View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18008_high_5 (Length: 204)

Name: NF18008_high_5
Description: NF18008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18008_high_5
NF18008_high_5
[»] chr2 (40 HSPs)
chr2 (1-96)||(2294737-2294832)
chr2 (93-204)||(40613895-40614006)
chr2 (101-204)||(38273135-38273238)
chr2 (101-204)||(36168840-36168943)
chr2 (102-204)||(17473025-17473127)
chr2 (102-202)||(7465730-7465830)
chr2 (102-202)||(28863460-28863560)
chr2 (102-204)||(9058485-9058587)
chr2 (102-201)||(33436096-33436195)
chr2 (102-201)||(33436216-33436315)
chr2 (101-204)||(42257197-42257300)
chr2 (102-204)||(10249375-10249477)
chr2 (102-204)||(13438348-13438450)
chr2 (102-204)||(5574481-5574583)
chr2 (102-204)||(19930813-19930915)
chr2 (102-204)||(30915468-30915570)
chr2 (102-204)||(32505641-32505743)
chr2 (102-204)||(40701483-40701585)
chr2 (1-62)||(2304466-2304527)
chr2 (102-201)||(20700820-20700919)
chr2 (102-204)||(28381648-28381750)
chr2 (102-201)||(41575142-41575242)
chr2 (102-201)||(27864709-27864808)
chr2 (101-202)||(2533128-2533228)
chr2 (101-201)||(45097731-45097831)
chr2 (95-201)||(43490119-43490225)
chr2 (1-62)||(2322156-2322217)
chr2 (117-201)||(2997483-2997567)
chr2 (101-201)||(26891500-26891600)
chr2 (102-204)||(38882804-38882908)
chr2 (102-204)||(4060690-4060792)
chr2 (96-201)||(17820000-17820105)
chr2 (117-201)||(13365373-13365457)
chr2 (101-201)||(38732358-38732458)
chr2 (103-201)||(3439985-3440083)
chr2 (101-170)||(15428767-15428836)
chr2 (102-165)||(17823789-17823852)
chr2 (141-197)||(3737987-3738043)
chr2 (124-179)||(42849794-42849848)
chr2 (124-168)||(16096870-16096913)
[»] chr1 (35 HSPs)
chr1 (101-204)||(32813251-32813354)
chr1 (95-204)||(26440732-26440841)
chr1 (102-204)||(2581920-2582022)
chr1 (102-204)||(9474869-9474971)
chr1 (102-204)||(27564728-27564830)
chr1 (102-204)||(3000324-3000426)
chr1 (102-204)||(8346381-8346483)
chr1 (102-204)||(38632314-38632416)
chr1 (102-204)||(44548369-44548471)
chr1 (102-197)||(51898683-51898778)
chr1 (102-204)||(38595159-38595261)
chr1 (102-204)||(47452313-47452415)
chr1 (102-204)||(48716275-48716377)
chr1 (102-204)||(23597084-23597186)
chr1 (102-204)||(37649203-37649305)
chr1 (102-204)||(41758810-41758912)
chr1 (102-204)||(50630463-50630565)
chr1 (96-201)||(50590996-50591101)
chr1 (101-204)||(37926431-37926534)
chr1 (102-204)||(43137-43239)
chr1 (96-201)||(41608489-41608594)
chr1 (101-204)||(49811520-49811623)
chr1 (101-204)||(45044553-45044656)
chr1 (127-204)||(13414791-13414868)
chr1 (101-201)||(5958996-5959096)
chr1 (95-197)||(6260868-6260970)
chr1 (102-204)||(26274437-26274539)
chr1 (102-197)||(11152378-11152472)
chr1 (95-201)||(47748441-47748546)
chr1 (101-201)||(44453983-44454083)
chr1 (124-204)||(48489328-48489407)
chr1 (124-179)||(7447936-7447990)
chr1 (101-179)||(7740737-7740815)
chr1 (124-168)||(4401450-4401493)
chr1 (124-168)||(50448195-50448238)
[»] chr3 (39 HSPs)
chr3 (95-204)||(26141525-26141634)
chr3 (101-204)||(51419353-51419456)
chr3 (102-204)||(53982016-53982118)
chr3 (96-204)||(20764908-20765016)
chr3 (101-204)||(11347915-11348018)
chr3 (101-204)||(47531869-47531972)
chr3 (101-204)||(52629304-52629407)
chr3 (102-204)||(33644205-33644307)
chr3 (102-201)||(24699950-24700049)
chr3 (101-204)||(41189757-41189860)
chr3 (102-204)||(17470410-17470512)
chr3 (102-204)||(49607419-49607521)
chr3 (102-204)||(31456694-31456796)
chr3 (102-204)||(54868888-54868990)
chr3 (102-201)||(8076398-8076497)
chr3 (102-200)||(27714888-27714986)
chr3 (102-204)||(11095348-11095448)
chr3 (102-201)||(35536631-35536730)
chr3 (102-204)||(48587084-48587186)
chr3 (101-201)||(26754699-26754799)
chr3 (101-201)||(33118847-33118947)
chr3 (102-201)||(8956767-8956866)
chr3 (102-201)||(14623835-14623934)
chr3 (101-204)||(11907375-11907478)
chr3 (102-201)||(13898051-13898150)
chr3 (96-201)||(30801729-30801834)
chr3 (102-204)||(9563004-9563106)
chr3 (119-201)||(36331325-36331407)
chr3 (96-201)||(45058549-45058653)
chr3 (102-201)||(41080714-41080811)
chr3 (102-204)||(36707421-36707519)
chr3 (97-201)||(25395329-25395433)
chr3 (101-201)||(48375702-48375802)
chr3 (125-186)||(40480853-40480913)
chr3 (101-156)||(36331419-36331474)
chr3 (124-179)||(53581793-53581847)
chr3 (102-201)||(35965778-35965869)
chr3 (101-201)||(42823115-42823215)
chr3 (124-180)||(52629938-52629993)
[»] chr5 (31 HSPs)
chr5 (95-204)||(28177773-28177882)
chr5 (96-204)||(26720515-26720623)
chr5 (96-204)||(26990264-26990372)
chr5 (102-204)||(2740279-2740381)
chr5 (102-204)||(40145412-40145514)
chr5 (102-202)||(18520879-18520979)
chr5 (102-204)||(33149631-33149733)
chr5 (102-204)||(36732935-36733037)
chr5 (101-204)||(6679702-6679805)
chr5 (101-204)||(15409603-15409706)
chr5 (101-201)||(2252164-2252264)
chr5 (104-200)||(13811659-13811755)
chr5 (102-204)||(35785204-35785306)
chr5 (102-204)||(42414295-42414397)
chr5 (101-201)||(3921261-3921361)
chr5 (102-202)||(14831819-14831919)
chr5 (102-197)||(20073516-20073611)
chr5 (101-201)||(35943888-35943988)
chr5 (101-197)||(31008992-31009088)
chr5 (102-202)||(33825319-33825419)
chr5 (102-202)||(36875607-36875698)
chr5 (102-201)||(6259997-6260096)
chr5 (100-156)||(10356637-10356694)
chr5 (101-198)||(38296207-38296304)
chr5 (141-201)||(21370048-21370108)
chr5 (101-201)||(39688893-39688993)
chr5 (102-201)||(9603818-9603917)
chr5 (102-201)||(16327906-16328005)
chr5 (145-204)||(31132392-31132451)
chr5 (105-188)||(41470425-41470508)
chr5 (128-202)||(39557512-39557586)
[»] chr6 (22 HSPs)
chr6 (101-204)||(31976252-31976355)
chr6 (104-204)||(32869685-32869785)
chr6 (102-204)||(22880651-22880753)
chr6 (102-204)||(17598559-17598661)
chr6 (101-204)||(31110754-31110855)
chr6 (102-204)||(29857832-29857934)
chr6 (102-204)||(11427621-11427725)
chr6 (96-201)||(15508020-15508125)
chr6 (101-201)||(15990038-15990138)
chr6 (101-201)||(30341356-30341456)
chr6 (102-204)||(6209458-6209560)
chr6 (96-201)||(4231547-4231652)
chr6 (109-204)||(31109393-31109488)
chr6 (100-201)||(9379708-9379809)
chr6 (102-202)||(28536483-28536581)
chr6 (128-204)||(23128120-23128196)
chr6 (93-201)||(31953026-31953134)
chr6 (102-202)||(15832582-15832682)
chr6 (104-204)||(946383-946483)
chr6 (102-201)||(12732487-12732586)
chr6 (124-177)||(26669944-26669996)
chr6 (124-168)||(7367671-7367714)
[»] chr4 (38 HSPs)
chr4 (102-201)||(50052424-50052523)
chr4 (102-204)||(11511455-11511557)
chr4 (102-204)||(48183042-48183144)
chr4 (96-204)||(31910191-31910299)
chr4 (102-204)||(480440-480542)
chr4 (102-204)||(6034049-6034151)
chr4 (102-204)||(29234238-29234340)
chr4 (102-204)||(41236352-41236454)
chr4 (102-204)||(42044360-42044462)
chr4 (101-201)||(55475195-55475295)
chr4 (102-204)||(24995100-24995202)
chr4 (95-204)||(40574777-40574886)
chr4 (102-197)||(50526171-50526266)
chr4 (102-204)||(54473526-54473628)
chr4 (102-201)||(3481659-3481758)
chr4 (102-201)||(29239891-29239990)
chr4 (101-201)||(19670712-19670812)
chr4 (102-202)||(23608240-23608340)
chr4 (101-201)||(32766962-32767062)
chr4 (135-204)||(41823920-41823989)
chr4 (117-201)||(17983739-17983823)
chr4 (101-201)||(47986212-47986312)
chr4 (102-201)||(29977890-29977989)
chr4 (101-204)||(53352559-53352661)
chr4 (101-201)||(8343159-8343259)
chr4 (101-201)||(29547955-29548055)
chr4 (101-201)||(48647722-48647822)
chr4 (101-201)||(50813888-50813988)
chr4 (102-167)||(47104549-47104614)
chr4 (101-201)||(55079709-55079810)
chr4 (105-201)||(29589736-29589831)
chr4 (101-167)||(18769113-18769179)
chr4 (105-198)||(28480267-28480360)
chr4 (105-198)||(28481142-28481235)
chr4 (105-198)||(28482017-28482110)
chr4 (123-186)||(33703245-33703307)
chr4 (95-201)||(18924491-18924597)
chr4 (96-201)||(29535376-29535480)
[»] chr8 (33 HSPs)
chr8 (102-204)||(4854856-4854958)
chr8 (95-204)||(43414574-43414683)
chr8 (102-204)||(12831052-12831154)
chr8 (96-202)||(15048177-15048282)
chr8 (102-204)||(15197338-15197440)
chr8 (104-204)||(14547929-14548029)
chr8 (101-204)||(10621080-10621183)
chr8 (102-204)||(504114-504216)
chr8 (102-204)||(34012289-34012391)
chr8 (102-201)||(5957835-5957934)
chr8 (102-197)||(37038484-37038579)
chr8 (102-204)||(23122590-23122692)
chr8 (102-204)||(40423936-40424038)
chr8 (102-204)||(44507080-44507182)
chr8 (101-201)||(10284627-10284727)
chr8 (102-204)||(1179933-1180035)
chr8 (101-201)||(16383381-16383481)
chr8 (117-201)||(8841428-8841512)
chr8 (102-201)||(20074938-20075029)
chr8 (101-201)||(15258925-15259025)
chr8 (101-201)||(16056397-16056497)
chr8 (101-201)||(24307789-24307889)
chr8 (101-201)||(34307220-34307320)
chr8 (101-201)||(30479470-30479570)
chr8 (101-201)||(32032729-32032828)
chr8 (141-204)||(9122229-9122292)
chr8 (101-201)||(17443829-17443929)
chr8 (124-186)||(29705466-29705527)
chr8 (101-170)||(24307633-24307702)
chr8 (141-201)||(38229472-38229532)
chr8 (102-201)||(42221520-42221619)
chr8 (124-168)||(2547118-2547161)
chr8 (124-168)||(42197370-42197413)
[»] chr7 (39 HSPs)
chr7 (93-204)||(19329838-19329949)
chr7 (101-204)||(35522880-35522983)
chr7 (102-204)||(3434567-3434669)
chr7 (102-204)||(7389394-7389496)
chr7 (101-191)||(46374808-46374898)
chr7 (102-204)||(8080376-8080478)
chr7 (102-204)||(36361906-36362008)
chr7 (102-204)||(38267045-38267147)
chr7 (102-204)||(38837222-38837324)
chr7 (102-202)||(4999509-4999609)
chr7 (102-204)||(3784000-3784102)
chr7 (102-204)||(19436180-19436282)
chr7 (102-204)||(32951486-32951588)
chr7 (102-204)||(35137538-35137640)
chr7 (102-204)||(36362031-36362133)
chr7 (95-200)||(21234399-21234504)
chr7 (95-204)||(31735882-31735984)
chr7 (101-204)||(26296648-26296751)
chr7 (102-201)||(35468851-35468950)
chr7 (101-204)||(46033794-46033897)
chr7 (102-204)||(3694372-3694474)
chr7 (102-204)||(40957712-40957814)
chr7 (101-201)||(22343365-22343465)
chr7 (101-201)||(36208177-36208277)
chr7 (101-201)||(41915745-41915845)
chr7 (96-201)||(32564422-32564527)
chr7 (101-201)||(18207184-18207283)
chr7 (101-201)||(38044201-38044301)
chr7 (95-201)||(8238210-8238317)
chr7 (96-201)||(39255920-39256024)
chr7 (96-201)||(41423681-41423786)
chr7 (101-201)||(40846109-40846209)
chr7 (102-201)||(10343559-10343658)
chr7 (131-199)||(27744307-27744375)
chr7 (102-201)||(2318239-2318338)
chr7 (124-179)||(32029752-32029806)
chr7 (127-201)||(16374820-16374894)
chr7 (101-197)||(7727910-7728006)
chr7 (102-146)||(11044193-11044237)
[»] scaffold0237 (1 HSPs)
scaffold0237 (102-204)||(4034-4136)
[»] scaffold1268 (1 HSPs)
scaffold1268 (102-201)||(925-1024)
[»] scaffold1267 (1 HSPs)
scaffold1267 (102-201)||(925-1024)
[»] scaffold0321 (1 HSPs)
scaffold0321 (101-204)||(10102-10205)
[»] scaffold0110 (1 HSPs)
scaffold0110 (96-201)||(8859-8964)
[»] scaffold0018 (1 HSPs)
scaffold0018 (124-201)||(152525-152602)
[»] scaffold0316 (1 HSPs)
scaffold0316 (145-201)||(17102-17158)
[»] scaffold0119 (1 HSPs)
scaffold0119 (124-177)||(798-850)


Alignment Details
Target: chr2 (Bit Score: 92; Significance: 7e-45; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2294737 - 2294832
Alignment:
Q  1 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaagagatctactaaaaagtaccataactatcaacacat 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2294737 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataataagagatctactaaaaagtaccataactatcaacacat 2294832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 40614006 - 40613895
Alignment:
Q  93 acatgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacac 192  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  40614006 acatgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacac 40613907  T
Q  193 tttctcttttct 204  Q
    ||||||||||||    
T  40613906 tttctcttttct 40613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 38273238 - 38273135
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||| |||||||||||||||    
T  38273238 tatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctctt 38273139  T
Q  201 ttct 204  Q
    ||||    
T  38273138 ttct 38273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 36168840 - 36168943
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||    
T  36168840 tatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctctt 36168939  T
Q  201 ttct 204  Q
    ||||    
T  36168940 ttct 36168943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 17473025 - 17473127
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||    
T  17473025 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 17473124  T
Q  202 tct 204  Q
    |||    
