277)||(42106068-42106168)
chr3 (178-278)||(1220272-1220372)
chr3 (209-277)||(45664217-45664285)
chr3 (178-261)||(22844008-22844091)
chr3 (163-277)||(25374128-25374241)
chr3 (178-275)||(37051581-37051678)
chr3 (178-266)||(1806529-1806617)
chr3 (178-277)||(40796990-40797089)
chr3 (154-277)||(43242743-43242867)
chr3 (178-277)||(43839576-43839673)
chr3 (178-271)||(53426761-53426854)
chr3 (165-277)||(913374-913488)
chr3 (178-277)||(11846572-11846671)
chr3 (163-229)||(47914689-47914755)
chr3 (154-276)||(29776747-29776857)
chr3 (154-277)||(33977980-33978101)
chr3 (183-264)||(2598045-2598126)
chr3 (206-271)||(4019587-4019651)
chr3 (163-257)||(27831057-27831147)
chr3 (178-277)||(34766938-34767035)
chr3 (187-277)||(33076272-33076368)
chr3 (163-277)||(14741383-14741486)
chr3 (197-277)||(36540730-36540809)
chr3 (178-262)||(21086013-21086097)
chr3 (234-277)||(3088720-3088763)
chr3 (163-226)||(27056000-27056063)
chr3 (154-210)||(28995418-28995473)
chr3 (218-277)||(7656535-7656592)
chr3 (238-277)||(29182666-29182705)
chr3 (219-266)||(33070152-33070199)
chr3 (213-247)||(25939564-25939598)
chr3 (184-277)||(26412296-26412388)
chr3 (191-248)||(37451698-37451754)
chr3 (209-254)||(45664216-45664261)
chr3 (209-253)||(1165478-1165522)
chr3 (209-252)||(11819061-11819104)
chr3 (209-253)||(20201140-20201184)
chr3 (209-253)||(20203322-20203366)
chr3 (209-252)||(30156389-30156432)
chr3 (209-252)||(36691907-36691950)
[»] chr2 (55 HSPs)
chr2 (154-277)||(25516427-25516550)
chr2 (154-277)||(41176795-41176919)
chr2 (154-277)||(43566810-43566931)
chr2 (175-277)||(27191393-27191495)
chr2 (175-277)||(27841207-27841309)
chr2 (158-276)||(44167768-44167886)
chr2 (155-277)||(25771379-25771501)
chr2 (155-277)||(40125323-40125445)
chr2 (164-277)||(3464902-3465015)
chr2 (172-277)||(6089844-6089949)
chr2 (165-277)||(3390376-3390488)
chr2 (170-277)||(42105810-42105917)
chr2 (155-277)||(27024197-27024319)
chr2 (155-277)||(37883587-37883709)
chr2 (154-277)||(3602918-3603041)
chr2 (158-277)||(36507868-36507987)
chr2 (167-277)||(5930369-5930479)
chr2 (182-277)||(10588999-10589095)
chr2 (179-277)||(26491261-26491359)
chr2 (210-277)||(7640414-7640481)
chr2 (155-277)||(25623103-25623225)
chr2 (178-277)||(19581060-19581160)
chr2 (178-277)||(41841906-41842006)
chr2 (195-277)||(29812673-29812755)
chr2 (178-278)||(25237383-25237483)
chr2 (182-229)||(44951463-44951510)
chr2 (207-264)||(15674045-15674102)
chr2 (179-275)||(2251405-2251501)
chr2 (180-264)||(9715616-9715700)
chr2 (178-277)||(34479913-34480012)
chr2 (207-265)||(16880029-16880087)
chr2 (190-266)||(5071439-5071515)
chr2 (226-277)||(29734194-29734246)
chr2 (178-277)||(3398037-3398138)
chr2 (191-277)||(44441356-44441442)
chr2 (178-235)||(4878795-4878852)
chr2 (156-277)||(24500457-24500575)
chr2 (192-242)||(19953355-19953405)
chr2 (163-229)||(31263060-31263126)
chr2 (155-209)||(32909010-32909064)
chr2 (196-263)||(13268549-13268616)
chr2 (209-253)||(25516482-25516526)
chr2 (206-249)||(35353637-35353680)
chr2 (154-236)||(16720916-16720998)
chr2 (209-253)||(2251427-2251471)
chr2 (209-253)||(3390420-3390464)
chr2 (209-252)||(11937959-11938002)
chr2 (209-252)||(12891189-12891232)
chr2 (209-253)||(16880041-16880085)
chr2 (207-247)||(17037737-17037777)
chr2 (209-252)||(20561232-20561275)
chr2 (209-253)||(25771433-25771477)
chr2 (209-253)||(27191417-27191461)
chr2 (209-253)||(27841231-27841275)
chr2 (209-252)||(32015198-32015241)
[»] chr4 (50 HSPs)
chr4 (154-277)||(54420770-54420893)
chr4 (155-277)||(9661787-9661909)
chr4 (178-277)||(16991829-16991928)
chr4 (163-277)||(28588503-28588617)
chr4 (178-277)||(4634240-4634339)
chr4 (155-270)||(1657631-1657750)
chr4 (154-277)||(1645999-1646122)
chr4 (156-278)||(6408374-6408497)
chr4 (178-266)||(3673580-3673668)
chr4 (178-277)||(46728978-46729076)
chr4 (187-263)||(43156742-43156819)
chr4 (210-277)||(23067906-23067973)
chr4 (154-277)||(37869475-37869597)
chr4 (171-277)||(51646043-51646149)
chr4 (189-265)||(14542582-14542658)
chr4 (178-277)||(3168997-3169096)
chr4 (187-278)||(11817038-11817129)
chr4 (200-275)||(41486554-41486629)
chr4 (187-277)||(34115710-34115800)
chr4 (183-277)||(30416679-30416774)
chr4 (178-275)||(33020985-33021083)
chr4 (155-259)||(38546188-38546290)
chr4 (156-266)||(7242838-7242945)
chr4 (210-270)||(52555786-52555846)
chr4 (168-272)||(4622774-4622877)
chr4 (155-271)||(29577149-29577265)
chr4 (178-230)||(40859618-40859670)
chr4 (155-221)||(9474623-9474689)
chr4 (182-275)||(35338356-35338448)
chr4 (213-270)||(42972030-42972087)
chr4 (178-230)||(15730075-15730127)
chr4 (207-266)||(5388501-5388560)
chr4 (231-277)||(53903620-53903666)
chr4 (213-272)||(4959638-4959697)
chr4 (197-276)||(46775915-46775993)
chr4 (235-277)||(38434612-38434654)
chr4 (215-269)||(44375330-44375384)
chr4 (178-227)||(9549434-9549483)
chr4 (178-275)||(23925998-23926095)
chr4 (233-277)||(46716952-46716996)
chr4 (152-192)||(53903560-53903600)
chr4 (209-252)||(23067930-23067973)
chr4 (187-230)||(46829375-46829418)
chr4 (196-277)||(12519632-12519712)
chr4 (231-276)||(26576562-26576607)
chr4 (212-253)||(33021011-33021052)
chr4 (209-253)||(43244480-43244524)
chr4 (187-252)||(56061956-56062019)
chr4 (209-253)||(3673611-3673655)
chr4 (209-253)||(9661841-9661885)
[»] chr5 (38 HSPs)
chr5 (154-277)||(28618537-28618660)
chr5 (178-266)||(34893985-34894073)
chr5 (155-277)||(31645763-31645885)
chr5 (164-277)||(6887236-6887349)
chr5 (152-277)||(33486627-33486753)
chr5 (178-277)||(6647971-6648070)
chr5 (154-277)||(4070488-4070610)
chr5 (154-277)||(2415333-2415456)
chr5 (188-282)||(19646094-19646188)
chr5 (155-277)||(18472782-18472902)
chr5 (178-278)||(41988141-41988241)
chr5 (178-263)||(37424949-37425035)
chr5 (182-277)||(41554447-41554543)
chr5 (182-277)||(9035006-9035101)
chr5 (172-277)||(8812209-8812315)
chr5 (178-277)||(15710497-15710598)
chr5 (178-277)||(41357995-41358095)
chr5 (210-277)||(4726986-4727053)
chr5 (208-277)||(29310407-29310476)
chr5 (153-277)||(41063454-41063576)
chr5 (197-266)||(40565224-40565293)
chr5 (178-255)||(34950433-34950511)
chr5 (236-277)||(5378317-5378358)
chr5 (178-266)||(17326246-17326335)
chr5 (178-277)||(12524680-12524779)
chr5 (187-277)||(6074794-6074887)
chr5 (187-277)||(34843880-34843972)
chr5 (222-277)||(13079141-13079194)
chr5 (210-277)||(34873849-34873917)
chr5 (187-266)||(8957177-8957256)
chr5 (163-276)||(22397606-22397720)
chr5 (209-265)||(28040607-28040663)
chr5 (209-252)||(7771906-7771949)
chr5 (182-218)||(10924186-10924222)
chr5 (222-250)||(13007688-13007716)
chr5 (209-252)||(17096342-17096385)
chr5 (209-252)||(17331306-17331349)
chr5 (208-252)||(30371596-30371640)
[»] scaffold0045 (1 HSPs)
scaffold0045 (164-277)||(9706-9819)
[»] chr8 (48 HSPs)
chr8 (153-277)||(9269953-9270077)
chr8 (163-277)||(31874027-31874140)
chr8 (178-277)||(16937397-16937496)
chr8 (182-277)||(36545839-36545934)
chr8 (178-264)||(10042718-10042804)
chr8 (155-270)||(23766676-23766789)
chr8 (154-277)||(9992598-9992721)
chr8 (178-277)||(15665496-15665595)
chr8 (182-277)||(26937486-26937581)
chr8 (178-277)||(37658923-37659022)
chr8 (182-277)||(32256779-32256875)
chr8 (178-277)||(13864316-13864415)
chr8 (178-262)||(32061751-32061835)
chr8 (189-265)||(44295284-44295360)
chr8 (210-275)||(8054868-8054933)
chr8 (178-266)||(14327436-14327524)
chr8 (187-282)||(5989596-5989691)
chr8 (154-253)||(14115875-14115973)
chr8 (178-264)||(37719808-37719894)
chr8 (183-277)||(3680883-3680979)
chr8 (207-277)||(13977387-13977457)
chr8 (154-207)||(16996988-16997041)
chr8 (182-266)||(32920613-32920697)
chr8 (187-266)||(284544-284623)
chr8 (187-266)||(631254-631333)
chr8 (187-266)||(817066-817145)
chr8 (154-229)||(37129764-37129838)
chr8 (187-266)||(14530977-14531056)
chr8 (178-264)||(18190915-18191000)
chr8 (216-277)||(15237695-15237756)
chr8 (178-235)||(31713135-31713192)
chr8 (191-266)||(1215408-1215483)
chr8 (207-276)||(5917800-5917866)
chr8 (191-277)||(31147859-31147944)
chr8 (153-270)||(7281192-7281309)
chr8 (234-277)||(16996945-16996987)
chr8 (226-277)||(17019109-17019160)
chr8 (226-277)||(17549546-17549597)
chr8 (191-254)||(27534480-27534543)
chr8 (208-266)||(11655979-11656037)
chr8 (155-263)||(12244289-12244398)
chr8 (152-278)||(14919449-14919570)
chr8 (206-278)||(16938328-16938401)
chr8 (209-252)||(1810327-1810370)
chr8 (197-264)||(6833454-6833522)
chr8 (182-234)||(8073470-8073522)
chr8 (209-252)||(10147924-10147967)
chr8 (209-252)||(37612631-37612674)
[»] chr6 (29 HSPs)
chr6 (163-265)||(16913270-16913372)
chr6 (171-276)||(12576537-12576642)
chr6 (154-277)||(20844940-20845064)
chr6 (178-277)||(4663878-4663977)
chr6 (154-277)||(7049180-7049302)
chr6 (210-277)||(19759777-19759844)
chr6 (183-264)||(10744541-10744622)
chr6 (178-271)||(32457603-32457696)
chr6 (154-273)||(32574386-32574505)
chr6 (163-277)||(8644187-8644301)
chr6 (182-277)||(548923-549016)
chr6 (167-275)||(15128209-15128316)
chr6 (184-266)||(891551-891633)
chr6 (156-266)||(32257919-32258028)
chr6 (178-264)||(32804252-32804337)
chr6 (187-272)||(31747926-31748009)
chr6 (185-246)||(34020582-34020643)
chr6 (209-277)||(13234166-13234233)
chr6 (177-272)||(33194561-33194656)
chr6 (163-229)||(31804214-31804280)
chr6 (156-224)||(8633275-8633343)
chr6 (209-253)||(12576560-12576604)
chr6 (239-274)||(1944114-1944149)
chr6 (209-253)||(15590178-15590222)
chr6 (209-265)||(21507895-21507951)
chr6 (231-276)||(22530290-22530335)
chr6 (248-277)||(23843482-23843511)
chr6 (209-253)||(4663902-4663946)
chr6 (209-253)||(16913316-16913360)
[»] chr1 (49 HSPs)
chr1 (155-277)||(22344970-22345092)
chr1 (154-277)||(14717301-14717423)
chr1 (179-277)||(6212944-6213042)
chr1 (178-277)||(44514047-44514147)
chr1 (208-277)||(5832220-5832289)
chr1 (213-277)||(44562807-44562871)
chr1 (178-276)||(30853841-30853940)
chr1 (178-264)||(52839380-52839466)
chr1 (1-119)||(51921324-51921423)
chr1 (154-209)||(4564484-4564539)
chr1 (211-277)||(630843-630909)
chr1 (155-277)||(37685155-37685275)
chr1 (155-277)||(37700243-37700363)
chr1 (178-266)||(13691827-13691916)
chr1 (179-277)||(10877303-10877402)
chr1 (210-277)||(21326462-21326529)
chr1 (155-251)||(26199531-26199630)
chr1 (177-277)||(33703567-33703667)
chr1 (178-266)||(38646541-38646629)
chr1 (197-276)||(17579744-17579823)
chr1 (197-264)||(52839497-52839564)
chr1 (231-277)||(23320450-23320496)
chr1 (163-255)||(22032169-22032262)
chr1 (178-271)||(35077954-35078045)
chr1 (202-277)||(12148106-12148181)
chr1 (187-263)||(46589140-46589217)
chr1 (191-277)||(52752002-52752084)
chr1 (178-226)||(45658672-45658720)
chr1 (222-277)||(8893294-8893349)
chr1 (191-265)||(9189211-9189285)
chr1 (187-253)||(18889032-18889097)
chr1 (220-277)||(45659041-45659098)
chr1 (154-246)||(27469821-27469913)
chr1 (187-266)||(2350588-2350667)
chr1 (238-277)||(4564535-4564574)
chr1 (238-277)||(40992351-40992390)
chr1 (202-277)||(48655124-48655199)
chr1 (153-239)||(29066988-29067074)
chr1 (184-276)||(2875625-2875717)
chr1 (232-277)||(15276508-15276553)
chr1 (178-219)||(23257063-23257104)
chr1 (209-253)||(5832221-5832265)
chr1 (178-225)||(1767936-1767983)
chr1 (226-277)||(49651840-49651891)
chr1 (192-230)||(10264743-10264781)
chr1 (209-266)||(33939088-33939145)
chr1 (209-252)||(424391-424434)
chr1 (209-252)||(12871599-12871642)
chr1 (209-252)||(33487130-33487173)
[»] scaffold0011 (1 HSPs)
scaffold0011 (178-274)||(10976-11072)
[»] scaffold1294 (1 HSPs)
scaffold1294 (178-277)||(737-836)
[»] scaffold0012 (1 HSPs)
scaffold0012 (152-266)||(244565-244681)
[»] scaffold0665 (1 HSPs)
scaffold0665 (154-253)||(1174-1272)
[»] scaffold0009 (1 HSPs)
scaffold0009 (178-266)||(105009-105097)
[»] scaffold0340 (1 HSPs)
scaffold0340 (203-277)||(11835-11909)
[»] scaffold0316 (1 HSPs)
scaffold0316 (182-277)||(12261-12347)
[»] scaffold0722 (1 HSPs)
scaffold0722 (218-277)||(5584-5643)
[»] scaffold0112 (1 HSPs)
scaffold0112 (188-254)||(25595-25661)
[»] scaffold0150 (1 HSPs)
scaffold0150 (226-277)||(10383-10434)
[»] scaffold0018 (1 HSPs)
scaffold0018 (177-282)||(137111-137217)
[»] scaffold0157 (1 HSPs)
scaffold0157 (196-277)||(1199-1279)
[»] scaffold0536 (1 HSPs)
scaffold0536 (209-252)||(2878-2921)
[»] scaffold0312 (1 HSPs)
scaffold0312 (209-252)||(6115-6158)
[»] scaffold0024 (1 HSPs)
scaffold0024 (233-277)||(36541-36585)


