View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18007_low_42 (Length: 354)
Name: NF18007_low_42
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18007_low_42 |
 | |
|
| [»] chr7 (4 HSPs) |
| |
|
| [»] chr3 (10 HSPs) |
| |
|
| [»] scaffold0252 (1 HSPs) |
| | |
|
| [»] chr8 (4 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] scaffold0011 (1 HSPs) |
| | |
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| [»] scaffold0381 (1 HSPs) |
| | |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 4646615 - 4646953
Alignment:
| Q |
16 |
tcaacctgttcactagtactttagaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttgg |
115 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4646615 |
tcaacctgttcgctagtactttagaaacaattttatatagcacattgaacagtgctattgaccgccaatctttcatgctaacctgcgtagaaccttttgg |
4646714 |
T |
|
| Q |
116 |
aataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacattcataaaaatgtcatcactgcataaattccaaa |
215 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4646715 |
aataagggcaatgttagtaatatttaaatcagggggaaactgtcccgtgtctagccaaccacaacattcctaaaaatgtcatcactgcataaattccaaa |
4646814 |
T |
|
| Q |
216 |
agtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatctcgaaacccggccttagtaaaaggtgc |
315 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4646815 |
agtattggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatctcgaaactcggccttagtaaaaggtgt |
4646914 |
T |
|
| Q |
316 |
cgcgagcataacataatcatgagcagagatagacggatt |
354 |
Q |
| |
|
|| ||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
4646915 |
cgtgagaataatataatcatgaacagagatagacggatt |
4646953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 41598642 - 41598303
Alignment:
| Q |
16 |
tcaacctgttcactagtactttagaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttgg |
115 |
Q |
| |
|
|||||||||| ||| |||||||| | ||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||| || |
|
|
| T |
41598642 |
tcaacctgtttgctaacactttagatataattttatataacacattgcatagtgctattggccgccaatctttcatactaacctgcgtggaacctttagg |
41598543 |
T |
|
| Q |
116 |
aataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacattcataaaa-atgtcatcactgcataaattccaa |
214 |
Q |
| |
|
|||||| | |||||||||||||||||||||||| |||| ||||| | ||| ||||||||||||||| | || |||||||| ||||||||||||||| |
|
|
| T |
41598542 |
aataagtgcaatgttagtaatatttaaatcaggtggaaattgtcctgcatctgaccaaccacaacattccttgaagatgtcatcgctgcataaattccaa |
41598443 |
T |
|
| Q |
215 |
aagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatctcgaaacccggccttagtaaaaggtg |
314 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||| | || ||||| || ||||||||||||||| | |||||| ||||||||||||| |||| |
|
|
| T |
41598442 |
aattgttggtaaaaacccggactatatccatcagggccggagcatttatccgggtgtatagagaaaatagcaacacgaaactcggccttagtaaatggtg |
41598343 |
T |
|
| Q |
315 |
ccgcgagcataacataatcatgagcagagatagacggatt |
354 |
Q |
| |
|
||| || | | ||| ||||||| |||||||||||||||| |
|
|
| T |
41598342 |
ccgtaagtagatcattatcatgaacagagatagacggatt |
41598303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 309
Target Start/End: Original strand, 17245007 - 17245301
Alignment:
| Q |
16 |
tcaacctgttcactagtactttagaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttgg |
115 |
Q |
| |
|
|||||||||| | ||||| || |||| ||||||||| | ||||| || ||||| || || |||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
17245007 |
tcaacctgtttgcgagtaccttggaaataattttatacaagacattacaaagtgctatagggcgccaatccttcatactaacctgcgtagaaccttttgg |
17245106 |
T |
|
| Q |
116 |
aataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacattcat-aaaaatgtcatcactgcataaattccaa |
214 |
Q |
| |
|
|||||| | ||||||||||||||| |||||||| | || |||||||| |||| |||| |||||||||| | ||||| || || ||||||||||||||| |
|
|
| T |
17245107 |
aataagagcaatgttagtaatattcaaatcaggagggaattgtcccgtatctaaccaagcacaacattccttaaaaacatcgtcgctgcataaattccaa |