T  17473125 tct 17473127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 7465830 - 7465730
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||  ||||||||||||||||||||    
T  7465830 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 7465731  T
Q  202 t 202  Q
    |    
T  7465730 t 7465730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 28863460 - 28863560
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T
Q  202 t 202  Q
    |    
T  28863560 t 28863560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 9058485 - 9058587
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | || |||||||| |||||||||||||||||||||    
T  9058485 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 9058584  T
Q  202 tct 204  Q
    |||    
T  9058585 tct 9058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 33436195 - 33436096
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||||||||||||    
T  33436195 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 33436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 33436216 - 33436315
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||||| ||| ||||||  ||||||||||||||||||||||    
T  33436216 atgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttctcttt 33436315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 42257197 - 42257300
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||||| |||| |||||||||| | ||| ||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  42257197 tatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctctt 42257296  T
Q  201 ttct 204  Q
    ||||    
T  42257297 ttct 42257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 10249477 - 10249375
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  10249477 atgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 10249378  T
Q  202 tct 204  Q
    |||    
T  10249377 tct 10249375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 13438348 - 13438450
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| || ||||||| ||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  13438348 atgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 13438447  T
Q  202 tct 204  Q
    |||    
T  13438448 tct 13438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 5574583 - 5574481
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||||||| |||||| |||||||| | |||||||| || |||||||||||||||||||||    
T  5574583 atgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 5574484  T
Q  202 tct 204  Q
    |||    
T  5574483 tct 5574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 19930915 - 19930813
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| ||| |||||||||||| |||||||| | || |||||||| |||||| ||||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T
Q  202 tct 204  Q
    |||    
T  19930815 tct 19930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 30915468 - 30915570
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| || |||||| |||||| |||||||| | ||||||||||| | |||||||||||||||||||    
T  30915468 atgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 30915567  T
Q  202 tct 204  Q
    |||    
T  30915568 tct 30915570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 32505743 - 32505641
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||| |||    
T  32505743 atgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctattt 32505644  T
Q  202 tct 204  Q
    |||    
T  32505643 tct 32505641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 40701483 - 40701585
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  |||||||||| |||||| ||||||||||||||    
T  40701483 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttt 40701582  T
Q  202 tct 204  Q
    |||    
T  40701583 tct 40701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2304466 - 2304527
Alignment:
Q  1 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2304466 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 2304527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 20700820 - 20700919
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||  |||||||||||||||| || || |||||||||| |||||||| | ||||||||||| ||| |||||||||||||||||    
T  20700820 atgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttt 20700919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 28381750 - 28381648
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||  |||||||||||||||| |||||||| | ||| ||||| | |||||||||||||||||||||    
T  28381750 atgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttctcttt 28381651  T
Q  202 tct 204  Q
    |||    
T  28381650 tct 28381648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 41575142 - 41575242
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga-ccctgcacaagcacactttctctt 200  Q
    ||||||||||||||||||||||||| |||||||||||| |||  ||||||||||| ||||| |||| || ||||| |||| |||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctt 41575241  T
Q  201 t 201  Q
    |    
T  41575242 t 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 27864709 - 27864808
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||  |||||||||||||||| ||| |||||||||||| ||||||||   ||||||||||| ||| |||||||||||||||||    
T  27864709 atgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttctcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 2533128 - 2533228
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||  |||||||||| ||||| ||||| |||||||||| |||||||| ||||| | ||||| ||||||||||||||| ||||    
T  2533128 tatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacactttttctt 2533226  T
Q  201 tt 202  Q
    ||    
T  2533227 tt 2533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 45097831 - 45097731
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||| |||||||||| || || ||||||| |||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  45097831 tatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 45097732  T
Q  201 t 201  Q
    |    
T  45097731 t 45097731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 43490119 - 43490225
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| ||||||||||| ||| |||||| || |||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 43490218  T
Q  195 tctcttt 201  Q
    | |||||    
T  43490219 tatcttt 43490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2322156 - 2322217
Alignment:
Q  1 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 62  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  2322156 atgcatagaatagagttatggccagaatgaaatggtacttcatgattttcttaataacaaga 2322217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 2997567 - 2997483
Alignment:
Q  117 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 2997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 26891600 - 26891500
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||| || |||||| ||||||||||||| |  |||||||||||||||| ||||| |||| ||||||||||  | ||||||||| ||||||||    
T  26891600 tatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttctctt 26891501  T
Q  201 t 201  Q
    |    
T  26891500 t 26891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 38882908 - 38882804
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga---ccctgcacaagcacactttctc 198  Q
    |||||||||||||| |||||| |||||||| ||||||| ||| |||||||||||| |||||||| | ||||||||   ||| |||||||| |||||||||    
T  38882908 atgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgcactttctc 38882810  T
Q  199 ttttct 204  Q
    ||||||    
T  38882809 ttttct 38882804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 4060690 - 4060792
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| || ||||||||| ||| ||| |||||||||||| |||||||| |  ||||||| || ||| ||||||||||||| |||    
T  4060690 atgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttcttttt 4060789  T
Q  202 tct 204  Q
    |||    
T  4060790 tct 4060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 17820105 - 17820000
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||||||| |  ||| ||||||||||||| || |||||||||||||||| ||||| ||||  ||||||||||  ||||| |||| |||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacatttt 17820006  T
Q  196 ctcttt 201  Q
    ||||||    
T  17820005 ctcttt 17820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 13365373 - 13365457
Alignment:
Q  117 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||| ||| |||  ||||||| ||||||| |||||||||||||    
T  13365373 ccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctcttt 13365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 38732358 - 38732458
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||  || ||||||| || || |||||||||||||||| ||||| |||| ||  ||||||| ||||||| ||||||||||||    
T  38732358 tatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctt 38732457  T
Q  201 t 201  Q
    |    
T  38732458 t 38732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 3439985 - 3440083
Alignment:
Q  103 tgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| |||||| |||||| ||||||||||| | |  |||||||||||||||| | ||| |||   |||||||||| ||||||||||| |||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctcttt 3440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 15428836 - 15428767
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggcca 170  Q
    ||||||||||| |||||||||  |||| |||||||| ||||||| ||||||||||| ||||| |||||||    
T  15428836 tatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggcca 15428767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 17823789 - 17823852
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgt 165  Q
    |||||||||| |||||||||| ||||||||||  | | ||||||||||||||||| ||||||||    
T  17823789 atgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgt 17823852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 3737987 - 3738043
Alignment:
Q  141 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    |||||||||||||||| ||||| |||| || |||||||| ||||||||||| |||||    
T  3737987 acacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

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Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 42849794 - 42849848
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 179  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  42849794 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 42849848  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 16096913 - 16096870
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 168  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  16096913 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 16096870  T

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Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 32813251 - 32813354
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||    
T  32813251 tatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctctt 32813350  T
Q  201 ttct 204  Q
    ||||    
T  32813351 ttct 32813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 26440732 - 26440841
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| || |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| ||||||||||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactt 26440831  T
Q  195 tctcttttct 204  Q
    ||||||||||    
T  26440832 tctcttttct 26440841  T

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Target: chr1; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 2581920 - 2582022
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||| |||    
T  2581920 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttcttttt 2582019  T
Q  202 tct 204  Q
    |||    
T  2582020 tct 2582022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 9474971 - 9474869
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||| ||||||||||||||    
T  9474971 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttctcttt 9474872  T
Q  202 tct 204  Q
    |||    
T  9474871 tct 9474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 27564830 - 27564728
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||   ||||||||||| |||||||||||||||||||||    
T  27564830 atgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttt 27564731  T
Q  202 tct 204  Q
    |||    
T  27564730 tct 27564728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 3000324 - 3000426
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| ||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | |||||||||||||||||||    
T  3000324 atgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 3000423  T