Alignment Details
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 24470326 - 24470451
Alignment:
Q  152 cttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccct 251  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  24470326 cttttctctcctatgagccgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttaggggcaatttttgacccaaaatcacccct 24470425  T
Q  252 ctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||    
T  24470426 ctaactcgtttttctatttccctttt 24470451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 24475274 - 24475399
Alignment:
Q  152 cttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccct 251  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  24475274 cttttctctcctatgagccgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttaggggcaatttttgacccaaaatcacccct 24475373  T
Q  252 ctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||    
T  24475374 ctaactcgtttttctatttccctttt 24475399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 8611803 - 8611680
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||||    
T  8611803 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccacgaaagaggggtgatttagggtctctttttgacccaatatcacccctct 8611704  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||    
T  8611703 aactcgtttttctatttccctttt 8611680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 49166860 - 49166983
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  49166860 tttctctcctgtgagccgtcacacaaaccctagtttcttctccttcatccaccaaagatgggtgatttagggtcaatttttgacctaaaatcacccctct 49166959  T
Q  254 aactcgtttttctatttccctttt 277  Q
    |||| |||||||||||||||||||    
T  49166960 aacttgtttttctatttccctttt 49166983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 47749671 - 47749790
Alignment:
Q  158 tctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaact 257  Q
    ||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||    
T  47749671 tctcctgtgagccgtcacgaaaaccctaatttcttctccttcatccaccaaagaggggtgatttatggtcaatttttgacccaaaatcacccctctatct 47749770  T
Q  258 cgtttttctatttccctttt 277  Q
    ||||||||| ||||||||||    
T  47749771 cgtttttctctttccctttt 47749790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 40775200 - 40775323
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| |    
T  40775200 tttctctcttgtgagtcgtcaccaaaaccctaatttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgatccaaaatcacccctat 40775299  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||  ||||||||||    
T  40775300 aactcgtttttccttttccctttt 40775323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 28015313 - 28015413
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg-tttttctatttcccttt 276  Q
    |||||||| ||| ||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||| | |||||||||||||||||    
T  28015313 aaaccctaattttttcaccttcatccactaaagaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttttctatttcccttt 28015412  T
Q  277 t 277  Q
    |    
T  28015413 t 28015413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 25855381 - 25855278
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtg----atttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccc 273  Q
    ||||| |||||| |||||||||||||||||||||||||||    |||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  25855381 aaaccttagttttttctccttcatccaccaaagaggggtgggtgatttagggtcaatttttgatccaaaatcatccctctaactcgtttttctctttccc 25855282  T
Q  274 tttt 277  Q
    ||||    
T  25855281 tttt 25855278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 8319270 - 8319357
Alignment:
Q  178 aaaccctagttt-cttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| |||||| ||||||||||||||||||| | ||||||||||||    
T  8319270 aaaccctagttttcttctcctttatccaccaaagaggagtgatttatggtcaacttttgacccaaaatcacccatgtaactcgttttt 8319357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 29804823 - 29804736
Alignment:
Q  188 ttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||  |||||||    
T  29804823 ttcttttcattcatccaccaaagaggggtggtttagggtcaatttttgaccccaaatcacccctctaaatcgtttttctccttccctt 29804736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 35141930 - 35141824
Alignment:
Q  158 tctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaact 257  Q
    |||| |||||| ||||||  ||| | |||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||    
T  35141930 tctcttgtgagccgtcaccaaaatcatagtttattctccttcattcaccaaagaagggtgatttagggtcaatttttgaccaaaaatcacccttctaact 35141831  T
Q  258 cgttttt 264  Q
    | |||||    
T  35141830 cattttt 35141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 5025214 - 5025113
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa-attttgacccaaaatcacccctctaac-tcgtttttctatttccctt 275  Q
    ||||||||||||||||  |||||||||||| ||||||||||||| | |||||  |||||||||||||||||||||||||| |  ||||||||||||||||    
T  5025214 aaaccctagtttcttcatcttcatccaccagagaggggtgattttgagtcaattttttgacccaaaatcacccctctaacttattttttctatttccctt 5025115  T
Q  276 tt 277  Q
    ||    
T  5025114 tt 5025113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 271
Target Start/End: Complemental strand, 23732574 - 23732457
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||||||  |||||||  |||||| || ||||||||||||||||| |||||| ||||||| |||||||||  ||||    
T  23732574 tttctctcttgtgagccgtcaccaaaaccctcatttcttcaacttcattcatcaaagaggggtgatttaaggtcaatttttgactcaaaatcacttctct 23732475  T
Q  254 aactcgtttttctatttc 271  Q
    ||||||||||||| ||||    
T  23732474 aactcgtttttctctttc 23732457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 33530646 - 33530532
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||| | ||||  ||||| ||||||||| | ||||||| | ||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  33530646 ttctctcttgtgagccatcaccaaaaccatagtttcttttacttcatctatcaaagaggggtgatttagggtcaa--tttgacccaaaaccacccctcta 33530549  T
Q  255 actcgtttttctatttc 271  Q
    || ||||||||| ||||    
T  33530548 acccgtttttctttttc 33530532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 37399551 - 37399682
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa----------attttgacccaaaatc 245  Q
    |||||| |||||| |||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||| ||           |||| ||| ||||||    
T  37399551 tctctcttgtgagccgtcacgcaaaccctaatttcttcttcttcatccaccaaagacgggtgatttagggttaattttttttttttttttacctaaaatc 37399650  T
Q  246 acccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||| ||||||||||    
T  37399651 acccctctaactcgtttttctctttccctttt 37399682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 30992948 - 30992881
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  30992948 gaggggtgatttaaggttaatttttgacccaaaatcacccctctaacttgtttttctatttccctttt 30992881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 21329448 - 21329368
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttt 263  Q
    |||| ||||||||| || |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||    
T  21329448 cctaatttcttctcatttatccaccaaagaggggtggtttagggtcaatttttgaccc-aaatcacccctctaaatcgtttt 21329368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 23177752 - 23177640
Alignment:
Q  165 tgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa-attttgacccaaaatcacccctctaactcgtttt 263  Q
    |||| ||||||| |||| ||||||||||||||||||||||  ||||| | |||||||| ||||||  |||| |||||||||||| ||||||||| |||||    
T  23177752 tgagacgtcacaaaaactctagtttcttctccttcatccattaaagatgagtgatttaaggtcaatttttttacccaaaatcactcctctaactagtttt 23177653  T
Q  264 tctatttcccttt 276  Q
    ||| ||| |||||    
T  23177652 tctcttttccttt 23177640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 43807271 - 43807208
Alignment:
Q  214 ggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||| |||||    
T  43807271 ggtgatttatggtcaatttttgacccaaaatcacctctctaactcgtttttctatttctctttt 43807208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 38649524 - 38649438
Alignment:
Q  169 tcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaa 255  Q
    |||||||  ||| |||| ||||||| |||||||| || ||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  38649524 tcgtcaccaaaatcctaatttcttcaccttcatcaactaaaaaggggtgatttagagtcaatttttgacccaaaatcacccctctaa 38649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 275
Target Start/End: Original strand, 7985822 - 7985946
Alignment:
Q  152 cttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagagggg-tgatttagggtcaaattttgacccaaaatcacccc 250  Q
    ||||| ||||||||||| |||||   |||| |||||||||||||||| ||     || |||||| |||||||||||||| |||||||| |||| || |||    
T  7985822 cttttatctcctgtgagccgtcatcgaaactctagtttcttctcctttatttgttaaggagggggtgatttagggtcaacttttgacctaaaaccatccc 7985921  T
Q  251 tctaactcgtttttctatttccctt 275  Q
    |||||||||||||||| ||||||||    
T  7985922 tctaactcgtttttctctttccctt 7985946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 14734207 - 14734120
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttc 265  Q
    |||| ||| ||| |||| ||||||||| |||||| ||||| ||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  14734207 aaactctaattttttcttcttcatccatcaaagaagggtggtttagggtcaatttttgaccccaaatcacccctctaaaacgtttttc 14734120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 35135364 - 35135241
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| ||| ||| |||||  ||||||||| || |||||||||||||| | |||||| ||||||||| ||||| |||||||| |||||| | | |||    
T  35135364 tttctctcttgtaagttgtcaccaaaaccctagattattctccttcatccatctaagaggagtgatttagagtcaatttttgacctaaaatcgctcttct 35135265  T
Q  254 aactcgtttttctatttccctttt 277  Q
    | ||||||||| | ||||| ||||    
T  35135264 agctcgtttttatctttccttttt 35135241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 42490713 - 42490758
Alignment:
Q  232 tttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  42490713 tttgacccaaaatcacccctctaactcgtttttctttttccctttt 42490758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 5237914 - 5237977
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaa 255  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  5237914 ttcttcttgatccaccaaagaggggtgatttagggtcaaa-tttgactcaaaatcacccttctaa 5237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 10250662 - 10250539
Alignment:
Q  153 ttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    ||||||||| ||| || ||||||  ||||| || ||| |||| |||||||||| ||| |||| ||||  |||||||| ||| || |||||||||||||||    
T  10250662 ttttctctcttgttagccgtcaccaaaaccttaatttattcttcttcatccactaaaaaggg-tgataaagggtcaattttcgatccaaaatcacccctc 10250564  T
Q  253 taactcgtttttctatttccctttt 277  Q
    ||| ||||||||||| |||| ||||    
T  10250563 taattcgtttttctaattccttttt 10250539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 16263372 - 16263444
Alignment:
Q  206 caaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt-ctatttccctttt 277  Q
    ||||||||||||||||||| |||| |||||| ||||||||||| |||||||| |||||| ||||||| |||||    
T  16263372 caaagaggggtgatttaggatcaatttttgatccaaaatcacctctctaacttgtttttcctatttctctttt 16263444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 24045367 - 24045295
Alignment:
Q  200 atccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcc 272  Q
    ||||| ||||||| ||||||||| |||||| ||||||||||||||||||| |||||| | ||||||| |||||    
T  24045367 atccatcaaagagtggtgatttaaggtcaatttttgacccaaaatcacccgtctaacacatttttctctttcc 24045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 34595807 - 34595719
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||| |||||| | |||||||||||||||||| ||| ||||||||||| ||| ||| | |||||||| |||||  ||||||||||    
T  34595807 aaaccctaatttctttttcttcatccaccaaagaggagtggtttagggtcaattttcgactctaaatcaccactctacatcgtttttct 34595719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 44681454 - 44681517
Alignment:
Q  213 gggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||||    
T  44681454 gggtgatttaggttcaatttttgacctaaaatcaccc-tctaactcgtttttctttttccctttt 44681517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 26017777 - 26017716
Alignment:
Q  216 tgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||| ||| || |||||||| |||||||||||||||| |||||||| ||||||||||||    
T  26017777 tgatttatggttaatttttgacctaaaatcacccctctaattcgtttttttatttccctttt 26017716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 29805035 - 29804976
Alignment:
Q  188 ttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcac 247  Q
    ||||| || |||| |||||||||||||||| ||||||||||| ||||||||| |||||||    
T  29805035 ttcttttcattcaaccaccaaagaggggtggtttagggtcaatttttgaccccaaatcac 29804976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 35661494 - 35661580
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||| |||||||||||||||         | |||||||| |||||||  ||||||||||||||||  ||||||||||    
T  35661494 cctagtttcttctccttcatccatcaaagaggggtgatt---------aatttgaccctaaatcactactctaactcgtttttccttttccctttt 35661580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 46918358 - 46918456
Alignment:
Q  177 caaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttt 276  Q
    |||| |||||||| ||||  ||||| || ||||||||  |||||||| ||||| |||||||||| |||| ||||| ||||||| |||||| |||||||||    
T  46918358 caaaacctagtttattcttgttcattcatcaaagaggtatgatttagagtcaatttttgacccataatcgcccctttaactcg-ttttctctttcccttt 46918456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 47156359 - 47156437
Alignment:
Q  183 ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||||||||||||||||   | || || |||||||||| |||||| |||||| ||||||||| |||||||||||||||    
T  47156359 ctagtttcttctccttcatttgctaagga-gggtgatttaaggtcaatttttgatccaaaatcatccctctaactcgttt 47156437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 41748653 - 41748572
Alignment:
Q  183 ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||||||||||  |||||| ||| ||||||  |||||||| |||||| |||||| |||||||||| ||||||| | ||||||    
T  41748653 ctagtttcttcatcttcattcactaaagagatgtgatttacggtcaatttttgatccaaaatcactcctctaaattgttttt 41748572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 43483557 - 43483637
Alignment:
Q  183 ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    ||||||||| |  |||||||||| || |||| ||||||||||||||| |||||| | ||||||| |||||||||| ||||||    
T  43483557 ctagtttctgcatcttcatccactaa-gaggagtgatttagggtcaatttttgatctaaaatcatccctctaacttgttttt 43483637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 135282 - 135230
Alignment:
Q  158 tctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaag 210  Q
    ||||||||||| |||||   ||||||||||||||||||||||||||| |||||    
T  135282 tctcctgtgagccgtcatcaaaaccctagtttcttctccttcatccatcaaag 135230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 11001794 - 11001857
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtga 218  Q
    |||||||| |||||||||||||| ||| |||| ||| |||| |||||||||||||||| ||||||    
T  11001794 tttctctcttgtgagtcgtcaca-aaatcctaattttttcttcttcatccaccaaagaagggtga 11001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 24988497 - 24988455
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  24988497 agaggggtgattcagggtcaa-ttttgacccaaaatcacccctc 24988455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 21954969 - 21954924
Alignment:
Q  201 tccaccaaagaggggtgatttagggtcaaattttgacccaaaatcac 247  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  21954969 tccaccaaagaagggtgatttagggtc-aattttaacccaaaatcac 21954924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 277
Target Start/End: Original strand, 22751429 - 22751495
Alignment:
Q  211 aggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| |||||| || |||| ||||||   |||||||||| ||||||||||||| |||||||||||||    
T  22751429 agggatgattttggatcaatttttgagataaaatcacccttctaactcgttttactatttccctttt 22751495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 9933866 - 9933903
Alignment:
Q  240 aaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||| || ||||||||||||||||    
T  9933866 aaaatcacccctctaactagtatttctatttccctttt 9933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 39090127 - 39090172
Alignment:
Q  233 ttgacccaaaatcacccctctaactcg-tttttctatttccctttt 277  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||    
T  39090127 ttgatccaaaatcacctctctaactcgttttttctatttccctttt 39090172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 21603441 - 21603484
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||    
T  21603441 agaggggtgatttagggtc-aattttgaccaaaaagcacccctct 21603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 3e-54; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 50519723 - 50519846
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  50519723 tttctctcttgtgagccgtcacacaaaccctagtttcttctccttcatccaccaaagatgggtgatttagggtcaatttttgacccaaaatcacccctct 50519822  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||    
T  50519823 aactcgtttttctatttccctttt 50519846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 22286930 - 22286807
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  22286930 tttctctcctgtgagccgtcacacaagccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacctaaaattacccctct 22286831  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||||||| ||||||    
T  22286830 aactcgtttttctattttcctttt 22286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 20201239 - 20201116
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20201239 tttctctcttgtgagccgtcacgaaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaatcacccctct 20201140  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||| |||| |||||    
T  20201139 aactcgtttttctctttcactttt 20201116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 20203421 - 20203298
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20203421 tttctctcttgtgagccgtcacgaaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaatcacccctct 20203322  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||| |||| |||||    
T  20203321 aactcgtttttctctttcactttt 20203298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 41882589 - 41882468
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  41882589 tttctctcctgtgagccgttacacaagccctagtttcttctccttcatccatcaaagaggagtgatttagggtcaatttttgacccaaaattacccctct 41882490  T
Q  254 aactcgtttttctatttccctt 275  Q
    ||||||||||||||||||||||    
T  41882489 aactcgtttttctatttccctt 41882468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 1165576 - 1165454
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||  ||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1165576 ttctctctagtgagccgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctcta 1165477  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| |||||||| ||||||||||    
T  1165476 acttgtttttctttttccctttt 1165454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 156 - 277
Target Start/End: Complemental strand, 35501937 - 35501817
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaa 255  Q
    |||||| |||||| ||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  35501937 tctctcttgtgagccgtcaccgaaatcctagtttcttctccttcatccaccaaagaggg-tgatttagggttaatttttgacccaaaatcacccctctaa 35501839  T
Q  256 ctcgtttttctatttccctttt 277  Q
    ||||||||||| ||||||||||    
T  35501838 ctcgtttttctctttccctttt 35501817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 21803463 - 21803586
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  ||||||||||||||||||||||||| |||||||||| |||||| || ||||| |||||||||||||||||||||||    
T  21803463 tttctctcttgtgagccgtcaccaaaaccctagtttcttctccttcatctaccaaagaggagtgattcagtgtcaatttttgacccaaaatcacccctct 21803562  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||| |||| |||||    
T  21803563 aactcgtttttctctttctctttt 21803586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 40462152 - 40462053
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  40462152 aaaccctagtttcttctctttcatccaccaaagagtggtgatttagagtcaaattttgacccaaaatcacccctctaacttgtttttctctttccctttt 40462053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 43029617 - 43029739
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||  ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  43029617 ttctctctagtgagtcgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttaggatcattttttgacccaaaatcacccctcta 43029716  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| |||||||  ||||||||||    
T  43029717 acttgtttttccttttccctttt 43029739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 156 - 276
Target Start/End: Original strand, 20251586 - 20251707
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtc-aaattttgacccaaaatcacccctcta 254  Q
    |||||| |||||| ||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||| ||||    
T  20251586 tctctcttgtgagccgtcaccgaaaccctagtttattctccttcatccaccaaagaggggtgatttagggtcgatttttttacccaaaatcacccttcta 20251685  T
Q  255 actcgtttttctatttcccttt 276  Q
    |||||||||||| |||||||||    
T  20251686 actcgtttttctctttcccttt 20251707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 42106068 - 42106168
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaa-ctcgtttttctatttcccttt 276  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| ||  |||||||||||||||||    
T  42106068 aaaccctagtttcttcatcttcatccaccaaagaggggtgatttagggtcaatttttgacctaaaatcacccatctaacctgttttttctatttcccttt 42106167  T
Q  277 t 277  Q
    |    
T  42106168 t 42106168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 278
Target Start/End: Complemental strand, 1220372 - 1220272
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||| |||||||||||||| | | ||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||| ||||||||||    
T  1220372 aaactctaatttcttctccttcacctatcaaagaggggtgatttaggatcaatttttgattcaaaatcacccctctaactcgtttttctctttccctttt 1220273  T
Q  278 g 278  Q
    |    
T  1220272 g 1220272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 45664217 - 45664285
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45664217 agaggggtgatttaggatcaaattttgacccaaaatcacccctctaactcgtttttctatttctctttt 45664285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 22844008 - 22844091
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtt 261  Q
    |||||||||||| ||||||||||| || ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  22844008 aaaccctagtttattctccttcattcatcaaagagggctgatttaaggtcaatttttgacccaaaatcacccctctaactcgtt 22844091  T

