View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18007_low_79 (Length: 243)
Name: NF18007_low_79
Description: NF18007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18007_low_79 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 43972559 - 43972367
Alignment:
| Q |
32 |
aaagagaacccttatatatagcaattgttaatgaaataaatttaaaattttctattttttgttatcttaattagtgctattagggcacttgttagcttga |
131 |
Q |
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| T |
43972559 |
aaagagaacccttatatatagcaattgttaatgaaataaatttaaaattttctattttttgttatcttaattagtgctattagggcacttgttagcttga |
43972460 |
T |
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| Q |
132 |
cctataaaaagaaaatacaaaacatgagacctacttgcccttagtagagaggaagagatgtgatgagcttacacaatagcagacatatattcc |
224 |
Q |
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| T |
43972459 |
cctataaaaagaaaatacaaaacatgagaactacttgcccttagtagagaggaagagatgtgatgagcttacacaatagcagacatatattcc |
43972367 |
T |
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