View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18010_low_1 (Length: 237)

Name: NF18010_low_1
Description: NF18010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18010_low_1
NF18010_low_1
[»] chr3 (76 HSPs)
chr3 (63-237)||(9266972-9267148)
chr3 (65-237)||(35995677-35995851)
chr3 (65-237)||(17465366-17465541)
chr3 (65-237)||(19112763-19112938)
chr3 (65-237)||(16722196-16722370)
chr3 (67-205)||(52552927-52553065)
chr3 (63-237)||(14262033-14262209)
chr3 (132-237)||(4204774-4204881)
chr3 (65-237)||(21633101-21633275)
chr3 (63-237)||(20853692-20853869)
chr3 (62-237)||(30500039-30500214)
chr3 (65-237)||(33372611-33372783)
chr3 (133-237)||(43572596-43572702)
chr3 (63-234)||(14171584-14171756)
chr3 (64-205)||(14262275-14262416)
chr3 (64-237)||(45970120-45970296)
chr3 (65-205)||(14171825-14171965)
chr3 (65-205)||(33372405-33372545)
chr3 (66-234)||(14162079-14162248)
chr3 (133-237)||(38283755-38283861)
chr3 (65-237)||(45003701-45003874)
chr3 (132-237)||(15328665-15328772)
chr3 (65-187)||(43572388-43572510)
chr3 (63-205)||(45969912-45970054)
chr3 (65-205)||(9267214-9267353)
chr3 (65-237)||(49986733-49986907)
chr3 (66-205)||(5800605-5800744)
chr3 (132-237)||(52552758-52552865)
chr3 (63-205)||(16721988-16722130)
chr3 (63-205)||(35995917-35996056)
chr3 (64-204)||(30500281-30500420)
chr3 (66-234)||(5800813-5800982)
chr3 (64-187)||(11003730-11003853)
chr3 (66-205)||(14161871-14162010)
chr3 (66-205)||(19113004-19113143)
chr3 (66-209)||(45003496-45003639)
chr3 (65-187)||(20853953-20854074)
chr3 (61-205)||(21632896-21633035)
chr3 (65-187)||(49986526-49986649)
chr3 (66-166)||(19720333-19720433)
chr3 (64-193)||(17465618-17465747)
chr3 (135-205)||(47575511-47575581)
chr3 (77-204)||(38283561-38283688)
chr3 (132-204)||(45058731-45058803)
chr3 (132-237)||(47575339-47575445)
chr3 (135-205)||(15328529-15328599)
chr3 (65-182)||(36990922-36991038)
chr3 (65-182)||(37016362-37016478)
chr3 (144-185)||(16722173-16722214)
chr3 (132-177)||(17649277-17649322)
chr3 (65-122)||(27946187-27946244)
chr3 (61-205)||(35741824-35741967)
chr3 (144-185)||(49986710-49986751)
chr3 (134-202)||(32998376-32998444)
chr3 (134-182)||(35740883-35740931)
chr3 (139-181)||(1068912-1068954)
chr3 (144-185)||(9267130-9267171)
chr3 (144-185)||(19112920-19112961)
chr3 (144-185)||(21633078-21633119)
chr3 (140-185)||(35995833-35995878)
chr3 (140-185)||(38283728-38283773)
chr3 (144-185)||(45970097-45970138)
chr3 (140-185)||(47575427-47575472)
chr3 (145-185)||(14262191-14262231)
chr3 (71-122)||(27946114-27946165)
chr3 (71-113)||(1067719-1067761)
chr3 (147-185)||(17465523-17465561)
chr3 (144-185)||(5800787-5800828)
chr3 (144-185)||(14162053-14162094)
chr3 (144-185)||(14171741-14171782)
chr3 (144-185)||(15328642-15328683)
chr3 (148-185)||(20853851-20853888)
chr3 (144-185)||(43572573-43572614)
chr3 (144-185)||(52552847-52552888)
chr3 (153-205)||(4204947-4204999)
chr3 (145-185)||(45003679-45003719)
[»] chr1 (57 HSPs)
chr1 (64-237)||(39711277-39711452)
chr1 (64-237)||(39826048-39826223)
chr1 (64-237)||(34749136-34749310)
chr1 (65-236)||(33628689-33628862)
chr1 (64-237)||(4906960-4907135)
chr1 (66-237)||(52058011-52058184)
chr1 (64-237)||(17606513-17606686)
chr1 (63-187)||(24467626-24467749)
chr1 (64-237)||(29696768-29696937)
chr1 (65-237)||(48072166-48072340)
chr1 (66-237)||(30299436-30299609)
chr1 (66-226)||(24467843-24468002)
chr1 (69-209)||(17606307-17606451)
chr1 (64-193)||(52058259-52058388)
chr1 (63-187)||(18462283-18462406)
chr1 (132-237)||(39970712-39970819)
chr1 (59-226)||(18462500-18462669)
chr1 (133-237)||(42510081-42510187)
chr1 (59-237)||(20995874-20996052)
chr1 (66-178)||(39826312-39826424)
chr1 (66-205)||(4907201-4907340)
chr1 (66-205)||(39711074-39711211)
chr1 (64-229)||(8293020-8293188)
chr1 (63-204)||(33628930-33629071)
chr1 (66-205)||(8292804-8292943)
chr1 (66-205)||(34749344-34749483)
chr1 (64-204)||(30299230-30299369)
chr1 (66-203)||(39970886-39971024)
chr1 (68-205)||(43539349-43539486)
chr1 (77-202)||(48071972-48072097)
chr1 (135-237)||(13229936-13230040)
chr1 (136-237)||(7473862-7473965)
chr1 (65-205)||(29696564-29696703)
chr1 (65-184)||(30252158-30252279)
chr1 (138-237)||(43539552-43539653)
chr1 (66-202)||(18342261-18342395)
chr1 (89-204)||(16294187-16294302)
chr1 (78-205)||(17501969-17502095)
chr1 (144-187)||(42510167-42510210)
chr1 (145-185)||(34749292-34749332)
chr1 (133-205)||(42510253-42510325)
chr1 (145-185)||(48072144-48072184)
chr1 (147-185)||(13229916-13229954)
chr1 (144-185)||(4907117-4907158)
chr1 (144-185)||(17606490-17606531)
chr1 (65-122)||(20995697-20995754)
chr1 (144-205)||(20995747-20995808)
chr1 (144-185)||(29696745-29696786)
chr1 (144-185)||(33628845-33628886)
chr1 (144-185)||(39711254-39711295)
chr1 (149-185)||(30299418-30299454)
chr1 (149-185)||(39970801-39970837)
chr1 (65-182)||(27039637-27039753)
chr1 (144-185)||(20995851-20995892)
chr1 (133-165)||(215191-215223)
chr1 (145-185)||(39826205-39826245)
chr1 (145-185)||(43539530-43539570)
[»] chr6 (41 HSPs)
chr6 (66-237)||(26385278-26385451)
chr6 (61-237)||(24732143-24732320)
chr6 (64-237)||(18500313-18500487)
chr6 (69-237)||(33714486-33714660)
chr6 (66-205)||(9481182-9481321)
chr6 (62-202)||(32017746-32017885)
chr6 (144-237)||(2299389-2299483)
chr6 (63-205)||(30617964-30618101)
chr6 (133-237)||(30618166-30618272)
chr6 (67-187)||(19284130-19284250)
chr6 (59-205)||(9854126-9854270)
chr6 (69-187)||(26385531-26385649)
chr6 (64-237)||(30458898-30459074)
chr6 (132-234)||(9481390-9481494)
chr6 (65-187)||(24731934-24732059)
chr6 (133-237)||(32017605-32017709)
chr6 (71-176)||(9154884-9154990)
chr6 (133-237)||(14680949-14681055)
chr6 (141-237)||(33637733-33637831)
chr6 (70-227)||(10321737-10321893)
chr6 (132-205)||(33637625-33637698)
chr6 (143-205)||(10321970-10322032)
chr6 (136-205)||(2299548-2299617)
chr6 (89-177)||(3230129-3230217)
chr6 (133-188)||(17142744-17142799)
chr6 (144-185)||(26385433-26385474)
chr6 (65-118)||(18500655-18500708)
chr6 (144-185)||(24732120-24732161)
chr6 (148-185)||(33714642-33714679)
chr6 (144-180)||(17142798-17142834)
chr6 (145-185)||(32017691-32017731)
chr6 (63-122)||(2299337-2299396)
chr6 (149-204)||(30459141-30459196)
chr6 (144-185)||(33637709-33637751)
chr6 (65-122)||(2299635-2299692)
chr6 (144-185)||(3230018-3230059)
chr6 (150-187)||(18500604-18500641)
chr6 (148-185)||(30618147-30618184)
chr6 (133-185)||(14681141-14681193)
chr6 (134-178)||(21069583-21069627)
chr6 (134-178)||(21070802-21070846)
[»] chr8 (53 HSPs)
chr8 (62-237)||(7689728-7689905)
chr8 (63-237)||(10108575-10108751)
chr8 (63-237)||(21147933-21148110)
chr8 (62-205)||(10108366-10108509)
chr8 (61-236)||(14820500-14820677)
chr8 (66-237)||(43851665-43851837)
chr8 (65-237)||(17622889-17623060)
chr8 (77-237)||(42112996-42113157)
chr8 (135-234)||(26136893-26136994)
chr8 (65-237)||(42605958-42606132)
chr8 (77-237)||(30789519-30789680)
chr8 (64-237)||(5555074-5555249)
chr8 (64-205)||(30789746-30789887)
chr8 (65-205)||(5554868-5555008)
chr8 (132-237)||(14767573-14767680)
chr8 (132-237)||(22494589-22494696)
chr8 (66-205)||(14820295-14820433)
chr8 (65-204)||(10171383-10171522)
chr8 (65-237)||(2583525-2583700)
chr8 (62-205)||(17623126-17623268)
chr8 (66-205)||(2583320-2583459)
chr8 (132-237)||(26532849-26532956)
chr8 (64-205)||(21148175-21148316)
chr8 (65-187)||(7689523-7689644)
chr8 (64-205)||(26136683-26136824)
chr8 (84-205)||(21144744-21144865)
chr8 (70-202)||(42605759-42605889)
chr8 (66-181)||(18044092-18044205)
chr8 (64-187)||(42113241-42113361)
chr8 (64-177)||(43481581-43481695)
chr8 (135-205)||(14767746-14767816)
chr8 (144-185)||(17623042-17623083)
chr8 (134-182)||(38726755-38726803)
chr8 (135-205)||(22494454-22494523)
chr8 (158-237)||(43481406-43481487)
chr8 (144-185)||(7689705-7689746)
chr8 (144-185)||(10108552-10108593)
chr8 (144-185)||(22494566-22494607)
chr8 (148-185)||(42605939-42605976)
chr8 (64-182)||(40486627-40486744)
chr8 (134-185)||(44162731-44162782)
chr8 (135-181)||(35367480-35367525)
chr8 (140-198)||(43851910-43851968)
chr8 (144-185)||(2583502-2583543)
chr8 (144-185)||(14767662-14767703)
chr8 (63-120)||(20877069-20877126)
chr8 (65-122)||(35367409-35367466)
chr8 (133-178)||(39889628-39889673)
chr8 (65-122)||(40487736-40487793)
chr8 (144-185)||(43851819-43851860)
chr8 (138-182)||(20875768-20875812)
chr8 (147-187)||(22848399-22848439)
chr8 (133-181)||(28977686-28977734)
[»] chr7 (61 HSPs)
chr7 (65-237)||(23704866-23705039)
chr7 (65-237)||(20458691-20458864)
chr7 (66-237)||(20419536-20419709)
chr7 (65-237)||(12006540-12006713)
chr7 (66-233)||(38879723-38879893)
chr7 (63-237)||(10409579-10409754)
chr7 (65-205)||(12006779-12006919)
chr7 (64-237)||(25772362-25772536)
chr7 (63-205)||(28218175-28218318)
chr7 (132-237)||(44816901-44817008)
chr7 (64-205)||(41600197-41600338)
chr7 (65-193)||(28218414-28218542)
chr7 (66-237)||(20963494-20963668)
chr7 (66-237)||(41599958-41600131)
chr7 (65-205)||(23383739-23383879)
chr7 (65-205)||(48672518-48672658)
chr7 (66-237)||(23383499-23383673)
chr7 (67-234)||(48648263-48648431)
chr7 (65-237)||(48672276-48672452)
chr7 (77-205)||(1250445-1250573)
chr7 (66-205)||(16995200-16995338)
chr7 (67-237)||(31851242-31851412)
chr7 (66-187)||(23704662-23704782)
chr7 (132-205)||(24195035-24195108)
chr7 (65-205)||(25772570-25772710)
chr7 (66-187)||(20419793-20419915)
chr7 (64-236)||(7657967-7658142)
chr7 (65-181)||(20458954-20459069)
chr7 (66-205)||(6465855-6465993)
chr7 (133-205)||(38879963-38880035)
chr7 (65-178)||(20963760-20963872)
chr7 (62-237)||(33162740-33162918)
chr7 (68-205)||(48648468-48648603)
chr7 (137-205)||(7658208-7658276)
chr7 (66-118)||(24195198-24195250)
chr7 (135-202)||(31851481-31851548)
chr7 (132-205)||(10409440-10409513)
chr7 (144-185)||(23704843-23704884)
chr7 (132-180)||(24194929-24194978)
chr7 (133-205)||(1250273-1250345)
chr7 (144-187)||(24194973-24195016)
chr7 (93-173)||(7842467-7842546)
chr7 (144-185)||(20419691-20419732)
chr7 (144-185)||(20458846-20458887)
chr7 (144-185)||(20963650-20963691)
chr7 (144-185)||(25772518-25772559)
chr7 (144-185)||(41600113-41600154)