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Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 25374241 - 25374128
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||| ||||||  |||| |||||||||| |||||||| ||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||||    
T  25374241 tgtgagccgtcactaaaactctagtttcttttccttcattcac-aaagaagggtgatttagggttaatttttgacctaaaatcacccctctaactcgttt 25374143  T
Q  263 ttctatttccctttt 277  Q
    |||| ||| ||||||    
T  25374142 ttctcttttcctttt 25374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 37051581 - 37051678
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    |||| ||| ||||||||| |||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||| ||||||||||  |||||||    
T  37051581 aaactctaatttcttctctttcatccaccaaagagggatgatttagggtcaatttttgaccctgaatcacccctctaaatcgtttttctccttccctt 37051678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 1806617 - 1806529
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||| || ||||| |||||||||||||||||||||| ||||||||||| |||||| || ||||||||||||||| ||||||||||    
T  1806617 aaaccctacttccttcttcttcatccaccaaagaggggtggtttagggtcaatttttgatcccaaatcacccctctaaatcgtttttct 1806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 40796990 - 40797089
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg-tttttctatttcccttt 276  Q
    ||||||||||||||||  |||| ||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||| | |||||||||||||||||    
T  40796990 aaaccctagtttcttcatcttcctccaccaaaaaggggtgatttagggt-taattttgagccaaaatcacccctctaacttgttttttctatttcccttt 40797088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 43242743 - 43242867
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagttt-cttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||||||| |||||| ||||||| ||| |||||||| |||||||||||| || |||| | ||||||||||||||||  ||||||| ||||||||||| |     
T  43242743 tttctctcttgtgagccgtcacataaatcctagttttcttctccttcattcatcaaataagggtgatttagggtcagtttttgacacaaaatcacccatt 43242842  T
Q  253 taactcgtttttctatttccctttt 277  Q
    |||||||||||||| | ||||||||    
T  43242843 taactcgtttttctctgtccctttt 43242867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 43839673 - 43839576
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||| ||||| ||| |||||||||||| |||||| ||||||||||    
T  43839673 aaaccctagtttcttctccttcattcactaaagatgggtgatttagggtcaatttttga-ccaaagtca-ccctctaactcgcttttctctttccctttt 43839576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 53426761 - 53426854
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttc 271  Q
    |||| |||||||||| || |||||||| |||||| || |||||||||||||| |||| || |||||||||||||||||||||||||||| ||||    
T  53426761 aaactctagtttcttttctttcatccatcaaagatggatgatttagggtcaattttttacgcaaaatcacccctctaactcgtttttctctttc 53426854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 913488 - 913374
Alignment:
Q  165 tgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg--ttt 262  Q
    |||| ||||||  ||||| ||||||||||  ||||||||||||||||||||| ||| |  ||||| ||||||||||||||||||||||||||  |  |||    
T  913488 tgagccgtcaccaaaaccttagtttcttcatcttcatccaccaaagaggggtaattcatagtcaatttttgacccaaaatcacccctctaacatgttttt 913389  T
Q  263 ttctatttccctttt 277  Q
    |||||||||||||||    
T  913388 ttctatttccctttt 913374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 11846572 - 11846671
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||| |||||||||||||||| |||||| ||||| |||||| || |||||| | |||||||||| ||||||| |||||||| ||||| ||||    
T  11846572 aaaccctagttttttctccttcatccacctaagaggagtgatatagggttaatttttgagcgaaaatcacccgtctaacttgtttttctctttccatttt 11846671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 47914755 - 47914689
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa 229  Q
    |||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  47914755 tgtgagccgtcacagaaatcctaatttcttctccttcatccaccaaagaggggtgatttagggtcaa 47914689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 29776857 - 29776747
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||  ||||||  ||||| |||||| ||||||||||||||||||||||||||||||||||||            |||||||||||||||    
T  29776857 tttctctcttgtgaaccgtcactaaaaccttagttttttctccttcatccaccaaagaggggtgatttagggt------------caaaatcacccctct 29776770  T
Q  254 aactcgtttttctatttcccttt 276  Q
    ||||||||||||| |||||||||    
T  29776769 aactcgtttttctctttcccttt 29776747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 33978101 - 33977980
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||| || |||||| ||||||| |||  ||||||||| ||||||||||||| ||| |  ||||||||| |||||| ||||||||||||||   |||| |    
T  33978101 tttctttcttgtgagccgtcacaaaaattctagtttctcctccttcatccacaaaaaaatggtgatttaaggtcaatttttgacccaaaat---cccttt 33978005  T
Q  254 aactcg-tttttctatttccctttt 277  Q
    |||||| ||||||||||||||||||    
T  33978004 aactcgttttttctatttccctttt 33977980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 2598045 - 2598126
Alignment:
Q  183 ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    ||||||||||  ||||||||||||||| || |||||||||  ||| | ||||||||||||||||| ||||||||||||||||    
T  2598045 ctagtttctttgccttcatccaccaaaaagaggtgatttaaagtcgatttttgacccaaaatcactcctctaactcgttttt 2598126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 4019587 - 4019651
Alignment:
Q  206 caaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttc 271  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||    
T  4019587 caaagaggggtgatttagggtcaa-ttttgactcaaaatcacctctctaactcgtttttctctttc 4019651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 27831057 - 27831147
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaact 257  Q
    |||||| ||||||  |||||||| ||||||||   |||||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||||    
T  27831057 tgtgagccgtcaccgaaaccctaatttcttct---tcatccaccaaagaggggtgatttggggtc-aattttgacctaaaatcacccatctaact 27831147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 34766938 - 34767035
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| |||||||| ||| |||||| || | |||| |||||||||||||| || | ||||||||||||||||| |||||||||||||||| ||||||||||    
T  34766938 aaactctagtttcatcttcttcattcatcgaagatgggtgatttagggttaa-tattgacccaaaatcaccc-tctaactcgtttttctctttccctttt 34767035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 33076272 - 33076368
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgat------ttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||| |||||||||||||||||      ||||||| || |||||| ||||||||||||||||||||| |||| || ||| ||||||    
T  33076272 tttcttctccttcattcaccaaagaggggtgattttgatttagggttaacttttgatccaaaatcacccctctaactcattttcctcttttcctttt 33076368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 14741486 - 14741383
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||| ||||||| |||||||||||| |||||||||||||| |||||| | |||||||           || ||||||||||||| |||||||||||||    
T  14741486 tgtgagccgtcacataaaccctagttttttctccttcatccatcaaagatgagtgattt-----------ttaacccaaaatcacctctctaactcgttt 14741398  T
Q  263 ttctatttccctttt 277  Q
    |||| ||||||||||    
T  14741397 ttctctttccctttt 14741383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 36540809 - 36540730
Alignment:
Q  197 ttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||| | ||| |||||||  |||||||||||| ||| || ||||||||| |||||||||||||||||    
T  36540809 ttcatccaccaaagagggttaattgagggtcagtttttgacccaaagtcaaccttctaactcg-ttttctatttccctttt 36540730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 21086097 - 21086013
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||| |||||||||||||||| |||||| |||||||||| |||| ||||||| | ||||||  | |||||| |||||| ||||||    
T  21086097 aaactctagtttcttctcctttatccactaaagaggggtaattttgggtcaattcttgacctcatatcacctctctaaatcgttt 21086013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 3088763 - 3088720
Alignment:
Q  234 tgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||| |||||||||||||| ||||||    
T  3088763 tgacccaaaatcacccctctaattcgtttttctattttcctttt 3088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 27056063 - 27056000
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggt 226  Q
    |||||| ||||||  |||||||| ||| ||||||||||||||||| ||| ||||||||||||||    
T  27056063 tgtgagccgtcaccaaaaccctaattttttctccttcatccaccagagaagggtgatttagggt 27056000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 28995473 - 28995418
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaag 210  Q
    |||||||  |||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  28995473 tttctcttttgtgagccgtcaca-aaactctagtttcttctccttcatccaccaaag 28995418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 7656592 - 7656535
Alignment:
Q  218 atttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||| ||||| ||||    
T  7656592 atttagggtcaatttttgacccaaa-tcaccc-tctaactcgtttttctctttccttttt 7656535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 277
Target Start/End: Complemental strand, 29182705 - 29182666
Alignment:
Q  238 ccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  29182705 ccaaaatcatccctctaactcgtttttctctttccctttt 29182666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 33070152 - 33070199
Alignment:
Q  219 tttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  33070152 tttagggtcaatttttaaccccaaatcacccctctaaatcgtttttct 33070199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 25939598 - 25939564
Alignment:
Q  213 gggtgatttagggtcaaattttgacccaaaatcac 247  Q
    ||||||||||||||||| |||||||||||||||||    
T  25939598 gggtgatttagggtcaatttttgacccaaaatcac 25939564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 26412296 - 26412388
Alignment:
Q  184 tagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||| |  | ||||||||||  ||||||||| ||  ||||||||| |||||||||  |||||| |||||||||| | ||||||||    
T  26412296 tagtttcttctccgttgttcaccaaagagatgtgatttagtgt-taattttgactcaaaatcacatctctaagtcgtttttctctctccctttt 26412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 37451698 - 37451754
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacc 248  Q
    |||||| | ||| ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  37451698 ttctccgtgatctaccaaagaggggtaatttagggtc-aattttgacccgaaatcacc 37451754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 45664261 - 45664216
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||||||||| |||||||| ||||| || ||||||||||||||    
T  45664261 agaggggtgattttgggtcaaaatttgatcctaaatcacccctcta 45664216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 1165478 - 1165522
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  1165478 agaggggtgattttgggtcaaaaattgaccctaaatcacccctct 1165522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 11819061 - 11819104
Alignment:
Q  209 agaggggtgatttagggtcaaattttgaccc-aaaatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  11819061 agaggggtgatttagggtc-aattttgacccaaaaatcacccctc 11819104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 20201140 - 20201184
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  20201140 agaggggtgattttgggtcaaaaattgaccctaaatcacccctct 20201184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 20203322 - 20203366
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  20203322 agaggggtgattttgggtcaaaaattgaccctaaatcacccctct 20203366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 30156432 - 30156389
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  30156432 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 30156389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 36691950 - 36691907
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  36691950 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 36691907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 25516427 - 25516550
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25516427 tttctctcctgtgagccgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatatttgacccaaaatcacccctct 25516526  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||| ||||||||||||||||||    
T  25516527 aactcatttttctatttccctttt 25516550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 41176795 - 41176919
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||    
T  41176795 tttctctcctgtgagccgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaaccacccatct 41176894  T
Q  254 aactcg-tttttctatttccctttt 277  Q
    |||||| |||||||||||| |||||    
T  41176895 aactcgttttttctatttctctttt 41176919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 43566810 - 43566931
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||    
T  43566810 tttctctcctgtgagccgtcacacaaaccatagtttcttctccttcatccaccaaagaggggtga-ttagggtcaatttttgacccaaaatca-ccctct 43566907  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||| ||||    
T  43566908 aactcgtttttctatttccttttt 43566931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 27191495 - 27191393
Alignment:
Q  175 cacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccct 274  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  27191495 cacaaaccctagtttcttctccttcatccaccaaagagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccct 27191396  T
Q  275 ttt 277  Q
    |||    
T  27191395 ttt 27191393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 27841309 - 27841207
Alignment:
Q  175 cacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccct 274  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  27841309 cacaaaccctagtttcttctccttcatccaccaaagagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccct 27841210  T
Q  275 ttt 277  Q
    |||    
T  27841209 ttt 27841207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 44167886 - 44167768
Alignment:
Q  158 tctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaact 257  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||    
T  44167886 tctcttgtgagccgtcacacaagccctagtttcttctccttcatccaccaaagaggggtgatatatggtcaatttttgacccaaaatcacccctctaact 44167787  T
Q  258 cgtttttctatttcccttt 276  Q
    ||||||||||||| |||||    
T  44167786 cgtttttctattttccttt 44167768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 25771379 - 25771501
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||  ||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25771379 ttctctctagtgagccgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctcta 25771478  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| |||||||  ||||||||||    
T  25771479 acttgtttttccttttccctttt 25771501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 40125323 - 40125445
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||| |||||   ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  40125323 ttctctcttgtgagccgtcatcaaaaccttagtttcttctccttcatccaccaaagaggggtgatttagggttaatttttgacccaaaatcacccctcta 40125422  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| ||||||||||||| |||||    
T  40125423 acttgtttttctatttctctttt 40125445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 164 - 277
Target Start/End: Original strand, 3464902 - 3465015
Alignment:
Q  164 gtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttt 263  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||||||    
T  3464902 gtgagccgtcacacaaactctaatttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgatccaaaatcaccacactaactcgtttt 3465001  T
Q  264 tctatttccctttt 277  Q
    ||||||| ||||||    
T  3465002 tctattttcctttt 3465015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 6089844 - 6089949
Alignment:
Q  172 tcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttc 271  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  6089844 tcacaaaaaccctaatttcttctccttcatccatcaaagaggggtgatttaaggtcaatttttgacccaaaatcacccctctaattcgtttttctatttc 6089943  T
Q  272 cctttt 277  Q
    ||||||    
T  6089944 cctttt 6089949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 165 - 277
Target Start/End: Original strand, 3390376 - 3390488
Alignment:
Q  165 tgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  3390376 tgagccgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgttttt 3390475  T
Q  265 ctatttccctttt 277  Q
    |  ||||||||||    
T  3390476 ccttttccctttt 3390488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 42105917 - 42105810
Alignment:
Q  170 cgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatt 269  Q
    ||||||| |||||||| ||| || |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  42105917 cgtcacaaaaaccctaatttattttccttcatccaccaaagaggggtgctttagggtcaatttttgacccaaaatcaccactctaactcgtttttctatt 42105818  T
Q  270 tccctttt 277  Q
    ||||||||    
T  42105817 tccctttt 42105810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 27024319 - 27024197
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||  ||||||||||||  |||| |||||||||||||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  27024319 ttctctctagtgagtcgtcaccaaaactctagtttcttctccttcatccatcaaagatgggtgatttagggtcattttttgacccaaaatcacccctcta 27024220  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| |||||||  ||||||||||    
T  27024219 acttgtttttccttttccctttt 27024197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 37883587 - 37883709
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||| ||||||  ||| | || ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  37883587 ttctctcttgtgagccgtcactaaaatcataatttcttctccttcatccaccaaagaggggtgatttagggtcaatttttaatccaaaatcacccctcta 37883686  T
Q  255 actcgtttttctatttccctttt 277  Q
    | |||||||||||||||| ||||    
T  37883687 attcgtttttctatttccttttt 37883709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 3602918 - 3603041
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  ||| ||||||||||||||||||||||| |||||| |||||||||| |||||| ||||||| |||||||||||||||    
T  3602918 tttctctcttgtgagccgtcaccaaaatcctagtttcttctccttcatccatcaaagatgggtgatttatggtcaacttttgactcaaaatcacccctct 3603017  T
Q  254 aactcgtttttctatttccctttt 277  Q
    |||| |||||||| ||| ||||||    
T  3603018 aacttgtttttctcttttcctttt 3603041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 36507868 - 36507987
Alignment:
Q  158 tctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaact 257  Q
    |||||| ||||  ||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||| |||| |||    
T  36507868 tctcctttgagctgtcacacaagccctagtttcttctccttcatccaccaaagaatggtgacttagggtcaatttttgacccaaaatcacctctctgact 36507967  T
Q  258 cgtttttctatttccctttt 277  Q
    | ||||||||||| ||||||    
T  36507968 catttttctattttcctttt 36507987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 277
Target Start/End: Original strand, 5930369 - 5930479
Alignment:
Q  167 agtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||||  ||| |||| | |||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  5930369 agtcgtcaccaaaatcctaatatcttctccttcatccaccaaagagaggtgatttagggttaatttttgacccaaaatcatccctctaactcgtttttct 5930468  T
Q  267 atttccctttt 277  Q
     ||||||||||    
T  5930469 gtttccctttt 5930479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 10588999 - 10589095
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg-tttttctatttccctttt 277  Q
    ||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  10588999 cctagtttcttcatcttcatccaccaaaaaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgttttttctatttccctttt 10589095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 26491261 - 26491359
Alignment:
Q  179 aaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||| | |||| ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  26491261 aaccttagtttcttctccatcatccaccaaagaggggtaatttaagttcaatttttgacccaaaatcacccctttaactcatttttctatttccctttt 26491359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 7640481 - 7640414
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7640481 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttccctttt 7640414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 25623225 - 25623103
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||||||||| || |||  ||||||||||||||| | |||||| || |||||||||||||||||   |||| ||||||||||||||||||| | ||    
T  25623225 ttctctcctgtgagccgccaccaaaaccctagtttctttttcttcatacatcaaagaggggtgatttattatcaatttttgacccaaaatcacccatata 25623126  T
Q  255 actcgtttttctatttccctttt 277  Q
    |||||||||||| ||||||||||    
T  25623125 actcgtttttctctttccctttt 25623103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 19581160 - 19581060
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgt-ttttctatttcccttt 276  Q
    ||||| |||||| ||| ||||||||||| ||||||||||||||| ||||||| |||| || |||||||||||||||||||||| |||| |||||||||||    
T  19581160 aaaccttagttttttcaccttcatccactaaagaggggtgattttgggtcaatttttaacacaaaatcacccctctaactcgttttttttatttcccttt 19581061  T
Q  277 t 277  Q
    |    
T  19581060 t 19581060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 41841906 - 41842006
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgaccc-aaaatcacccctctaactcgtttttctatttcccttt 276  Q
    |||| ||||||| |||||||||||||| || |||||| ||||||| |||||| ||||||||| |||||||||||| |||||||||||||| |||||||||    
T  41841906 aaactctagttttttctccttcatccatcatagagggttgatttatggtcaatttttgacccaaaaatcacccctttaactcgtttttctctttcccttt 41842005  T
Q  277 t 277  Q
    |    
T  41842006 t 41842006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 29812755 - 29812673
Alignment:
Q  195 ccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||||| ||| ||||||    
T  29812755 ccttcatccatcaaagagaggtgatttagggtcaatttttgacacaaaatcacccctctaactcatttttctctttacctttt 29812673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 278
Target Start/End: Complemental strand, 25237483 - 25237383
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||| |||||||||||| |  ||||||||||||||||| ||||| |||||| ||||||||||| ||| |||| |||||||  ||||||||||    
T  25237483 aaactctagtttattctccttcatctattaaagaggggtgatttagagtcaacttttgatccaaaatcacctctcgaacttgtttttccctttccctttt 25237384  T
Q  278 g 278  Q
    |    
T  25237383 g 25237383  T

