View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18007_low_33 (Length: 395)

Name: NF18007_low_33
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18007_low_33
NF18007_low_33
[»] chr5 (32 HSPs)
chr5 (184-381)||(28809931-28810133)
chr5 (74-167)||(28812342-28812435)
chr5 (1-75)||(18520912-18520986)
chr5 (1-70)||(2740277-2740346)
chr5 (2-70)||(35785202-35785270)
chr5 (5-68)||(28177780-28177843)
chr5 (1-75)||(13811650-13811724)
chr5 (2-68)||(35943921-35943987)
chr5 (5-68)||(6679703-6679766)
chr5 (1-79)||(33149666-33149744)
chr5 (1-75)||(36732970-36733044)
chr5 (1-70)||(14831817-14831886)
chr5 (1-70)||(40145410-40145479)
chr5 (1-70)||(42414330-42414399)
chr5 (3-68)||(15409640-15409705)
chr5 (8-68)||(2252203-2252263)
chr5 (14-70)||(36875644-36875700)
chr5 (5-68)||(26720521-26720584)
chr5 (5-68)||(26990270-26990333)
chr5 (8-68)||(3921300-3921360)
chr5 (10-68)||(10356639-10356698)
chr5 (5-70)||(33825356-33825421)
chr5 (1-68)||(31008993-31009060)
chr5 (5-79)||(16327895-16327969)
chr5 (10-79)||(39688934-39689003)
chr5 (7-82)||(9603804-9603879)
chr5 (83-169)||(11100688-11100772)
chr5 (108-163)||(813816-813871)
chr5 (7-70)||(6260035-6260098)
chr5 (35-73)||(21370014-21370052)
chr5 (5-47)||(25914930-25914971)
chr5 (3-68)||(38296208-38296273)
[»] chr4 (38 HSPs)
chr4 (1-75)||(50052456-50052530)
chr4 (1-76)||(48183077-48183152)
chr4 (1-75)||(480475-480549)
chr4 (1-75)||(29239884-29239958)
chr4 (1-70)||(6034047-6034116)
chr4 (1-70)||(11511490-11511559)
chr4 (1-82)||(23608226-23608307)
chr4 (1-70)||(41236350-41236419)
chr4 (5-70)||(50526203-50526268)
chr4 (1-70)||(54473561-54473630)
chr4 (6-68)||(40574784-40574846)
chr4 (8-68)||(55475196-55475256)
chr4 (1-75)||(42044395-42044469)
chr4 (1-70)||(3481657-3481726)
chr4 (7-68)||(31910197-31910258)
chr4 (77-179)||(2320119-2320219)
chr4 (8-78)||(29547994-29548064)
chr4 (1-70)||(29234273-29234342)
chr4 (1-76)||(29977882-29977957)
chr4 (1-75)||(24995135-24995209)
chr4 (8-68)||(8343198-8343258)
chr4 (8-68)||(19670751-19670811)
chr4 (8-68)||(55079749-55079809)
chr4 (8-53)||(17983778-17983823)
chr4 (8-68)||(32766963-32767023)
chr4 (8-68)||(47986213-47986273)
chr4 (8-68)||(50813927-50813987)
chr4 (77-147)||(31011039-31011107)
chr4 (5-76)||(47104541-47104612)
chr4 (2-68)||(53352595-53352660)
chr4 (1-65)||(28480296-28480360)
chr4 (1-65)||(28481171-28481235)
chr4 (1-65)||(28482046-28482110)
chr4 (5-68)||(18769114-18769177)
chr4 (8-53)||(18924530-18924575)
chr4 (1-29)||(41823926-41823954)
chr4 (8-68)||(44536781-44536840)
chr4 (5-77)||(48647758-48647830)
[»] chr7 (41 HSPs)
chr7 (1-82)||(7389380-7389461)
chr7 (4-70)||(19329845-19329911)
chr7 (1-75)||(19436215-19436289)
chr7 (1-70)||(3434565-3434634)
chr7 (1-72)||(3783996-3784067)
chr7 (1-70)||(36361941-36362010)
chr7 (5-68)||(35522881-35522944)
chr7 (1-75)||(8080411-8080485)
chr7 (1-70)||(4999542-4999611)
chr7 (1-70)||(35137536-35137605)
chr7 (1-70)||(36362029-36362098)
chr7 (1-70)||(38267043-38267112)
chr7 (5-68)||(46374834-46374897)
chr7 (1-75)||(38837215-38837289)
chr7 (1-75)||(40957705-40957779)
chr7 (3-68)||(21234406-21234471)
chr7 (1-73)||(3694367-3694439)
chr7 (12-75)||(35468894-35468957)
chr7 (5-68)||(39255955-39256018)
chr7 (1-68)||(8238217-8238285)
chr7 (7-75)||(10343597-10343665)
chr7 (8-68)||(22343366-22343426)
chr7 (8-68)||(32564461-32564521)
chr7 (5-68)||(18207185-18207248)
chr7 (5-68)||(46033833-46033896)
chr7 (2-68)||(40846142-40846208)
chr7 (3-68)||(38044202-38044267)
chr7 (8-68)||(41915746-41915806)
chr7 (17-68)||(31735889-31735940)
chr7 (24-75)||(11044186-11044237)
chr7 (5-68)||(26296649-26296712)
chr7 (1-70)||(32951521-32951590)
chr7 (8-68)||(36208178-36208238)
chr7 (8-68)||(41423687-41423747)
chr7 (9-68)||(2318279-2318338)
chr7 (4-75)||(45223040-45223111)
chr7 (91-129)||(12427672-12427710)
chr7 (4-70)||(32045840-32045906)
chr7 (5-47)||(42972977-42973018)
chr7 (116-169)||(33609065-33609118)
chr7 (8-68)||(7727911-7727971)
[»] chr2 (36 HSPs)
chr2 (1-74)||(28863454-28863527)
chr2 (1-76)||(9058477-9058552)
chr2 (1-73)||(19930848-19930920)
chr2 (2-70)||(40701481-40701549)
chr2 (1-76)||(10249410-10249485)
chr2 (5-68)||(40613934-40613997)
chr2 (1-79)||(28381683-28381761)
chr2 (1-75)||(33436128-33436202)
chr2 (1-70)||(7465763-7465832)
chr2 (1-70)||(17473023-17473092)
chr2 (1-70)||(32505676-32505745)
chr2 (1-75)||(20700813-20700887)
chr2 (1-75)||(30915461-30915535)
chr2 (1-70)||(5574516-5574585)
chr2 (1-70)||(13438346-13438415)
chr2 (5-70)||(33436214-33436279)
chr2 (2-70)||(4060688-4060756)
chr2 (5-68)||(42257198-42257261)
chr2 (4-70)||(27864707-27864773)
chr2 (1-75)||(38882842-38882915)
chr2 (3-68)||(38273172-38273237)
chr2 (3-68)||(2533129-2533193)
chr2 (4-79)||(17823778-17823853)
chr2 (8-68)||(17820039-17820099)
chr2 (8-68)||(26891539-26891599)
chr2 (8-68)||(43490126-43490186)
chr2 (8-68)||(45097770-45097830)
chr2 (8-70)||(41575140-41575202)
chr2 (8-53)||(2997522-2997567)
chr2 (5-68)||(36168841-36168904)
chr2 (116-169)||(38842998-38843051)
chr2 (8-68)||(15428775-15428835)
chr2 (8-68)||(38732359-38732419)
chr2 (12-67)||(3439985-3440040)
chr2 (8-53)||(13365373-13365418)
chr2 (262-359)||(16136855-16136950)
[»] chr3 (42 HSPs)
chr3 (1-77)||(11095381-11095457)
chr3 (1-75)||(49607412-49607486)
chr3 (2-76)||(54868924-54868998)
chr3 (1-70)||(53982014-53982083)
chr3 (1-68)||(52629305-52629372)
chr3 (1-70)||(33644203-33644272)
chr3 (5-68)||(26141564-26141627)
chr3 (1-75)||(27714919-27714993)
chr3 (1-70)||(17470408-17470477)
chr3 (1-70)||(31456692-31456761)
chr3 (5-70)||(35536629-35536694)
chr3 (1-77)||(33118879-33118955)
chr3 (8-70)||(14623874-14623936)
chr3 (5-79)||(24699986-24700060)
chr3 (1-70)||(8076396-8076465)
chr3 (2-75)||(36707453-36707526)
chr3 (1-69)||(48587119-48587187)
chr3 (5-68)||(11347954-11348017)
chr3 (5-68)||(41189796-41189859)
chr3 (5-70)||(8956765-8956830)
chr3 (5-70)||(13898087-13898152)
chr3 (5-68)||(20764947-20765010)
chr3 (5-68)||(47531870-47531933)
chr3 (5-68)||(51419392-51419455)
chr3 (8-68)||(26754700-26754760)
chr3 (1-69)||(30801761-30801829)
chr3 (83-146)||(37489887-37489948)
chr3 (5-76)||(35965806-35965877)
chr3 (10-70)||(41080712-41080771)
chr3 (8-68)||(45058588-45058647)
chr3 (8-66)||(35093592-35093650)
chr3 (4-70)||(21746212-21746280)
chr3 (5-73)||(25407179-25407248)
chr3 (109-169)||(20450617-20450677)
chr3 (8-51)||(36331364-36331407)
chr3 (80-169)||(42217788-42217875)
chr3 (89-146)||(44947157-44947212)
chr3 (1-70)||(9563002-9563071)
chr3 (11-68)||(36331416-36331473)
chr3 (8-68)||(11907376-11907436)
chr3 (8-68)||(25395368-25395428)
chr3 (3-47)||(52629951-52629994)
[»] chr8 (31 HSPs)
chr8 (1-76)||(14547919-14547994)
chr8 (1-70)||(504149-504218)
chr8 (1-70)||(5957833-5957902)
chr8 (1-70)||(37038482-37038551)
chr8 (1-70)||(1179968-1180037)
chr8 (3-68)||(10621117-10621182)
chr8 (1-70)||(12831050-12831119)
chr8 (1-70)||(15197336-15197405)
chr8 (1-70)||(23122625-23122694)
chr8 (1-79)||(34012324-34012402)
chr8 (3-68)||(15048212-15048276)
chr8 (1-70)||(40423971-40424040)
chr8 (5-70)||(20074966-20075031)
chr8 (1-70)||(44507115-44507184)
chr8 (5-68)||(43414613-43414676)
chr8 (10-76)||(4854900-4854966)
chr8 (8-68)||(16383382-16383442)
chr8 (10-82)||(24307830-24307902)
chr8 (8-68)||(34307221-34307281)
chr8 (1-68)||(10284659-10284726)
chr8 (1-53)||(8841460-8841512)
chr8 (8-68)||(30479509-30479569)
chr8 (4-75)||(42221513-42221584)
chr8 (10-68)||(24307634-24307692)
chr8 (83-146)||(13970102-13970163)
chr8 (8-68)||(16056436-16056496)
chr8 (1-68)||(17443830-17443897)
chr8 (8-68)||(32032730-32032789)
chr8 (35-70)||(9122198-9122233)
chr8 (1-68)||(14055620-14055687)
chr8 (18-68)||(25838202-25838252)
[»] chr1 (31 HSPs)
chr1 (1-75)||(2581913-2581987)
chr1 (4-70)||(27564766-27564832)
chr1 (1-70)||(9474904-9474973)
chr1 (1-70)||(44548404-44548473)
chr1 (1-70)||(48716310-48716379)
chr1 (1-70)||(51898711-51898780)
chr1 (1-75)||(8346416-8346490)
chr1 (1-70)||(3000322-3000391)
chr1 (5-68)||(32813252-32813315)
chr1 (1-75)||(38595152-38595226)
chr1 (1-75)||(38632349-38632423)
chr1 (5-70)||(37649201-37649266)
chr1 (1-70)||(47452348-47452417)
chr1 (3-68)||(49811557-49811622)
chr1 (1-76)||(26274429-26274504)
chr1 (3-79)||(45044590-45044666)
chr1 (5-75)||(23597123-23597193)
chr1 (1-70)||(43135-43204)
chr1 (1-70)||(11152406-11152474)
chr1 (1-70)||(41758808-41758877)
chr1 (1-70)||(50630461-50630530)
chr1 (8-68)||(41608528-41608588)
chr1 (8-68)||(50591035-50591095)
chr1 (286-364)||(14127049-14127127)
chr1 (5-66)||(26440741-26440802)
chr1 (8-68)||(5959035-5959095)
chr1 (5-68)||(37926470-37926533)
chr1 (1-43)||(13414791-13414833)
chr1 (8-68)||(44453984-44454044)
chr1 (77-121)||(31259543-31259587)
chr1 (8-68)||(47748448-47748507)
[»] chr6 (22 HSPs)
chr6 (1-71)||(22880686-22880756)
chr6 (1-79)||(32869672-32869750)
chr6 (1-80)||(6209493-6209572)
chr6 (5-70)||(17598557-17598622)
chr6 (5-68)||(31976253-31976316)
chr6 (6-76)||(28536519-28536589)
chr6 (1-70)||(31109428-31109497)
chr6 (1-70)||(11427619-11427690)
chr6 (2-70)||(29857830-29857898)
chr6 (1-75)||(15832575-15832649)
chr6 (8-70)||(31953065-31953127)
chr6 (4-68)||(31110792-31110854)
chr6 (8-68)||(15508059-15508119)
chr6 (8-68)||(15990077-15990137)
chr6 (8-68)||(30341395-30341455)
chr6 (1-75)||(23128155-23128229)
chr6 (1-66)||(946383-946448)
chr6 (5-68)||(4231553-4231616)
chr6 (5-75)||(12732480-12732550)
chr6 (5-68)||(9379744-9379807)
chr6 (8-70)||(22422053-22422115)
chr6 (77-169)||(20584427-20584517)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-70)||(957-1026)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-70)||(957-1026)