chr7 (144-185)||(44816990-44817031)
chr7 (134-182)||(14800918-14800966)
chr7 (134-182)||(15247910-15247958)
chr7 (145-188)||(6466037-6466080)
chr7 (135-182)||(14630403-14630450)
chr7 (144-183)||(28218320-28218359)
chr7 (66-117)||(38880048-38880099)
chr7 (137-187)||(44817092-44817142)
chr7 (144-185)||(10409556-10409597)
chr7 (148-185)||(12006695-12006732)
chr7 (133-182)||(33131700-33131749)
chr7 (144-181)||(48648420-48648457)
chr7 (144-185)||(48672434-48672475)
chr7 (145-185)||(31851394-31851434)
[»] chr4 (74 HSPs)
chr4 (71-237)||(37012712-37012880)
chr4 (64-237)||(9619184-9619359)
chr4 (65-237)||(38573968-38574141)
chr4 (65-237)||(9396904-9397077)
chr4 (66-237)||(26252442-26252615)
chr4 (67-237)||(9516611-9516783)
chr4 (62-237)||(31944155-31944332)
chr4 (66-237)||(31090060-31090234)
chr4 (67-237)||(34063983-34064155)
chr4 (63-237)||(35376333-35376508)
chr4 (136-237)||(7819219-7819322)
chr4 (65-237)||(46046429-46046597)
chr4 (67-237)||(15640920-15641093)
chr4 (68-205)||(9618982-9619119)
chr4 (64-205)||(46046663-46046803)
chr4 (69-193)||(38574219-38574343)
chr4 (68-237)||(48259956-48260126)
chr4 (69-205)||(3018014-3018151)
chr4 (69-205)||(9396702-9396838)
chr4 (67-203)||(35376164-35376299)
chr4 (66-226)||(3273836-3273996)
chr4 (69-237)||(13131943-13132114)
chr4 (64-205)||(37012946-37013086)
chr4 (64-187)||(31090318-31090441)
chr4 (138-237)||(4356086-4356187)
chr4 (66-187)||(9516867-9516988)
chr4 (132-237)||(48579932-48580039)
chr4 (77-237)||(3018217-3018377)
chr4 (137-237)||(18667494-18667596)
chr4 (65-193)||(31943949-31944077)
chr4 (77-202)||(15640727-15640851)
chr4 (132-205)||(34064221-34064294)
chr4 (65-187)||(3273620-3273743)
chr4 (64-194)||(12904745-12904874)
chr4 (132-236)||(18713166-18713272)
chr4 (63-180)||(48259820-48259938)
chr4 (135-205)||(26252337-26252407)
chr4 (132-193)||(7819080-7819141)
chr4 (65-205)||(13132180-13132318)
chr4 (71-202)||(48580108-48580239)
chr4 (134-205)||(4355949-4356020)
chr4 (132-205)||(18713026-18713099)
chr4 (64-154)||(12904874-12904964)
chr4 (65-122)||(31218303-31218360)
chr4 (63-121)||(41946962-41947020)
chr4 (84-181)||(43312227-43312324)
chr4 (144-185)||(9516765-9516806)
chr4 (133-205)||(36888919-36888991)
chr4 (64-182)||(36887678-36887796)
chr4 (133-179)||(31083362-31083408)
chr4 (144-185)||(31944132-31944173)
chr4 (144-185)||(34064137-34064178)
chr4 (135-180)||(41947120-41947165)
chr4 (144-185)||(46046579-46046620)
chr4 (145-185)||(9396882-9396922)
chr4 (134-205)||(12520707-12520778)
chr4 (63-106)||(18667628-18667671)
chr4 (135-206)||(20068518-20068589)
chr4 (134-205)||(20069539-20069610)
chr4 (134-205)||(31082252-31082323)
chr4 (144-185)||(26252418-26252460)
chr4 (144-185)||(3018194-3018235)
chr4 (144-185)||(4356063-4356104)
chr4 (144-185)||(7819196-7819237)
chr4 (144-181)||(9619161-9619198)
chr4 (144-185)||(18667471-18667512)
chr4 (144-185)||(31090216-31090257)
chr4 (144-185)||(37012862-37012903)
chr4 (148-185)||(38574123-38574160)
chr4 (89-122)||(43313533-43313566)
chr4 (144-185)||(48259933-48259974)
chr4 (149-185)||(15640902-15640938)
chr4 (133-185)||(36699483-36699535)
chr4 (66-118)||(41947180-41947232)
[»] chr5 (54 HSPs)
chr5 (60-237)||(24837163-24837342)
chr5 (66-237)||(31799640-31799813)
chr5 (64-234)||(6817121-6817292)
chr5 (65-237)||(17762487-17762661)
chr5 (66-226)||(23979117-23979279)
chr5 (71-237)||(7125923-7126090)
chr5 (65-237)||(14144106-14144280)
chr5 (66-237)||(18336661-18336833)
chr5 (59-235)||(30512281-30512459)
chr5 (59-235)||(30552621-30552799)
chr5 (67-237)||(993751-993920)
chr5 (63-205)||(14143899-14144040)
chr5 (65-237)||(4918988-4919163)
chr5 (60-205)||(17762277-17762421)
chr5 (132-237)||(20709278-20709385)
chr5 (132-237)||(24074507-24074614)
chr5 (65-202)||(14411696-14411833)
chr5 (65-205)||(7126156-7126296)
chr5 (65-205)||(24074302-24074442)
chr5 (133-237)||(14411871-14411977)
chr5 (63-237)||(27158988-27159161)
chr5 (77-205)||(29444817-29444945)
chr5 (135-234)||(41001422-41001523)
chr5 (66-205)||(24837408-24837547)
chr5 (66-202)||(18336467-18336604)
chr5 (132-234)||(24650766-24650870)
chr5 (67-187)||(41001610-41001729)
chr5 (79-193)||(22571090-22571204)
chr5 (65-203)||(24650940-24651078)
chr5 (64-234)||(29445014-29445185)
chr5 (65-202)||(31799882-31800018)
chr5 (71-205)||(27159196-27159327)
chr5 (64-202)||(20709454-20709591)
chr5 (132-209)||(993981-994058)
chr5 (133-202)||(6817363-6817432)
chr5 (67-187)||(4919247-4919366)
chr5 (133-205)||(20959330-20959402)
chr5 (134-206)||(41424584-41424656)
chr5 (144-185)||(18336638-18336679)
chr5 (134-182)||(32233967-32234015)
chr5 (144-185)||(7126072-7126113)
chr5 (144-185)||(17762464-17762505)
chr5 (144-185)||(24650855-24650896)
chr5 (144-185)||(24837324-24837365)
chr5 (134-182)||(28070532-28070580)
chr5 (135-182)||(28071759-28071806)
chr5 (144-185)||(14411847-14411889)
chr5 (149-187)||(20947059-20947097)
chr5 (148-185)||(4919145-4919182)
chr5 (144-185)||(14144083-14144124)
chr5 (144-185)||(31799795-31799836)
chr5 (144-185)||(41001508-41001549)
chr5 (145-185)||(20709367-20709407)
chr5 (139-187)||(22571230-22571278)
[»] chr2 (55 HSPs)
chr2 (65-237)||(26236300-26236473)
chr2 (60-234)||(17463299-17463475)
chr2 (65-237)||(19251675-19251848)
chr2 (66-237)||(23806157-23806330)
chr2 (66-237)||(15106272-15106443)
chr2 (66-237)||(22263192-22263364)
chr2 (65-202)||(26236126-26236263)
chr2 (77-234)||(30390470-30390629)
chr2 (77-237)||(26560567-26560727)
chr2 (66-237)||(17850587-17850759)
chr2 (63-205)||(17850825-17850967)
chr2 (76-205)||(26135827-26135956)
chr2 (77-237)||(13254641-13254803)
chr2 (132-237)||(20498950-20499057)
chr2 (63-202)||(19251468-19251606)
chr2 (144-237)||(39878307-39878402)
chr2 (64-205)||(22263430-22263573)
chr2 (66-237)||(26136022-26136195)
chr2 (67-205)||(26560793-26560932)
chr2 (66-205)||(42670958-42671097)
chr2 (66-234)||(42670717-42670889)
chr2 (66-175)||(23854688-23854797)
chr2 (65-193)||(13254496-13254624)
chr2 (66-207)||(34548574-34548714)
chr2 (66-193)||(15106067-15106194)
chr2 (142-237)||(13284484-13284581)
chr2 (65-205)||(20498746-20498884)
chr2 (65-205)||(39878102-39878241)
chr2 (66-205)||(17463092-17463230)
chr2 (133-205)||(23854905-23854977)
chr2 (136-203)||(23806022-23806089)
chr2 (64-237)||(33290254-33290427)
chr2 (136-204)||(13284648-13284716)
chr2 (65-172)||(23046706-23046813)
chr2 (66-172)||(44098894-44099000)
chr2 (79-205)||(33290062-33290188)
chr2 (134-182)||(21482142-21482190)
chr2 (144-187)||(33290231-33290274)
chr2 (64-205)||(12418962-12419102)
chr2 (64-205)||(12431022-12431162)
chr2 (144-185)||(15106249-15106290)
chr2 (144-185)||(22263346-22263387)
chr2 (144-185)||(23806134-23806175)
chr2 (144-185)||(26236277-26236318)
chr2 (145-185)||(23854821-23854861)
chr2 (66-106)||(23855032-23855072)
chr2 (68-108)||(44999354-44999394)
chr2 (71-118)||(44999435-44999481)
chr2 (143-185)||(30390614-30390656)
chr2 (144-185)||(39878284-39878325)
chr2 (144-185)||(42670874-42670915)
chr2 (145-185)||(19251653-19251693)
chr2 (209-237)||(23854811-23854839)
chr2 (145-185)||(26560709-26560749)
chr2 (134-206)||(36359111-36359183)
[»] scaffold0361 (3 HSPs)
scaffold0361 (65-237)||(4768-4941)
scaffold0361 (64-181)||(4560-4678)
scaffold0361 (144-185)||(4745-4786)
[»] scaffold0449 (2 HSPs)
scaffold0449 (67-237)||(7227-7403)
scaffold0449 (63-177)||(7466-7581)
[»] scaffold0185 (3 HSPs)
scaffold0185 (65-237)||(3868-4042)
scaffold0185 (64-205)||(4108-4249)
scaffold0185 (148-185)||(4024-4061)
[»] scaffold0477 (1 HSPs)
scaffold0477 (61-237)||(4953-5129)
[»] scaffold0117 (1 HSPs)
scaffold0117 (71-205)||(12221-12355)
[»] scaffold0809 (3 HSPs)
scaffold0809 (64-204)||(1409-1548)
scaffold0809 (65-237)||(1615-1785)
scaffold0809 (144-185)||(1592-1633)
[»] scaffold0141 (2 HSPs)
scaffold0141 (66-226)||(8538-8700)
scaffold0141 (65-193)||(8324-8450)
[»] scaffold0881 (2 HSPs)
scaffold0881 (132-236)||(286-392)
scaffold0881 (144-185)||(375-416)
[»] scaffold0352 (2 HSPs)
scaffold0352 (60-181)||(5941-6063)
scaffold0352 (65-180)||(4666-4781)
[»] scaffold0176 (1 HSPs)
scaffold0176 (65-205)||(15871-16007)
[»] scaffold0220 (1 HSPs)
scaffold0220 (134-185)||(27648-27699)
[»] scaffold0157 (1 HSPs)
scaffold0157 (134-205)||(139-210)


Alignment Details
Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 9266972 - 9267148
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| |||    
T  9266972 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatatt 9267071  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||||| ||||||||||||||||||||  || || | ||||||||||||||||||||||||    
T  9267072 cttccacttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtg 9267148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 35995677 - 35995851
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||| | |||||||||||||||||| | |||||||||||||           |||||||||||||||||||||||||||||||    
T  35995677 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattct 35995776  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||||||  || ||| |||||||||||||||||||||||||    
T  35995777 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 35995851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 17465366 - 17465541
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtc-cctgtaatttcagattc 163  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||||||||| |||||         ||||||||||| ||| |||||||||||||||||    
T  17465366 agggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgtaaaaaaaatgatttagatttcgtctcctgtaatttcagattc 17465465  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||| ||||| || |||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||    
T  17465466 ttccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 17465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 19112763 - 19112938
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattc 163  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||          ||||||||||||||||||| ||||||| ||||    