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Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 44951463 - 44951510
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44951463 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa 44951510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 15674102 - 15674045
Alignment:
Q  207 aaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  15674102 aaagaggggtgatttagggtcaatttttgacccaaaatcactcctctaacttgttttt 15674045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 2251501 - 2251405
Alignment:
Q  179 aaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    ||||||| |||  ||| |||||||||  ||||||||||| ||| ||||||||||||||||| ||||||| ||||||| ||||||||||  |||||||    
T  2251501 aaccctaattttatcttcttcatccattaaagaggggtggttttgggtcaaattttgaccccaaatcactcctctaaatcgtttttctccttccctt 2251405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 9715700 - 9715616
Alignment:
Q  180 accctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||||||||| ||||| |||||||| |||| | ||||||||||||||||| |||||| ||||||||| | ||| |||||||||||    
T  9715700 accctagttttttctctttcatccatcaaaaatgggtgatttagggtcaatttttgatccaaaatcatctctccaactcgttttt 9715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 34479913 - 34480012
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||||||||| |||||||| |||||| || |||| ||||||||| |||| |||||||||||||| | |||| |  |||||| ||||||||||    
T  34479913 aaactctagtttcttctcattcatccatcaaagatggatgatatagggtcaattttttacccaaaatcacccttataacacaattttctctttccctttt 34480012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 16880087 - 16880029
Alignment:
Q  207 aaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttc 265  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||    
T  16880087 aaagaggggtgatttttggtcaatttttgacccaaaatcacccctctcactcgtttttc 16880029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 5071515 - 5071439
Alignment:
Q  190 cttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||||||  ||||||||| ||||| ||||||||||    
T  5071515 cttctccttcatccatcaacgaggggtggtttatggtcaatttttgaccttaaatcacccttctaaatcgtttttct 5071439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 29734194 - 29734246
Alignment:
Q  226 tcaaattttgacccaaaatcacccctctaactcg-tttttctatttccctttt 277  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  29734194 tcaaattttgacccaaaatcactcctctaactcgttttttctatttccctttt 29734246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 3398138 - 3398037
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaaga--ggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    |||||||| ||| |||| ||||||||||||||||  |||||| |||| |||||| ||||||||| | ||||||||||||  | ||||||||  |||||||    
T  3398138 aaaccctatttttttcttcttcatccaccaaagaagggggtggtttaaggtcaatttttgaccccagatcacccctctacattgtttttctccttccctt 3398039  T
Q  276 tt 277  Q
    ||    
T  3398038 tt 3398037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 44441356 - 44441442
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||| |||||||| |||||| |||||| |||| ||||| |||||||||||||||||   |||||||||||||| | |||| |||||    
T  44441356 ttctctttcatccatcaaagatgggtgacttagagtcaatttttgacccaaaatcacttatctaactcgtttttatctttctctttt 44441442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 4878852 - 4878795
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttg 235  Q
    |||| ||||||||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  4878852 aaactctagtttcttcaccttcacccatcaaagaggggtgatttagggtcaacttttg 4878795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 24500457 - 24500575
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaa 255  Q
    |||||| || ||| ||||||  ||||| || ||||||| ||||||||||| ||||| ||||||||||||||||||     |||  |||||||||||||||    
T  24500457 tctctcttgggagccgtcaccaaaaccttaatttcttcaccttcatccactaaagatgggtgatttagggtcaaa----aaccataaatcacccctctaa 24500552  T
Q  256 ctcg-tttttctatttccctttt 277  Q
    || | ||||||||||||| ||||    
T  24500553 cttgttttttctatttccatttt 24500575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 19953355 - 19953405
Alignment:
Q  192 tctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaa 242  Q
    ||||| ||||||| ||||||||||||||||| |||||| ||||||||||||    
T  19953355 tctccatcatccatcaaagaggggtgatttatggtcaatttttgacccaaa 19953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 31263126 - 31263060
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa 229  Q
    |||||| |||| || ||||  |||||| |||| ||||||||| ||||||||||||||||||||||||    
T  31263126 tgtgagccgtcccataaactttagttttttcttcttcatccatcaaagaggggtgatttagggtcaa 31263060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 32909010 - 32909064
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaa 209  Q
    ||||||| |||||| ||||||  ||||||||||||||||||||||||||| ||||    
T  32909010 ttctctcttgtgagccgtcaccaaaaccctagtttcttctccttcatccatcaaa 32909064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 13268549 - 13268616
Alignment:
Q  196 cttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatca-cccctctaactcgtttt 263  Q
    |||||||||  |||||||||||||||| |||| | |||||| ||||||||| |||||||||||||||||    
T  13268549 cttcatccattaaagaggggtgatttatggtc-atttttgaaccaaaatcaccccctctaactcgtttt 13268616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 25516526 - 25516482
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||    
T  25516526 agaggggtgattttgggtcaaatattgaccctaaatcacccctct 25516482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 35353637 - 35353680
Alignment:
Q  206 caaagaggggtgatttagggtcaaattttgacccaaaatcaccc 249  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||    
T  35353637 caaagaggggtggtttagggtcaatttttgaccccaaatcaccc 35353680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 16720998 - 16720916
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttga 236  Q
    |||||||| || ||| ||||||  ||| ||||||||  | ||||||||||| || |||| |||||||||||||||| ||||||    
T  16720998 tttctctcttgggagccgtcaccaaaatcctagttttctttccttcatccatcagagagaggtgatttagggtcaatttttga 16720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 2251427 - 2251471
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||    
T  2251427 agaggagtgatttggggtcaaaatttgacccaaaaccacccctct 2251471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 3390464 - 3390420
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  3390464 agaggggtgattttgggtcaaaaattgaccctaaatcacccctct 3390420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 11938002 - 11937959
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  11938002 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 11937959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 12891232 - 12891189
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  12891232 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 12891189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 16880041 - 16880085
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  |||||| ||||||||||||||    
T  16880041 agaggggtgattttgggtcaaaaattgaccaaaaatcacccctct 16880085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 17037777 - 17037737
Alignment:
Q  207 aaagaggggtgatttagggtcaaattttgacccaaaatcac 247  Q
    |||||||||||||||  |||||| |||||||||||||||||    
T  17037777 aaagaggggtgatttttggtcaatttttgacccaaaatcac 17037737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 20561275 - 20561232
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  20561275 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 20561232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 25771477 - 25771433
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  25771477 agaggggtgattttgggtcaaaaattgaccctaaatcacccctct 25771433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 27191417 - 27191461
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||||||||||  ||||||| |||||| ||||||    
T  27191417 agaggggtgatttagggtcaaaaattgaccctaaatcatccctct 27191461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 27841231 - 27841275
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||||||||||  ||||||| |||||| ||||||    
T  27841231 agaggggtgatttagggtcaaaaattgaccctaaatcatccctct 27841275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 32015198 - 32015241
Alignment:
Q  209 agaggggtgatttagggtcaaattttgaccc-aaaatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  32015198 agaggggtgatttagggtc-aattttgacccaaaaatcacccctc 32015241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 54420893 - 54420770
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  54420893 tttctctcctgtgagccgtcacacgaaccctagtttcttctccttcatccaccaaagatgggtgatttagggtcaatttttgacccaaaatcactcctct 54420794  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||||||| ||||||    
T  54420793 aactcgtttttctattttcctttt 54420770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 9661787 - 9661909
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||  ||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9661787 ttctctctagtgagccgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcacccctcta 9661886  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| |||||||| ||||||||||    
T  9661887 acttgtttttctttttccctttt 9661909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 16991829 - 16991928
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  16991829 aaaccctagtttcttctccttcatccatcaaagagcggtgatttagggtcaatttttgacccaaaatcacccatctaactcgtttttctatttccctttt 16991928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 28588503 - 28588617
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||| ||||||  ||| ||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28588503 tgtgagccgtcaccaaaatcctagtttcttctccttcatccatcatagaagggtgatttagggtcaatttttgacccaaaatcacccctctaactcgttt 28588602  T
Q  263 ttctatttccctttt 277  Q
    |||| ||||||||||    
T  28588603 ttctctttccctttt 28588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 4634240 - 4634339
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||  ||||||||||    
T  4634240 aaaccctagtttcttctccttcatccatcaaagaggggtgatttaaggtcaatttttgacccaaaatcacccctctaacttgtttttccttttccctttt 4634339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 1657750 - 1657631
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc-- 252  Q
    ||||||| |||||| ||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||      
T  1657750 ttctctcttgtgagacgtcactaaaaccctagtttcttctccttcatccatcaaagagaggtgatttagggtcaatttttgacccaaaatcacccctcta 1657651  T
Q  253 --taactcgtttttctattt 270  Q
      ||||||||||||||||||    
T  1657650 attaactcgtttttctattt 1657631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 1646122 - 1645999
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| | |||| ||||||  ||||||||||||||||| |||||| |||||||||| | ||||||||||| || | |||||||||||||||||||||    
T  1646122 tttctctcttttgagccgtcactaaaaccctagtttcttcttcttcattcaccaaagagagatgatttagggttaattgttgacccaaaatcacccctct 1646023  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||| |||| |||||    
T  1646022 aactcgtttttctctttctctttt 1645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 6408374 - 6408497
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagagg-ggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||| ||||||||||||   | || ||||||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||| || ||    
T  6408374 tctctcttgtgagtcgtcatcaatactctagtttcttctccttcatccaccaaagaggaggtgattaagggtcaattttttacccaaaatcacctcttta 6408473  T
Q  255 actcgtttttctatttcccttttg 278  Q
    |||||||||| |||||||||||||    
T  6408474 actcgtttttatatttcccttttg 6408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 3673580 - 3673668
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  3673580 aaaccctactttcttctcatttatccaccaaagaggggtgatttagggtcaatttttgaccccaaatcacccctctaaatcgtttttct 3673668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 46729076 - 46728978
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||||    
T  46729076 aaactctagttttttcactttcatccaccaaagaggggtgatttagggtcaatttttgacccaaaatca-ccctctaatttgtttttctatttccctttt 46728978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 43156742 - 43156819
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgattta-gggtcaaattttgacccaaaatcacccctctaactcgtttt 263  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  43156742 tttcttctccttcatccaccaaagaggggtgatttacgggtcaatttttgacccaaaatcacccctctaacacgtttt 43156819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 23067973 - 23067906
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  23067973 gaggggtgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccctttt 23067906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 37869597 - 37869475
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||||||||||||||||||||||||||  ||||||  ||||||||||||||| | || | ||||||||| ||||||    
T  37869597 tttctctcttgtgagccgtcaccaaaaccctagtttcttctccttcatccattaaagagatgtgatttagggtcaattgttta-ccaaaatcatccctct 37869499  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||| | ||||||||||    
T  37869498 aactcgtttttatctttccctttt 37869475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 51646043 - 51646149
Alignment:
Q  171 gtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctattt 270  Q
    |||||| |||||||| ||||||| |||||||||| ||||||| | ||||||| |||||| |||| ||| |||||||||||||||| |||||||| |||||    
T  51646043 gtcacaaaaaccctactttcttcaccttcatccatcaaagagagatgatttatggtcaatttttaacctaaaatcacccctctaattcgtttttttattt 51646142  T
Q  271 ccctttt 277  Q
    |||||||    
T  51646143 ccctttt 51646149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 14542658 - 14542582
Alignment:
Q  189 tcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttc 265  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||    
T  14542658 tcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 14542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 3168997 - 3169096
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||| |||| |||||| |||||||||| |||||||||| ||||| | |||||||||||||||||||||||||||||||| | |||| |||||    
T  3168997 aaactctagttttttcttcttcattcaccaaagagaggtgatttagagtcaattattgacccaaaatcacccctctaactcgtttttttctttctctttt 3169096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 11817038 - 11817129
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttttg 278  Q
    |||||||| ||||||||| |||||||||||| |||||||| || ||||||||||||||||||||||||  ||||||||||  ||||||||||    
T  11817038 tttcttcttcttcatccatcaaagaggggtggtttagggttaagttttgacccaaaatcacccctctacatcgtttttctccttcccttttg 11817129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 41486554 - 41486629
Alignment:
Q  200 atccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    ||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  41486554 atccatcaaagaggggttatttagggtcaatttttgatccaaaatcacccctctaactcgtttttctctttccctt 41486629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 34115800 - 34115710
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||| |||||| ||||||||| | | |||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||||    
T  34115800 tttcttctcattcatctaccaaagagagataatttagggtcaatttttgacccaaaatcacccctctagttcgtttttctctttccctttt 34115710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 30416774 - 30416679
Alignment:
Q  183 ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg-tttttctatttccctttt 277  Q
    |||||||||||  |||||||||||||| |||||| ||||| |||||| |||||| |||||||||| ||||||||| | ||||||||||||||||||    
T  30416774 ctagtttcttcatcttcatccaccaaaaaggggtaatttatggtcaatttttgaaccaaaatcacacctctaacttgttttttctatttccctttt 30416679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 33021083 - 33020985
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccc-tctaactcgtttttctatttccctt 275  Q
    |||||||| |||  |||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||| || |||||||  |||||||    
T  33021083 aaaccctaattttatctccttcatccaccaaagaggggtggttttgggtcaaattttgaccccaaatcaccccatctaaatcatttttcttcttccctt 33020985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 38546290 - 38546188
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||||| ||||  ||| ||||||||||| ||| ||||| | |||||||||| |||||| ||||||  |||||||||||||||||||||||    
T  38546290 ttctctcttgtgagtcatcaccaaaatcctagtttcttttccgtcatctatcaaagaggggagatttaaggtcaa--tttgacccaaaatcacccctcta 38546193  T
Q  255 actcg 259  Q
    |||||    
T  38546192 actcg 38546188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 7242945 - 7242838
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaa 255  Q
    |||||| |||||| | ||||  |||||||||||||||||   | |||||||||| ||||| ||||||||||||| ||||||||||||||||||  |||||    
T  7242945 tctctcttgtgagccatcaccaaaaccctagtttcttct---ttatccaccaaaaaggggcgatttagggtcaatttttgacccaaaatcacctttctaa 7242849  T
Q  256 ctcgtttttct 266  Q
    || ||||||||    
T  7242848 cttgtttttct 7242838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 52555846 - 52555786
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctattt 270  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||    
T  52555846 gaggggtgatttagggacaatttttgacccaaaatcacctctctaactcgtttttctattt 52555786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 272
Target Start/End: Complemental strand, 4622877 - 4622774
Alignment:
Q  168 gtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttcta 267  Q
    ||||||||  |||| |||||||||||| ||||||| |  |||||||||||||||| |||||| |||||| ||||||||||| || || |||||||||||     
T  4622877 gtcgtcaccaaaactctagtttcttcttcttcatcaat-aaagaggggtgatttaaggtcaatttttgatccaaaatcacctctgtatctcgtttttctc 4622779  T
Q  268 tttcc 272  Q
    |||||    
T  4622778 tttcc 4622774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 29577265 - 29577149
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||| ||||||  ||| |||| ||| || |||||||||||  ||| ||||||||||||||||||  ||||||| ||||||  ||||||||    
T  29577265 ttctctcttgtgagccgtcaccaaaatcctaatttattttccttcatccataaaaaaggggtgatttagggtcactttttgactcaaaatatcccctcta 29577166  T
Q  255 actcgtttttctatttc 271  Q
     ||||||||||| ||||    
T  29577165 tctcgtttttctttttc 29577149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 40859618 - 40859670
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaa 230  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  40859618 aaaccctagtttcttcgtcttcatccaccaaagaggggtgatttagggtcaaa 40859670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 9474689 - 9474623
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgattt 221  Q
    ||||||| |||||| ||||||  ||||||||||||||||||||||||| ||||||||||| ||||||    
T  9474689 ttctctcttgtgagccgtcaccaaaaccctagtttcttctccttcatcaaccaaagagggatgattt 9474623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 35338356 - 35338448
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    |||| ||| |||||||||||| |||||||| |  |||||||||||||||||||||||| |||||||| || |||||| || |||| ||||||||    
T  35338356 cctaattttttctccttcatctaccaaagatga-tgatttagggtcaaattttgaccctaaatcacctctgtaactcattcttctctttccctt 35338448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 42972030 - 42972087
Alignment:
Q  213 gggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctattt 270  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||||    
T  42972030 gggtgatttagggtcaatttttgacccaaaatcactcatctaacttgtttttctattt 42972087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 15730127 - 15730075
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaa 230  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  15730127 aaaccctagtttctttaccttcatccaccaaagaggggtgattttgggtcaaa 15730075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 5388501 - 5388560
Alignment:
Q  207 aaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||||||||||||||||| |||||| |  ||||||||||||||| ||||||||||    
T  5388501 aaagaggggtgatttagggtcaatttttgaactcaaatcacccctctaaatcgtttttct 5388560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 53903620 - 53903666
Alignment:
Q  231 ttttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  53903620 ttttgaccctaaatcactcctctaactcgtttttctatttccctttt 53903666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 4959697 - 4959638
Alignment:
Q  213 gggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcc 272  Q
    ||||||||||||||||| |||||| ||||||||| | ||||||||| ||||||| |||||    
T  4959697 gggtgatttagggtcaatttttgatccaaaatcatcactctaactcatttttctctttcc 4959638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 46775993 - 46775915
Alignment:
Q  197 ttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttt 276  Q
    |||||||| ||||||||| ||||| | | |||| |||||||||||||||| | ||||| ||||||||||| |||||||||    
T  46775993 ttcatccatcaaagagggatgatt-atgatcaatttttgacccaaaatcatcactctatctcgtttttctctttcccttt 46775915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 277
Target Start/End: Original strand, 38434612 - 38434654
Alignment:
Q  235 gacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  38434612 gacccgaaatcacccctctaactcgtttttctatttctctttt 38434654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 44375384 - 44375330
Alignment:
Q  215 gtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatt 269  Q
    |||||||| |||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  44375384 gtgatttaaggtcaatttttgactcaaaatcactcctctaattcgtttttctatt 44375330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 9549434 - 9549483
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtc 227  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||    
T  9549434 aaaccttagtttcttctcattcatccaccaaataggggtgatttaaggtc 9549483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 23925998 - 23926095
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    ||||| || ||| |||||||| ||||| |||||||||||  ||| ||||||  |||||| |  ||||||||||||||||| ||||||||  |||||||    
T  23925998 aaaccttaatttattctcctttatccatcaaagaggggtagttttgggtcattttttgatctcaaatcacccctctaacttgtttttctccttccctt 23926095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 46716996 - 46716952
Alignment:
Q  233 ttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||    
T  46716996 ttgaccctaaatcacctctctaactcgtttttctattttcctttt 46716952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 53903560 - 53903600
Alignment:
Q  152 cttttctctcctgtgagtcgtcacacaaaccctagtttctt 192  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  53903560 cttttctcttctgtgagccgtcacacaaaccctagtttctt 53903600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 23067930 - 23067973
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||    
T  23067930 agaggggtgatttagggtcaaaaattgaccctaaatcacccctc 23067973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 46829375 - 46829418
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaa 230  Q
    |||||||| ||||||| || ||||||||||||||||||||||||    
T  46829375 tttcttcttcttcatctactaaagaggggtgatttagggtcaaa 46829418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 12519632 - 12519712
Alignment:
Q  196 cttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||  |||||  ||||||||| | |||| ||||||| ||||||||  | |||||||||||||||| ||||||||||    
T  12519632 cttcatccattaaagataggtgatttatgatcaa-ttttgactcaaaatcaatcatctaactcgtttttctctttccctttt 12519712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 26576607 - 26576562
Alignment:
Q  231 ttttgacccaaaatcacccctctaactcgtttttctatttcccttt 276  Q
    ||||||||||||||||| ||||||| | |||||| |||||||||||    
T  26576607 ttttgacccaaaatcacacctctaatttgtttttatatttcccttt 26576562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 33021011 - 33021052
Alignment:
Q  212 ggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||||| |||||||| |||||||||||| |||||||||    
T  33021011 ggggtgatttggggtcaaaatttgacccaaaaccacccctct 33021052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 43244524 - 43244480
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctct 253  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  43244524 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctct 43244480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 56061956 - 56062019
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||||||| ||| ||| ||| |||||||||||||||||||| || ||||||| |||||||||||||    
T  56061956 tttcttcttctt-atctaccgaagaggggtgatttagggtc-aactttgaccgaaaatcacccctc 56062019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 3673655 - 3673611
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  3673655 agaggggtgatttggggtcaaaaattgaccctaaatcacccctct 3673611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 9661885 - 9661841
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  9661885 agaggggtgattttgggtcaaaaattgaccctaaatcacccctct 9661841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 28618537 - 28618660
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  28618537 tttctctcctgtgagccgtcacacaagccctagtttcttctccttcatcagccaaagaggggtgatttaaggtcaatttttaacccaaaatcacccctct 28618636  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||    
T  28618637 aactcgtttttctatttccctttt 28618660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 34894073 - 34893985
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  34894073 aaaccctagtttcttctccttcatccatcaaagaggggtgatttacggtcaatttttgacccaaaatcacccctctaactcgtttttct 34893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 31645763 - 31645885
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||  ||||| ||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  31645763 ttctctctagtgagccgtcaccaaaaccctagtttcttctccttcatccattaaagaggggtgatttagggtcaatttttgatccaaaatcacccctcta 31645862  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| |||||||  ||||||||||    
T  31645863 acttgtttttccttttccctttt 31645885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 277
Target Start/End: Complemental strand, 6887349 - 6887236
Alignment:
Q  164 gtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttt 263  Q
    ||||| ||||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  6887349 gtgagccgtcaccaaaactctagtttcttctccttcatccatcaaagaggggtgatttagggtcaatttttaacccaaaatcacccctctaacttgtttt 6887250  T
Q  264 tctatttccctttt 277  Q
    ||  ||||||||||    
T  6887249 tccttttccctttt 6887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 33486753 - 33486627
Alignment:
Q  152 cttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccct 251  Q
    |||||||||| || ||| ||||||  ||||| || ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |    
T  33486753 cttttctctcttgggagccgtcaccaaaaccttaatttcttcaccttcatccactaaagaggggtgatttagggtcaatttttgacccaaaatcacccat 33486654  T
Q  252 ctaactcg-tttttctatttccctttt 277  Q
    |||||| | ||||||||||||||||||    
T  33486653 ctaacttgttttttctatttccctttt 33486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 6648070 - 6647971
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||| || ||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  6648070 aaaccctagtttattttccttcatccatcaaagaggggcgatttatggtcaaattttgacccaaaatcactcctctaactcgtttttcgctttccctttt 6647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 4070488 - 4070610
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaacc-ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||||||| ||| || ||||||| ||| | ||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  4070488 tttctctcgtgtaagccgtcacaaaaaactctagtttcttctc-ttcatccaccaaaaaggggtgatttagggtcat-ttttgacccaaaatcacccctc 4070585  T
Q  253 taactcgtttttctatttccctttt 277  Q
    | |||||||||||||||||| ||||    
T  4070586 tgactcgtttttctatttccttttt 4070610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 2415333 - 2415456
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| |||||   ||||||||||||  | ||||||||||| ||||||  |||||||||||||||| ||||||||||||||||||| |||    
T  2415333 tttctctcttgtgagccgtcatcaaaaccctagtttaatttccttcatccatcaaagataggtgatttagggtcaatttttgacccaaaatcacccttct 2415432  T
Q  254 aactcgtttttctatttccctttt 277  Q
    |||| |||||||| ||||||||||    
T  2415433 aacttgtttttctttttccctttt 2415456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 19646188 - 19646094
Alignment:
Q  188 ttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttttgatga 282  Q
    ||||||||||||||| |||||||||||||| |||| ||||||  ||||||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  19646188 ttcttctccttcatcgaccaaagaggggtggtttaaggtcaatgtttgacccaaaatcacccctctaactcatttttctctttcccttttaatga 19646094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 18472902 - 18472782
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| || ||| ||||||  |||| ||||||||||| ||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||    
T  18472902 ttctctcttgggagccgtcaccaaaactctagtttcttcaccttcatccaccaaagaggg---atttagggtcaatttttgacccaaaatcacccctcta 18472806  T
Q  255 actcg-tttttctatttccctttt 277  Q
    ||| | ||||||||||| ||||||    
T  18472805 acttgttttttctattttcctttt 18472782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 278
Target Start/End: Original strand, 41988141 - 41988241
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| |||||||||||||||||| | | ||||||||||||||||||| |||| ||||||  ||||||| |||||||||||||||||||| ||||||||||    
T  41988141 aaactctagtttcttctccttcacctatcaaagaggggtgatttaggatcaatttttgattcaaaatcgcccctctaactcgtttttctctttccctttt 41988240  T
Q  278 g 278  Q
    |    
T  41988241 g 41988241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 37424949 - 37425035
Alignment:
Q  178 aaaccctagttt-cttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttt 263  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||||    
T  37424949 aaaccctagttttcttttccttcatccaccaaagaggggtgatttatggtcaatttctgacccaaaatcacgcctctaactcgtttt 37425035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 41554447 - 41554543
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg-tttttctatttccctttt 277  Q
    |||| ||||||| ||||||| || ||||||||||||||||||| |||| |||||| |||||||||||||||||||| | ||||||||||||||||||    
T  41554447 cctaatttcttcaccttcattcatcaaagaggggtgatttaggatcaatttttgatccaaaatcacccctctaacttgttttttctatttccctttt 41554543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 9035101 - 9035006
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||| | ||| ||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||||| ||||| ||||    
T  9035101 cctagtttcttctccttcatctatcaatgaggggtgatttatgatcaatttttgactcaaaatcatccctctaactcgtttttctctttccatttt 9035006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 8812315 - 8812209
Alignment:
Q  172 tcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaac-tcgtttttctattt 270  Q
    ||||| |||| |||||||||||  |||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||| |  |||||||||||    
T  8812315 tcacaaaaactctagtttcttcatcttcatccaccaaaaaggggtgatatagggtcaatttttaacccaaaatcacccctctaacatgttttttctattt 8812216  T
Q  271 ccctttt 277  Q
    || ||||    
T  8812215 ccttttt 8812209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 15710497 - 15710598
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttg--acccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    |||| |||||||||| ||||||||||| |||||| |||||||||| |||||| ||||   | ||||||||||||||||||||||||||||| ||||||||    
T  15710497 aaactctagtttcttttccttcatccatcaaagatgggtgatttatggtcaattttttttatccaaaatcacccctctaactcgtttttctctttccctt 15710596  T
Q  276 tt 277  Q
    ||    
T  15710597 tt 15710598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 41357995 - 41358095
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatca-cccctctaactcgtttttctatttcccttt 276  Q
    |||| |||||||||| ||||||||  | ||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||    
T  41357995 aaactctagtttcttttccttcatagatcaaagataggtgatttagggtcaatttttgacccaaaatcaccccctctaactcgtttttctcttttccttt 41358094  T
Q  277 t 277  Q
    |    
T  41358095 t 41358095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 4727053 - 4726986
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||| |||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||    
T  4727053 gaggggtaatttagggtcaatttttgacccaaaatcatccatataactcgtttttctatttccctttt 4726986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 29310476 - 29310407
Alignment:
Q  208 aagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||   ||||||||||    
T  29310476 aagaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttttcttttccctttt 29310407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 41063576 - 41063454