17245206 |
T |
|
| Q |
215 |
aagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatctcgaaacccggccttagtaaa |
309 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| ||||| || || ||||||| ||||| |
|
|
| T |
17245207 |
aagtgctgataaaaacccggattatagccatcaggaccggagcacttgtccggatgcatagagaaaattgcatcacggaattcggccttggtaaa |
17245301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 60 - 288
Target Start/End: Original strand, 3207585 - 3207813
Alignment:
| Q |
60 |
ttgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtc |
159 |
Q |
| |
|
||||| ||||| || |||||||| |||||||||||||||||| | ||| ||||||||||||| | ||||||||||| ||||||||||||| |||| |||| |
|
|
| T |
3207585 |
ttgcatagtgcgataggccgccagtctttcatgctaacctgcatggaaacttttggaataagtgcaatgttagtaaaatttaaatcagggggaaa-tgtc |
3207683 |
T |
|
| Q |
160 |
ccgtgtctagccaaccacaacattca-taaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagta |
258 |
Q |
| |
|
||||||| |||||||||||| ||||| ||||||| |||||||| |||||||||||||| ||||||||||||| |||| | || |||||||| || | | |
|
|
| T |
3207684 |
ccgtgtcgagccaaccacaatattcattaaaaatatcatcactacataaattccaaaaatgttggtaaaaactcggattgtacccatcaggacctaaaca |
3207783 |
T |
|
| Q |
259 |
cttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||| |||||||||||||||||||| ||||| |
|
|
| T |
3207784 |
cttctccggatgcatagagaaaattgcatc |
3207813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 168; Significance: 5e-90; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 8563608 - 8563269
Alignment:
| Q |
16 |
tcaacctgttcactagtactttagaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttgg |
115 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||| || |
|
|
| T |
8563608 |
tcaacctgtttgctaacactttagaaataattttatataaaacattgcaaagtgctattggccgccaatccttcatgctaacctgcgaagaacctttagg |
8563509 |
T |
|
| Q |
116 |
aataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacatt-cataaaaatgtcatcactgcataaattccaa |
214 |
Q |
| |
|
|||||| | |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||| |||| |
|
|
| T |
8563508 |
aataagtgcaatgttagtaatatttaaatcaggtggaaactgtcctgtgtcaagccaaccacaacattccttgaagatgtcatcgctgcataaatgccaa |
8563409 |
T |
|
| Q |
215 |
aagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatctcgaaacccggccttagtaaaaggtg |
314 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| | ||||| |||||||||| ||||||| |
|
|
| T |
8563408 |
aaatgttggtaaaaacccggactataaccatcagggccggaacatttgtccggatgcatagagaaaatagcaacacgaaattcggccttagtgaaaggtg |
8563309 |
T |
|
| Q |
315 |
ccgcgagcataacataatcatgagcagagatagacggatt |
354 |
Q |
| |
|
||| || | ||| ||||| |||||||||||||||||| |
|
|
| T |
8563308 |
ccgtaagaaggtcattatcattagcagagatagacggatt |
8563269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 44 - 301
Target Start/End: Original strand, 31663496 - 31663758
Alignment:
| Q |
44 |
aattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaa |
143 |
Q |
| |
|
||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||| |
|
|
| T |
31663496 |
aattttatataacacattgcatagtgctattggccgccaatctttcatgctaacctgcgtagaacctttaggaataagtgcaatgttagtaatatttaac |
31663595 |
T |
|
| Q |
144 |
tcagggagaaactgtcccgtgtctagccaaccacaacatt-cataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagc |
242 |
Q |
| |
|
||||| |||| |||| || ||||||||||||||||||| | | || ||||||||||| |||||||||||||| ||||| || |||||||||||||| | |
|
|
| T |
31663596 |
tcaggtggaaattgtcgtgtatctagccaaccacaacattccttgaagatgtcatcactacataaattccaaaaatgttgatagaaacccggactatatc |
31663695 |
T |
|
| Q |
243 |
catcagggccggag----tacttgtccggatgcatagagaaaatagcatctcgaaacccggcc |
301 |
Q |
| |
|
|||| |||||||| | ||||||||||||||||||||||| ||| |||||||| ||||| |
|
|
| T |
31663696 |
catcgaggccggagcatttgattgtccggatgcatagagaaaatggcagctcgaaactcggcc |
31663758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 44 - 301