T  19112763 agggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattc 19112862  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||| ||| || |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  19112863 ttccacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtg 19112938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 16722370 - 16722196
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||    |||||||||||||         ||||||||||||||||||||||||||| |||||    
T  16722370 agggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattct 16722271  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||| ||| || || ||||||||||||||  || ||| |||||||||||||||||||||||||    
T  16722270 tccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 16722196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 52553065 - 52552927
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||         ||||||||||||||| ||||||||||| |||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||| ||||| ||||| |||||||||||    
T  52552965 cacttttggtccctcctttcatcacgtcagcagaatctg 52552927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 14262033 - 14262209
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||| ||||  ||||||||||| |||||||||||||||||| | ||||||||| |||          ||||||||||||||||||||||||||||||    
T  14262033 aaagggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagatt 14262132  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||| ||| || ||| | |||||||||||  || |||||||||||||||||||||||||||||    
T  14262133 cttccacttttggtcccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 14262209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 4204774 - 4204881
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  || |||||||||||||||||||||    
T  4204774 gatttagattatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 4204873  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  4204874 caaaagtg 4204881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 21633275 - 21633101
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| | || |||||| |||||||||||||||||    ||||||||||| |         |||||||||||||||||||||||||||||||||    
T  21633275 agggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattct 21633176  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||| ||||||||  || ||||||| |||||||||||||||||||||    
T  21633175 tccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtg 21633101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 20853692 - 20853869
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagat 161  Q
    ||||||||||||| ||||||||||| |||||||||||||||||  | |||||  ||||||          |||||||||||||||||| |||||||| ||    
T  20853692 aaagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatat 20853791  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||||| || |||||||| ||||||||  || |||||||||||||||||||||||||||||    
T  20853792 tcttccacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 20853869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 30500039 - 30500214
Alignment:
Q  62 taaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagat 161  Q
    |||||||| ||||| ||||||| ||| |||||||||||||||||  | |||||||||||||          |||||||||||||||||||||||||| ||    
T  30500039 taaagggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatat 30500136  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||| ||| || ||||| |||||||||||  || |||||||||||||||||||||||||||||    
T  30500137 tcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 30500214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 33372783 - 33372611
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| |||||||||||  ||||||||||||||||  ||||||||| |||||         |||||||||||||||||||||||||||||||||    
T  33372783 agggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattct 33372684  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctgtata-tggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||| |||| |||| || ||||| ||||||||||| ||| || |||||||||||||||| ||||||||    
T  33372683 tccacttttgatccc-cattccaccacgtcagcagaatctgcatactgacacgtaaaatgagggatcaaaagtg 33372611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 43572702 - 43572596
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggacc 230  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||| ||| ||||||||||||||||||    
T  43572702 atttagattctgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggacc 43572603  T
Q  231 aaaagtg 237  Q
    |||||||    
T  43572602 aaaagtg 43572596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 14171584 - 14171756
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    |||||||||||||  |||||||||| |||||||||||||||||| ||||||| |  ||||         ||||||||||||||||||||||||||| |||    
T  14171584 aaagggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaatt 14171682  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    |||||||||||| ||||||||| || ||||| |||||||||||  || |||||||||||||||||||| |||||    
T  14171683 cttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 14171756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 14262416 - 14262275
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| |||     
T  14262416 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattg 14262317  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||| ||||||| ||||| ||||| |||||||||||    
T  14262316 ttccacttttagtccctcctttcatcacgtcagcagaatctg 14262275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 45970296 - 45970120
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagatt 162  Q
    |||||||||||| ||||||||||| ||||||||||| |||||  | |||||||||||||          |||||| ||||||||||||||||||||||||    
T  45970296 aagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagatt 45970197  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||| || |||| || ||||||||||||||| |  || ||| |||||||||||||||||||||||||    
T  45970196 cttccacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagtg 45970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 14171965 - 14171825
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         |||||||||||||||||||||||||| ||||||    
T  14171965 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattct 14171866  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| || ||||| ||||| |||| ||||||    
T  14171865 tccacttttggtccttcctttcatcacgtcagcaaaatctg 14171825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 33372405 - 33372545
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||  ||||||||||| |||||||||||||||||||| ||||||| |||||         ||||||||||||||||||||||||||||||| |    
T  33372405 agggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattat 33372504  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||| ||||| ||||| |||| ||||||    
T  33372505 tccacttttggtccctcctttcatcacgtcagcaaaatctg 33372545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 14162248 - 14162079
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||| ||||| |||||| |||| |||||||||||||||||| | |||||||||||||         |||||||||||||||| |||||||||||||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaga-gatttagattttgtccttgtaatttcagattctt 14162150  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    ||||||||||||||| ||| || ||||| |||| ||| ||  || ||||||||||||||||||||||||||    
T  14162149 ccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaa 14162079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 38283861 - 38283755
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggacc 230  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||  || ||||||||||||||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggacc 38283762  T
Q  231 aaaagtg 237  Q
    |||||||    
T  38283761 aaaagtg 38283755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 45003874 - 45003701
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||| ||| |||||||| |||||||||||||||||  | ||||||| |||||         ||||||||||| |||||| |||||||| |||||    
T  45003874 agggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaa-gatttagatttagtccctataatttcatattct 45003776  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||||||  || |||||| ||||||||||||| ||||||||    
T  45003775 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtg 45003701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 15328772 - 15328665
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||| |||||||||||  |||||| ||||||||||||| |||    
T  15328772 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagac 15328673  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  15328672 caaaagtg 15328665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 43572388 - 43572510
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||||||||||||| | |||||||||||||||||  | |||||||||||||          ||||||||||||||||||||||||||||||||    
T  43572388 agggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattct 43572487  T
Q  165 tccacttttggtccctcatttca 187  Q
    ||||||||||||||||| |||||    
T  43572488 tccacttttggtccctcctttca 43572510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 45969912 - 45970054
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||| | |||||||||||||         |||||||||||||||||||||||||||||||    
T  45969912 aaagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 45970011  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||| ||||||||||| ||| ||||| || || | |||||||||    
T  45970012 ctttcacttttggtctctcctttcatcaagtcaacagaatctg 45970054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 9267353 - 9267214
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||           ||||||||||||||||||||| |||||||||    
T  9267353 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaatt-ttttagattttgtccctgtaatatcagattct 9267255  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    || |||||||||||||| ||||| || || | |||||||||    
T  9267254 tctacttttggtccctcctttcatcaagtcaacagaatctg 9267214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 49986907 - 49986733
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnnga-tttagattttgtccctgtaatttcagattc 163  Q
    ||||||||||| |||||||||||  ||||||||||||||||  | ||||||| |||||          | |||||||||||||  |||||||||| ||||    