Alignment:
Q  153 ttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||||| || ||| || ||||||  ||| |||| |||||||||||||||||| ||||||||| ||||  |||||||| ||||||| ||||||||| | ||    
T  41063576 ttttctatcttgtcagccgtcaccaaaatcctaatttcttctccttcatccatcaaagaggg-tgatc-agggtcaatttttgactcaaaatcactcatc 41063479  T
Q  253 taactcgtttttctatttccctttt 277  Q
    |||||||||||||| ||||| ||||    
T  41063478 taactcgtttttctctttccatttt 41063454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 40565293 - 40565224
Alignment:
Q  197 ttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||||||||||||||| ||||||||  | ||||||||| |||||||| |||||| ||||||||||    
T  40565293 ttcatccaccaaagaggggtggtttagggttgatttttgaccccaaatcacctctctaaatcgtttttct 40565224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 34950433 - 34950511
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatca-cccctctaa 255  Q
    |||||||| ||| ||||| |||||||||||||||| |||| |||| |||||| | |||||||||||||| |||||||||    
T  34950433 aaaccctacttttttctcattcatccaccaaagagaggtggtttatggtcaattcttgacccaaaatcatcccctctaa 34950511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 5378317 - 5378358
Alignment:
Q  236 acccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  5378317 accctaaatcacccctctaactcgtttttctatttccctttt 5378358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 17326335 - 17326246
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaatttt-gacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||| || ||||| ||||||||||||||||| |||| ||||||||||  ||||  | || ||||||||||||||| ||||||||||    
T  17326335 aaaccctaattacttcttcttcatccaccaaagagtggtggtttagggtcattttttatatcctaaatcacccctctaaatcgtttttct 17326246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 12524779 - 12524680
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||| |||||| ||||||||||||||||||||||||  ||  | |||| |||||| |  || |||||||||||| ||||||||||  |||||||||    
T  12524779 aaactctaatttcttttccttcatccaccaaagaggggtgggttccgatcaatttttgaacacaagtcacccctctaaatcgtttttctccttccctttt 12524680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 6074887 - 6074794
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtga----tttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||| ||||||||||||||||||||||     |||||||||||  |||| ||| |||||| |||||||| ||||||||||  |||||||||    
T  6074887 tttcttcttcttcatccaccaaagaggggtgggtggtttagggtcaatctttgcccctaaatca-ccctctaaatcgtttttctccttccctttt 6074794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 34843880 - 34843972
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaa--attttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||| ||||||||||| |||||||  |||||   |||| | ||||||||||| |||||||   |||| |||||||||||||    
T  34843880 tttcttctccttcatcgaccaaagagggatgatttatagtcaattttttttatccaaaatcacctctctaacctattttcctatttccctttt 34843972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 13079141 - 13079194
Alignment:
Q  222 agggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||||  | | ||||||||||| ||||||||||    
T  13079141 agggtcaaattttgacccaaaatcaccc--caacctcgtttttctctttccctttt 13079194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 34873849 - 34873917
Alignment:
Q  210 gaggggtgatttagggtcaaattttg-acccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||| ||||  | | |||||||||| |||||||||||||||  ||||||||||    
T  34873849 gaggggtgatttagggtcaatttttttatcgaaaatcacccttctaactcgtttttcagtttccctttt 34873917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 8957177 - 8957256
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||  |||||||||||||||||||||| ||||||||||| | | ||||| |||| || | ||||  ||||||||||    
T  8957177 tttcttcatcttcatccaccaaagaggggtggtttagggtcaattgtggaccccaaattactcatctacatcgtttttct 8957256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 22397720 - 22397606
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg-tt 261  Q
    |||||| ||||||  |||| ||| ||||||||||||||||||| ||  |  | ||||||||||||||  ||||| | ||||||| |  ||||||||| ||    
T  22397720 tgtgagccgtcaccaaaactctaatttcttctccttcatccacaaagaatagatgatttagggtcaatatttgatcgaaaatcatcaatctaactcgttt 22397621  T
Q  262 tttctatttcccttt 276  Q
    ||||||||| |||||    
T  22397620 tttctattttccttt 22397606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 28040607 - 28040663
Alignment:
Q  209 agaggggtgatttagggtcaaattttgaccc-aaaatcacccctctaactcgtttttc 265  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||| || |||||||||    
T  28040607 agaggggtgatttacggtc-aattttgacccaaaaatcacccctccaaatcgtttttc 28040663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 7771949 - 7771906
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  7771949 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 7771906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 10924222 - 10924186
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtga 218  Q
    |||| |||||||||||||||||| |||||||||||||    
T  10924222 cctaatttcttctccttcatccatcaaagaggggtga 10924186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 13007688 - 13007716
Alignment:
Q  222 agggtcaaattttgacccaaaatcacccc 250  Q
    |||||||||||||||||||||||||||||    
T  13007688 agggtcaaattttgacccaaaatcacccc 13007716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 17096385 - 17096342
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaa-aatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  17096385 agaggggtgatttagggtc-aattttgacccaataatcacccctc 17096342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 17331306 - 17331349
Alignment:
Q  209 agaggggtgatttagggtcaaattttgaccc-aaaatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  17331306 agaggggtgatttagggtc-aattttgacccaaaaatcacccctc 17331349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 30371640 - 30371596
Alignment:
Q  208 aagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    ||||||||||||||  |||||||| ||||||||||| ||||||||    
T  30371640 aagaggggtgatttcaggtcaaatattgacccaaaaccacccctc 30371596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 164 - 277
Target Start/End: Complemental strand, 9819 - 9706
Alignment:
Q  164 gtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttt 263  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  9819 gtgagccgtcacaaaaaccctagtttcttctccttcatccaccaaagagggatgatttagggtcaatttttgacccaaaatcactcctctaactcgtttt 9720  T
Q  264 tctatttccctttt 277  Q
    ||||||||||||||    
T  9719 tctatttccctttt 9706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 9269953 - 9270077
Alignment:
Q  153 ttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||| |||| |||||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  9269953 ttttatctcttgtgagccgtcacgaaaactctagtttcttctccttcatccaccaaagaggggtgatttatgatcaatttttgacccaaaatcacccctc 9270052  T
Q  253 taactcgtttttctatttccctttt 277  Q
    |||||||||||||| ||||||||||    
T  9270053 taactcgtttttctctttccctttt 9270077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 31874027 - 31874140
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31874027 tgtgagccgtcac-caaaccctagtttcttctccttcatccatcaaagagaggtgatttagggtcaatttttgacccaaaatcacccctctaactcgttt 31874125  T
Q  263 ttctatttccctttt 277  Q
    |||  ||||||||||    
T  31874126 ttccttttccctttt 31874140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 16937496 - 16937397
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||    
T  16937496 aaaccctagtttcttcaccttcatccaccaaagaggggtgatttagggtcaatttttgatccaaaatcatccctctaacttgtttttctatttccctttt 16937397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 36545934 - 36545839
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  36545934 cctagtttcttctccttcatccaccaaagagggatgatttaaggtcaatttgtgacccaatatcacccctctaactcgtttttctctttccctttt 36545839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 10042718 - 10042804
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||||||||||  |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  10042718 aaaccctagttcattctccttcatccaccaaagaggggtgatttatggtcaatttttgacccaaaatcacccctctaactcgttttt 10042804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 23766676 - 23766789
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||  |||||||| |||||| |||||||||||||||||||   ||    
T  23766676 ttctctcttgtgagtcgtcacaaaaactctagtttcttctacttcatccaccaaagagatgtgatttaaggtcaatttttgacccaaaatcaccc--ata 23766773  T
Q  255 actcgtttttctattt 270  Q
    ||||||||||||||||    
T  23766774 actcgtttttctattt 23766789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 9992598 - 9992721
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  | ||| || ||||||||||||||| ||  | || |||||||||||||||||| |||||||||||||||||||||||    
T  9992598 tttctctcttgtgagccgtcaccaagaccataatttcttctccttcattcattagaggggggtgatttagggtcaatttttgacccaaaatcacccctct 9992697  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||| ||||||||||    
T  9992698 aactcgtttttctctttccctttt 9992721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 15665496 - 15665595
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||||||  |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||| |||||    
T  15665496 aaactctagtttctttcccttcatccaacaaagaggggtgatttagggtcaacttttgacacaaaatcacccctctaacttgtttttctctttcactttt 15665595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 26937486 - 26937581
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||| || ||||||||||    
T  26937486 cctagtttcttatcctgcatccaccaaagaggggttatttagggttaagttttgactcaaaatcacccctctaactcgttttcctttttccctttt 26937581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 37658923 - 37659022
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||| ||| ||| | ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||| ||||||||||||    
T  37658923 aaaccctaattttttcactttcatccaccaaagaggggtgatttagggtcaatttttgacacaaaatcacccctctaatttgtttttatatttccctttt 37659022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 32256875 - 32256779
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa-attttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| |||||| ||||||||||||    
T  32256875 cctagttttttcatcttcatccaccaaagaggggtgatttagggtcaatttttttacccaaaatcacccctctaacttgtttttttatttccctttt 32256779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 13864316 - 13864415
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||  | ||||||||||||||||| |||||| |||||| |||||||||||  | |||||||||||| ||||||||||||    
T  13864316 aaaccctagtttcttctccttcatttatcaaagaggggtgatttaaggtcaacttttgagccaaaatcacctatgtaactcgtttttttatttccctttt 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 32061751 - 32061835
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||||| ||||| ||||||    
T  32061751 aaaccctaatttcttctccttcatccaccaaagaggggtagtttagggtcaatttttgaccccaaatcacccttctaaatcgttt 32061835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 44295284 - 44295360
Alignment:
Q  189 tcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttc 265  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||    
T  44295284 tcttctccttcatccatcaaagaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 44295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 8054933 - 8054868
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctt 275  Q
    |||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||    
T  8054933 gaggggtgatttagggtcaatttttgacccaaaattatccctctaactcgtttttctatttccctt 8054868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 14327436 - 14327524
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||| |  ||||||||||    
T  14327436 aaacgctaatttcttctccttcatccaccaaagaggggtggtttagggtcaatttttgaccccaattcacccctccatatcgtttttct 14327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 5989596 - 5989691
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttttgatga 282  Q
    ||||||||||||| ||||| ||| | | ||||||||||||||| |||| ||||||||||||  ||||||||||||||||| |||||||||| ||||    
T  5989596 tttcttctccttcctccactaaataagagtgatttagggtcaatttttaacccaaaatcacatctctaactcgtttttctctttccctttttatga 5989691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 14115973 - 14115875
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||| |||||| |||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||    
T  14115973 tttctctcttgtgagccgtcacctaaactctagttacttctctttcatccaccaaagatgggtgattta-ggtcaatttttgacccaaaatcatccctct 14115875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 37719808 - 37719894
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| | ||||||||   | ||||||||||||    
T  37719808 aaaccctagtttcttctccttcatccaccaaggacgggtgatttagggtcaatttttgaactaaaatcacttttttaactcgttttt 37719894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 3680883 - 3680979
Alignment:
Q  183 ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa--attttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||   |||| ||||||||||||  |||||||| |||||||| ||| ||||||    
T  3680883 ctagtttcttctctttcatccaccaaagaggggtgatttagagtcaatttttttcacccaaaatcacttctctaacttgtttttctcttttcctttt 3680979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 13977387 - 13977457
Alignment:
Q  207 aaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||||||||||||| |||||||    
T  13977387 aaagaggggtgatttatggtcaaatttttacccaaaattacccatctaattcgtttttctattcccctttt 13977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 16997041 - 16996988
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccacca 207  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  16997041 tttctctcctgtgagtcgtcacacaagctctagtttcttctccttcatccacca 16996988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 32920613 - 32920697
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||| |||||||| ||| |||||||||||||||||| |||||||||||  |||| ||| |||||||| |||||| ||||||||||    
T  32920613 cctaatttcttcttctttatccaccaaagaggggtggtttagggtcaatctttgcccctaaatcaccgctctaaatcgtttttct 32920697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 284623 - 284544
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||||| ||| || ||||||||||||||    
T  284623 tttcttctcattcatccactaaagagaggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 284544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 631254 - 631333
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||||| ||| || ||||||||||||||    
T  631254 tttcttctcattcatccactaaagagaggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 631333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 817066 - 817145
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||||| ||| || ||||||||||||||    
T  817066 tttcttctcattcatccactaaagagaggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 817145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 37129838 - 37129764
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa 229  Q
    |||||||| |||||| ||||||| |||||||||||| |||||||||||||||||| |||| ||||||| |||||||    
T  37129838 tttctctcttgtgaggcgtcaca-aaaccctagtttattctccttcatccaccaaggaggtgtgattttgggtcaa 37129764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 14531056 - 14530977
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||||| | ||| | |||||||||||| ||||||||||| ||||||| | ||||||||| ||||| ||||||||||    
T  14531056 tttcttctccattatcgatcaaagaggggtggtttagggtcaatttttgactccaaatcacccttctaaatcgtttttct 14530977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 18191000 - 18190915
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||||||| |||||| |||||||||||| ||||| ||||| ||||||||||| ||||||| | ||||||||  ||||| ||||||||    
T  18191000 aaaccctaatttcttttccttcatccactaaaga-gggtggtttagggtcaatttttgactccaaatcaccaatctaaatcgttttt 18190915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 15237756 - 15237695
Alignment:
Q  216 tgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||| |||| || | ||||||||| |||||||||||||||| ||||||||||    
T  15237756 tgatttagggtcaatttttaactctaaatcacccatctaactcgtttttctctttccctttt 15237695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 31713192 - 31713135
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttg 235  Q
    |||| ||||||||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  31713192 aaactctagtttcttcaccttcacccatcaaagaggggtgatttagggtcaacttttg 31713135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 1215483 - 1215408
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||||||||| ||||||| ||||  |||||| ||| ||||||||| |||||||| |||||| || |||||||    
T  1215483 ttctccttcatccatcaaagagcggtggattagggccaatttttgaccccaaatcaccgctctaaatcatttttct 1215408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 5917866 - 5917800
Alignment:
Q  207 aaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttt 276  Q
    ||||||||||||||| | |||||  ||||||||||||||||||||||| |||| |||||| |||||||||    
T  5917866 aaagaggggtgattttgagtcaa--tttgacccaaaatcacccctctagctcg-ttttctctttcccttt 5917800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 31147944 - 31147859
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||| || |||||| || |||||||||||||| ||||||||||||||  | | ||| ||||||||||||  |||||||||    
T  31147944 ttctccttcattcatcaaagaaggatgatttagggtcaatttttgacccaaaattgctcatct-actcgtttttctcgttccctttt 31147859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 7281309 - 7281192
Alignment:
Q  153 ttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||||| || |||||| ||||||  |||| |||||||||||||| ||||| | |||  || |||| ||||| ||||  |||| |||| ||||||||| ||    
T  7281309 ttttctttcttgtgagccgtcaccaaaactctagtttcttctccctcatctatcaagtagaggtgttttagagtcagtttttaaccctaaatcacccatc 7281210  T
Q  253 taactcgtttttctattt 270  Q
    ||||||| |||| |||||    
T  7281209 taactcgcttttttattt 7281192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 16996987 - 16996945
Alignment:
Q  234 tgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  16996987 tgacccaaaatcacccctctaactcg-ttttctattttcctttt 16996945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 17019109 - 17019160
Alignment:
Q  226 tcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||||||||||||||| ||||| | |||||||| ||||||||||    
T  17019109 tcaatttttgacccaaaatcacccttctaaattgtttttctctttccctttt 17019160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 17549546 - 17549597
Alignment:
Q  226 tcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||||||||||||||| ||||| | |||||||| ||||||||||    
T  17549546 tcaatttttgacccaaaatcacccttctaaattgtttttctctttccctttt 17549597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 27534543 - 27534480
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||| ||||| |||| ||||||||||||||||||||||| |||||| || |||||  |||||||    
T  27534543 ttcttcttcaaccacgaaagaggggtgatttagggtcaatttttgatcccaaatcgtccctcta 27534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 11656037 - 11655979
Alignment:
Q  208 aagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||| |||||||||||| |||| ||||||||| ||||||| | || |||||||||||||    
T  11656037 aagatgggtgatttaggatcaatttttgacccgaaatcactcttccaactcgtttttct 11655979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 12244398 - 12244289
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa-attttgacccaaaatcacccctct 253  Q
    ||||||| |||||| |||||   ||| | ||||||||||||||||||| |  || || ||||||||| |||||||  |||| | |||||||||| ||| |    
T  12244398 ttctctcttgtgagccgtcatcaaaatcttagtttcttctccttcatctattaatgaagggtgattttgggtcaatttttttatccaaaatcactccttt 12244299  T
Q  254 aactcgtttt 263  Q
    ||||||||||    
T  12244298 aactcgtttt 12244289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 14919570 - 14919449
Alignment:
Q  152 cttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcac-ccc 250  Q
    ||||||||||  |||| |||||||  |||||||||||| |  ||||||||| | |||||||| |||||||||||| ||  ||||| |||||||||| ||     
T  14919570 cttttctctc--gtgaatcgtcactaaaaccctagtttata-tccttcatctatcaaagaggagtgatttagggttaa--tttgatccaaaatcactcct 14919476  T
Q  251 tctaactcgtttttctatttcccttttg 278  Q
    || ||||||||||| | |||||||||||    
T  14919475 tcaaactcgttttt-tctttcccttttg 14919449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 16938401 - 16938328
Alignment:
Q  206 caaagaggggtgatttagggtcaa-attttgacccaaaatcacccctctaactcgtttttctatttcccttttg 278  Q
    ||||||||||||||||||||||||  |||| |||  ||||||  ||| ||||| |||||||| |||||||||||    
T  16938401 caaagaggggtgatttagggtcaatttttttaccataaatcattcctttaacttgtttttctctttcccttttg 16938328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 1810370 - 1810327
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  1810370 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 1810327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 6833454 - 6833522
Alignment:
Q  197 ttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaa-tcacccctctaactcgttttt 264  Q
    ||||||||  |||||  ||||||||||| | || ||||||||||||| |||||||||||||| ||||||    
T  6833454 ttcatccataaaagataggtgatttaggattaatttttgacccaaaaatcacccctctaactggttttt 6833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 8073470 - 8073522
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaatttt 234  Q
    |||||||| ||||||||||||||||||| | ||||| |||| |||||| ||||    
T  8073470 cctagttttttctccttcatccaccaaaaatgggtggtttatggtcaattttt 8073522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 10147924 - 10147967
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaa-aatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  10147924 agaggggtgatttagggtc-aattttgacccaataatcacccctc 10147967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 37612631 - 37612674
Alignment:
Q  209 agaggggtgatttagggtcaaattttgaccc-aaaatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  37612631 agaggggtgatttagggtc-aattttgacccaaaaatcacccctc 37612674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 16913270 - 16913372
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16913270 tgtgagccgtcaccaaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacccgaaatcacccctctaactcgttt 16913369  T
Q  263 ttc 265  Q
    |||    
T  16913370 ttc 16913372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 12576642 - 12576537
Alignment:
Q  171 gtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctattt 270  Q
    |||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  12576642 gtcacaaaaatcctagtttcttttccttcatccacgaaagaggggtgatttagggtcaatttttgaccctaaatcacccctctaacttgtttttctattt 12576543  T
Q  271 cccttt 276  Q
    ||||||    
T  12576542 cccttt 12576537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 20844940 - 20845064
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagagggg-tgatttagggtcaaattttgacccaaaatcacccctc 252  Q
    |||||||| |||||| ||||||  ||||| ||||||||||||||| ||| |||||||||||| | ||| | |||||| ||||||||||||||||||||||    
T  20844940 tttctctcttgtgagccgtcaccaaaaccttagtttcttctcctttatctaccaaagagggggtaattcaaggtcaatttttgacccaaaatcacccctc 20845039  T
Q  253 taactcgtttttctatttccctttt 277  Q
    |||||||||||||| ||||||||||    
T  20845040 taactcgtttttctctttccctttt 20845064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 4663977 - 4663878
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| ||||||| | |||| |||||    
T  4663977 aaaccctaatttcttctccttcatccaccaaagaggggtgattgtgggtcaatttttgacccaaaatcacccctctaacacgtttttatgtttctctttt 4663878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 7049180 - 7049302
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  ||||| || ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     
T  7049180 tttctctcttgtgagccgtcaccaaaaccataattttttctccttcatccaccaaagaggggtgatttagggtcaacttttgactcaaaatcacccctc- 7049278  T
Q  254 aactcgtttttctatttccctttt 277  Q
    | ||| ||||||| ||||||||||    
T  7049279 agctcatttttctctttccctttt 7049302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 19759777 - 19759844
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19759777 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttccctttt 19759844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 10744541 - 10744622
Alignment:
Q  183 ctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  10744541 ctagtttcttcaccttcatccaccaaagatgggtgatttagggtcaacttttgacccaaaatcactcctctaacttgttttt 10744622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 32457603 - 32457696
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttc 271  Q
    ||||| |||||| |||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  32457603 aaaccttagttttttctccttcatctactaaagaggggtgatttagcgtcaatttttgacccaaaatcacccatctaactcgtttttctctttc 32457696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 273
Target Start/End: Original strand, 32574386 - 32574505
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||||||| ||||||||||||||||||||||| |  |||| ||||| ||||| |||||||||||||| | ||||||    
T  32574386 tttctctcttgtgagccgtcaccaaaaccctattttcttctccttcatccaccaaatataggtgttttagagtcaatttttgacccaaaattaaccctct 32574485  T
Q  254 aactcgtttttctatttccc 273  Q
    |||||| |||||| ||||||    
T  32574486 aactcgcttttctctttccc 32574505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 8644187 - 8644301
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttt 262  Q
    |||||| ||||||  ||||||||||||| | ||||||||||| |||| | ||||||||||||||||| |||||||| ||||||||| ||| || || |||    
T  8644187 tgtgagccgtcaccaaaaccctagtttcatttccttcatccatcaaaaatgggtgatttagggtcaatttttgaccaaaaatcaccactcaaattcattt 8644286  T
Q  263 ttctatttccctttt 277  Q
    |||| ||||||||||    
T  8644287 ttctctttccctttt 8644301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 549016 - 548923
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||| ||||||||||||||| |  |||| ||||| || |||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  549016 cctaattttttctccttcatccacta--gaggagtgatataaggtcaatttttgacccaaaatcacccctctaactcgtttttctttttccctttt 548923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 275
Target Start/End: Complemental strand, 15128316 - 15128209
Alignment:
Q  167 agtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||||  ||| | ||||||||||| ||||||||| ||||||  | ||||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  15128316 agtcgtcaccaaaatcttagtttcttctacttcatccatcaaagatagatgatttagg-tcaatttttgtcccaaaatcacccctctaactcgtttttct 15128218  T
Q  267 atttccctt 275  Q
     ||||||||    
T  15128217 ctttccctt 15128209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 891551 - 891633
Alignment:
Q  184 tagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||||||||||||||||  |||||| ||||||| |||||| | |||||||||||||| |||||| ||||||||||||||    
T  891551 tagtttcttctccttcatccattaaagagaggtgattaagggtcgatttttgacccaaaattacccctataactcgtttttct 891633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 32257919 - 32258028
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaa 255  Q
    |||||| |||||||||||||  ||| |||||||||||||| |||||||| ||||||||| |||| || |||||| ||||||||| ||||||| | || ||    
T  32257919 tctctcttgtgagtcgtcactaaaatcctagtttcttctc-ttcatccatcaaagagggatgatgtaaggtcaatttttgacccgaaatcactcatcaaa 32258017  T
Q  256 ctcgtttttct 266  Q
    |||||||||||    
T  32258018 ctcgtttttct 32258028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 32804252 - 32804337
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    ||||||||||| ||||| |||||||| || |||| ||||||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  32804252 aaaccctagttacttctacttcatcc-cctaagatgggtgatttagggtcaatttttgacccaaaatcacccatctaactcattttt 32804337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 31747926 - 31748009
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcc 272  Q
    ||||||||| ||||||| |||||||| | |||||||||||||| ||||||||  |||  ||||||||||||||||||||| |||||    
T  31747926 tttcttctcattcatccgccaaagagagatgatttagggtcaatttttgacc--aaaagacccctctaactcgtttttctctttcc 31748009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 34020582 - 34020643
Alignment:
Q  185 agtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatca 246  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||| ||||    
T  34020582 agtttcttcttcttcatctaccaaagaggggtggtttagggtcaatttttgacccaacatca 34020643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 13234233 - 13234166
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||| |||||||| ||||||| || ||||| |||||||||| ||||||||||    
T  13234233 agaggggtgatttagggtcaatttttgacctaaaatca-ccttctaattcgtttttctttttccctttt 13234166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 33194561 - 33194656
Alignment:
Q  177 caaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcc 272  Q
    |||||| ||||||||||| |||||||||   || |  |||||||||||||||| |||||| ||||||||||  |||||| |||||||||| |||||    
T  33194561 caaaccatagtttcttcttcttcatccattcaatattggtgatttagggtcaatttttgatccaaaatcacatctctaattcgtttttctctttcc 33194656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 31804214 - 31804280
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa 229  Q
    |||||||| ||||| ||||| |||||| |||||||| |||||| |||||||||||||||||| ||||    
T  31804214 tgtgagtcatcacaaaaaccatagttttttctcctttatccactaaagaggggtgatttaggatcaa 31804280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 8633343 - 8633275
Alignment:
Q  156 tctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagg 224  Q
    |||||| |||||| ||||||| ||| ||||||||||||| ||| |||||| ||||| ||||||||||||    
T  8633343 tctctcttgtgagccgtcacaaaaatcctagtttcttcttctttatccacgaaagaagggtgatttagg 8633275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 12576560 - 12576604
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||    
T  12576560 agaggggtgatttagggtcaaaaattgaccctaaatcacccctct 12576604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 1944114 - 1944149
Alignment:
Q  239 caaaatcacccctctaactcgtttttctatttccct 274  Q
    |||||||||||||||||||||||||||| |||||||    
T  1944114 caaaatcacccctctaactcgtttttctctttccct 1944149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 15590222 - 15590178
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctct 253  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15590222 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctct 15590178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 21507951 - 21507895
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaa-atcacccctctaactcgtttttc 265  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| || | |||||||    
T  21507951 agaggggtgatttagggtc-aattttgacccaaacatcacccctccaaattgtttttc 21507895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 22530290 - 22530335
Alignment:
Q  231 ttttgacccaaaatcacccctctaactcgtttttctatttcccttt 276  Q
    ||||||||||||||||||| | |||||| ||||||| |||||||||    
T  22530290 ttttgacccaaaatcacccatttaactcctttttctctttcccttt 22530335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 277
Target Start/End: Complemental strand, 23843511 - 23843482
Alignment:
Q  248 ccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||||||    
T  23843511 ccctctaactcgtttttctatttccctttt 23843482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 4663902 - 4663946
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  |||||||| ||||||||||||    
T  4663902 agaggggtgattttgggtcaaaaattgacccacaatcacccctct 4663946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 16913360 - 16913316
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  16913360 agaggggtgatttcgggtcaaaaattgaccctaaatcacccctct 16913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 22345092 - 22344970
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    |||||||  ||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  22345092 ttctctctagtgagccgtcaccaaaaccctagtttcttctccttcatccatcaaagaggggtgatttaggttcaatttttgacccaaaatcacccctcta 22344993  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||| |||||||  ||||||||||    
T  22344992 acttgtttttccttttccctttt 22344970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 14717423 - 14717301
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||| ||||||    
T  14717423 tttctctcttgtgagccgtcaccaaaactctagtttcttctccttcatccaccaaagaggggtgatttagggtcaatttttgacttaaattca-ccctct 14717325  T
Q  254 aactcgtttttctatttccctttt 277  Q
    ||||||||||||| ||||||||||    
T  14717324 aactcgtttttctttttccctttt 14717301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 6213042 - 6212944
Alignment:
Q  179 aaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||  ||||||||||    
T  6213042 aaccctagtttcttctccttcgtccatcaaagaggggtgatttatggtcaatttttgacccaaaatcacacctctaactcgtttttccttttccctttt 6212944  T