Target Start/End: Complemental strand, 31932900 - 31932638
Alignment:
| Q |
44 |
aattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaa |
143 |
Q |
| |
|
||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||| |
|
|
| T |
31932900 |
aattttatataacacattgcatagtgctattggccgccaatctttcatgctaacctgcgtagaacctttaggaataagtgcaatgttagtaatatttaac |
31932801 |
T |
|
| Q |
144 |
tcagggagaaactgtcccgtgtctagccaaccacaacatt-cataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagc |
242 |
Q |
| |
|
||||| |||| |||| || ||||||||||||||||||| | | || ||||||||||| |||||||||||||| ||||| || |||||||||||||| | |
|
|
| T |
31932800 |
tcaggtggaaattgtcgtgtatctagccaaccacaacattccttgaagatgtcatcactacataaattccaaaaatgttgatagaaacccggactatatc |
31932701 |
T |
|
| Q |
243 |
catcagggccggag----tacttgtccggatgcatagagaaaatagcatctcgaaacccggcc |
301 |
Q |
| |
|
|||| |||||||| | ||||||||||||||||||||||| ||| |||||||| ||||| |
|
|
| T |
31932700 |
catcgaggccggagcatttgattgtccggatgcatagagaaaatggcagctcgaaactcggcc |
31932638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 44 - 294
Target Start/End: Complemental strand, 31952234 - 31951983
Alignment:
| Q |
44 |
aattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaa |
143 |
Q |
| |
|
||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |
|
|
| T |
31952234 |
aattttatataacacattgcatagtgctattggccgccaatctttcatgctaacctgcgtagaacctttaggaataagtgcaatgttagtaatatttaaa |
31952135 |
T |
|
| Q |
144 |
tcagggagaaactgtcccgtgtctagccaaccacaacatt-cataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagc |
242 |
Q |
| |
|
||||| || | ||||| || |||||||||| |||||||| | | || ||||||||| | |||||||||||||| ||||| || ||||||| || ||| | |
|
|
| T |
31952134 |
tcaggtggacattgtcctgtatctagccaactacaacattccttgaatatgtcatcaatacataaattccaaaaatgttgatagaaacccgaacaatatc |
31952035 |
T |
|
| Q |
243 |
catcagggccggagtacttgtccggatgcatagagaaaatagcatctcgaaa |
294 |
Q |
| |
|
|||| ||||||||| | |||||||| |||||||||||||| ||| ||||||| |
|
|
| T |
31952034 |
catcggggccggagcatttgtccggttgcatagagaaaatggcagctcgaaa |
31951983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 45 - 288
Target Start/End: Original strand, 6008592 - 6008836
Alignment:
| Q |
45 |
attttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaat |
144 |
Q |
| |
|
||||| |||| |||||| || ||||| || || |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
6008592 |
attttgtataacacattacaaagtgctatagggcgccaatccttcatgctaacctgcgtagaaccttttgggataagggcaatgttagtaatattcaaat |
6008691 |
T |
|
| Q |
145 |
cagggagaaactgtcccgtgtctagccaaccacaacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagcc |
243 |
Q |
| |
|
|||| |||| |||||||| |||| ||||||||| ||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||| | |||| |
|
|
| T |
6008692 |
tagggggaaattgtcccgtatctaaccaaccacagcattctttaaaaatatcatcactacataaattccaaaagtgctggtaaaaacccggattgaagcc |
6008791 |
T |
|
| Q |
244 |
atcagggccggagtacttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||| ||||| || |||| || |||||||||||||||||| |||| |
|
|
| T |
6008792 |
atctgggcctgaacacttatctggatgcatagagaaaataacatc |
6008836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 288
Target Start/End: Complemental strand, 17784397 - 17784153
Alignment:
| Q |
45 |
attttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaat |
144 |
Q |
| |
|
||||| |||| |||||| || ||||| || || ||||| || |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
17784397 |
attttgtataacacattacaaagtgctatagggcgccagtccttcatgctaacctgcgtagaaccttttgaaataagggcaatgttagtaatattcaaat |
17784298 |
T |
|
| Q |
145 |
cagggagaaactgtcccgtgtctagccaaccacaacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagcc |
243 |
Q |
| |
|
||||| |||| |||||||| |||| ||||||||| || || ||||||| |||||||| |||||| |||||||||| || |||||||||||| | |||| |
|
|
| T |
17784297 |
cagggggaaattgtcccgtatctaaccaaccacatcagtctttaaaaatatcatcactacataaactccaaaagtgctgataaaaacccggattgaagcc |
