View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18007_high_75 (Length: 240)
Name: NF18007_high_75
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18007_high_75 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 8318946 - 8319169
Alignment:
| Q |
1 |
catttgacattctcacaaccttcgcgaactttagtggacttgagaaagattcttctagctcacagctgtgtgattttagttcaattgacattcatttgac |
100 |
Q |
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| T |
8318946 |
catttgacagtctcacaaccttcgcgaactttagtgaacttgagaaagattcttctatctcatagctgtgtgattttagttcaattgacattcatttgac |
8319045 |
T |
|
| Q |
101 |
ttcttgagaattgactaaatataattcaattgcttgccgaaattaactaacaacttatattaattttaggtgtaaacaaatgtccatttgtgttgcatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
8319046 |
ttcttgagaattgactaaatataattcaattgcttgccgattttaactaacaacttacattaattttaggtgtaaacaaatgtccatttgtgttgcatta |
8319145 |
T |
|
| Q |
201 |
tttgtaaaattaagttgagaggtg |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
8319146 |
tttgtaaaattaagttgagaggtg |
8319169 |
T |
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