View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18007_high_94 (Length: 206)
Name: NF18007_high_94
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18007_high_94 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 11346878 - 11346704
Alignment:
| Q |
16 |
atgaactttgcaaggaagaacacattacaaggcaatatacggtgagaaatactccacaaaagaatggtgttgctgagcgaatgaatataactttttggaa |
115 |
Q |
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| T |
11346878 |
atgaactttgcaaggaagaacacattacaaggcaatatacggtgagaaatactccacaaaagaatggtgttgctgagcgaatgaatataactttttggaa |
11346779 |
T |
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| Q |
116 |
agagctcgttgtatgttttcaaatgccaggctgaataggagtttccaagcagaggctataagcacaaaatgttat |
190 |
Q |
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| T |
11346778 |
agagctcgttgtatgttttcaaatgccgggctgaataggagtttccaagcagaggctataagcacaaaatgttat |
11346704 |
T |
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