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Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 44514147 - 44514047
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcg-tttttctatttcccttt 276  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| || ||||| | |||||||||||||||||    
T  44514147 aaaccctaatttcttcaccttcatccactaaagaggggtgatttagggtcaatttttgacccaaaatcacctctttaacttgttttttctatttcccttt 44514048  T
Q  277 t 277  Q
    |    
T  44514047 t 44514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 5832220 - 5832289
Alignment:
Q  208 aagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  5832220 aagaggggtgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttccctttt 5832289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 44562871 - 44562807
Alignment:
Q  213 gggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44562871 gggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttccctttt 44562807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 276
Target Start/End: Complemental strand, 30853940 - 30853841
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatca-cccctctaactcgtttttctatttcccttt 276  Q
    |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||||||||||||| |||| |||| || ||||||| |||||||||    
T  30853940 aaaccctagtttcttctccttcatccaccaaagaggtgtgattcaaggtcaatttttgacccaaaatcacccccactaagtcatttttctctttcccttt 30853841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 52839380 - 52839466
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||| ||||||| ||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  52839380 aaactctagtttgttctctttcatccattaaagaggggtgatttagggtcaatttttgacccaaaatcacccttctaactcgttttt 52839466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 51921324 - 51921423
Alignment:
Q  1 ctcatcatgctacaaagatgcaagaaacataaaagaaataatggggtggatgaaatatttaatgtaaaaaataaagcattacatatatagcagaaaaagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||||||    
T  51921324 ctcatcatgctacaaagatgcaagaaacataaaagaaataatggggtggatga-------------------aaagcattacatatatagcagaaaaagt 51921404  T