[»] scaffold0237 (1 HSPs)
scaffold0237 (2-70)||(4032-4100)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-68)||(10137-10204)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-68)||(8891-8958)
[»] scaffold0347 (1 HSPs)
scaffold0347 (77-146)||(11843-11910)
[»] scaffold0018 (1 HSPs)
scaffold0018 (8-53)||(152518-152563)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 1e-88; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 184 - 381
Target Start/End: Complemental strand, 28810133 - 28809931
Alignment:
Q  184 taaattggaattcaagaaatcaaatctcaaatcccagctaccaaatattattactactaaaacagatttaagatccacgttggggaagcaggcggtgtgg 283  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28810133 taaattgaaattcaagaaatcaaatctcaaatcccagctaccaaatattattactactaaaacagatttaagatccacgttggggaagcaggcggtgtgg 28810034  T
Q  284 -aaatactcacgcaacctgaatctttaatcgctagattattcaaagctag----atactttcccactagtgattactttgcagcagatttggcaaagtat 378  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  28810033 aaaatactcacgcaacctgaatctttaatcgctagattattcaaagctagatatatactttcccactagcgattactttgcagcagatttggcgaagtat 28809934  T
Q  379 gtg 381  Q
    |||    
T  28809933 gtg 28809931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 28812435 - 28812342
Alignment:
Q  74 ttaaaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28812435 ttaaaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataatt 28812342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18520912 - 18520986
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  18520912 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattctt 18520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2740346 - 2740277
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2740346 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 2740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 35785270 - 35785202
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  35785270 actacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 35785202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 28177843 - 28177780
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28177843 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 28177780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13811724 - 13811650
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||    
T  13811724 gactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactctt 13811650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 35943921 - 35943987
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  35943921 actacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcat 35943987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 6679766 - 6679703
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  6679766 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcat 6679703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33149666 - 33149744
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||| || |||||    
T  33149666 gactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaaa 33149744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36732970 - 36733044
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| ||||    
T  36732970 gactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14831886 - 14831817
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  14831886 gactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatta 14831817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40145479 - 40145410
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||||    
T  40145479 gactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcatta 40145410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42414330 - 42414399
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||    
T  42414330 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcatta 42414399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 15409640 - 15409705
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||    
T  15409640 ctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcat 15409705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 2252203 - 2252263
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  2252203 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 2252263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 36875644 - 36875700
Alignment:
Q  14 atttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 36875700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 26720584 - 26720521
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  26720584 acgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26720521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 26990333 - 26990270
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  26990333 acgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26990270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3921300 - 3921360
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  3921300 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 3921360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  10 tcagatttttgtgtgggtgtcaaatgg-tgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 33825356 - 33825421
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||||| ||||||||| |||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcatta 33825421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31009060 - 31008993
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||||||  ||   ||||||| ||||||||||||| ||||||||||    
T  31009060 gactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcat 31008993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 16327969 - 16327895
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    ||||||||||||||| ||||||||||||  | ||||||||||||||||||| | ||| |||||||| | ||||||    
T  16327969 acgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattacttttaaaa 16327895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 39688934 - 39689003
Alignment:
Q  10 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    |||||||||||||||||||||||  | ||||||||||| ||||| ||| |||||||||| | ||||||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactcttaaaa 39689003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 9603879 - 9603804
Alignment:
Q  7 gtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaataa 82  Q
    ||||||||||||||||| ||||| ||   |||||||  ||||||||||||| |||||||||||| |||||| ||||    
T  9603879 gtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactcttaatataa 9603804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 11100772 - 11100688
Alignment:
Q  83 cgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 169  Q
    |||||||||||||| |||||||||  ||||||||||| || |||| ||| ||||||| ||||||  || |||||| |||||||||||    
T  11100772 cgtttgagcttatagcttatcatt--ttttcttccatctttacccttattattttaactaaaacccatatttaccctttataattta 11100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 813816 - 813871
Alignment:
Q  108 tttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttat 163  Q
    ||||||||||| ||| |||| |||||| |||||||||| ||||||||||| |||||    
T  813816 tttttcttccaattttacccttatcatattaattaaaatttatgtttaccctttat 813871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 6260035 - 6260098
Alignment:
Q  7 gtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||| ||||||||| |||||||| ||| ||||||||| |||||| || ||| ||||||||||||    
T  6260035 gtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcatta 6260098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 21370052 - 21370014
Alignment:
Q  35 ggtgtattgccacctaaggatgtctatgtatcattattc 73  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  21370052 ggtgtattaccacctaaggatgtctatgtatcataattc 21370014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 25914971 - 25914930
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccac 47  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  25914971 acgtgtcagaattttgtgtgggtgt-aaatggtgtattgccac 25914930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 38296273 - 38296208
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||| ||||||||||||||| | ||  ||||||||| ||||||||   |||||||||||||    
T  38296273 ctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcat 38296208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50052456 - 50052530
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  50052456 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctt 50052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48183077 - 48183152
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||    
T  48183077 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactctta 48183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 480475 - 480549
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| ||||    
T  480475 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactctt 480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29239958 - 29239884
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  29239958 gactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactctt 29239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6034116 - 6034047
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  6034116 gactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 6034047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11511490 - 11511559