17784198 |
T |
|
| Q |
244 |
atcagggccggagtacttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||| ||||| || |||| || ||||||||||||||||||||||| |
|
|
| T |
17784197 |
atctgggcctgaacacttatctggatgcatagagaaaatagcatc |
17784153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 288
Target Start/End: Complemental strand, 19085916 - 19085672
Alignment:
| Q |
45 |
attttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaat |
144 |
Q |
| |
|
||||| |||| |||||| || ||||| || || ||||| || |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
19085916 |
attttgtataacacattacaaagtgctatagggcgccagtccttcatgctaacctgcgtagaaccttttgaaataagggcaatgttagtaatattcaaat |
19085817 |
T |
|
| Q |
145 |
cagggagaaactgtcccgtgtctagccaaccacaacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagcc |
243 |
Q |
| |
|
||||| |||| |||||||| |||| ||||||||| || || ||||||| |||||||| |||||| |||||||||| || |||||||||||| | |||| |
|
|
| T |
19085816 |
cagggggaaattgtcccgtatctaaccaaccacatcagtctttaaaaatatcatcactacataaactccaaaagtgctgataaaaacccggattgaagcc |
19085717 |
T |
|
| Q |
244 |
atcagggccggagtacttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||| ||||| || |||| || ||||||||||||||||||||||| |
|
|
| T |
19085716 |
atctgggcctgaacacttatctggatgcatagagaaaatagcatc |
19085672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 288
Target Start/End: Complemental strand, 19093024 - 19092780
Alignment:
| Q |
45 |
attttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaat |
144 |
Q |
| |
|
||||| |||| |||||| || ||||| || || ||||| || |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
19093024 |
attttgtataacacattacaaagtgctatagggcgccagtccttcatgctaacctgcgtagaaccttttgaaataagggcaatgttagtaatattcaaat |
19092925 |
T |
|
| Q |
145 |
cagggagaaactgtcccgtgtctagccaaccacaacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagcc |
243 |
Q |
| |
|
||||| |||| |||||||| |||| ||||||||| || || ||||||| |||||||| |||||| |||||||||| || |||||||||||| | |||| |
|
|
| T |
19092924 |
cagggggaaattgtcccgtatctaaccaaccacatcagtctttaaaaatatcatcactacataaactccaaaagtgctgataaaaacccggattgaagcc |
19092825 |
T |
|
| Q |
244 |
atcagggccggagtacttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||| ||||| || |||| || ||||||||||||||||||||||| |
|
|
| T |
19092824 |
atctgggcctgaacacttatctggatgcatagagaaaatagcatc |
19092780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 49640213 - 49639940
Alignment:
| Q |
16 |
tcaacctgttcactagtactttagaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttgg |
115 |
Q |
| |
|
|||||||||| ||||||| || |||| |||||| || | ||||| || ||||| || || |||||||| ||||| ||||| |||| | |||||||||| |
|
|
| T |
49640213 |
tcaacctgtttgctagtaccttggaaataattttgtacaagacattacaaagtgctatagggcgccaatccttcatactaacatgcgcataaccttttgg |
49640114 |
T |
|
| Q |
116 |
aataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacatt-cataaaaatgtcatcactgcataaattccaa |
214 |
Q |
| |
|
|||||| | ||||||||||||||| |||||||| | || |||||||| |||| |||| |||| |||| | |||||| || || ||||||||||| ||| |
|
|
| T |
49640113 |
aataagagcaatgttagtaatattcaaatcaggagggaattgtcccgtatctaaccaagcacaccatttcttaaaaacatcgtcgctgcataaatttcaa |
49640014 |
T |
|
| Q |
215 |
aagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||| | |||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
49640013 |
aagtgctgataaaaacccggattatagccatcaggactggagcacttgtccggatgcatagagaaaattgcatc |
49639940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 12529288 - 12529373
Alignment:
| Q |
162 |
gtgtctagccaaccacaacattcata-aaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatc |
246 |
Q |
| |
|
|||||||||||| ||||||||| | ||||| |||||||| || || |||||||| ||||| ||||| ||||||||||| ||||| |
|
|
| T |
12529288 |
gtgtctagccaaatacaacattctttgaaaatctcatcactacacaagttccaaaattgttgataaaatcccggactataaccatc |