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Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 4564484 - 4564539
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4564484 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaa 4564539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 630909 - 630843
Alignment:
Q  211 aggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  630909 aggggtgatttagggtcaatttttgaccctaaatcacccatctaactcgtttttctatttccctttt 630843  T

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Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 37685275 - 37685155
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||| ||||||| ||| ||||||||||| ||||||||||||||||||||   |||| || ||||| ||||||||||||||||  ||||||    
T  37685275 ttctctcttgtgagccgtcacaaaaatcctagtttctt-tccttcatccaccaaagaggaacgattgagagtcaatttttgacccaaaatcaatcctcta 37685177  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||||| |||||||||||| ||||    
T  37685176 actcg-ttttctatttccttttt 37685155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 37700243 - 37700363
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||||| ||||||| ||| ||||||||||| ||||||||||||||||||||   |||| || ||||| ||||||||||||||||  ||||||    
T  37700243 ttctctcttgtgagccgtcacaaaaatcctagtttctt-tccttcatccaccaaagaggaacgattgagagtcaatttttgacccaaaatcaatcctcta 37700341  T
Q  255 actcgtttttctatttccctttt 277  Q
    ||||| |||||||||||| ||||    
T  37700342 actcg-ttttctatttccttttt 37700363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 13691916 - 13691827
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagagggg-tgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||| || |||||||| |||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  13691916 aaaccttaatttcttcttcttcatccactaaagagggggtggtttagggtcaatttttgacccaaaatcacccctctaaatcgtttttct 13691827  T