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  11511490 gactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 11511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23608307 - 23608226
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaataa 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| |||||||| |||||| ||||    
T  23608307 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactcttaatataa 23608226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41236419 - 41236350
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  41236419 gactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 41236350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 50526203 - 50526268
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  50526203 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatta 50526268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54473561 - 54473630
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  54473561 gactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcatta 54473630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 40574846 - 40574784
Alignment:
Q  6 cgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 40574784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 55475256 - 55475196
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcat 55475196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42044395 - 42044469
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||||||||||||||||||||||  || | ||||||||||||||||| |||||||||||||||| ||||    
T  42044395 gactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactctt 42044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3481726 - 3481657
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||||    
T  3481726 gactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcatta 3481657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 31910258 - 31910197
Alignment:
Q  7 gtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  31910258 gtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcat 31910197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 2320119 - 2320219
Alignment:
Q  77 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataatttaaaacaaa 176  Q
    ||||| ||||||| |||||||||||||| |  |||||||| ||||| | || |||||||||||| |||||| ||||||||  ||||||||||||||||||    
T  2320119 aaatagcgtttgaccttataacttatcact--ttttcttcaatttttatccttatcattttaatcaaaactcatgtttactctttataatttaaaacaaa 2320216  T
Q  177 aag 179  Q
    |||    
T  2320217 aag 2320219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 29547994 - 29548064
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaa 78  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||| |||||||||| | |||||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactcttaaa 29548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29234273 - 29234342
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||  ||| ||||| |||||||||||| |||||| ||||||||||||||||    
T  29234273 gactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcatta 29234342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29977957 - 29977882
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||| || | | |||||||||||| |||||    
T  29977957 gactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactctta 29977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24995135 - 24995209
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||| |||||| |||| || |||||||| ||||    
T  24995135 gactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 8343198 - 8343258
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||| ||| ||||||||| | ||||||||||||||||||||| ||||||||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcat 8343258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 19670751 - 19670811
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||| ||| ||||||||||    
T  19670751 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 19670811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 55079749 - 55079809
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcat 55079809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 17983778 - 17983823
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 53  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  17983778 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 32767023 - 32766963
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||  ||| ||||||||||    
T  32767023 tgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcat 32766963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 47986273 - 47986213
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||| ||| ||||||||||    
T  47986273 tgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcat 47986213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 50813927 - 50813987
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  |||||||| |||||||||  ||| ||||||||||    
T  50813927 tgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcat 50813987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 31011039 - 31011107
Alignment:
Q  77 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaact 147  Q
    ||||| ||||| |||||||||||| |||||  ||||||||||| || |||| |||||||||||||||||||    
T  31011039 aaatatcgtttaagcttataacttctcatt--ttttcttccatatttacccttatcattttaattaaaact 31011107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 47104612 - 47104541
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    |||||||| |||||||||||||||||| |  |||||||| || ||||| |||||||| |||||||| |||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactctta 47104541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 53352595 - 53352660
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||| ||||| |||   ||||||| ||||||||| ||||||||||||||    
T  53352595 actacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28480296 - 28480360
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtat 65  Q
    |||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||    
T  28480296 gactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28481171 - 28481235
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtat 65  Q
    |||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||    
T  28481171 gactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28482046 - 28482110
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtat 65  Q
    |||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||    
T  28482046 gactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 18769177 - 18769114
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| | | ||||||| |  || ||||||||| ||||||||||    
T  18769177 acgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 18924530 - 18924575
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 53  Q
    |||||||||||||||||| | ||||  |||||||||||||||||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagg 18924575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 41823954 - 41823926
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgt 29  Q
    |||||||||||||||||||||||||||||    
T  41823954 gactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 44536781 - 44536840
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||| |||| || |||||||||||||||||   ||| ||||||||||    
T  44536781 tgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcat 44536840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 48647758 - 48647830
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaa 77  Q
    |||||| |||||||| ||||||||| ||  |||||||||  |||||||||||| ||||| |||| | ||||||    
T  48647758 acgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactcttaa 48647830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7389461 - 7389380
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaataa 82  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||    
T  7389461 gactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactcttaaaataa 7389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 19329911 - 19329845
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19329911 tacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatta 19329845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19436215 - 19436289
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  19436215 gactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3434634 - 3434565
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3434634 gactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 3434565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3784067 - 3783996
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattatt 72  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  3784067 gactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattatt 3783996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36361941 - 36362010
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  36361941 gactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcatta 36362010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 35522944 - 35522881
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  35522944 acgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8080411 - 8080485
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  8080411 gactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4999542 - 4999611
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  4999542 gactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 4999611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35137605 - 35137536