12529373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0252 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0252
Description:
Target: scaffold0252; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 16 - 350
Target Start/End: Complemental strand, 5514 - 5179
Alignment:
| Q |
16 |
tcaacctgttcactagtactttagaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttgg |
115 |
Q |
| |
|
|||||||||| ||| |||||||| | ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||| || |
|
|
| T |
5514 |
tcaacctgtttcctaacactttagatataattttatataaaacattgcaaagtgctattggccgccaatctttcatgctaacctgcgaataacctttagg |
5415 |
T |
|
| Q |
116 |
aataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacattcataaaa-atgtcatcactgcataaattccaa |
214 |
Q |
| |
|
|||||| | ||||||| |||||||||||||||| | |||||||| || |||| ||||||||||||||| | || |||||||||||||||||||||||| |
|
|
| T |
5414 |
aataagtgcaatgttaataatatttaaatcaggtgggaactgtcctgtatctaaccaaccacaacattccttgaagatgtcatcactgcataaattccaa |
5315 |
T |
|
| Q |
215 |
aagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatctcgaaacccggccttagtaaaaggtg |
314 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| | ||||| ||||||||||||| |||| |
|
|
| T |
5314 |
aattgttggtaaaaacccggactatatccatcagggccggaacatttgtccggatgcatagagaaaatagcaacacgaaattcggccttagtaaatggtg |
5215 |
T |
|
| Q |
315 |
ccgcgagcataacataatcatgagcagagatagacg |
350 |
Q |
| |
|
||| || | | ||| ||||||| |||||||||||| |
|
|
| T |
5214 |
ccgtaagaagaccattatcatgaacagagatagacg |
5179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 109; Significance: 9e-55; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 87 - 354
Target Start/End: Complemental strand, 14503262 - 14502994
Alignment:
| Q |
87 |
ttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacattc-a |
185 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||||| |||| ||||||||| ||||| |
|
|
| T |
14503262 |
ttcatgctaacctgcttagaaccttttgggataagggcaatgttagtaatattcaaatcagggggaaattgtcccgtatctaaccaaccacagcattctt |
14503163 |
T |
|
| Q |
186 |
taaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagc |
285 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||||||||||||| | ||||||| ||||| || |||| || |||||||||||||||||||| |
|
|
| T |
14503162 |
taaaaatatcatcactacataaattccaaaagtgctggtaaaaacccggattgaagccatctgggcctgaacacttatctggatgcatagagaaaatagc |
14503063 |
T |
|
| Q |
286 |
atctcgaaacccggccttagtaaaaggtgccgcgagcataacataatcatgagcagagatagacggatt |
354 |
Q |
| |
|
||| |||| | ||||||| ||||| |||| |||||| ||| |||| | |||| ||||||||||| |
|
|
| T |
14503062 |
atccttaaactctgccttagagaaaggggccgtgagcatttcattgtcattatcagaaatagacggatt |
14502994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 93 - 309
Target Start/End: Original strand, 29338499 - 29338716
Alignment:
| Q |
93 |
ctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacattcat-aaaaa |
191 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| | || |||||||| |||| |||| |||||||||| | ||||| |
|
|
| T |
29338499 |
ctaacctgcgtagaaccttttggaataagagcaatgttagtaatattcaaatcaggagggaattgtcccgtatctaaccaagcacaacattccttaaaaa |
29338598 |
T |
|
| Q |
192 |
tgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagcatctcg |
291 |
Q |
| |
|
|| || |||||||||||||||||||| || |||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||| ||||| || |
|
|
| T |
29338599 |
catcgtcgctgcataaattccaaaagtgctgataaaaacccggactatagccatcaggactggagcacttgtccgaatgcatagagaaaattgcatcacg |
29338698 |
T |
|
| Q |
292 |
aaacccggccttagtaaa |
309 |
Q |
| |
|
|| ||||||| ||||| |
|
|
| T |
29338699 |
gaattcggccttggtaaa |
29338716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 78 - 288
Target Start/End: Original strand, 15993009 - 15993220
Alignment:
| Q |
78 |
cgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccac |
177 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||| ||| |||||||| |||| |||||||| |
