View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18006_low_30 (Length: 282)
Name: NF18006_low_30
Description: NF18006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18006_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 16 - 266
Target Start/End: Original strand, 40325160 - 40325410
Alignment:
| Q |
16 |
tgtgcatttaaaatttgcttggttactgttctcttaatttttgctatcaacataaatttgtgattgtgggattttaaagagaaactgtttccatgagaat |
115 |
Q |
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| T |
40325160 |
tgtgcatttaaaatttgcttggttactgttctcttaatttttgctatcaacataaatttgtgattgtgggattttaaagagaaactgtttccatgagaat |
40325259 |
T |
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| Q |
116 |
cttcaagtttcaattcaaccataaccataaactactgtgggagactgtgatgtcaagttatctacctatcttctttatacaacaagaatgctaaaaccaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40325260 |
cttcaagtttcaattcaaccataaccataaactactgtgggagactgtgatgtcaagttatctacctatcttctttatacaacaagaatgctaaaaccaa |
40325359 |
T |
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| Q |
216 |
gtattgaatcgatgcttagagaggtttctttcattctttctaggaattgac |
266 |
Q |
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| T |
40325360 |
gtattgaatggatgcttagagaggtttctttcattctttctaggaattgac |
40325410 |
T |
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