Q  202 tct 204  Q
    |||    
T  3000424 tct 3000426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 8346483 - 8346381
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||| || | |||| |||||||||||| ||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  8346483 atgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttt 8346384  T
Q  202 tct 204  Q
    |||    
T  8346383 tct 8346381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 38632416 - 38632314
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||||||| |||||||||||| |||||||| | ||||||||||| ||||||||||||||| |||||    
T  38632416 atgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttttcttt 38632317  T
Q  202 tct 204  Q
    |||    
T  38632316 tct 38632314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 44548471 - 44548369
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||| |||| |||||||||||| ||| | |||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T
Q  202 tct 204  Q
    |||    
T  44548371 tct 44548369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 51898778 - 51898683
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||    
T  51898778 atgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 38595159 - 38595261
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| ||| | |||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | |||||||||||||||||||    
T  38595159 atgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 38595258  T
Q  202 tct 204  Q
    |||    
T  38595259 tct 38595261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 47452415 - 47452313
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| | |||||| | |||||||| || |||||||||||||||||||||    
T  47452415 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttctcttt 47452316  T
Q  202 tct 204  Q
    |||    
T  47452315 tct 47452313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 48716377 - 48716275
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| |||||||| | ||||||||||| ||||||||||||||| |||||    
T  48716377 atgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttatcttt 48716278  T
Q  202 tct 204  Q
    |||    
T  48716277 tct 48716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 23597186 - 23597084
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||| |||| ||||||||||| |||| | ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||| |||||    
T  23597186 atgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacactttatcttt 23597087  T
Q  202 tct 204  Q
    |||    
T  23597086 tct 23597084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 37649203 - 37649305
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||| |||||||||| |||||| |  | |||||||||||||||| ||||    
T  37649203 atgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttcccttt 37649302  T
Q  202 tct 204  Q
    |||    
T  37649303 tct 37649305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 41758810 - 41758912
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| | ||| ||||||||||||||||| ||| |||||||||||| |||||||| | ||| ||||||| |||||| ||||||||||||||    
T  41758810 atgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttt 41758909  T
Q  202 tct 204  Q
    |||    
T  41758910 tct 41758912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 50630463 - 50630565
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||| | |||||| |||||||||| |||||   |||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  50630463 atgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 50630562  T
Q  202 tct 204  Q
    |||    
T  50630563 tct 50630565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 50591101 - 50590996
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  196 ctcttt 201  Q
    ||||||    
T  50591001 ctcttt 50590996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 37926534 - 37926431
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||| ||| |||| |||||||||| | ||||||||||||| |||||| |||||||||||||| |||| || | ||||| ||||||||||||    
T  37926534 tatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctctt 37926435  T
Q  201 ttct 204  Q
    ||||    
T  37926434 ttct 37926431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 43137 - 43239
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||  |||||  | ||||||| ||||| |||||||||||||||| |||||||| | ||||||||| | |||||||||||||||||||||    
T  43137 atgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttt 43236  T
Q  202 tct 204  Q
    |||    
T  43237 tct 43239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 41608594 - 41608489
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||| |||||||||| ||||||||||||| || |||| ||||||||||| ||||| |||||||  ||||||| | ||||| |||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  196 ctcttt 201  Q
    ||||||    
T  41608494 ctcttt 41608489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 49811623 - 49811520
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||| |||||||||||||| || ||||||||| ||| ||| |||||||||||| |||||||| ||||  | ||| | ||||||||||||||||||||    
T  49811623 tatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttctctt 49811524  T
Q  201 ttct 204  Q
    ||||    
T  49811523 ttct 49811520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 45044656 - 45044553
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |  ||||||| |||||||||||| ||| ||||||| |||||||| ||||| || ||||| ||||||| |||||| |||| ||||||||    
T  45044656 tatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctctt 45044557  T
Q  201 ttct 204  Q
    ||||    
T  45044556 ttct 45044553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 13414791 - 13414868
Alignment:
Q  127 caatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 204  Q
    ||||||||||||| |||||||||||||||| | |||||| | |||||||||||  |||||||||| ||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttct 13414868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 5959096 - 5958996
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||  ||||||||||||  || |||||||||||||||| ||||| |||| ||  ||||||| ||||||| ||||||||||||    
T  5959096 tatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctt 5958997  T
Q  201 t 201  Q
    |    
T  5958996 t 5958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 6260868 - 6260970
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| ||||||| ||||| |||||||| ||| ||||||||| | |||||||||| |||||| | ||| |||| ||||||||||| ||| ||||||| ||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattt 6260967  T
Q  195 tct 197  Q
    |||    
T  6260968 tct 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 26274437 - 26274539
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||  |||||||||| | ||| ||| ||||| |||||| |||||| | | |||||||| |||||||||| ||||||| |||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttcttt 26274536  T
Q  202 tct 204  Q
    |||    
T  26274537 tct 26274539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 11152472 - 11152378
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    |||| ||||||||| |||||| |||||||||||||||  ||| |||||||||||| |||||||| | || || ||||| |||||||||| ||||||    
T  11152472 atgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 47748441 - 47748546
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| ||||||||||| | | |||||| ||||||||||||| || ||||||| | |||||| ||||| |||||||  |||| || ||||||| | ||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactt 47748539  T
Q  195 tctcttt 201  Q
    |||||||    
T  47748540 tctcttt 47748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 44453983 - 44454083
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| | |||  |||||||||| |  || | |||||||||||||| ||||| ||||  ||||||| ||  |||||||||||||| ||||    
T  44453983 tatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttctt 44454082  T
Q  201 t 201  Q
    |    
T  44454083 t 44454083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 48489328 - 48489407
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 204  Q
    ||||||||||||||  | || |||||||||||| ||||| |||| |||||||| || ||||||||||| ||||| ||||||    
T  48489328 tggcaatacaccctgga-catccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttctattttct 48489407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 7447990 - 7447936
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 179  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  7447990 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 7447936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 7740737 - 7740815
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 179  Q
    |||||||||| |||| |||||  || ||||||| || || ||||| ||| |||||||||||||||||| | ||||||||    
T  7740737 tatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccc 7740815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 4401493 - 4401450
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 168  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  4401493 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 4401450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 50448195 - 50448238
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 168  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  50448195 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 50448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 6e-39; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 26141634 - 26141525
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||  |||||||||||||    
T  26141634 atgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactt 26141535  T
Q  195 tctcttttct 204  Q
    ||||||||||    
T  26141534 tctcttttct 26141525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 51419456 - 51419353
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||    
T  51419456 tatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctctt 51419357  T
Q  201 ttct 204  Q
    ||||    
T  51419356 ttct 51419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 53982016 - 53982118
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  53982016 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 53982115  T
Q  202 tct 204  Q
    |||    
T  53982116 tct 53982118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 20765016 - 20764908
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  196 ctcttttct 204  Q
    |||||||||    
T  20764916 ctcttttct 20764908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 11348018 - 11347915
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||| || ||||||| ||||| ||| |||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  11348018 tatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttctctt 11347919  T
Q  201 ttct 204  Q
    ||||    
T  11347918 ttct 11347915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 47531869 - 47531972
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |||||||||||||  || |||| ||||||||||||||||||||    
T  47531869 tatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctctt 47531968  T
Q  201 ttct 204  Q
    ||||    
T  47531969 ttct 47531972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 52629304 - 52629407
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | ||||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  201 ttct 204  Q
    ||||    
T  52629404 ttct 52629407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 33644205 - 33644307
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||| | |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  33644205 atgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 33644304  T
Q  202 tct 204  Q
    |||    
T  33644305 tct 33644307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 24700049 - 24699950
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||| || ||||||||||||||||||||| |||| ||||||||||||||    
T  24700049 atgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttctcttt 24699950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 41189860 - 41189757
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||| |||||||||| | ||| ||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  41189860 tatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctctt 41189761  T
Q  201 ttct 204  Q
    ||||    
T  41189760 ttct 41189757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 17470410 - 17470512
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| | |||| |||||||||||| |||||||||||||||||||| |||||||| | |||||||||||  ||||||||||||||||||||    
