View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18006_high_21 (Length: 270)
Name: NF18006_high_21
Description: NF18006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18006_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 39940995 - 39941225
Alignment:
| Q |
21 |
tccatacactgaacttgaggaagttagctccgattttgttttagcaattggcttgcaagaacaagagttagagagaacaacagtcacaaacctagcaacc |
120 |
Q |
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| T |
39940995 |
tccatacactgaacttgaggaagttagctctgattttgttctagcaattggcttgcaagaacaagagttagagagaacaacattcacaaacctagcaacc |
39941094 |
T |
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| Q |
121 |
attgaaagtgaaagtgacgaagatataagtgactcctcttttagtaatgatgatattggtgatgctgatttttcatttagtcaggagttcgaaaccgatc |
220 |
Q |
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| T |
39941095 |
attgaaagtgaaagtgacgaagatataagtgactcctcttttagtaatgatgatattggtgatgctgatttttcatttagtcaggagttcgaaaccgatc |
39941194 |
T |
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| Q |
221 |
ttcagtttcttgaagatgaaggaagcaatat |
251 |
Q |
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|||||||| |||||||||||||||||||||| |
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| T |
39941195 |
ttcagtttgttgaagatgaaggaagcaatat |
39941225 |
T |
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