View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18006_low_34 (Length: 269)
Name: NF18006_low_34
Description: NF18006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18006_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 42487571 - 42487818
Alignment:
| Q |
9 |
agcacagaagccagaagcatacaaagaagagagtttgcaaatgtggaaaggtggaaacaatatgagtggccagatggaatagcagagtaagaattttgat |
108 |
Q |
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| T |
42487571 |
agcacagaagccagaagcatacaaagaagagagtttgcaaatgtggaaaggtggaaacaatatgagtggccagatggaatagcagagtaagaattttgat |
42487670 |
T |
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| Q |
109 |
tgaaactgttccatgaggtatggaccaaggagtagcatagcaacaaaagtaagaaagacaggcaagatagaattctgaatgaaaaatcaagaggataaca |
208 |
Q |
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| T |
42487671 |
tgaaactgttccatgaggtatggaccaaggagtagcatagcaacaaaagtaagaaagacaggcaagatagaattctgaatgaaaaatcaagaggataaca |
42487770 |
T |
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| Q |
209 |
atgctcaaaaggccgatcaaagacataaaacaaaatcaatgaatttca |
256 |
Q |
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| T |
42487771 |
atgctcaaaaggccgatcaaagacataaaacaaaatcaatgaatttca |
42487818 |
T |
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