T  17470410 atgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 17470509  T
Q  202 tct 204  Q
    |||    
T  17470510 tct 17470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 49607419 - 49607521
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| ||  ||||||||||||||||||||    
T  49607419 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttt 49607518  T
Q  202 tct 204  Q
    |||    
T  49607519 tct 49607521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 31456694 - 31456796
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| || |||  ||||||||||||||| |||||||||||||||| |||||||| | || |||||||| |||||||||||||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 31456793  T
Q  202 tct 204  Q
    |||    
T  31456794 tct 31456796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 54868990 - 54868888
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  |||||||||| |||||| ||||||||||||||    
T  54868990 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttt 54868891  T
Q  202 tct 204  Q
    |||    
T  54868890 tct 54868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 8076398 - 8076497
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| ||| |||||| ||||| |||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||||||||||||    
T  8076398 atgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 8076497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 27714986 - 27714888
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||| | |||| ||| |||||||||||| |||||||||||||||| |||||||| | || |||||||| ||||||||||||||||||||    
T  27714986 atgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 11095448 - 11095348
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||  |||| ||| || ||||||||||||||    
T  11095448 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttctcttt 11095351  T
Q  202 tct 204  Q
    |||    
T  11095350 tct 11095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 35536631 - 35536730
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||  |||||||||||| ||| ||||||||| |||||| |||||||||| || ||||||| | ||||||||||||| ||||||    
T  35536631 atgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcctcttt 35536730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 48587186 - 48587084
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||| | |||||| |||||||||||||||| ||||| ||| |||||| |||||||| | |||||||| || ||||||| |||||||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T
Q  202 tct 204  Q
    |||    
T  48587086 tct 48587084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 26754699 - 26754799
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||| |||||||| |||||| |||||||||||||||  ||| |||||||||||| ||||| |||| ||| ||||||| ||||||||||| ||||||||    
T  26754699 tatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctt 26754798  T
Q  201 t 201  Q
    |    
T  26754799 t 26754799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 33118947 - 33118847
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | |||||||| ||  || || |||||||||||||    
T  33118947 tatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctctt 33118848  T
Q  201 t 201  Q
    |    
T  33118847 t 33118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 8956767 - 8956866
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||  |||||||||| ||||| ||||||||| |||||| |||||||||  || ||||||| | ||||||||||||| ||||||    
T  8956767 atgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcctcttt 8956866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 14623934 - 14623835
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||| |||||| ||||| |||  || |||||||   ||||||||||||||||||||    
T  14623934 atgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 11907375 - 11907478
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| || |||||||| | | ||||| ||||||||||| ||||| |||| ||  ||||||| ||||||||||| ||||||||    
T  11907375 tatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttctctt 11907474  T
Q  201 ttct 204  Q
    ||||    
T  11907475 ttct 11907478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 13898150 - 13898051
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||| |||||||||| ||||||||||||| || ||||||||| |||||| |||||||||  || |||||||   ||||||||||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 30801834 - 30801729
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    ||||| |||||||||||||| |||||| ||  |||||||||||| | |||||||||||||||||||| || | ||  |||||||  |||||||||| |||    
T  30801834 tgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacatttt 30801735  T
Q  196 ctcttt 201  Q
    ||||||    
T  30801734 ctcttt 30801729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 9563004 - 9563106
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| ||| | ||||||| ||||||| ||||| ||| ||| | |||||| |||||||| | |||||||| ||||||||| |||||||||||| |    
T  9563004 atgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctctct 9563103  T
Q  202 tct 204  Q
    |||    
T  9563104 tct 9563106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 36331407 - 36331325
Alignment:
Q  119 ttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||| ||||||| ||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 36331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 45058653 - 45058549
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||| ||| |||||| ||||||||||||| || ||||||||| |||||| ||||| ||| |||  ||||||| ||||||| | |||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatacttt 45058555  T
Q  196 ctcttt 201  Q
    ||||||    
T  45058554 ctcttt 45058549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 41080714 - 41080811
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| | |||| ||||||||| |||||||| ||||||| ||| | |||| || ||||||||  |||||||||| |||||||||    
T  41080714 atgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc-acacaagcacattttctcttt 41080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 36707519 - 36707421
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||| | |||||| || ||||||||||||| ||| |||||||||||| |||||||| |  ||||||| || ||    |||||||||||||||    
T  36707519 atgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc----gcacactttctcttt 36707424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 25395433 - 25395329
Alignment:
Q  97 gagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 196  Q
    ||||||||||||||| |||||||||  |||| ||||| || |||| |||||||||||||| ||||| ||||| |  | |||||  ||||| |||| ||||    
T  25395433 gagctatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttc 25395334  T
Q  197 tcttt 201  Q
    |||||    
T  25395333 tcttt 25395329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 48375802 - 48375702
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||| |||||||| |||||| || |||||||||| | || | ||| |||||||| ||||  |||| ||| ||||||| ||||||||||| ||||||||    
T  48375802 tatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctctt 48375703  T
Q  201 t 201  Q
    |    
T  48375702 t 48375702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 40480913 - 40480853
Alignment:
Q  125 ggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 186  Q
    |||||||||||||||| ||||||||||||| | ||||||||||| || |||||||| |||||    
T  40480913 ggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggaccctacacaa 40480853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 36331474 - 36331419
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaat 156  Q
    ||||||||||| ||| |||||||||||||| ||||| || ||| ||||||||||||    
T  36331474 tatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaat 36331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 53581793 - 53581847
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 179  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  53581793 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggaccc 53581847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 35965869 - 35965778
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| |||||||||  ||  |||||| ||||| ||||||||| |||||| ||||||||||        | ||||||||||||||||||||||||    
T  35965869 atgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgg--------atcctgcacaagcacactttctcttt 35965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 42823115 - 42823215
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| | |||  ||| ||||||||| || ||||||||| |||||| ||||| |||| ||  ||||||| ||| ||| | ||||||||||    
T  42823115 tatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctctt 42823214  T
Q  201 t 201  Q
    |    
T  42823215 t 42823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 52629993 - 52629938
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccct 180  Q
    ||||||||||||||||| ||||||||||||| | |||||||| || || ||||||||    
T  52629993 tggcaatacacccttta-cacccacacaaaattctgacacgtagcaacctggaccct 52629938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 28177773 - 28177882
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||| |||||| |||||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  195 tctcttttct 204  Q
    ||||||||||    
T  28177873 tctcttttct 28177882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 26720515 - 26720623
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||| |||| || |||||||||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  196 ctcttttct 204  Q
    |||||||||    
T  26720615 ctcttttct 26720623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 26990264 - 26990372
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||| |||| || |||||||||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  196 ctcttttct 204  Q
    |||||||||    
T  26990364 ctcttttct 26990372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 2740279 - 2740381
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||    
T  2740279 atgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 2740378  T
Q  202 tct 204  Q
    |||    
T  2740379 tct 2740381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 40145412 - 40145514
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  40145412 atgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 40145511  T
Q  202 tct 204  Q
    |||    
T  40145512 tct 40145514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 18520979 - 18520879
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 18520880  T
Q  202 t 202  Q
    |    
T  18520879 t 18520879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 33149733 - 33149631
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||    
T  33149733 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttt 33149634  T
Q  202 tct 204  Q
    |||    
T  33149633 tct 33149631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 36733037 - 36732935
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| | |||||||||||||| |||||||||||||||| |||||| | | ||||||||||| |||||||||||||||||||||    
T  36733037 atgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttctcttt 36732938  T
Q  202 tct 204  Q
    |||    
T  36732937 tct 36732935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 6679702 - 6679805
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||||| |||| |||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||||| |||||| |||| ||||||||    
T  6679702 tatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctctt 6679801  T
Q  201 ttct 204  Q
    ||||    
T  6679802 ttct 6679805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 15409706 - 15409603
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||| || |||||||  |||| |||||||||||||||| |||||||| ||||| ||||||| ||||||||||||| ||||||    
T  15409706 tatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctctt 15409607  T
Q  201 ttct 204  Q
    ||||    
T  15409606 ttct 15409603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 2252264 - 2252164
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  2252264 tatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 2252165  T
Q  201 t 201  Q
    |    
T  2252164 t 2252164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 13811659 - 13811755
Alignment:
Q  104 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 35785204 - 35785306
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  ||||||| || |||||| ||||||||||||||    
T  35785204 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttctcttt 35785303  T