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  35137605 gactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcatta 35137536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36362098 - 36362029
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||||    
T  36362098 gactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcatta 36362029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38267112 - 38267043
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||    
T  38267112 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcatta 38267043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 46374834 - 46374897
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  46374834 acgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcat 46374897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38837289 - 38837215
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||| |||||  || ||||||||||||||||||| |||||||||||||||| ||||    
T  38837289 gactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactctt 38837215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40957779 - 40957705
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||||||  |||||||||||||||| ||||    
T  40957779 gactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactctt 40957705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 21234471 - 21234406
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  21234471 ctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcat 21234406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3694439 - 3694367
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattc 73  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||| ||| |||||||||||    
T  3694439 gactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcattattc 3694367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 35468894 - 35468957
Alignment:
Q  12 agatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactctt 35468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 39255955 - 39256018
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||    
T  39255955 acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcat 39256018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8238285 - 8238217
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta-aggatgtctatgtatcat 68  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||    
T  8238285 gactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcat 8238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 10343597 - 10343665
Alignment:
Q  7 gtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||   ||||||| |||||||||| |||||||||||||||| ||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactctt 10343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 22343426 - 22343366
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  22343426 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 22343366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 32564461 - 32564521
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcat 32564521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 18207248 - 18207185
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||| |||||||||| ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  18207248 acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcat 18207185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 46033833 - 46033896
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||| ||||||||| ||| |||||||||||||||||| || ||||||||||||    
T  46033833 acgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcat 46033896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 40846142 - 40846208
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||| ||| |||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  40846142 actacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcat 40846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 38044267 - 38044202
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||||||| ||| ||||||||||    
T  38044267 ctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcat 38044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 41915806 - 41915746
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||    
T  41915806 tgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 41915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 31735940 - 31735889
Alignment:
Q  17 tttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcat 31735889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 11044237 - 11044186
Alignment:
Q  24 gggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||| ||||    
T  11044237 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactctt 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 26296712 - 26296649
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||| |||||||||| ||||| ||| ||| ||| ||||| ||||||||||||||||||||||||    
T  26296712 acgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcat 26296649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32951521 - 32951590
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||| |||||||||||||| ||| ||| | ||||||| || |||||  ||||||||||||||||    
T  32951521 gactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcatta 32951590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 36208238 - 36208178
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||| ||||||||||||||||||    |||||| |||||||||| ||||||||||||||    
T  36208238 tgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcat 36208178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 41423747 - 41423687
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||  |||||||  |||||||| ||| |||| ||||||||||||||||    
T  41423747 tgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcat 41423687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 2318279 - 2318338
Alignment:
Q  9 gtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||  ||||| |||||||||| || |||  |||||||||    
T  2318279 gtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 45223111 - 45223040
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||||||||||||| | |||  ||   ||||||||||||||||||||| ||| |||||||| ||||    
T  45223111 tacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactctt 45223040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 12427672 - 12427710
Alignment:
Q  91 cttataacttatcattatttttcttccattttaacccat 129  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  12427672 cttataacttatcattctttttcttccatttttacccat 12427710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 32045906 - 32045840
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||| |||||||||| | |  | |||||||||||||| || | ||||||||||||    
T  32045906 tacgtgtcagatttttatgtgggtgtccagtaatatattgccacctaagaatatatatgtatcatta 32045840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 42972977 - 42973018
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccac 47  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  42972977 acgtgtcagaattttgtgtgggtgt-aaatggtgtattgccac 42973018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 33609118 - 33609065
Alignment:
Q  116 ccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 169  Q
    ||||||| |||| ||| ||||||||||||||  ||||||||| |||||||||||    
T  33609118 ccatttttacccttattattttaattaaaacccatgtttaccctttataattta 33609065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 7727971 - 7727911
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||| ||||  ||||||  |||||||| |||||||||| ||| ||||||||||    
T  7727971 tgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcat 7727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28863527 - 28863454
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattct 74  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  28863527 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattct 28863454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9058552 - 9058477
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  9058552 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctta 9058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19930848 - 19930920
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattc 73  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19930848 gactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcattattc 19930920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 40701549 - 40701481
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  40701549 actacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 40701481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10249410 - 10249485
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||    
T  10249410 gactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactctta 10249485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 40613934 - 40613997
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40613934 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 40613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28381683 - 28381761
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| || |||||    
T  28381683 gactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcataaaa 28381761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33436128 - 33436202
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  33436128 gactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 33436202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7465763 - 7465832