|
|
| T |
15993009 |
cgccagtccttcatgctaacctgcgtagaaccttttgggataagggcaatgttagtaatattcaaatctggggaaaattgtcccgtatctaaccaaccac |
15993108 |
T |
|
| Q |
178 |
aacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcataga |
276 |
Q |
| |
|
| ||||| ||||||| |||||||| ||||||||||||||||| ||||||||||| || | ||||||| ||||| || |||| | ||||||||||| |
|
|
| T |
15993109 |
agcattctttaaaaatatcatcactacataaattccaaaagtgctggtaaaaaccaagattgaagccatctgggcctgaacacttacctggatgcataga |
15993208 |
T |
|
| Q |
277 |
gaaaatagcatc |
288 |
Q |
| |
|
||| |||||||| |
|
|
| T |
15993209 |
gaagatagcatc |
15993220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 235
Target Start/End: Complemental strand, 22186452 - 22186256
Alignment:
| Q |
39 |
gaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatat |
138 |
Q |
| |
|
|||| ||||||||| | ||||| || ||||| || || | |||||||||||| || ||||||||| ||||| || || | | ||| |||||||||| |
|
|
| T |
22186452 |
gaaataattttatacaagacattacagagtgctatagggcaccaatctttcatactgacctgcgtaacgcctttcggtattaaagcaatattagtaatat |
22186353 |
T |
|
| Q |
139 |
ttaaatcagggagaaactgtcccgtgtctagccaaccacaacattcat-aaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccgga |
235 |
Q |
| |
|
|||||||||| ||||||||| ||| |||| ||||| ||||||| | |||||| |||||| |||||||||||||||||||||| | ||||||||| |
|
|
| T |
22186352 |
ttaaatcaggaggaaactgtctcgtttcta-ccaactgaaacattccttaaaaatatcatcatagcataaattccaaaagtgttggaagaaacccgga |
22186256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 87 - 354
Target Start/End: Complemental strand, 22289917 - 22289649
Alignment:
| Q |
87 |
ttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacattc-a |
185 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||||| |||| ||||||| | ||||| |
|
|
| T |
22289917 |
ttcatgctaacctgcttagaaccttttgggataagggcaatgttagtaatattcaaatcagggggaaattgtcccgtatctaaccaaccatagcattctt |
22289818 |
T |
|
| Q |
186 |
taaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcatagagaaaatagc |
285 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||||||||||||| | ||||||| ||||| || |||| || |||||||||||||||||||| |
|
|
| T |
22289817 |
taaaaatatcatcactacataaattccaaaagtgctggtaaaaacccggattgaagccatctgggcctgaacacttatctggatgcatagagaaaatagc |
22289718 |
T |
|
| Q |
286 |
atctcgaaacccggccttagtaaaaggtgccgcgagcataacataatcatgagcagagatagacggatt |
354 |
Q |
| |
|
||| |||| | ||||||| ||||| |||| |||||| ||| |||| | |||| ||||||||||| |
|
|
| T |
22289717 |
atccttaaactctgccttagagaaaggggccgtgagcatttcattgtcattatcagaaatagacggatt |
22289649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 45 - 288
Target Start/End: Complemental strand, 28244234 - 28243990
Alignment:
| Q |
45 |
attttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaat |
144 |
Q |
| |
|
||||| |||| |||||| || ||||| || || || || || |||||| |||||||||||||||||||||| ||||||| ||| ||||||||||| |||| |
|
|
| T |
28244234 |
attttgtataacacattacaaagtgctataggtcgtcagtccttcatgttaacctgcgtagaaccttttgggataagggcaatattagtaatattcaaat |
28244135 |
T |
|
| Q |
145 |
cagggagaaactgtcccgtgtctagccaaccacaacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagcc |
243 |
Q |
| |
|
||||| |||| |||| |||||||| ||||||||||||||| | ||||| |||||| | ||||||||||| ||||| ||||||||| ||||| | |||| |
|
|
| T |
28244134 |
cagggggaaattgtctcgtgtctaaccaaccacaacattctttgaaaatatcatcattacataaattccataagtgctggtaaaaatccggattgaagcc |
28244035 |
T |
|
| Q |
244 |
atcagggccggagtacttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
28244034 |
atcagggcctgaacacttgtctggatgcatagagaaaatagcatc |
28243990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 22788805 - 22788893
Alignment:
| Q |
188 |
aaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcataga |
276 |
Q |
| |
|
||||| |||||||| || ||||||||||| |||||||| ||||| ||| |||||||||| || |||| | ||||||||||||||||| |
|
|
| T |
22788805 |