T  49986907 agggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgtct-tgtaatttcatattc 49986809  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||| || |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  49986808 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtg 49986733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 5800605 - 5800744
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||| ||||||  | |||||||||||||         |||||||||| |||||||||||||||| ||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 5800704  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||| |||||||||||| ||||| ||||| |||||||||||    
T  5800705 ccatttttggtccctcctttcatcacgtcagcagaatctg 5800744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 52552758 - 52552865
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || || || |||||||||||  || ||| |||||||||||||||||    
T  52552758 gatttagattttgtccctgtaatttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggac 52552857  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  52552858 caaaagtg 52552865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 16721988 - 16722130
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| | |||||||| ||||          ||||||||||||||| ||||||||||||||    
T  16721988 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagatt 16722087  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||  ||||| || || | |||||||||    
T  16722088 cttccacttttggtcccttctttcatcaagtcaacagaatctg 16722130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 35996056 - 35995917
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||          | ||||| |||||| | |||||||||||||    
T  35996056 aaagggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaa---aattagaatttgtctcagtaatttcagatt 35995960  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||  ||||| |||||  ||||||||||    
T  35995959 cttccacttttggtcccttctttcatcacgtccgcagaatctg 35995917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 30500420 - 30500281
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||   |||||||||||||          |||||||||||||||||||||||||| |||     
T  30500420 aagggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaa-atttagattttgtccctgtaatttcatattg 30500322  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    |||||||||||||||||| ||||| ||||| |||| |||||    
T  30500321 ttccacttttggtccctcctttcatcacgtcagcaaaatct 30500281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 5800982 - 5800813
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||| ||||| ||||||||||| |||||||||||||||||| | ||| |||||||||         |||||||||||||||| |||||||||| ||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 5800884  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    ||||||||||||||| ||| || ||| | |||| ||| ||  || |||||| |||||||||||||||||||    
T  5800883 ccacttttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaaaa 5800813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 11003730 - 11003853
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| |||||| ||||||||||||||| ||||||| | |||||||||||||         || ||||||||||||| |||||||||||||||    
T  11003730 aagggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattc 11003829  T
Q  164 ttccacttttggtccctcatttca 187  Q
    ||||||||||||||| || |||||    
T  11003830 ttccacttttggtccatcctttca 11003853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 14161871 - 14162010
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  ||||||||||| ||||||||||||||||||   ||||||| ||| |         |||||||||| |||||||||||||||| ||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattctt 14161970  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||||| ||||| |||||||||||    
T  14161971 ccacttttggtccctcctttcatcacgtcagcagaatctg 14162010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 19113143 - 19113004
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| | |||||||| ||||||| | |||||||||||||         |||||||||||| |||||||||||||||||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    | |||||||||||||| ||||| || || | |||||||||    
T  19113043 ctacttttggtccctcctttcatcaagtcaacagaatctg 19113004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 45003496 - 45003639
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  |||||||||||  ||||||||||| ||||| | ||| ||||||| |         ||||||||||||||||||||||||||||||||||    
T  45003496 gggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattctt 45003595  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctgtata 209  Q
    |||||||| ||||||| ||||| ||||| | |||||||||||||    
T  45003596 ccactttttgtccctcctttcatcacgtcaacagaatctgtata 45003639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 20854074 - 20853953
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||  ||||||||||| |||||||||||||||||  | ||||||||| |||         |||||||||||||||||||||||||||||||||    
T  20854074 agggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20853976  T
Q  165 tccacttttggtccctcatttca 187  Q
    ||||||||||||||||| |||||    
T  20853975 tccacttttggtccctcctttca 20853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 205
Target Start/End: Original strand, 21632896 - 21633035
Alignment:
Q  61 ataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcaga 160  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||     ||||||||||||         ||| ||||| |||||||||||||||||||    
T  21632896 ataaagggtaaatacctcttttcgtccctgtaatattagcgaatt-----tttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcaga 21632990  T
Q  161 ttcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||| ||||||||||||||| ||||| || || | |||||||||    
T  21632991 ttctttcacttttggtccctcctttcatcaagtcaacagaatctg 21633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 49986526 - 49986649
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattc 163  Q
    ||||||||||| ||||||||||| ||||||||||| |||||| | |||||||| ||||          ||||||||||||||||||||||||||||||||    
T  49986526 agggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 49986625  T
Q  164 ttccacttttggtccctcatttca 187  Q
    ||| |||||||||| ||| |||||    
T  49986626 ttctacttttggtctctcctttca 49986649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 19720333 - 19720433
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 19720432  T
Q  166 c 166  Q
    |    
T  19720433 c 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 17465747 - 17465618
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| |||||||||||||||||||||||||||||    ||||| || ||||          ||||| ||||||||||||||| || ||||||    
T  17465747 aagggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgtaaaataaaatatttaaattttgtccctgtaactttagattc 17465648  T
Q  164 ttccacttttggtccctcatttcagcacgt 193  Q
    || ||||||||||||||| ||||| |||||    
T  17465647 tttcacttttggtccctcctttcatcacgt 17465618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 47575581 - 47575511
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||| ||||||||||||||| ||| |||||||||| ||| ||||| ||||| |||||||||||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctg 47575511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 38283561 - 38283688
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||| ||| |||||||||| ||||||| | ||||||||| |||          ||||||||||||| ||| |||||||| ||| ||||||||||| |    
T  38283561 tcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttccacttttgat 38283660  T
Q  177 ccctcatttcagcacgtaagcagaatct 204  Q
    ||||| ||||| ||||| ||||||||||    
T  38283661 ccctcctttcatcacgtcagcagaatct 38283688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 45058803 - 45058731
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| || || |||||| ||||||    
T  45058803 gatttagattttgtctctgtaatttcagattcttccatttttgatcccttattccaccatgtaagccgaatct 45058731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 47575339 - 47575445
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    ||||||||||||||   |||||||| | |||||| |||||||||||||| ||| || ||||  |||||||||||  || ||||||||||||||||||||     
T  47575339 gatttagattttgtttatgtaattttatattctttcacttttggtccct-attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggat 47575437  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  47575438 caaaagtg 47575445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 15328529 - 15328599
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||||||| ||||||||| |||  ||||||| ||||| ||||| | |||||||||    
T  15328529 ttagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctg 15328599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 182
Target Start/End: Complemental strand, 36991038 - 36990922
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||| |||||  ||||| |||| |||||||||||||||||  | |||||||||||||         | |||||||| |||||||||||||| |||||||    
T  36991038 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattct 36990940  T
Q  165 tccacttttggtccctca 182  Q
    ||||||||| ||||||||    
T  36990939 tccacttttagtccctca 36990922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 182
Target Start/End: Complemental strand, 37016478 - 37016362
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||| |||||  ||||| |||| |||||||||||||||||  | |||||||||||||         | |||||||| |||||||||||||| |||||||    
T  37016478 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattct 37016380  T
Q  165 tccacttttggtccctca 182  Q
    ||||||||| ||||||||    
T  37016379 tccacttttagtccctca 37016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 16722173 - 16722214
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  16722173 gtccctgtaatttcagattcctccacttttggtccctcattt 16722214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 17649322 - 17649277
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtc 177  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  17649322 gatttagattttgtccctgtaatttcagattattccacatttggtc 17649277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 27946244 - 27946187
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||||||||| |||||||||||  ||||||||||||||||| | |||||||||||||    