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Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 10877303 - 10877402
Alignment:
Q  179 aaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttg-acccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| |||||||||||| ||  |||||||||||| ||||||||| |||||| ||||  |||||||||||| |||||||||||||||||| ||||||||||    
T  10877303 aaccttagtttcttctcttttgtccaccaaagagtggtgatttatggtcaatttttttacccaaaatcacacctctaactcgtttttctctttccctttt 10877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 21326462 - 21326529
Alignment:
Q  210 gaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||    
T  21326462 gaggggtgatttaggatcaatttttgaacaaaaatcacccctctaactcgtttttctatttccctttt 21326529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 26199531 - 26199630
Alignment:
Q  155 ttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtca----aattttgacccaaaatcacccc 250  Q
    ||||||| |||||||||||||  ||| | |||||||||||||||||||||||||||||||||||  ||||||||    ||||||||||||||||||||||    
T  26199531 ttctctcttgtgagtcgtcactaaaatcttagtttcttctccttcatccaccaaagaggggtga-atagggtcaatttaattttgacccaaaatcacccc 26199629  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 33703667 - 33703567
Alignment:
Q  177 caaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatca-cccctctaactcgtttttctatttccctt 275  Q
    |||| |||||||| ||||||||||||||| |||||||| ||||||| |||||| |||| ||||||||||| ||||||  ||||| |||||||||||||||    
T  33703667 caaaacctagttttttctccttcatccactaaagagggatgatttatggtcaattttttacccaaaatcaccccctcacactcg-ttttctatttccctt 33703569  T
Q  276 tt 277  Q
    ||    
T  33703568 tt 33703567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 38646541 - 38646629
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||| ||| ||| |||||||||||| | |||||||| |||||||| |||||| ||||||||||||||||||| | ||||||||||||||    
T  38646541 aaactctaattttttctccttcatctatcaaagaggagtgatttatggtcaatttttgacccaaaatcacccatgtaactcgtttttct 38646629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 17579744 - 17579823
Alignment:
Q  197 ttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttt 276  Q
    ||||| || ||||||||||||| |||||||||| |||||| ||||||||| ||||||||||| ||||||| |||||||||    
T  17579744 ttcattcatcaaagaggggtgacttagggtcaatttttgaaccaaaatcatccctctaactcatttttctctttcccttt 17579823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 52839497 - 52839564
Alignment:
Q  197 ttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgttttt 264  Q
    |||||||| ||||||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||    
T  52839497 ttcatccatcaaagaggggtgatttatgatcaatttttgacccaaaatcacccttctaactcgttttt 52839564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 23320450 - 23320496
Alignment:
Q  231 ttttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23320450 ttttgacccaaaatcacccctctaactcgtttttctatttccctttt 23320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 22032262 - 22032169
Alignment:
Q  163 tgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgaccc-aaaatcacccctctaa 255  Q
    |||||| ||||||| ||||| || ||| |  | ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  22032262 tgtgagccgtcacaaaaaccttaatttttatttcttcatccaccaaagagggatgatttagggtcaatttttgacccaaaaatcacccctctaa 22032169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 35078045 - 35077954
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttc 271  Q
    |||||||||||| |||||| |||| ||| |||||| | ||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  35078045 aaaccctagttt-ttctccctcattcac-aaagagagatgatttatgatcaaattttgacccaaaatcacctctctaactcgtttttctctttc 35077954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 12148181 - 12148106
Alignment:
Q  202 ccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||| |||||||||| ||||  |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  12148181 ccaccaaagagcggtgatttagcgtcagtttttgacccaaaaataccactctaactcgtttttctatttccttttt 12148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 46589140 - 46589217
Alignment:
Q  187 tttcttctccttcatcc--accaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttt 263  Q
    |||||||||||||||||  ||||||||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||    
T  46589140 tttcttctccttcatccccaccaaagaggggtgatttatgatcaatttttgactcaaaatca-ccctctaactcgtttt 46589217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 52752002 - 52752084
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||| |||||||| ||||||||| ||||||||| |    |||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  52752002 ttctctttcatccatcaaagagggatgatttaggat----ttttgatccaaaatcacctctctaactcgtttttctttttccctttt 52752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 45658672 - 45658720
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggt 226  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  45658672 aaaccctagtttcttctctttcatccatcaaagaggggtgatttagggt 45658720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 8893294 - 8893349
Alignment:
Q  222 agggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||| || ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  8893294 agggttaatttttgacccaaaatcacccttctaactcgtttttctctttccctttt 8893349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 9189211 - 9189285
Alignment:
Q  191 ttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttc 265  Q
    |||||||||||||| |||||||||||||||||  || || |||| |||| ||||||| ||||||| |||||||||    
T  9189211 ttctccttcatccatcaaagaggggtgatttattgtaaattttttaccctaaatcacacctctaaatcgtttttc 9189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 18889032 - 18889097
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||||||| ||| |||||||||||||||||||| ||| ||||||| || ||||||||||||||    
T  18889032 tttcttctcctttatctaccaaagaggggtgatttagagtc-aattttggccgaaaatcacccctct 18889097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 45659041 - 45659098
Alignment:
Q  220 ttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  45659041 ttagggtcaatttttgacccaaaatcactgctctaactcgtttttctctttacctttt 45659098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 27469913 - 27469821
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatca 246  Q
    ||||| || |||||| ||||||  |||  |||||||||||| |||||||||  |||||||||||||||| |||||| ||| || |||||||||    
T  27469913 tttctttcttgtgagccgtcaccaaaattctagtttcttcttcttcatccattaaagaggggtgatttaaggtcaattttcgaaccaaaatca 27469821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 2350588 - 2350667
Alignment:
Q  187 tttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    ||||||||| ||||||||||||||||||||| | ||||||||| |||| |||| || ||| ||||| || || |||||||    
T  2350588 tttcttctcattcatccaccaaagaggggtggtgtagggtcaatttttaaccccaattcatccctccaagtcatttttct 2350667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 4564535 - 4564574
Alignment:
Q  238 ccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  4564535 ccaaaatcacccctctaactcgtttttctatttctctttt 4564574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 40992351 - 40992390
Alignment:
Q  238 ccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  40992351 ccaaaatcacccctctaactcgtttttctctttccctttt 40992390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 48655199 - 48655124
Alignment:
Q  202 ccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||  ||  ||||| ||||| | ||||||||||    
T  48655199 ccaccaaaaaggggtgatttagagtcaatttttgacccaaaatcacatctgcaactcatttttatctttccctttt 48655124  T

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Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 29066988 - 29067074
Alignment:
Q  153 ttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgaccc 239  Q
    ||||||||| ||||||||||||   ||| |||||||||||||| |||||  | |||| || ||||||||| |||||| |||||||||    
T  29066988 ttttctctcttgtgagtcgtcatcaaaatcctagtttcttctcattcatttatcaaatagaggtgatttatggtcaatttttgaccc 29067074  T

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Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 2875717 - 2875625
Alignment:
Q  184 tagtttcttctccttcatccaccaaagagg-ggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttcccttt 276  Q
    |||||| ||||||||||||||||||| | | |||| |||| |||||| | ||||||| ||||||||||||||| | ||||||||  ||||||||    
T  2875717 tagtttattctccttcatccaccaaaaaagaggtg-tttatggtcaattgttgaccccaaatcacccctctaaattgtttttctccttcccttt 2875625  T

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Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 15276553 - 15276508
Alignment:
Q  232 tttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||||    
T  15276553 tttgacccaaaatcacccatctcactcgtttttctctttccctttt 15276508  T

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Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 23257063 - 23257104
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgat 219  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  23257063 aaaccctagtttcttctccttcatctgccaaagaggggtgat 23257104  T

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Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 5832265 - 5832221
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||    
T  5832265 agaggggtgatttagggtcaaaaattgaccctaaatcacccctct 5832221  T

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Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 1767936 - 1767983
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttaggg 225  Q
    ||||| |||||||||||| || ||||| ||||||||||||||||||||    
T  1767936 aaaccatagtttcttctcttttatccatcaaagaggggtgatttaggg 1767983  T

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Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 49651840 - 49651891
Alignment:
Q  226 tcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| |||||| |||||||||| | |||||||||||||||||||||| ||||    
T  49651840 tcaatttttgatccaaaatcacacatctaactcgtttttctatttccttttt 49651891  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 10264743 - 10264781
Alignment:
Q  192 tctccttcatccaccaaagaggggtgatttagggtcaaa 230  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  10264743 tctccttcatctactaaagaggggtgatttagggtcaaa 10264781  T

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Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 33939145 - 33939088
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctctaactcgtttttct 266  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| | | ||||||||    
T  33939145 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctctgaattgtttttct 33939088  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 424434 - 424391
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  424434 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 424391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 12871599 - 12871642
Alignment:
Q  209 agaggggtgatttagggtcaaattttgaccc-aaaatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  12871599 agaggggtgatttagggtc-aattttgacccaaaaatcacccctc 12871642  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 33487173 - 33487130
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaaaa-tcacccctc 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  33487173 agaggggtgatttagggtcaa-ttttgacccaaaaatcacccctc 33487130  T

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Target: scaffold0011 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 10976 - 11072
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccct 274  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||| ||||||| |||||||  ||||||||||||||||||| ||||||| |||||||    
T  10976 aaaccctagtttcttctctatcatacaccaaagatgggtgattttgggtcaatttttgacttaaaatcacccctctaactcatttttctttttccct 11072  T

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Target: scaffold1294 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 737 - 836
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||||||||||||||||||||||| ||  |||||||| |||||| |||||||| ||||||| | |||||||||||||| || ||||||||||    
T  737 aaactctagtttcttctccttcatccaccaaaaagatgtgatttaaggtcaatttttgaccaaaaatcatcactctaactcgttttcctctttccctttt 836  T

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Target: scaffold0012 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 244565 - 244681
Alignment:
Q  152 cttttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaa--attttgacccaaaatcaccc 249  Q
    |||||||||| |||||| ||||||  |||||  |||||||||| |||||||||| |||||||| ||||||||||||||   |||| |||  |||||||||    
T  244565 cttttctctcttgtgagccgtcaccaaaacctaagtttcttcttcttcatccacaaaagagggttgatttagggtcaattttttttaccataaatcaccc 244664  T
Q  250 ctctaactcgtttttct 266  Q
    |||||||||||||||||    
T  244665 ctctaactcgtttttct 244681  T

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Target: scaffold0665 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 1272 - 1174
Alignment:
Q  154 tttctctcctgtgagtcgtcacacaaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctct 253  Q
    |||||||| |||||| ||||||  |||| |||||| |||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||    
T  1272 tttctctcttgtgagccgtcacctaaactctagttacttctctttcatccaccaaagatgggtgattta-ggtcaatttttgacccaaaatcatccctct 1174  T

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Target: scaffold0009 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 105009 - 105097
Alignment:
Q  178 aaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttct 266  Q
    |||||||| ||| |||| ||||||||||||||||| |||| |||| |||||||||||||||| |||||| |||||||  ||||||||||    
T  105009 aaaccctaatttattcttcttcatccaccaaagagaggtggtttaaggtcaaattttgaccccaaatcagccctctacatcgtttttct 105097  T

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Target: scaffold0340 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 277
Target Start/End: Complemental strand, 11909 - 11835
Alignment:
Q  203 caccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||  | |||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||    
T  11909 caccaaagatagatgatttagtgtcaatttttgacccaaaatcactcatctaactcgtttttctatttccctttt 11835  T

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Target: scaffold0316 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 12347 - 12261
Alignment:
Q  182 cctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||||||||||||||||||||         |||||||||| |||||||||||||||| | ||||| |||||| |||| ||||||||||    
T  12347 cctagtttcttctccttcatccaccaaag---------ttagggtcaatttttgacccaaaatcatctctctagctcgttcttctctttccctttt 12261  T

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Target: scaffold0722 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 5643 - 5584
Alignment:
Q  218 atttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||||| ||||||| ||||||  ||||| ||||||||||||||||||| |||||    
T  5643 atttagggtcaatttttgactcaaaattgcccctttaactcgtttttctatttctctttt 5584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 25661 - 25595
Alignment:
Q  188 ttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctcta 254  Q
    ||||||| |||| ||||||||||||||||| |||| |||||| |||| |||| ||| ||||||||||    
T  25661 ttcttcttcttcgtccaccaaagaggggtggtttaaggtcaattttttaccccaaagcacccctcta 25595  T

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Target: scaffold0150 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 10434 - 10383
Alignment:
Q  226 tcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||| ||||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  10434 tcaatttttgacccaaaaccacccttctaacttgtttttctctttccctttt 10383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 137217 - 137111
Alignment:
Q  177 caaaccctagtttcttctccttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactc-gtttttctatttccctt 275  Q
    |||| |||||||||||| | ||||| ||||||||||||||||||| || |    |||  | ||||||| |||| ||||||||  ||||||||||||||||    
T  137217 caaaacctagtttcttcactttcattcaccaaagaggggtgatttgggtttttttttatatccaaaataacccttctaactcattttttctatttccctt 137118  T
Q  276 ttgatga 282  Q
    || ||||    
T  137117 ttaatga 137111  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 1279 - 1199
Alignment:
Q  196 cttcatccaccaaagaggggtgatttagggtcaaattttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||||||  |||||  ||||||||| | |||| ||||||| ||||||||  | |||||||||||||||| ||||||||||    
T  1279 cttcatccattaaagataggtgatttatgatcaa-ttttgactcaaaatcaatcatctaactcgtttttctctttccctttt 1199  T

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Target: scaffold0536 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 2878 - 2921
Alignment:
Q  209 agaggggtgatttagggtcaaattttgacccaa-aatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  2878 agaggggtgatttagggtc-aattttgacccaataatcacccctc 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 6115 - 6158
Alignment:
Q  209 agaggggtgatttagggtcaaattttgaccc-aaaatcacccctc 252  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  6115 agaggggtgatttagggtc-aattttgacccaaaaatcacccctc 6158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 36541 - 36585
Alignment:
Q  233 ttgacccaaaatcacccctctaactcgtttttctatttccctttt 277  Q
    |||||| |||||||||| |||||||||||||||  ||||||||||    
T  36541 ttgacctaaaatcacccttctaactcgtttttccttttccctttt 36585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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