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  7465763 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatta 7465832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17473092 - 17473023
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  17473092 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatta 17473023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32505676 - 32505745
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  32505676 gactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatta 32505745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20700887 - 20700813
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  20700887 gactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactctt 20700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30915535 - 30915461
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  30915535 gactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5574516 - 5574585
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  5574516 gactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatta 5574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13438415 - 13438346
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||    
T  13438415 gactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcatta 13438346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 33436279 - 33436214
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcatta 33436214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 4060756 - 4060688
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||    
T  4060756 actacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatta 4060688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 42257261 - 42257198
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  42257261 acgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcat 42257198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 27864773 - 27864707
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||||||||||||    
T  27864773 tacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcatta 27864707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 38882842 - 38882915
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||| ||||    
T  38882842 gactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactctt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 38273172 - 38273237
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||||    
T  38273172 ctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcat 38273237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 2533193 - 2533129
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||    
T  2533193 ctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcat 2533129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 17823853 - 17823778
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    ||||||||||||||||||||||||||  |    ||||||||||||||||||||| |||||||||||| ||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactcttaaaa 17823778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 17820039 - 17820099
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||  | ||||||||||||||    
T  17820039 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcat 17820099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 26891539 - 26891599
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||| || |||||||||||    
T  26891539 tgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcat 26891599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 43490186 - 43490126
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  43490186 tgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcat 43490126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 45097770 - 45097830
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||    
T  45097770 tgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 45097830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 41575202 - 41575140
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||| |||||||||||  ||||||| |||||||| ||| |||||||||||||||||||||||    
T  41575202 tgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcatta 41575140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 2997522 - 2997567
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 53  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  2997522 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 36168904 - 36168841
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||| ||||||||||||| || ||| | ||||||| || |||||||||||||||||||||    
T  36168904 acgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcat 36168841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 38842998 - 38843051
Alignment:
Q  116 ccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 169  Q
    ||||||| |||||||| ||||||||||||| | ||||||||| |||||||||||    
T  38842998 ccatttttacccatattattttaattaaaattcatgtttaccctttataattta 38843051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 15428775 - 15428835
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||| |||| ||  ||||||| ||||| ||||||||| ||||||||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcat 15428835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 38732419 - 38732359
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  | ||||||| ||| ||||| ||| ||||||||||    
T  38732419 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcat 38732359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 3440040 - 3439985
Alignment:
Q  12 agatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatca 67  Q
    ||||||||||||||||||| |   |||||||||||||||||| |||||| ||||||    
T  3440040 agatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 13365418 - 13365373
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 53  Q
    |||||||||||||||||||||||||  ||| |||||||| ||||||    
T  13365418 tgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 16136950 - 16136855
Alignment:
Q  262 gttggggaagcaggcggtgtggaa-atactcacgcaacctgaatctttaatcgctagattattcaaagctagatactttcccactagtgattactttgc 359  Q
    ||||||||||||||||   ||||| || |||||||| ||| ||||  | ||| ||||  |||||||||||||||| || || |||||||||||||||||    
T  16136950 gttggggaagcaggcg---tggaagattctcacgcaccctaaatccatgatcactaggctattcaaagctagatatttccctactagtgattactttgc 16136855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11095381 - 11095457
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaa 77  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  11095381 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttaa 11095457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 49607486 - 49607412
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  49607486 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 49607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 54868924 - 54868998
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  54868924 actacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactctta 54868998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 53982083 - 53982014
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  53982083 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 53982014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52629372 - 52629305
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  52629372 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33644272 - 33644203
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  33644272 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcatta 33644203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 26141564 - 26141627
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  26141564 acgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26141627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27714919 - 27714993
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||| ||||    
T  27714919 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17470477 - 17470408
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||||    
T  17470477 gactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcatta 17470408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31456761 - 31456692
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||    
T  31456761 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcatta 31456692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 35536694 - 35536629
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35536694 acgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcatta 35536629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33118879 - 33118955
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaa 77  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| | ||||||    
T  33118879 gactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactcttaa 33118955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 14623874 - 14623936
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  14623874 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcatta 14623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 24699986 - 24700060
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    ||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| ||||    
T  24699986 acgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactctaaaaa 24700060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8076465 - 8076396
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||    
T  8076465 gactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcatta 8076396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 36707453 - 36707526