aaaatctcatcactacacaaattccaaaactgttggtagaaaccgggattatagccatcgggaccgggacatttgtccggatgcataga |
22788893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 288
Target Start/End: Complemental strand, 30856945 - 30856701
Alignment:
| Q |
45 |
attttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaat |
144 |
Q |
| |
|
||||| |||| |||||| || ||||| || || ||| | || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
30856945 |
attttgtataacacattacaaagtgctatagggcgctagtccttcatgctaacctgcgtagaaccttttgggataagggcaatgttagtaatattcaaat |
30856846 |
T |
|
| Q |
145 |
cagggagaaactgtcccgtgtctagccaaccacaacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagcc |
243 |
Q |
| |
|
||||| |||| |||| | | |||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||| | | |||| |
|
|
| T |
30856845 |
cagggggaaattgtctcatatctaaccaaccacaacattctttaaaaatatcatcactacataaattccaaaagtgctggtaaaaacccgaattgaagcc |
30856746 |
T |
|
| Q |
244 |
atcagggccggagtacttgtccggatgcatagagaaaatagcatc |
288 |
Q |
| |
|
||| | || || |||| || ||||||||||||||||||||||| |
|
|
| T |
30856745 |
atctgaacctgaacacttatctggatgcatagagaaaatagcatc |
30856701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 55225156 - 55225071
Alignment:
| Q |
78 |
cgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtcccgt |
163 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || ||| |||||||| |
|
|
| T |
55225156 |
cgccagtccttcatgctaacctgcgtagaaccttttgggataagggcaatgttagtaatattcaaatcatgggaaaattgtcccgt |
55225071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 276
Target Start/End: Original strand, 27012405 - 27012520
Alignment:
| Q |
162 |
gtgtctagccaaccacaacattcata-aaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtact |
260 |
Q |
| |
|
|||||||||||| ||||||||| | ||||| |||||||| || || |||||||| ||||| ||||| ||||||||||| ||||| || ||||| | | |
|
|
| T |
27012405 |
gtgtctagccaaatacaacattctttgaaaatctcatcactacacaagttccaaaattgttgataaaatcccggactataaccatccggcccggaacatt |
27012504 |
T |
|
| Q |
261 |
tgtccggatgcataga |
276 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
27012505 |
tatccggatgcataga |
27012520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 273
Target Start/End: Complemental strand, 6614057 - 6613973
Alignment:
| Q |
189 |
aaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtacttgtccggatgcat |
273 |
Q |
| |
|
|||| ||||||||||||| | |||| || || || ||||| |||||||||||||| ||| |||| | | |||||||||||||||| |
|
|
| T |
6614057 |
aaatatcatcactgcatagactccagaaatgctgataaaatcccggactatagccgtcaaggcctgggcacttgtccggatgcat |
6613973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 219
Target Start/End: Complemental strand, 25102203 - 25102027
Alignment:
| Q |
44 |
aattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaa |
143 |
Q |
| |
|
||||||||||| ||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |
|
|
| T |
25102203 |
aattttatataacacattgcataatgctattggctgccaatctttcatgctaacctgcgtagaacctttaggaataagtgcaatgttagtaatatttaaa |
25102104 |
T |
|
| Q |
144 |
tcagggagaaactgtcccgtgtctagccaaccacaacatt-cataaaaatgtcatcactgcataaattccaaaagtg |
219 |
Q |
| |
|
||||| |||| ||||| | |||| |||||||||||||| | | || ||||||||||| ||||||||||||||||| |
|
|
| T |
25102103 |
tcaggtggaaattgtcctctatctaaccaaccacaacattccttgaagatgtcatcactacataaattccaaaagtg |
25102027 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 45011467 - 45011271
Alignment:
| Q |
33 |
actttagaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttag |
132 |
Q |
| |
|
|||||||| | |||||| ||||| ||||||| || || || || ||||||||||||||||||||||||| |||||| |||||||| | ||| || | |
|
|
| T |
45011467 |
actttagatataattttgtatagggcattgcaaagagctatgggacgccaatctttcatgctaacctgcgagttacctttcggaataagagcaatatttg |
45011368 |
T |
|
| Q |
133 |
taatatttaaatcagggagaaactgtcccgtgtctagccaaccacaacatt-cataaaaatgtcatcactgcataaattccaaaagtgttggtaaaa |
228 |
Q |
| |
|