T  27946244 agggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 35741967 - 35741824
Alignment:
Q  61 ataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcaga 160  Q
    ||||||||| |||||  ||||| |||| ||||||||||||||||||   |||||||||||||         | |||||||| ||||||||| |||| |||    
T  35741967 ataaagggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaag-tttagattatgtccctgtcattttaga 35741869  T
Q  161 ttcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||| ||||| |||||||| || | ||| | |||||||||||    
T  35741868 ttcttccgcttttagtccctcaattgaacacatcagcagaatctg 35741824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 49986710 - 49986751
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  49986710 gtccctgtaatttcagattcctccacttttggtccctcattt 49986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 32998444 - 32998376
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||| ||| | || || ||||||||    
T  32998444 tttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccatgtcagcagaat 32998376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 35740883 - 35740931
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  35740883 tttagattttgtccctgtaattttaaattcttccacttttagtccctca 35740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 1068954 - 1068912
Alignment:
Q  139 attttgtccctgtaatttcagattcttccacttttggtccctc 181  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  1068954 attttgtccctgtcatttcagattcttccacttttagtccctc 1068912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 9267171 - 9267130
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  9267171 gtccttgtaatttcagattcctccacttttggtccctcattt 9267130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 19112961 - 19112920
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  19112961 gtccctgtaatttcagatttctccacttttggtccctcattt 19112920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 21633078 - 21633119
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  21633078 gtccttgtaatttcagattcctccacttttggtccctcattt 21633119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 35995878 - 35995833
Alignment:
Q  140 ttttgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  35995878 ttttgtccctgtaatttcatgttcctccacttttggtccctcattt 35995833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 38283728 - 38283773
Alignment:
Q  140 ttttgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||    
T  38283728 ttttgtccgtgtaatttcaaattcctccacttttggtccctcattt 38283773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 45970097 - 45970138
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  45970097 gtccctgtaatttcagatttctccacttttggtccctcattt 45970138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 47575472 - 47575427
Alignment:
Q  140 ttttgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||    
T  47575472 ttttgtccctgtaatttcaaattcctccacttttgatccctcattt 47575427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 14262231 - 14262191
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  14262231 tccctgtaatttcaaattcctccacttttggtccctcattt 14262191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||| ||||||||||| |||||||||||||||||  | |||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 1067719 - 1067761
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgatttt 113  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||    
T  1067719 aatacctcttttggtccttgtaatatcagcgaattctgatttt 1067761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 17465561 - 17465523
Alignment:
Q  147 cctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  17465561 cctgtaatttcatattcctccacttttggtccctcattt 17465523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 5800787 - 5800828
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||| ||||||||||||||||    
T  5800787 gtccctgtaatttcaaattcctccatttttggtccctcattt 5800828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 14162053 - 14162094
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||| ||||||||||||||||    
T  14162053 gtccctgtaatttcaaattcctccatttttggtccctcattt 14162094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 14171782 - 14171741
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||| ||||| ||||||||||    
T  14171782 gtccctgtaatttcagattcctccatttttgatccctcattt 14171741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 15328642 - 15328683
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| ||||||||||||| |||||||    
T  15328642 gtccctgtaatttcaaattcctccacttttggtctctcattt 15328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 20853888 - 20853851
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  20853888 ctgtaattttagattcctccacttttggtccctcattt 20853851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 43572573 - 43572614
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  43572573 gtccctgtaatttcaaattactccacttttggtccctcattt 43572614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 52552888 - 52552847
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  52552888 gtccctgtaatttcaaattccttcacttttggtccctcattt 52552847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 4204999 - 4204947
Alignment:
Q  153 atttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||||| |||||| ||| | ||||| || ||||||||    
T  4204999 atttcagattcttccacttttgatccctctttttatcacgtcagtagaatctg 4204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 45003679 - 45003719
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||| ||||||||||    
T  45003679 tccctgtaatttcatattcctccacttttgatccctcattt 45003719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 39711452 - 39711277
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||         ||||||||||||||||| ||||||||| ||||    
T  39711452 aagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattc 39711353  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||| || |||||||||||||| ||  || |||||||||||||||||||||||||||||    
T  39711352 ttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtg 39711277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 39826048 - 39826223
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| | |||||||||||||||  |||||||||||||||         ||||||||||||||||||||||||||||||||    
T  39826048 aagggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 39826147  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||| ||||||||| || ||||| |||||||||||  || |||||||||||||||||||| ||||||||    
T  39826148 ttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtg 39826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 34749136 - 34749310
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |         ||||||||||||||||| ||||||||| ||||    
T  34749136 aagggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaa-gatttagattttgtccccgtaatttcatattc 34749234  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||| || |||||||||||||| ||  || |||||| ||||||||||||||||||||||    
T  34749235 ttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagtg 34749310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 65 - 236
Target Start/End: Original strand, 33628689 - 33628862
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||         ||||||||||||||||| |||||||||||||||    
T  33628689 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattct 33628788  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagt 236  Q
    | |||||||||||||||||| || ||| |||||||||| ||  || ||||||||||||||||||||||||||||    
T  33628789 ttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaagt 33628862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 4906960 - 4907135
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||  |||||||||||||         ||||||||||||||||||||||||||| ||||    
T  4906960 aagggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattc 4907059  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||| || ||||| ||| |||||||  || |||||| |||||||||||||| |||||||    
T  4907060 ttccacttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtg 4907135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 52058011 - 52058184
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||||||||||||||||||| ||||||| | |||||||  ||||         |||||||| | |||||||||||||||||||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattctt 52058110  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||||| ||| | |||||||||||  || ||| |||||||||||||||||||||||||    
T  52058111 ccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 52058184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 17606686 - 17606513
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| | |||||||||||||         |||||||||||||||| |||||||||||||||    
T  17606686 aagggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaa--gatttagattttgtccttgtaatttcagattc 17606589  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||| ||| || ||||| |||| ||| ||  || |||||||||||||||||||||||||||||    
T  17606588 ttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtg 17606513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 24467626 - 24467749
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||         |||||||||||||||||||||||||||||||    
T  24467626 aaagggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagatt 24467724  T
Q  163 cttccacttttggtccctcatttca 187  Q
    ||||||||||||||||||| |||||    
T  24467725 cttccacttttggtccctcctttca 24467749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 29696937 - 29696768
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| |||||||||   |||||||||||||||||| | |||||||| ||||          ||| ||||||||||| |||||||||||||||    
T  29696937 aagggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatt-agattttgtccatgtaatttcagattc 29696839  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctgtatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  29696838 ttccacttttggtccctcattccaccacgtaagcagaatctgcat---gcacgtaaaatgagggaccaaaagtg 29696768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 48072340 - 48072166
