View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18007_high_57 (Length: 279)
Name: NF18007_high_57
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18007_high_57 |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 20155156 - 20155417
Alignment:
| Q |
1 |
ataaaaacaagaaccaaaatcatcaaaaacaaccaagagtcttgaacaactaaatgaagtaagtaatgaacagggtataaccctaatataccatataagc |
100 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20155156 |
ataaaaacaagaaccaaaatcatcagaaacaaccaagagtcttgaacaactaaatgaagtaagtaatgaacagggtataaccctaatataccatataagc |
20155255 |
T |
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| Q |
101 |
agtttaacttgagtccctgaaaagatcacttggacataaatttcgaaacatccaccatggacagtctcaagtgtggatggttggctgggtctttgtacat |
200 |
Q |
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|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
20155256 |
agtttaacttgagtaccagaaaagatcacttggacataaatttcgaaacatccaccatggacagtctcaagtgtggatggttggttgggtctttgtacat |
20155355 |
T |
|
| Q |
201 |
cttgatcacgctgcactgctcattaggtggttttttattcaagtcgacacttacatagataa |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20155356 |
cttgatcacgctgcactgctcattaggtggttttttattcaagtcgacacttacatagataa |
20155417 |
T |
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