Q  202 tct 204  Q
    |||    
T  35785304 tct 35785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 42414397 - 42414295
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |  ||| |||||||||||||||| |||||||||||||||| |||||||| | || |||||||| ||||||||||||||| |||||    
T  42414397 atgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttt 42414298  T
Q  202 tct 204  Q
    |||    
T  42414297 tct 42414295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 3921361 - 3921261
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  3921361 tatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 3921262  T
Q  201 t 201  Q
    |    
T  3921261 t 3921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 14831819 - 14831919
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||||||| |||||| |||||||| | |||||||| || ||||||||||||||||| |||    
T  14831819 atgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttcttttt 14831918  T
Q  202 t 202  Q
    |    
T  14831919 t 14831919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 20073611 - 20073516
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    |||||| ||||||||| ||||||| ||||||||||||| |||| |||| |||||| |  |||||| ||||||||||||||||||||||||||||||    
T  20073611 atgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttct 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 35943988 - 35943888
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| |  ||||||| ||  |||||||||||||||||||    
T  35943988 tatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctctt 35943889  T
Q  201 t 201  Q
    |    
T  35943888 t 35943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 31008992 - 31009088
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    ||||||||||| |||||||||| || |||||||  |||  |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||    
T  31008992 tatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 33825419 - 33825319
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||| ||||||||| ||||| ||||||||||| | || ||||||||| |||||| |||||||||  || ||| ||| | ||||||||||||||||||||    
T  33825419 atgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctcttt 33825320  T
Q  202 t 202  Q
    |    
T  33825319 t 33825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 36875698 - 36875607
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||         | |||||||| || |||||||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaata---------gtcacgtggatcccgcacaagcacactttctcttt 36875608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 6260096 - 6259997
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| ||| || ||| || |||||||||||||||||||||| ||||||| | |||| ||| ||| ||||||   || |||||||||||||||||    
T  6260096 atgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttctcttt 6259997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 10356637 - 10356694
Alignment:
Q  100 ctatgatacatagacatccttagatggcaataca-ccctttaacacccacacaaaaat 156  Q
    ||||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||    
T  10356637 ctatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaat 10356694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 38296207 - 38296304
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctc 198  Q
    ||||||||||||||   ||||| || |||||||||  |||| ||||||||||||||  ||||||| || ||||||| ||  |||||||||||||||||    
T  38296207 tatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 21370048 - 21370108
Alignment:
Q  141 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||| ||||||| ||||| |||| ||||||||||| |||||| |||| |||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctcttt 21370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 39688993 - 39688893
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||  |||||||||| || || |||||||||||||||| ||| | |||| ||  || |||| ||| ||| ||||||||||||    
T  39688993 tatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttctctt 39688894  T
Q  201 t 201  Q
    |    
T  39688893 t 39688893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 9603818 - 9603917
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| |||||||||| ||  ||||||| | || ||||| |||||||||| |||||| ||| ||  |||||||   |||| ||||||||||||||    
T  9603818 atgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttctcttt 9603917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 16327906 - 16328005
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||| | |||||||| |||||||||| || || ||||||||| |||||| |||||||||  || ||| |||   |||||||||||||| |||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttcttt 16328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 31132392 - 31132451
Alignment:
Q  145 ccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 204  Q
    |||||||||||| ||||| || | ||||||||||| ||||||||| ||||| ||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttct 31132451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 41470508 - 41470425
Alignment:
Q  105 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagc 188  Q
    ||||||||||| | |||| |||||||||| ||||||| |  || | |||||| |||||||| | ||||||||||| ||||||||    
T  41470508 atacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 39557586 - 39557512
Alignment:
Q  128 aatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctttt 202  Q
    ||||||||  |||||| |||||||||||| |||||||||  ||| |||||||   |||| |||||||||||||||    
T  39557586 aatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctctttt 39557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 2e-35; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 31976252 - 31976355
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| || |||| ||||||||||||||||||||    
T  31976252 tatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctctt 31976351  T
Q  201 ttct 204  Q
    ||||    
T  31976352 ttct 31976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 32869685 - 32869785
Alignment:
Q  104 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttc 203  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttc 32869784  T
Q  204 t 204  Q
    |    
T  32869785 t 32869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 22880753 - 22880651
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||| | |||||||| | ||||||||||| |||||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T
Q  202 tct 204  Q
    |||    
T  22880653 tct 22880651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 17598559 - 17598661
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  17598559 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttctcttt 17598658  T
Q  202 tct 204  Q
    |||    
T  17598659 tct 17598661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 31110855 - 31110754
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||| |||||||||||||||| |||| ||||  ||||| ||||||||  |||| ||||||||||||||||||||||||||||    
T  31110855 tatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcacactttctctt 31110758  T
Q  201 ttct 204  Q
    ||||    
T  31110757 ttct 31110754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 29857832 - 29857934
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||| |  ||||||| || ||| |||||||||||||||||    
T  29857832 atgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttt 29857931  T
Q  202 tct 204  Q
    |||    
T  29857932 tct 29857934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 11427621 - 11427725
Alignment:
Q  102 atgatacatagacatcct--tagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctct 199  Q
    |||||||||||||| |||  ||| |||||||||| ||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||    
T  11427621 atgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 11427720  T
Q  200 tttct 204  Q
    |||||    
T  11427721 tttct 11427725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 15508125 - 15508020
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  196 ctcttt 201  Q
    ||||||    
T  15508025 ctcttt 15508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 15990138 - 15990038
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  15990138 tatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 15990039  T
Q  201 t 201  Q
    |    
T  15990038 t 15990038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 30341456 - 30341356
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  30341456 tatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 30341357  T
Q  201 t 201  Q
    |    
T  30341356 t 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 6209560 - 6209458
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||  ||| |||| ||||||||||| || ||||| | ||||||||||| |||| ||||||||||||||||    
T  6209560 atgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttctcttt 6209461  T
Q  202 tct 204  Q
    |||    
T  6209460 tct 6209458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 4231547 - 4231652
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| |||||| |||| ||||| |||| ||||||||||||| ||  ||||||||||||||| |||||||||||||  ||||||| ||||||| |||||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacacttt 4231646  T
Q  196 ctcttt 201  Q
    ||||||    
T  4231647 ctcttt 4231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 31109488 - 31109393
Alignment:
Q  109 atagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 204  Q
    ||||||| |||||| |||||||||||||||| ||| |||||||||||| |||||||| | ||||| ||||| ||| ||| ||||||||||||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttttct 31109393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 9379809 - 9379708
Alignment:
Q  100 ctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctct 199  Q
    |||||||||||||||||||||||||| ||||||| || || ||||||| |||||||| ||||||||||||| ||||| |   ||||| |||| |||||||    
T  9379809 ctatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctct 9379710  T
Q  200 tt 201  Q
    ||    
T  9379709 tt 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 28536581 - 28536483
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| |||||||||| |||||||||| || || |||||||||||||||| ||||||  || || ||||||||  ||||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctcttt 28536484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 23128196 - 23128120
Alignment:
Q  128 aatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 204  Q
    |||||| ||||| |||||||||||||||| |||||||| | |||||||| ||  |||||||||||||||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttct 23128120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 31953134 - 31953026
Alignment:
Q  93 acatgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacac 192  Q
    |||||||  |||||| |||||||||||||| ||||||||||||| || ||||||||| |||||| ||||| |||  || |||||||   ||||| |||||    
T  31953134 acatgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacac 31953035  T
Q  193 tttctcttt 201  Q
    |||||||||    
T  31953034 tttctcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 15832582 - 15832682
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| | |||| || ||||| | | ||| |||||||||||||||| |||||||| | |||||||| |||||||||  ||| |||||||||    
T  15832582 atgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttctcttt 15832681  T
Q  202 t 202  Q
    |    
T  15832682 t 15832682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 946383 - 946483
Alignment:
Q  104 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttc 203  Q
    ||||||||||||||||||| ||  |||||||||||| ||||| || ||||||| |||||| | | |||||  | || || | ||||||||||||||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctcttttc 946482  T
Q  204 t 204  Q
    |    
T  946483 t 946483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 12732487 - 12732586
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||| ||||  |||||||| |  | || |||||||||||||||| ||||||||||| | ||||| ||  || ||||||| |||||||||    
T  12732487 atgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttctcttt 12732586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 26669944 - 26669996
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggac 177  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||    
T  26669944 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggac 26669996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 7367714 - 7367671
