View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18007_high_83 (Length: 227)
Name: NF18007_high_83
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18007_high_83 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 29447454 - 29447235
Alignment:
| Q |
1 |
aaaagccactgccccatcagatggtaataaaaccaactctattggaccagagatcaagtgacataaaggtgaattcccatcaacatagagacagagactg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29447454 |
aaaagccactgccccatcagatggtaataaaaccaactctattggaccagagatcaagtgacataaaggtgaattcccatcaacatagagacagagactg |
29447355 |
T |
|
| Q |
101 |
gccagttttggatcagagaggaactcataagataggtcatgttgaacctttgaagaccatggttcaaccacaacttcatgaacaagaggaatcaagctca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
29447354 |
gccagttttggatcagagaggaactcataagataggtcatgttgaacctttgaagaccatggttcaaccacaacttcatgaacaagaggaatcaatctca |
29447255 |
T |
|
| Q |
201 |
aactcagactcttcatctca |
220 |
Q |
| |
|
|||||||||||||| ||||| |
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|
| T |
29447254 |
aactcagactcttcttctca |
29447235 |
T |
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