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| |||||||||| |||||||||||| |||||| | ||||||||| |||          ||||||||| |||||||||||||||| |||||    
T  48072340 agggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattct 48072241  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||  |||||||||| ||||| |||||||||||  || ||| |||||||||||||||||||||||||    
T  48072240 tccacttttgggtcctcatttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtg 48072166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 30299609 - 30299436
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| | ||||||||  |||||||||||| ||||  | ||||||| |||||         ||||||||||||||||||||||||| ||||||||    
T  30299609 gggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattctt 30299510  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||| || |||||||| ||||||||  || ||||||| |||||||||||||||||||||    
T  30299509 ccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtg 30299436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 24468002 - 24467843
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||||   | ||||||||||| |||||| | |||||||||||||         ||||||||||||||||||||||||||||||||||    
T  24468002 gggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 24467906  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagg 226  Q
    |||||||||||||||||||||| ||||| || ||||||||  || ||||||||||||||||||    
T  24467905 ccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg 24467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 17606307 - 17606451
Alignment:
Q  69 taaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn----gatttagattttgtccctgtaatttcagattct 164  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||             |||||||||||||| |||||||||||| |||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctgtata 209  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  17606407 tccacttttggtccctcatttcatcacgtcagcagaatctgtata 17606451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 52058388 - 52058259
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||| || ||||||| |||||         |||||||||| |||||||||||||||||||||    
T  52058388 aagggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattc 52058289  T
Q  164 ttccacttttggtccctcatttcagcacgt 193  Q
    |||||||||||||||||| ||||| |||||    
T  52058288 ttccacttttggtccctcctttcatcacgt 52058259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 18462283 - 18462406
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         |||||||||||||||||||||||||||||||    
T  18462283 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagatt 18462381  T
Q  163 cttccacttttggtccctcatttca 187  Q
    |||||| |||||||||||| |||||    
T  18462382 cttccatttttggtccctcctttca 18462406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 39970712 - 39970819
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||| |||| ||||||  || |||||||||||||||||||||    
T  39970712 gatttagattttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggac 39970811  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  39970812 caaaagtg 39970819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 18462669 - 18462500
Alignment:
Q  59 ttataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttca 158  Q
    |||||||||| |||||| ||||||| ||| |||||||||||| ||||| | ||||||| | |||         ||||||||||||||||| |||||||||    
T  18462669 ttataaagggcaaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttca 18462570  T
Q  159 gattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagg 226  Q
    ||||||||||||||||||| ||||||||| ||||| | |||||||||  || |||||||| |||||||||    
T  18462569 gattcttccacttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatgagg 18462500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 42510081 - 42510187
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggacc 230  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| | |||||||||||  || ||||||||| ||||||||||||    
T  42510081 atttagattttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacatcagcagaatctgcatacatggcacgtgaaatgagggacc 42510180  T
Q  231 aaaagtg 237  Q
    |||||||    
T  42510181 aaaagtg 42510187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 20996052 - 20995874
Alignment:
Q  59 ttataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttca 158  Q
    |||| |||||| ||||| |||||| |||| ||||||||||||||||| |  ||||||||| |||         ||||||||||||||| |||||||||||    
T  20996052 ttattaagggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaa-gatttagattttgtctctgtaatttca 20995954  T
Q  159 gattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
     ||||||||||||||||||||| ||| || ||||| |||||||||||  || ||||||||| |||||||||||||||||||    
T  20995953 tattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgt-aaatgagggaccaaaagtg 20995874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 39826424 - 39826312
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||  | |||||||||||||         ||||||||||||||||||||||||||||||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 39826325  T
Q  166 ccacttttggtcc 178  Q
    |||||||||||||    
T  39826324 ccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 4907340 - 4907201
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  | ||||| ||| ||||||||||||||||||   |||||||||||||         ||||||||||||||||||||||||||||||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||||| ||||| || ||||||||    
T  4907240 ccacttttggtccctcctttcatcacgtcagtagaatctg 4907201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 39711074 - 39711211
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  39711074 gggtaaatacctcttttcgtc-ttgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattctt 39711171  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||| | ||||| |||||||||||    
T  39711172 ccacttttggtccctcctttaatcacgtcagcagaatctg 39711211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 8293188 - 8293020
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagatt 162  Q
    |||||||||||| ||||||||||| | |||||||| ||||||||  |||||||||||||          ||||||||||||||||||||||||||| |||    
T  8293188 aagggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 8293089  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||||||||||||||| || || || ||| |||||||  || |||||| | ||||||||||||    
T  8293088 cttccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggac 8293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 33629071 - 33628930
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||| ||||| |||||| |||| |||||||||||||||||| | |||||||||||||          | || |||||||||||||||||||||||||    
T  33629071 aaagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagatt 33628972  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||    
T  33628971 cttccacttttggtccctcctttaatcacgtcagcagaatct 33628930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 8292804 - 8292943
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  ||||||||||| |||| ||||||||||| | | |||||||||||||         ||||||||||||||||||| ||||||| ||||||    
T  8292804 gggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattctt 8292903  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||| |||| ||||| ||||| |||||||||||    
T  8292904 ccacttttggttcctcttttcatcacgtcagcagaatctg 8292943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 34749483 - 34749344
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||| |||  |||||||||| ||||||| ||||||||||| |||         |||||||||||| |||||||||||||||||||||    
T  34749483 gggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 34749384  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||| |||| ||| | ||||| |||||||||||    
T  34749383 ccacttttggtacctcctttaatcacgtcagcagaatctg 34749344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 30299230 - 30299369
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| ||||||||||||||| |  ||||||||||| |||         ||||||||||||||||||||||||||| ||||    
T  30299230 aagggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 30299328  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    |||||||||||||| ||| ||||| || || | ||||||||    
T  30299329 ttccacttttggtctctcctttcatcaagtcaacagaatct 30299369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 203
Target Start/End: Complemental strand, 39971024 - 39970886
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||| ||||||||||| |||||||||| ||||||  | |||||||||||||          ||||||||||||||||||||||||| |||| ||    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcct 39970925  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatc 203  Q
    ||||||||||||||||  ||||| ||||| |||||||||    
T  39970924 tccacttttggtcccttctttcatcacgtcagcagaatc 39970886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 43539349 - 43539486
Alignment:
Q  68 gtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttcc 167  Q
    |||||||  ||||||| ||| ||||| |||||| ||||| ||||||||||| |||         ||||||||||||||||||||||||| | ||| ||||    
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcc 43539448  T
Q  168 acttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| ||||| ||||| |||||||||||    
T  43539449 acttttggtccctcctttcatcacgtcagcagaatctg 43539486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 202
Target Start/End: Original strand, 48071972 - 48072097
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||| | |||||||||||||||||||| ||||||| |||||         ||||||||||||||||||||||||||| ||| ||||||||||| |    
T  48071972 tcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatattattccacttttgct 48072071  T
Q  177 ccctcatttcagcacgtaagcagaat 202  Q
    ||||| ||||| ||| | ||||||||    
T  48072072 ccctcctttcatcacatcagcagaat 48072097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 13230040 - 13229936
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaa 232  Q
    |||||||||| | || ||||||||  |||||||||||||||||||||||| || |||||||||||||||||  || ||| |||| |||||||||||||||    
T  13230040 ttagattttgcctctttaatttcatcttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaa 13229941  T