| ||| | || |||||| |||| |||||||| || ||||| ||||||||| | ||||||| ||| ||||||| || |||||||| |||| |||||| |
|
|
| T |
45011367 |
tcatactcaagtcagggggaaattgtcccgtatcaagccacacacaacattccttaaaaatatcaacactgcacaagttccaaaaatgtttgtaaaa |
45011271 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 229
Target Start/End: Complemental strand, 20658774 - 20658621
Alignment:
| Q |
77 |
ccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaacca |
176 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||| | | ||| ||||| || || |||||||| ||||||| || | |||| |||| || |
|
|
| T |
20658774 |
ccgccaatccttcatgctaacctgcgaggaaccttttggaattaacgcaatattagtgatgttcaaatcaggaggaaactgctccatatctaaccaagca |
20658675 |
T |
|
| Q |
177 |
caacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaa |
229 |
Q |
| |
|
|||||||| ||||||| ||||| || |||||||||| || |||||||||||| |
|
|
| T |
20658674 |
caacattctttaaaaatatcatcgctatataaattccagaaatgttggtaaaaa |
20658621 |
T |
|
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Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 273
Target Start/End: Complemental strand, 26905103 - 26904868
Alignment:
| Q |
39 |
gaaacaattttatatagcacattgcacagtgcaattggccgccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatat |
138 |
Q |
| |
|
|||| ||||||||| || ||||| || || ||||| || |||||||| |||||||||||||| ||||||||| |||||||| | |||||||||||| | |
|
|
| T |
26905103 |
gaaataattttataaagaacattacatagagcaatgggacgccaatcgcgcatgctaacctgcgaagaacctttcggaataagagcaatgttagtaatgt |
26905004 |
T |
|
| Q |
139 |
ttaaatcagggagaaactgtcccgtgtctagccaaccacaacattc-ataaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggact |
237 |
Q |
| |
|
| ||||| ||| ||||||| ||||| |||| |||| |||||||||| | ||||| ||||| || || ||||||||||| ||||| || |||| ||| | |
|
|
| T |
26905003 |
tcaaatccgggggaaactgccccgtttctaaccaagcacaacattctttgaaaatatcatcgctacacaaattccaaaaatgttgatagaaactaggatt |
26904904 |
T |
|
| Q |
238 |
atagccatcagggccggagtacttgtccggatgcat |
273 |
Q |
| |
|
|| ||||||||||| || |||||||||||||||| |
|
|
| T |
26904903 |
gtatccatcagggcctgaacacttgtccggatgcat |
26904868 |
T |
|
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Target: scaffold0011 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 189071 - 189175
Alignment:
| Q |
80 |
ccaatctttcatgctaacctgcgtagaaccttttggaataagggaaatgttagtaatatttaaatcagggagaaactgtcccgtgtctagccaaccacaa |
179 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||||| |||||||| | || |||||||| |||| |||| ||||| |
|
|
| T |
189071 |
ccaatccttcatactaacttgcgtagaaccttttggaataagagcaatgttagtaatattcaaatcaggagggaattgtcccgtatctaaccaagcacaa |
189170 |
T |
|
| Q |
180 |
cattc |
184 |
Q |
| |
|
||||| |
|
|
| T |
189171 |
cattc |
189175 |
T |
|
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Target: scaffold0381 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 7379 - 7264
Alignment:
| Q |
162 |
gtgtctagccaaccacaacattcata-aaaatgtcatcactgcataaattccaaaagtgttggtaaaaacccggactatagccatcagggccggagtact |
260 |
Q |
| |
|
|||||||||||| ||||||||| | ||||| |||||||| || || |||||||| ||||| ||||| ||||||||||| ||||| || ||||| | | |
|
|
| T |
7379 |
gtgtctagccaaatacaacattctttgaaaatctcatcactacacaagttccaaaattgttgataaaatcccggactataaccatccggcccggaacatt |
7280 |
T |
|
| Q |
261 |
tgtccggatgcataga |
276 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
7279 |
tatccggatgcataga |
7264 |
T |
|
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Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 41338298 - 41338232
Alignment:
| Q |
166 |
ctagccaaccacaacattcat-aaaaatgtcatcactgcataaattccaaaagtgttggtaaaaacc |
231 |
Q |
| |
|
|||||||| |||||||||| | |||||| |||||||| || ||||||||||| ||||||| |||||| |
|
|
| T |
41338298 |
ctagccaagcacaacattctttaaaaatatcatcactacacaaattccaaaaatgttggtgaaaacc |
41338232 |
T |
|
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