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 168  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  7367714 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 7367671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 2e-35; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 50052523 - 50052424
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  50052523 atgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 50052424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 11511557 - 11511455
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||| |||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  11511557 atgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 11511458  T
Q  202 tct 204  Q
    |||    
T  11511457 tct 11511455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 48183144 - 48183042
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  48183144 atgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 48183045  T
Q  202 tct 204  Q
    |||    
T  48183044 tct 48183042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 31910191 - 31910299
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| |||||||||||||||||||||| || |||||||| |||| |||||||||||||||| |||||| | ||||| ||||||| |||||||||||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  196 ctcttttct 204  Q
    |||||||||    
T  31910291 ctcttttct 31910299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 480542 - 480440
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | |||||||||||||||||||    
T  480542 atgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 480443  T
Q  202 tct 204  Q
    |||    
T  480442 tct 480440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 6034049 - 6034151
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||| || | |||||||| || |||||||||||||||||||||    
T  6034049 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 6034148  T
Q  202 tct 204  Q
    |||    
T  6034149 tct 6034151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 29234340 - 29234238
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| ||||||||||||||||||||||| | |||  ||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  29234340 atgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 29234241  T
Q  202 tct 204  Q
    |||    
T  29234240 tct 29234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 41236352 - 41236454
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  41236352 atgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 41236451  T
Q  202 tct 204  Q
    |||    
T  41236452 tct 41236454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 42044462 - 42044360
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||| ||||  |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  42044462 atgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 42044363  T
Q  202 tct 204  Q
    |||    
T  42044362 tct 42044360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 55475195 - 55475295
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||  ||||||||||| ||| ||||||||||||    
T  55475195 tatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttctctt 55475294  T
Q  201 t 201  Q
    |    
T  55475295 t 55475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 24995202 - 24995100
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||| |||||| |||||||| | ||||||||||| ||||||||||| |||||||||    
T  24995202 atgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttt 24995103  T
Q  202 tct 204  Q
    |||    
T  24995102 tct 24995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 40574777 - 40574886
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||  || || |||| || | ||||||||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactt 40574876  T
Q  195 tctcttttct 204  Q
    ||||||||||    
T  40574877 tctcttttct 40574886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 50526266 - 50526171
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||  | |||||||||| ||||||    
T  50526266 atgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttct 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 54473628 - 54473526
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| | |||||| | ||||||||||| ||||||||||||||| |||||    
T  54473628 atgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttatcttt 54473529  T
Q  202 tct 204  Q
    |||    
T  54473528 tct 54473526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 3481659 - 3481758
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| | |||| ||||||||||| |||| |||||||||||||||| |||||| | | |||||||||||  ||||||||||||||||||||    
T  3481659 atgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttctcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 29239891 - 29239990
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| | |||||| | |||||||||||  ||||||||||||||||||||    
T  29239891 atgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttctcttt 29239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 19670812 - 19670712
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || |||| ||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  19670812 tatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 19670713  T
Q  201 t 201  Q
    |    
T  19670712 t 19670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 23608240 - 23608340
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||||||| ||||||||| ||||||||| ||| |||||||||||||||| |||||||| | |||||| || |  ||||||||||||||||||||    
T  23608240 atgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttctcttt 23608339  T
Q  202 t 202  Q
    |    
T  23608340 t 23608340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 32766962 - 32767062
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||  ||||| ||||||||||||| || ||||||| |||||||| ||||| |||||||  ||||||||||||||| ||||||||||||    
T  32766962 tatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttctctt 32767061  T
Q  201 t 201  Q
    |    
T  32767062 t 32767062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 41823920 - 41823989
Alignment:
Q  135 cctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 204  Q
    |||||||||||||||||||||| |||||||| | ||| ||||||| ||||||||||||||||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttct 41823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 17983823 - 17983739
Alignment:
Q  117 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 17983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 47986212 - 47986312
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| |||||||||| || || ||| |||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  47986212 tatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 47986311  T
Q  201 t 201  Q
    |    
T  47986312 t 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 29977890 - 29977989
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| | | || ||| ||||||||||||| ||||||||||||||||||| |||||||| | ||  |||||||  ||||||||||||||||||||    
T  29977890 atgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 53352661 - 53352559
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| || |||||||  |||||||||| |||||||||| |||||||| |  | |||||||| ||||||||| ||||||||||    
T  53352661 tatgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctctt 53352563  T
Q  201 ttct 204  Q
    ||||    
T  53352562 ttct 53352559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 8343259 - 8343159
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||| |||||||||| ||||| ||||| ||| |||||| ||||| |||||||  ||||||| ||| ||| | ||||||||||    
T  8343259 tatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttctctt 8343160  T
Q  201 t 201  Q
    |    
T  8343159 t 8343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 29548055 - 29547955
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||| |||||||||| || || |||||||||||||||| ||||| |||||||  |||| || ||| ||| ||||||| ||||    
T  29548055 tatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttttctt 29547956  T
Q  201 t 201  Q
    |    
T  29547955 t 29547955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 48647822 - 48647722
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||| ||||| |||||||||| |  |||||||||  |||||||||||| |||||| | |||||||| ||||||||| | ||||||||||| ||||||||    
T  48647822 tatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctctt 48647723  T
Q  201 t 201  Q
    |    
T  48647722 t 48647722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 50813988 - 50813888
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||  ||||| ||| ||||||||| || |||||||||||||||| ||||| |||| ||  || |||| ||||||| ||||||||||||    
T  50813988 tatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctctt 50813889  T
Q  201 t 201  Q
    |    
T  50813888 t 50813888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 47104549 - 47104614
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 167  Q
    |||||| |||||||| |||||||| |||||||| || | |||||||||||||||| ||||||||||    
T  47104549 atgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtgg 47104614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 55079810 - 55079709
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga-ccctgcacaagcacactttctct 199  Q
    ||||||||||| ||| |||||| ||||||||||||  || ||||||| |||||||| ||||| |||||||  |||| |||  |||||| |||||||||||    
T  55079810 tatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacactttctct 55079711  T
Q  200 tt 201  Q
    ||    
T  55079710 tt 55079709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 29589831 - 29589736
Alignment:
Q  105 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||| ||| |||||| || |||||||||| || |||||||||||||||| ||| | |||||||  |||||||  |||||| |||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctcttt 29589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 18769113 - 18769179
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 167  Q
    ||||||||||| |||||||||  |  | ||||||||| |||||||||||||||||| ||||||||||    
T  18769113 tatgatacataaacatccttatgtacccatacaccctctaacacccacacaaaaatctgacacgtgg 18769179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 28480360 - 28480267
Alignment:
Q  105 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctc 198  Q
    ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  ||||| |||||||||||    
T  28480360 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 28481235 - 28481142
Alignment:
Q  105 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctc 198  Q
    ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  ||||| |||||||||||    
T  28481235 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 28482110 - 28482017
Alignment:
Q  105 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctc 198  Q
    ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  ||||| |||||||||||    
T  28482110 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 33703307 - 33703245
Alignment:
Q  123 atggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 186  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| || |||| || ||||||    
T  33703307 atggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggatcccgcacaa 33703245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 18924597 - 18924491
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| |||||| |||| | | |||||| ||||||||||||| || | | |||||||||||| ||||| ||||| |  || || | ||||||| ||||||    
T  18924597 atgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactt 18924498  T
Q  195 tctcttt 201  Q
    |||||||    
T  18924497 tctcttt 18924491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 29535376 - 29535480
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| |||||||||||||||  ||||| || ||||||| |  ||   | ||||||||||||||| ||| |||||||||||| ||  ||||| ||||||||    
T  29535376 tgagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacacttt 29535474  T
Q  196 ctcttt 201  Q
    ||||||    
T  29535475 ctcttt 29535480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 4854958 - 4854856
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||| | |||||||| |||||||||||||||||||||||||||||    
T  4854958 atgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttctcttt 4854859  T
Q  202 tct 204  Q
    |||    
T  4854858 tct 4854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 43414683 - 43414574
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||| ||| |||| || ||||||||||||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactt 43414584  T
Q  195 tctcttttct 204  Q
    ||||||||||    