Q  233 aagtg 237  Q
    |||||    
T  13229940 aagtg 13229936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 7473862 - 7473965
Alignment:
Q  136 tagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaa 233  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||| |  ||||||||  || ||||||||| |||||| ||| ||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaa 7473961  T
Q  234 agtg 237  Q
    ||||    
T  7473962 agtg 7473965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 29696564 - 29696703
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||  | |||||||| ||||         ||||||||||||||||| ||||||||| |||||    
T  29696564 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaa-gatttagattttgtccccgtaatttcatattct 29696662  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||| ||| ||| ||||| ||| |  ||||||||||    
T  29696663 tccactttttgtcactcctttcatcacatcggcagaatctg 29696703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 30252279 - 30252158
Alignment:
Q  65 agggtaaatacatcttttc--gtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||| ||||| |  |||| | |||||||||||||||||| |||||||||||||         ||||||||||||||||| ||||||||| |||    
T  30252279 agggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatatt 30252180  T
Q  163 cttccacttttggtccctcatt 184  Q
    |||||| ||||| |||||||||    
T  30252179 cttccatttttgatccctcatt 30252158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 43539653 - 43539552
Alignment:
Q  138 gattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaag 235  Q
    |||||||||| |||||||||| ||||||||| ||||||||||| ||| || ||||| ||| |||||||  || ||| |||||||||||||| ||||||||    
T  43539653 gattttgtccatgtaatttcaaattcttccagttttggtcccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaag 43539554  T
Q  236 tg 237  Q
    ||    
T  43539553 tg 43539552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 18342395 - 18342261
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| | ||||||||| |||||||||||||||||  | |||||||||||||          ||||| ||||| | | |||||||||| ||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttaaattttattcttgtaatttcatattctt 18342298  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    |||||||| |||||||||| || ||||||||||||||    
T  18342297 ccacttttagtccctcattccaccacgtaagcagaat 18342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 16294302 - 16294187
Alignment:
Q  89 tgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcag 188  Q
    |||||||||||| ||||  |||||||||||||||          ||||||||||||||| |||||||||| |||| |||||||||||||||| |||| |     
T  16294302 tgtaatattagcaaatttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaac 16294203  T
Q  189 cacgtaagcagaatct 204  Q
    || || ||||||||||    
T  16294202 catgtcagcagaatct 16294187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 17502095 - 17501969
Alignment:
Q  78 cttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggtc 177  Q
    ||||| ||||||||||||||||||||||| | ||||||||||| |         | |||||||| ||||||||||||||||||||| ||||||||| |||    
T  17502095 cttttggtccttgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccctgtaatttcagattcctccacttttagtc 17501997  T
Q  178 cctcatttcagcacgtaagcagaatctg 205  Q
    |||| ||| | |  || |||||||||||    
T  17501996 cctcgtttaaccctgtcagcagaatctg 17501969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 42510210 - 42510167
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcatttca 187  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  42510210 gtccctgtaatttcagattcctccacttttggtccctcatttca 42510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 34749332 - 34749292
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  34749332 tccctgtaatttcagattcctccacttttggtccctcattt 34749292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 42510325 - 42510253
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||| |  |||| ||||||||||||||||||||| |  |||||||||||| ||||| |||||||||||    
T  42510325 atttagattctacccctataatttcagattcttccacttgtattccctcatttcatcacgtcagcagaatctg 42510253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 48072144 - 48072184
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  48072144 tccctgtaatttcagattcctccacttttggtccctcattt 48072184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 13229916 - 13229954
Alignment:
Q  147 cctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13229916 cctgtaatttcagattcctccacttttggtccctcattt 13229954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 4907158 - 4907117
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  4907158 gtccctgtaatttcagattcatccacttttagtccctcattt 4907117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 17606490 - 17606531
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  17606490 gtccctgtaatttcaaattcctccacttttggtccctcattt 17606531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 20995697 - 20995754
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||||||||| ||||||| ||  |||||||||||||||||| | |||||||||||||    
T  20995697 agggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 20995747 - 20995808
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||| | |||||| ||||||||||||||  ||||| ||||| |||||||||||    
T  20995747 gtccctgtaattttatattctttcacttttggtcccttctttcatcacgtcagcagaatctg 20995808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 29696745 - 29696786
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  29696745 gtccctgtattttcagattcctccacttttggtccctcattt 29696786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 33628886 - 33628845
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  33628886 gtccctgtaatttcagattcctctacttttggtccctcattt 33628845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 39711254 - 39711295
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  39711254 gtccctgtaatttcggattcctccacttttggtccctcattt 39711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 30299418 - 30299454
Alignment:
Q  149 tgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30299418 tgtaatttcagattcctccacttttggtccctcattt 30299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 39970837 - 39970801
Alignment:
Q  149 tgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39970837 tgtaatttcagattcatccacttttggtccctcattt 39970801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 27039637 - 27039753
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||| ||||| ||||||||||| |||||||| ||||||||| | |||| |||| |||         | ||||||||||||||||  ||| | |||||||    
T  27039637 agggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtccttgtaaaaaaaaag-tttagattttgtccctacaatataagattct 27039735  T
Q  165 tccacttttggtccctca 182  Q
    |||||| |||||||||||    
T  27039736 tccactattggtccctca 27039753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 20995851 - 20995892
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  20995851 gtccctgtaatttcaaatttctccacttttggtccctcattt 20995892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 215223 - 215191
Alignment:
Q  133 atttagattttgtccctgtaatttcagattctt 165  Q
    ||||||||||||||| |||||||||||||||||    
T  215223 atttagattttgtccttgtaatttcagattctt 215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 39826245 - 39826205
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||| ||||||||||    
T  39826245 tccctgtaatttcatattcctccacttttgatccctcattt 39826205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 43539530 - 43539570
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  43539530 tccctgtaatttcaaattcctccacttttggtacctcattt 43539570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 26385278 - 26385451
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||  |||||||||||||||||||| ||||||||| |||         ||||||||||||||||||||||||| | ||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattctt 26385377  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||| || ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26385378 ccacttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtg 26385451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 24732320 - 24732143
Alignment:
Q  61 ataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcaga 160  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||  |||| |||||||||         |||||||||||||||| |||||||||| |    
T  24732320 ataaagggtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcata 24732222  T
Q  161 ttcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||||||| || |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  24732221 ttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtg 24732143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 18500313 - 18500487
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| | |||||||||||||||  | |||||||||||||         ||||||||||||||||||||||||||| ||||    
T  18500313 aagggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaa-gatttagattttgtccctgtaatttcatattc 18500411  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||| || |||||||||||||||||  || ||| |||||||||||||||||||||||||    
T  18500412 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 18500487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 33714486 - 33714660
Alignment:
Q  69 taaatacatcttttcgtccttgtaatattagcgaattctgatttta--gtccctgtnnnnnnnnn--gatttagattttgtccctgtaatttcagattct 164  Q
    |||||| |||||||||||| |||||||||||||||||| | |||||  ||||||||           |||||||||||||||| |||||||||| |||||    
T  33714486 taaataaatcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattct 33714585  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  33714586 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtg 33714660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 9481182 - 9481321
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         |||||||||| |||||||||||||||| ||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 9481281  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||| |||||||||||| ||||| ||||| |||||||||||    
T  9481282 ccaattttggtccctcctttcatcacgtcagcagaatctg 9481321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 32017885 - 32017746
