View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18007_high_51 (Length: 298)
Name: NF18007_high_51
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18007_high_51 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 24066399 - 24066680
Alignment:
| Q |
1 |
tgcaaatagatgataagtaaagatgcagaaaaataccttaggaatgagagaagaagcttcgtctctgaaagtggaacaagttgatgaaaaattgttgtcc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
24066399 |
tgcaaatagatgataagtaaagatgcagaaaaataccttaggaatgagagaagaagcttcgtctctgaaagtggaacgagttgatgaaaaattgttgtcc |
24066498 |
T |
|
| Q |
101 |
aacaggtatttgtaaacgacgaatgcaacctgttgagggatgtttttatcctccattgtagtgaaggttaaacgatttaagcatgctgtaaataattaaa |
200 |
Q |
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||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24066499 |
aacaggtatttgtcaacgatgaatgcaacctgttgagggatgtttttatcgtccattgtagtgaaggttaaacgatttaagcatgctgtaaataattaaa |
24066598 |
T |
|
| Q |
201 |
cgagaaagtagttagtaattgtgtgaagtgatgatcgtttaggtattcacatgaggnnnnnnngttgattagaacatcaaat |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
24066599 |
cgagaaagtagttagtaattgtgtgaagtgatgatcgtttaggtattcacatgaggtttttttgttgattagaacatcaaat |
24066680 |
T |
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