View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18006_high_13 (Length: 347)
Name: NF18006_high_13
Description: NF18006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18006_high_13 |
 |  |
|
| [»] scaffold0760 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 18246394 - 18246723
Alignment:
| Q |
1 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18246394 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
18246493 |
T |
 |
| Q |
101 |
taacgcttcagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcataga |
200 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18246494 |
taacgctccagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattctcgtggattccacgtccactcataga |
18246593 |
T |
 |
| Q |
201 |
agaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18246594 |
agaggaaagaagctatcttcaacctactcaacatccaaacccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
18246693 |
T |
 |
| Q |
301 |
tagttaaatcatatgaaaaattaattaaaa |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
18246694 |
tagttaaatcatatgaaaaattaattaaaa |
18246723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 2920785 - 2921041
Alignment:
| Q |
1 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
100 |
Q |
| |
|
||||||||||||||||||| ||| ||| | ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
2920785 |
caagtagaaaataagcacatataaacaag-aagggtggaaacaaaccaaattccaaaaaagtaaatttacaaaatccctcccatagatctgcaccaacaa |
2920883 |
T |
 |
| Q |
101 |
taacgcttcagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcataga |
200 |
Q |
| |
|
||||||| ||||||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||||| | |
|
|
| T |
2920884 |
taacgctccagctacaacaacacagaaaggcagattcaaaaagaaagccacgttcatcttctgtttagacattctcgtggattccatgtccactcataaa |
2920983 |
T |
 |
| Q |
201 |
agaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaat |
258 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
2920984 |
agaggaaagaagctatctttaacctactcaacatccaaacccaagaaagtgctttaat |
2921041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 1034358 - 1034267
Alignment:
| Q |
179 |
ggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactat |
270 |
Q |
| |
|
|||||||| ||||||||||| |||||||| || |||| ||| || ||||||||| |||||| |||||||| ||||||||| |||| |||||| |
|
|
| T |
1034358 |
ggattccaagtccactcataaaagaggaacgatgctatctttaatctactcaacgtccaaacccaagaaaccgctttaatctcatccactat |
1034267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 32549018 - 32548934
Alignment:
| Q |
130 |
gcagattcaaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcatagaagaggaaagaagcta |
215 |
Q |
| |
|
||||||||||||| ||||| | |||||||||| |||||||||| || |||||| | ||||||| ||| |||| ||||||||||| |
|
|
| T |
32549018 |
gcagattcaaaaaaacagcacccttcatcttctatttagacattatctaggattctaagtccacttataaaaga-gaaagaagcta |
32548934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 310; Significance: 1e-174; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 1259141 - 1259470
Alignment:
| Q |
1 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1259141 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
1259240 |
T |
 |
| Q |
101 |
taacgcttcagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcataga |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1259241 |
taacgctccagctacaacagcacaaaaaggcagattcaaaaagacagccgtgttcatcttctgtttagacattctcgtggattccacgtccactcataga |
1259340 |
T |
 |
| Q |
201 |
agaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1259341 |
agaggaaagaagctatcttcaacctactcaacatccaaacccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
1259440 |
T |
 |
| Q |
301 |
tagttaaatcatatgaaaaattaattaaaa |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
1259441 |
tagttaaatcatatgaaaaattaattaaaa |
1259470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 37242429 - 37242758
Alignment:
| Q |
1 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37242429 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccataaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
37242528 |
T |
 |
| Q |
101 |
taacgcttcagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcataga |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37242529 |
taacgctccagctacaacagcacaaaaaggcagattcaaaaagacagccgtgttcatcttctgtttagacattctcgtggattccacgtccactcataga |
37242628 |
T |
 |
| Q |
201 |
agaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37242629 |
agaggaaagaagctatcttcaacctactcaacatccaaacccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
37242728 |
T |
 |
| Q |
301 |
tagttaaatcatatgaaaaattaattaaaa |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
37242729 |
tagttaaatcatatgaaaaattaattaaaa |
37242758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 53553676 - 53553728
Alignment:
| Q |
179 |
ggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaa |
231 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||| ||| || |||||||| |
|
|
| T |
53553676 |
ggattccaagtccactcataaaagaggaaagaagctatctttaatctactcaa |
53553728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 16989843 - 16989514
Alignment:
| Q |
1 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16989843 |
caagtagaaaataagcacaaatatacatggaagggcggaaacaagccaaactccaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaacaa |
16989744 |
T |
 |
| Q |
101 |
taacgcttcagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcataga |
200 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
16989743 |
taacgctccagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattctcatggattccacgtccactcataga |
16989644 |
T |
 |
| Q |
201 |
agaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16989643 |
agaggaaagaagctatcttcaacctactcaacatccaaacccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacca |
16989544 |
T |
 |
| Q |
301 |
tagttaaatcatatgaaaaattaattaaaa |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
16989543 |
tagttaaatcatatgaaaaattaattaaaa |
16989514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 31234592 - 31234922