T  43414583 tctcttttct 43414574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 12831052 - 12831154
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  12831052 atgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 12831151  T
Q  202 tct 204  Q
    |||    
T  12831152 tct 12831154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 15048282 - 15048177
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||| ||||| ||||||| |||||||||||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  196 ctctttt 202  Q
    |||||||    
T  15048183 ctctttt 15048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 15197338 - 15197440
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||  ||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  15197338 atgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 15197437  T
Q  202 tct 204  Q
    |||    
T  15197438 tct 15197440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 14547929 - 14548029
Alignment:
Q  104 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttc 203  Q
    |||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttc 14548028  T
Q  204 t 204  Q
    |    
T  14548029 t 14548029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 10621183 - 10621080
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||| ||||| | || || ||||||||||||||||||||    
T  10621183 tatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctctt 10621084  T
Q  201 ttct 204  Q
    ||||    
T  10621083 ttct 10621080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 504216 - 504114
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||| ||||||||    
T  504216 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattctcttt 504117  T
Q  202 tct 204  Q
    |||    
T  504116 tct 504114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 34012391 - 34012289
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||    
T  34012391 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttt 34012292  T
Q  202 tct 204  Q
    |||    
T  34012291 tct 34012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 5957835 - 5957934
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||| ||||||||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctcttt 5957934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 37038484 - 37038579
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||    
T  37038484 atgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 23122692 - 23122590
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||  |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| ||| |||||||||||||||||    
T  23122692 atgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttt 23122593  T
Q  202 tct 204  Q
    |||    
T  23122592 tct 23122590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 40424038 - 40423936
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||| | |||||| |||||||||||||||| ||| |||||||||||| |||||||| | || |||||||| |||||||||||||||||||||    
T  40424038 atgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 40423939  T
Q  202 tct 204  Q
    |||    
T  40423938 tct 40423936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 44507182 - 44507080
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||| |||||||| | ||||||||||| | ||||||| |||||||||||    
T  44507182 atgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttctcttt 44507083  T
Q  202 tct 204  Q
    |||    
T  44507082 tct 44507080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 10284727 - 10284627
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||  || |||||||| |||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||    
T  10284727 tatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctctt 10284628  T
Q  201 t 201  Q
    |    
T  10284627 t 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 1180035 - 1179933
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | || |||||  | |||||||||||||||||||||    
T  1180035 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttctcttt 1179936  T
Q  202 tct 204  Q
    |||    
T  1179935 tct 1179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 16383381 - 16383481
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  16383381 tatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 16383480  T
Q  201 t 201  Q
    |    
T  16383481 t 16383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 8841512 - 8841428
Alignment:
Q  117 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||||| |||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||||||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 8841428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 20075029 - 20074938
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||| |||        |||||||||||||||||||||||||||||||||    
T  20075029 atgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtga--------cacgtggaccctgcacaagcacactttctcttt 20074938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 15259025 - 15258925
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||| |  |||||||||||||||| || |  ||| ||||| |||||| ||||| |||| ||||||||||||||||||||||| ||||||||    
T  15259025 tatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctctt 15258926  T
Q  201 t 201  Q
    |    
T  15258925 t 15258925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 16056497 - 16056397
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||  || ||||||| || || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  16056497 tatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 16056398  T
Q  201 t 201  Q
    |    
T  16056397 t 16056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 24307889 - 24307789
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| |||||||||| || || |||||||||||||||| ||| | |||||||  ||||||| ||||||| ||||||||||||    
T  24307889 tatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctctt 24307790  T
Q  201 t 201  Q
    |    
T  24307789 t 24307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 34307220 - 34307320
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||| ||  || |||| ||||||| ||||||||||||    
T  34307220 tatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctctt 34307319  T
Q  201 t 201  Q
    |    
T  34307320 t 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 30479570 - 30479470
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| |||||||||||||||| ||| ||||| |||||| ||||| ||||| |  ||||||  ||||||| ||||||||||||    
T  30479570 tatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttctctt 30479471  T
Q  201 t 201  Q
    |    
T  30479470 t 30479470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 32032729 - 32032828
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| |||||||||| |||| | || |||||||||||| ||||| |||||||  |||| |||||||||| ||||||||||||    
T  32032729 tatgatacataaacacccttaggtggcaatacatccttga-catccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttctctt 32032827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 9122229 - 9122292
Alignment:
Q  141 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 204  Q
    |||||||||||||||| ||||| || | |||||||| || ||||||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttct 9122292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 17443829 - 17443929
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  |||||  ||||||||||||    
T  17443829 tatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttctctt 17443928  T
Q  201 t 201  Q
    |    
T  17443929 t 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 29705527 - 29705466
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 186  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || ||||||| ||||||    
T  29705527 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 24307633 - 24307702
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggcca 170  Q
    ||||||||||| ||| |||||| |||||||||| || || |||||||||||||||| ||| | |||||||    
T  24307633 tatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggcca 24307702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 38229472 - 38229532
Alignment:
Q  141 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||| ||||| |||| ||||||||  ||| ||||||||| |||||||||    
T  38229472 acacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctcttt 38229532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 42221520 - 42221619
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||| |||||||||| || |||||||  | |  |||||||||||||||| ||||||||   ||  |||||||   |||||||||||||||||||    
T  42221520 atgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctcttt 42221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 2547161 - 2547118
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 168  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  2547161 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 2547118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 42197370 - 42197413
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 168  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  42197370 tggcaatacacccttta-cacccacacaaaattttgacacgtggc 42197413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 6e-33; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 19329838 - 19329949
Alignment:
Q  93 acatgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacac 192  Q
    |||||||  ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||   ||||||||||| ||||||||||||    
T  19329838 acatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacac 19329937  T
Q  193 tttctcttttct 204  Q
    ||||||||||||    
T  19329938 tttctcttttct 19329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 35522880 - 35522983
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||||||    
T  35522880 tatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctctt 35522979  T
Q  201 ttct 204  Q
    ||||    
T  35522980 ttct 35522983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 3434567 - 3434669
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |||||||| | |||||||| || |||||||||||||||||||||    
T  3434567 atgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3434666  T
Q  202 tct 204  Q
    |||    
T  3434667 tct 3434669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 7389394 - 7389496
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||||||||||| |||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  7389394 atgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 7389493  T
Q  202 tct 204  Q
    |||    
T  7389494 tct 7389496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 46374898 - 46374808
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 191  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  46374898 tatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 8080478 - 8080376
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||| ||||| ||| |||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  8080478 atgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 8080379  T
Q  202 tct 204  Q
    |||    
T  8080378 tct 8080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 36362008 - 36361906
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||| ||||| |||||||||||||||| |||||||| | |||||||||||  ||||||||||||||||||||    
T  36362008 atgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 36361909  T
Q  202 tct 204  Q
    |||    
T  36361908 tct 36361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 38267045 - 38267147
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||  || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  38267045 atgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 38267144  T
Q  202 tct 204  Q
    |||    
T  38267145 tct 38267147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 38837222 - 38837324
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||||||||  ||||| |||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  38837222 atgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 38837321  T
Q  202 tct 204  Q
    |||    
T  38837322 tct 38837324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 4999609 - 4999509
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||| |||| | ||||||||||| |||||| ||||||||||||||    
T  4999609 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttctcttt 4999510  T
Q  202 t 202  Q
    |    
T  4999509 t 4999509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 3784000 - 3784102