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||| | |||||||||||||| ||||    
T  36707453 actacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactctt 36707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48587119 - 48587187
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatt 69  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| | |||||||||||||    
T  48587119 gactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 11347954 - 11348017
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||    
T  11347954 acgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcat 11348017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 41189796 - 41189859
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  41189796 acgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcat 41189859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 8956830 - 8956765
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||| |||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  8956830 acgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcatta 8956765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 13898087 - 13898152
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||| ||||||||    
T  13898087 acgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcatta 13898152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 20764947 - 20765010
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||| ||||    
T  20764947 acgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcat 20765010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 47531933 - 47531870
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||| |||||||| ||| ||| |||||||||||| |||||||||||||||||||||    
T  47531933 acgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcat 47531870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 51419392 - 51419455
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| ||| | ||||||| || |||||||||||||||||||||    
T  51419392 acgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcat 51419455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 26754760 - 26754700
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||| |||| || ||||||||||||||||||| |||||||| |||||    
T  26754760 tgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30801761 - 30801829
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatt 69  Q
    |||||| ||||| |||||||||||||| ||||| ||||||||  ||||||||| |||||||||||||||    
T  30801761 gactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 37489948 - 37489887
Alignment:
Q  83 cgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 146  Q
    |||||||||||||| ||| |||||  ||||||||||||||||||| ||||||||||||||||||    
T  37489948 cgtttgagcttatagcttctcatt--ttttcttccattttaacccttatcattttaattaaaac 37489887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 35965806 - 35965877
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    ||||||||||||||| ||||||||||||| | ||||||  ||| ||||||||| |||||||||||| |||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactctta 35965877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 41080771 - 41080712
Alignment:
Q  10 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||| |||||||||||| ||||| |||| || ||||||||||||||||||||||    
T  41080771 tcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtatcatta 41080712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 45058588 - 45058647
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  45058588 tgtcagatttttatgtgggtgtcaag-ggtgtattgccacctaagggtgtttatgtatcat 45058647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 35093650 - 35093592
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatc 66  Q
    ||||||||||||| |||| ||||||||| ||||||| ||||||| | ||||||||||||    
T  35093650 tgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 21746212 - 21746280
Alignment:
Q  4 tacgtgtcagatttttgtgtggg--tgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||  |||| |    ||||||||||||||||||||| ||||||||||||    
T  21746212 tacgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcatta 21746280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 25407179 - 25407248
Alignment:
Q  5 acgtgtcagattttt-gtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattc 73  Q
    ||||||||||||||| ||||| |||||||  ||| |||||||||||| || ||| |||||||||||||||    
T  25407179 acgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcattattc 25407248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 20450617 - 20450677
Alignment:
Q  109 ttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 169  Q
    |||| ||||||||  |||| ||| |||||||||||||||||| |||||| |||||||||||    
T  20450617 ttttattccatttctacccttattattttaattaaaacttatatttaccctttataattta 20450677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 36331364 - 36331407
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaa 51  Q
    |||||||||||||||||||||||||  |||| ||||||||||||    
T  36331364 tgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 42217788 - 42217875
Alignment:
Q  80 taacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 169  Q
    ||||||||||||||||| ||| ||||  ||| |||  |||||| |||| ||| |||||||||||||   ||||||||| |||||||||||    
T  42217788 taacgtttgagcttatagcttctcatattttatct--catttttacccttattattttaattaaaatccatgtttaccctttataattta 42217875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 44947212 - 44947157
Alignment:
Q  89 agcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 146  Q
    |||||||| ||||||||   |||||||||||||| |||| ||||||||||||||||||    
T  44947212 agcttatagcttatcatc--ttttcttccatttttacccttatcattttaattaaaac 44947157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9563071 - 9563002
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||| | ||| ||||||| | ||||||| || |||| | ||| ||||||||||||    
T  9563071 gactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcatta 9563002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 36331416 - 36331473
Alignment:
Q  11 cagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||| ||||||  |||| ||||||| |||||| ||| ||||||||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcat 36331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 11907436 - 11907376
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||| ||||  |   |||||||| ||||||||| ||||||||||||||    
T  11907436 tgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcat 11907376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 25395368 - 25395428
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||| | ||  | ||||| ||||| ||||||||| ||||||||||    
T  25395368 tgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcat 25395428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 52629951 - 52629994
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccac 47  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||    
T  52629951 ctacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14547994 - 14547919
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  14547994 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactctta 14547919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 504149 - 504218
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  504149 gactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 504218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5957902 - 5957833
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5957902 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcatta 5957833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37038551 - 37038482
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  37038551 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatta 37038482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1179968 - 1180037
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  1179968 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatta 1180037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 10621117 - 10621182
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  10621117 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12831119 - 12831050
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  12831119 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatta 12831050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15197405 - 15197336
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  15197405 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatta 15197336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23122625 - 23122694
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  23122625 gactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcatta 23122694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34012324 - 34012402
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||| || |||||    
T  34012324 gactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaaa 34012402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 15048212 - 15048276
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  15048212 ctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 15048276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40423971 - 40424040
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  40423971 gactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcatta 40424040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 20074966 - 20075031