Alignment:
| Q |
1 |
caagtagaaaataagcacagatatacatggaagggcggaaacaagccaaactccaaaa-aagtaaatttacaaaatccctcccatagaaccgcaccaaca |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31234592 |
caagtagaaaataagcacagatatacatggaagggcggaaacaatccaaactccaaaaaaagtaaatttacaaaatccctcccatagaaccgcaccaaca |
31234691 |
T |
 |
| Q |
100 |
ataacgcttcagctacaacagcacaaaaaggcagattcaaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcatag |
199 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
31234692 |
ataacgctctagctacaacatcacaaaaaggcagattcaaaaagacagtcgtgttcatcttctgtttagacattctcgtggattccaagtccactcatag |
31234791 |
T |
 |
| Q |
200 |
aagaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacc |
299 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31234792 |
aagaggaaagaagctatcttcaacctactcaacatccaaacccaagaaagcgctttaatttcattcactattttagtttgtttactctaattttcaaacc |
31234891 |
T |
 |
| Q |
300 |
atagttaaatcatatgaaaaattaattaaaa |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
31234892 |
atagttaaatcatatgaaaaattaattaaaa |
31234922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 2319613 - 2319545
Alignment:
| Q |
262 |
attcactattttagtttgtttactctaattttcaaaccatagttaaatcatatgaaaaattaattaaaa |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2319613 |
attcactattttagtttgtttactctaattttcaaaccatagttaaatcatatgaaaaattaattaaaa |
2319545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 37269828 - 37269936
Alignment:
| Q |
138 |
aaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatcca |
237 |
Q |
| |
|
||||||||||||| |||||||||| || ||||||| || |||||||| ||||||||||| |||||||| ||||||| ||| | |||||||||| ||| |
|
|
| T |
37269828 |
aaaaagacagccggcttcatcttctattaagacattctctaggattccaagtccactcataaaagaggaaggaagctatcttaagtctactcaacaccca |
37269927 |
T |
 |
| Q |
238 |
aatccaaga |
246 |
Q |
| |
|
|| |||||| |
|
|
| T |
37269928 |
aaaccaaga |
37269936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 36404064 - 36404178
Alignment:
| Q |
153 |
ttcatcttctgtttagacattttcgtggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgc |
252 |
Q |
| |
|
|||||||||| |||| ||||| || |||||||| |||||||| ||||||||||| ||||||| ||| | ||||||||| ||||| |||||| | | | |
|
|
| T |
36404064 |
ttcatcttctatttaaacattctctaggattccaagtccactcgtagaagaggaaggaagctatcttaagtctactcaacgcccaaaaccaagataccac |
36404163 |
T |
 |
| Q |
253 |
tttaatttcattcac |
267 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
36404164 |
tttgatttcattcac |
36404178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 42941340 - 42941232
Alignment:
| Q |
138 |
aaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatcca |
237 |
Q |
| |
|
||||||||||||| |||||||||| || |||||| || |||||||| ||||||||||| |||||||| ||||||| ||| | |||||||||| || |
|
|
| T |
42941340 |
aaaaagacagccggcttcatcttctattacgacattctctaggattccaagtccactcataaaagaggaaggaagctatctttagtctactcaacacccc |
42941241 |
T |
 |
| Q |
238 |
aatccaaga |
246 |
Q |
| |
|
|| |||||| |
|
|
| T |
42941240 |
aaaccaaga |
42941232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 8273895 - 8273805
Alignment:
| Q |
179 |
ggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcacta |
269 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||| || |||||| | |||||| |||||||| ||| ||||| |||| ||||| |
|
|
| T |
8273895 |
ggattccaaatccactcataaaagaggaaagaagctatctttaatctactcgtcgtccaaacccaagaaaccgccttaatctcatccacta |
8273805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 36989088 - 36988995
Alignment:
| Q |
179 |
ggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactattt |
272 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||| ||||| |||||||||| |
|
|
| T |
36989088 |
ggattccacgtccacttatagaagaggaaagaagctatcttcaacctactcaacaaccaaacccaagaaaccgctttgatttcgttcactattt |
36988995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 11272577 - 11272496
Alignment:
| Q |
191 |
cactcatagaagaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgctttaatttcattcactattt |
272 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||||| |||||| ||||||||||| |||| |
|
|
| T |
11272577 |
cactcatagaagaggaaagaagctatctttaacctactcaacgtccaaacccaagaaaccgctttgatttcattcacaattt |
11272496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 33858639 - 33858715
Alignment:
| Q |
138 |
aaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcatagaagaggaaagaagct |
214 |
Q |
| |
|
||||| |||||| |||||||||||| |||||||||| ||| |||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
33858639 |
aaaaaaacagccacgttcatcttctatttagacattctcgaggattccaagtccactcatataagaggaaggaagct |
33858715 |
T |
 |
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Target: scaffold0760 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0760
Description:
Target: scaffold0760; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 1707 - 1815
Alignment:
| Q |
138 |
aaaaagacagccgcgttcatcttctgtttagacattttcgtggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatcca |
237 |
Q |
| |
|
|||||||||| || |||||||||| || ||||||| || |||||||| ||||||||||| |||||||| ||||||| ||| | |||||||||| ||| |
|
|
| T |
1707 |
aaaaagacagtcggcttcatcttctattaagacattctctaggattccaagtccactcataaaagaggaaggaagctatcttaagtctactcaacaccca |
1806 |
T |
 |
| Q |
238 |
aatccaaga |
246 |
Q |
| |
|
|| |||||| |
|
|
| T |
1807 |
aaaccaaga |
1815 |
T |
 |
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Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 32774127 - 32774243
Alignment:
| Q |
153 |
ttcatcttctgtttagacattttcgtggattccacgtccactcatagaagaggaaagaagctaccttcaacctactcaacatccaaatccaagaaagcgc |
252 |
Q |
| |
|
|||||||||| ||||| || | || |||||||| ||||||||||| |||||||| || |||| ||| || ||||||||| |||||| |||||||| ||| |
|
|
| T |
32774127 |
ttcatcttctatttaggcactctctaggattccaagtccactcataaaagaggaatgaggctatctttaatctactcaacgtccaaacccaagaaaccgc |
32774226 |
T |
 |
| Q |
253 |
tttaatttcattcacta |
269 |
Q |
| |
|
||| || |||| ||||| |
|
|
| T |
32774227 |
tttgatctcatccacta |
32774243 |
T |
 |
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