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T
Q  202 tct 204  Q
    |||    
T  3784100 tct 3784102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 19436282 - 19436180
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||||||||| || ||||||||| ||| |||||||||||||||| |||||||| | |||||||| || ||| |||||||||||||||||    
T  19436282 atgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttctcttt 19436183  T
Q  202 tct 204  Q
    |||    
T  19436182 tct 19436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 32951588 - 32951486
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||  |||||||| ||||||| ||||||||| |||||||||||| | |||||| | ||||||||||| |||||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 32951489  T
Q  202 tct 204  Q
    |||    
T  32951488 tct 32951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 35137538 - 35137640
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||| ||||||||||||||    
T  35137538 atgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttt 35137637  T
Q  202 tct 204  Q
    |||    
T  35137638 tct 35137640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 36362031 - 36362133
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||| |||||| ||||| |||||||||||||||| |||||||| | |||||||||||  ||||||||||||||||||||    
T  36362031 atgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 36362130  T
Q  202 tct 204  Q
    |||    
T  36362131 tct 36362133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 21234399 - 21234504
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| |||||||||||||||||||||| || ||||||||||||| |||| ||||||||||| |||||||| ||||| || |||| ||||||||||| ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  195 tctctt 200  Q
    ||||||    
T  21234499 tctctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 31735882 - 31735984
Alignment:
Q  95 atgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 194  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||||| |||| || ||||||||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaa-------acacgtggccacatggatcccgcacaagcacactt 31735974  T
Q  195 tctcttttct 204  Q
    ||||||||||    
T  31735975 tctcttttct 31735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 26296648 - 26296751
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    |||||||||||||||||||||| || ||||| ||||||||||| ||||| |||||| ||| |||||||||  ||||||| |||||||| || ||||||||    
T  26296648 tatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttctctt 26296747  T
Q  201 ttct 204  Q
    ||||    
T  26296748 ttct 26296751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 35468950 - 35468851
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||||||||||||||||||| | ||| ||||||||| |||||| | | | ||| ||| ||||||||||||||| ||||||||||||||    
T  35468950 atgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttctcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 46033897 - 46033794
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||| |||||||||| ||| || || | ||||||||| | ||||||||    
T  46033897 tatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttctctt 46033798  T
Q  201 ttct 204  Q
    ||||    
T  46033797 ttct 46033794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 3694372 - 3694474
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||| ||| ||| |||||| || ||||||||| |||||||||||||||||||| |||||||| | || ||||| || |||||||||||||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttt 3694471  T
Q  202 tct 204  Q
    |||    
T  3694472 tct 3694474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 40957712 - 40957814
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||||  ||||| ||||||||||| |||| | |||||||||||||| |||||||| | |||||||| || | |||||||||||||||||||    
T  40957712 atgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttctcttt 40957811  T
Q  202 tct 204  Q
    |||    
T  40957812 tct 40957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 22343365 - 22343465
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| ||| |||  ||||||| ||||||| ||||||||||||    
T  22343365 tatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctt 22343464  T
Q  201 t 201  Q
    |    
T  22343465 t 22343465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 36208177 - 36208277
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| ||| ||||||  | || |||||||||||||||  ||||| |||| ||||||||||||||||||||||| ||||||||    
T  36208177 tatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttctctt 36208276  T
Q  201 t 201  Q
    |    
T  36208277 t 36208277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 41915745 - 41915845
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || ||||| |||||||||| ||||| |||||||  ||||||| ||||||| ||||||||||||    
T  41915745 tatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 41915844  T
Q  201 t 201  Q
    |    
T  41915845 t 41915845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 32564527 - 32564422
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||| ||||| ||||| |  ||||||| ||||||  |||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacacttt 32564428  T
Q  196 ctcttt 201  Q
    ||||||    
T  32564427 ctcttt 32564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 18207184 - 18207283
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| |||||| ||||||||||||  || ||||||| |||||||| | |||||||| |||||| ||||  |||||||||||||||||||    
T  18207184 tatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttctctt 18207282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 38044201 - 38044301
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| ||| |||||| ||||||||||||| || ||| |||||||||||| ||||| || ||||  ||||||| ||||||| ||||||||||||    
T  38044201 tatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttctctt 38044300  T
Q  201 t 201  Q
    |    
T  38044301 t 38044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 8238210 - 8238317
Alignment:
Q  95 atgagctatgatacatagacatcct-tagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacact 193  Q
    ||||| ||||||||||| ||| ||| ||| |||||||||||||||| |||||||||||||||| ||||| || | ||  ||||||| ||||||| |||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  194 ttctcttt 201  Q
    ||||||||    
T  8238310 ttctcttt 8238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 39256024 - 39255920
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||||||| |||||| ||||||||||||  || | ||||| |||||||| |||||||||| ||||||||| |  |||||| |||||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacacttt 39255926  T
Q  196 ctcttt 201  Q
    ||||||    
T  39255925 ctcttt 39255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 41423681 - 41423786
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||||||||||||| |||||||| ||||||||  || ||||  |||||||||| ||||| |||| ||||| || || | ||||||| | |||    
T  41423681 tgagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatatttt 41423780  T
Q  196 ctcttt 201  Q
    ||||||    
T  41423781 ctcttt 41423786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 40846209 - 40846109
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||| |||||||||| ||||||||||||| || ||| |||||||||||| | ||| || |  |  ||||||| ||||||  ||||||||||||    
T  40846209 tatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttctctt 40846110  T
Q  201 t 201  Q
    |    
T  40846109 t 40846109  T

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Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 10343658 - 10343559
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| |||||| ||| |||||||   || |||||||||||||||| |||||| ||    ||||||| ||||| | |||||||||||||||    
T  10343658 atgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacacatgtttccgtggactctgcagacgcacactttctcttt 10343559  T

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Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 27744375 - 27744307
Alignment:
Q  131 acaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctct 199  Q
    ||||||||| | |||||||||||||| ||||| ||||||||||||| ||  || ||||||| |||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 2318338 - 2318239
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||  ||| || ||| |||||| |||||  || |||||||||||||||| ||||  |||| |||||||||||  || ||||| |||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T

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Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 32029752 - 32029806
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 179  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  32029752 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 32029806  T

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Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 16374894 - 16374820
Alignment:
Q  127 caatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||| || || ||| |||||||||||| |||||||||| |||||||| |   ||||||||||| ||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctcttt 16374820  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 7727910 - 7728006
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 197  Q
    ||||||||||| ||| |||||| ||| ||||||||  || |||  |||| |||||| ||||| |||| ||  ||||||| ||||||| |||||||||    
T  7727910 tatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttct 7728006  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 11044193 - 11044237
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacaccc 146  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||||    
T  11044193 atgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

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Target: scaffold0237 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 4034 - 4136
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||| |  ||||||| || ||| |||||||||||||||||    
T  4034 atgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttt 4133  T
Q  202 tct 204  Q
    |||    
T  4134 tct 4136  T

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Target: scaffold1268 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 1024 - 925
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||||||| | |||||| | || |||||||||||||||||||||    
T  1024 atgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctcttt 925  T

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Target: scaffold1267 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 1024 - 925
Alignment:
Q  102 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||||||| | |||||| | || |||||||||||||||||||||    
T  1024 atgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctcttt 925  T

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Target: scaffold0321 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 10205 - 10102
Alignment:
Q  101 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 200  Q
    ||||||||||||||| | |||| |||||||||| ||||| ||| ||||| |||||| |||||||| | ||||||||||  | ||||||||||||||||||    
T  10205 tatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctctt 10106  T
Q  201 ttct 204  Q
    ||||    
T  10105 ttct 10102  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 8964 - 8859
Alignment:
Q  96 tgagctatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 195  Q
    |||| ||||||| |||||||||||||  || ||||||||  ||| ||| | |||||||||| |||||| | | |||||||||||  |||||| ||| |||    
T  8964 tgagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacatttt 8865  T
Q  196 ctcttt 201  Q
    ||||||    
T  8864 ctcttt 8859  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 152525 - 152602
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    ||||||||||||| || |||||||||||||||| ||||| |||| ||  |||| || ||||||  |||||||||||||    
T  152525 tggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctcttt 152602  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 17102 - 17158
Alignment:
Q  145 ccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 201  Q
    |||||||||||| ||||| |||| ||| ||||||| ||||||||||| |||||||||    
T  17102 ccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 17158  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 850 - 798
Alignment:
Q  124 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggac 177  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||    
T  850 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggac 798  T

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