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||| |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcatta 20075031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44507115 - 44507184
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||| |||  ||||||| |||||||||| ||||||||||||||||    
T  44507115 gactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcatta 44507184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 43414613 - 43414676
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||| |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  43414613 acgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcat 43414676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 4854900 - 4854966
Alignment:
Q  10 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    |||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactctta 4854966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16383442 - 16383382
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  16383442 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 16383382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 24307830 - 24307902
Alignment:
Q  10 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaataa 82  Q
    |||||||||||||||||||||||  | ||||||||||||||||| ||| |||||||||| | |||||||||||    
T  24307830 tcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactcttaaaataa 24307902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 34307281 - 34307221
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 34307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10284659 - 10284726
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||| ||||||||||||||||||||  |||||||| ||| ||||| ||||||||||||||    
T  10284659 gactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8841460 - 8841512
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 53  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  8841460 gactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30479509 - 30479569
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||| ||| ||||||||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcat 30479569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 42221584 - 42221513
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||| |    ||||||| ||||||||||||| |||||||||||| ||||    
T  42221584 tacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 24307692 - 24307634
Alignment:
Q  10 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||  | ||||||||||||||||| ||| ||||||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcat 24307634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 13970102 - 13970163
Alignment:
Q  83 cgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 146  Q
    |||||||||||||| ||||||||   |||||||||||||| |||| ||||||||||||||||||    
T  13970102 cgtttgagcttatagcttatcata--ttttcttccatttttacccttatcattttaattaaaac 13970163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 16056436 - 16056496
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  | ||||||| ||| ||||||||| ||||||||||    
T  16056436 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcat 16056496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17443897 - 17443830
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||||||    
T  17443897 gactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcat 17443830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 32032789 - 32032730
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||| ||| ||||||||||    
T  32032789 tgtcagatttttgtgtggatgtcaag-gatgtattgccacctaagggtgtttatgtatcat 32032730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 70
Target Start/End: Complemental strand, 9122233 - 9122198
Alignment:
Q  35 ggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9122233 ggtgtattgccacctaagggtgtctatgtatcatta 9122198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14055620 - 14055687
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||| ||| |||||||||||||| ||||||   |||||||| ||||||||| |||| |||||||||    
T  14055620 gactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcat 14055687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 25838252 - 25838202
Alignment:
Q  18 ttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||| |||||||  |||||||||||||||||||| ||||| ||||||    
T  25838252 ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcat 25838202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2581987 - 2581913
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  2581987 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 2581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 27564766 - 27564832
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27564766 tacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatta 27564832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9474904 - 9474973
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  9474904 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 9474973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44548404 - 44548473
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  44548404 gactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48716310 - 48716379
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  48716310 gactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcatta 48716379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51898711 - 51898780
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  51898711 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatta 51898780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8346416 - 8346490
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| ||||    
T  8346416 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactctt 8346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3000391 - 3000322
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  3000391 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 3000322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 32813315 - 32813252
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  32813315 acgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 32813252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38595226 - 38595152
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| |||||||||||| ||||    
T  38595226 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactctt 38595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 38632349 - 38632423
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||| ||||    
T  38632349 gactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 37649266 - 37649201
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  37649266 acgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcatta 37649201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47452348 - 47452417
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  47452348 gactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatta 47452417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 49811557 - 49811622
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  49811557 ctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcat 49811622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26274504 - 26274429
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    ||||| ||||||||||||| ||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  26274504 gactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcattattctta 26274429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 45044590 - 45044666
Alignment:
Q  3 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||| | ||||||||    
T  45044590 ctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactcttaaaa 45044666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 23597123 - 23597193
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||| |||||||||||||||||| ||||    
T  23597123 acgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactctt 23597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43204 - 43135
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| | ||||||| | ||||||  ||||||||||||||||    
T  43204 gactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcatta 43135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11152406 - 11152474
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||| ||||||    
T  11152406 gactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg-tgtctatgtttcatta 11152474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41758877 - 41758808
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||  ||| | ||||||||||||||||    
T  41758877 gactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcatta 41758808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50630530 - 50630461
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||  |||| | ||||||||||||||||| | ||||||||||||||    
T  50630530 gactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcatta 50630461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 41608528 - 41608588
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 41608588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 50591035 - 50591095
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  50591035 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 50591095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 14127049 - 14127127
Alignment:
Q  286 atactcacgcaacctgaatctttaatcgctagattattcaaagctagatactttcccactagtgattactttgcagcag 364  Q
    ||||||||| |||||| |||||||||| ||||| || |||||||||||||||| |||| ||||||||| ||||| ||||    
T  14127049 atactcacgtaacctggatctttaatcactagactactcaaagctagatacttccccaatagtgattattttgctgcag 14127127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 26440802 - 26440741
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatc 66  Q
    ||||||||||||||||||||||||| ||| ||||||||| || |||||||||||||| ||||    
T  26440802 acgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 5959035 - 5959095
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| ||| ||||||||||    
T  5959035 tgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcat 5959095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 37926470 - 37926533
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||||||| ||| ||||||||||||    
T  37926470 acgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcat 37926533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13414833 - 13414791
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattg 43  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  13414833 gactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 44454044 - 44453984
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||| ||||  | ||||||||||| ||| | ||||||||||||||    
T  44454044 tgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 31259587 - 31259543
Alignment:
Q  77 aaataacgtttgagcttataacttatcattatttttcttccattt 121  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  31259587 aaatagcgtttgagcttatagcttatcattttttttcttctattt 31259543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 47748507 - 47748448
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||| | ||||||||||  ||||||||||||||||||| | | ||||||||||    
T  47748507 tgtcagatttttatatgggtgtcaag-ggtgtattgccacctaagggtatttatgtatcat 47748448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 7e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22880686 - 22880756
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattat 71  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  22880686 gactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattat 22880756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32869750 - 32869672
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 79  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| || |||||    
T  32869750 gactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactcataaaa 32869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6209493 - 6209572
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaat 80  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||| ||||    
T  6209493 gactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactctttaaat 6209572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 17598622 - 17598557
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  17598622 acgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 17598557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 31976316 - 31976253
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  31976316 acgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcat 31976253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 28536519 - 28536589
Alignment:
Q  6 cgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctta 76  Q
    |||||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||| ||||||    
T  28536519 cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatttttctta 28536589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31109428 - 31109497
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||  |||||||    
T  31109428 gactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcatta 31109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11427690 - 11427619
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta--aggatgtctatgtatcatta 70  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||  ||| ||||||||||||||||    
T  11427690 gactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcatta 11427619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 29857898 - 29857830
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||| | ||||||||||||||||    
T  29857898 actacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatta 29857830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15832649 - 15832575
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    |||||||||||| |||||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| ||||    
T  15832649 gactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactctt 15832575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 31953065 - 31953127
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  31953065 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcatta 31953127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 31110792 - 31110854
Alignment:
Q  4 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||    
T  31110792 tacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 31110854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 15508059 - 15508119
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  15508059 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 15990077 - 15990137
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  15990077 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15990137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30341395 - 30341455
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  30341395 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 30341455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23128155 - 23128229
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||||||| | ||||||  ||| ||| | ||||||| |||||||||||||    
T  23128155 gactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcattattctt 23128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 946448 - 946383
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatc 66  Q
    ||||| |||||||||||||| || ||||||||| ||||||||  ||||||||||||||||||||||    
T  946448 gactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 4231616 - 4231553
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||| ||||| |||| |||||    
T  4231616 acgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcat 4231553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 12732550 - 12732480
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 75  Q
    ||||||||||||||||||||||||||||    | ||||||||| |||| ||||||||||||||||| ||||    
T  12732550 acgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactctt 12732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 9379744 - 9379807
Alignment:
Q  5 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    |||||||| |||||||| ||||||||||  | ||||||| || |||||||||||||||||||||    
T  9379744 acgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 22422053 - 22422115
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||| |||||| || |||||||  | | ||||||||||||||||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcatta 22422115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 20584427 - 20584517
Alignment:
Q  77 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 169  Q
    |||||||||||||| |||||| |||||||  ||||||||||| ||| |||  | | ||||||  ||||| |||| ||||||| ||||||||||    
T  20584427 aaataacgtttgagtttataatttatcat--tttttcttccaattttacctttgttattttatctaaaatttatttttacctattataattta 20584517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 957 - 1026
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||| ||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||    
T  957 gactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatta 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 957 - 1026
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    ||||||||||||| ||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||    
T  957 gactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatta 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 4100 - 4032
Alignment:
Q  2 actacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 70  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||| | ||||||||||||||||    
T  4100 actacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatta 4032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10137 - 10204
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||||||||||||||||| ||||| ||||||| | ||||||||||||||| | ||||||||||||||    
T  10137 gactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcat 10204  T

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Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8891 - 8958
Alignment:
Q  1 gactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 68  Q
    ||||| |||||| |||||||||| | |||||||| |||||||| ||| ||||||||||||| ||||||    
T  8891 gactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcat 8958  T

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Target: scaffold0347 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 11843 - 11910
Alignment:
Q  77 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 146  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||| | || ||||||||| ||||||||    
T  11843 aaatagcgtttgagcttataacttatcat--tttttattccatttttatccttatcatttttattaaaac 11910  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 152563 - 152518
Alignment:
Q  8 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 53  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||    
T  152563 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

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