Alignment:
Q  62 taaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagat 161  Q
    |||||||||||||  ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| ||    
T  32017885 taaagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatat 32017787  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    |||||||||||||||||||| ||||| ||||| ||| ||||    
T  32017786 tcttccacttttggtccctcctttcatcacgtcagcggaat 32017746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 2299389 - 2299483
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||| |||||||||||||| |||||||||| || |||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  2299389 gtccctgtaatttca-attcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtg 2299483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 30617964 - 30618101
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |            |||||||||||||||||||||||||| |||    
T  30617964 aaagggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctt-----taaaaaaatttagattttgtccctgtaatttcatatt 30618058  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
     |||||||||||||||||| ||| | ||||| |||||||||||    
T  30618059 gttccacttttggtccctccttttatcacgtcagcagaatctg 30618101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 30618272 - 30618166
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggacc 230  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| || ||| || ||||| ||||||||||   || ||||||||||||||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggacc 30618173  T
Q  231 aaaagtg 237  Q
    |||||||    
T  30618172 aaaagtg 30618166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 187
Target Start/End: Original strand, 19284130 - 19284250
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| ||||||||| | ||||||||||||||||||   |||||||||  ||         |||||||||||||||||||||||||||||||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  167 cacttttggtccctcatttca 187  Q
    ||||||||||||||| |||||    
T  19284230 cacttttggtccctcctttca 19284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 205
Target Start/End: Complemental strand, 9854270 - 9854126
Alignment:
Q  59 ttataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttca 158  Q
    |||| |||||| |||||  ||||| |||| |||||||||||||||||||| ||||||||  |||          ||||||||||||||| ||||||||||    
T  9854270 ttattaagggttaatactgctttttgtccctgtaatattagcgaattctggttttagtc--tgtaaaaataataatttagattttgtccttgtaatttca 9854173  T
Q  159 gattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
     |||||||||||||||||||||||||||| ||||| |||| ||||||    
T  9854172 tattcttccacttttggtccctcatttcaccacgtcagcaaaatctg 9854126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 26385649 - 26385531
Alignment:
Q  69 taaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttcca 168  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||         ||||||||| |||| |||| ||||||| |||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  169 cttttggtccctcatttca 187  Q
    ||||||||| ||| |||||    
T  26385549 cttttggtctctcctttca 26385531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 30458898 - 30459074
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagatt 162  Q
    |||| ||||||||||||||||||| ||||||||||| |||||  | ||||||| || ||          |||||||||| |||| |||||||||||||||    
T  30458898 aaggataaatacatcttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagatt 30458997  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||| |||||| ||| ||||||||| ||||| |||||||||||  || ||| ||||||||||||| || ||||||||    
T  30458998 cttcaacttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtg 30459074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 9481494 - 9481390
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||| |||| ||| ||  || |||||||| ||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggac 9481395  T
Q  230 caaaa 234  Q
     ||||    
T  9481394 aaaaa 9481390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 24731934 - 24732059
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngat---ttagattttgtccctgtaatttcagat 161  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||          |    |||||||||||||||||||||||||||    
T  24731934 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagat 24732033  T
Q  162 tcttccacttttggtccctcatttca 187  Q
    ||||| |||||||||||||| |||||    
T  24732034 tcttctacttttggtccctcctttca 24732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 32017605 - 32017709
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggacc 230  Q
    |||||||||||||   |||||||||||||||||||||||||||||| | ||| || ||||| |||||||||||  || ||| ||||||||||||||||||    
T  32017605 atttagattttgtt--tgtaatttcagattcttccacttttggtcctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggacc 32017702  T
Q  231 aaaagtg 237  Q
    |||||||    
T  32017703 aaaagtg 32017709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 9154884 - 9154990
Alignment:
Q  71 aatacatcttttcgtccttgtaatatt-agcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccac 169  Q
    ||||| ||||||| ||| ||||||||| ||||||||| |||||||||||||||         |||||||||||||||||||||||||||||||||||||     
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccag 9154983  T
Q  170 ttttggt 176  Q
    |||||||    
T  9154984 ttttggt 9154990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 14680949 - 14681055
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggacc 230  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||| |||||||| ||||| |||||||||||  || ||| ||||| ||| ||| ||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagacc 14681048  T
Q  231 aaaagtg 237  Q
    |||||||    
T  14681049 aaaagtg 14681055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 33637831 - 33637733
Alignment:
Q  141 tttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||| |||||| |||||||| ||||||||| || ||||| |||||||||||  || ||  |||||||||||||||||||||||||    
T  33637831 tttgtccctgtaatttcatattctttcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtg 33637733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 10321737 - 10321893
Alignment:
Q  70 aaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccac 169  Q
    |||||| ||||||||||| |||||||||||||||||| | ||||||||||||             ||||||| | |||||||||||||| |||||| |||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaata---ttagattatatccctgtaatttcatattcttacac 10321833  T
Q  170 ttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgaggg 227  Q
    ||||| |||||||||||| ||||| ||||| |||||  || |||||||||||||| ||||    
T  10321834 ttttgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggg 10321893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 33637625 - 33637698
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||||| |||||  |||| |||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctg 33637698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 10322032 - 10321970
Alignment:
Q  143 tgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||||||| |||||||||||| || ||||| ||||| |||||||||||    
T  10322032 tgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctg 10321970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 2299617 - 2299548
Alignment:
Q  136 tagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||| || || | |||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttcatcaagtcaacagaatctg 2299548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 3230217 - 3230129
Alignment:
Q  89 tgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggtc 177  Q
    |||||||||||||||||| |||||||||||||||         |||||||||||||||| | |||||||| |||||| |||||||||||    
T  3230217 tgtaatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattctttcacttttggtc 3230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 17142744 - 17142799
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcag 188  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtctctcgtttcag 17142799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 26385474 - 26385433
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  26385474 gtccctgtaatttcagattcctccacttttggtccctcattt 26385433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtcc 118  Q
    ||||||||||| ||||||||||| |||||||||||||||||  | |||||||||    
T  18500708 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 24732120 - 24732161
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  24732120 gtccctataatttcagattcctccacttttggtccctcattt 24732161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 33714679 - 33714642
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||| |||||||||||||||||||||    
T  33714679 ctgtaatttcagattcctccacttttggtccctcattt 33714642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 17142834 - 17142798
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccct 180  Q
    |||||||||||||||||||| ||||||||||||||||    
T  17142834 gtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 32017731 - 32017691
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  32017731 tccctgtaatttcaaattcctccacttttggtccctcattt 32017691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 2299337 - 2299396
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||||||||||  | ||||||||  |||||||||||||||||| | |||||||||||||    
T  2299337 aaagggtaaatattttttttcgtctatgtaatattagcgaattccggttttagtccctgt 2299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 30459196 - 30459141
Alignment:
Q  149 tgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    ||||||||||||||||| ||||||||||| ||| ||||| ||||| |||| |||||    
T  30459196 tgtaatttcagattctttcacttttggtctctcctttcatcacgttagcataatct 30459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 33637709 - 33637751
Alignment:
Q  144 gtccctgtaatttcagatt-cttccacttttggtccctcattt 185  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  33637709 gtccctgtaatttcagattcctcccacttttggtccctcattt 33637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 2299692 - 2299635
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||||||||  ||||||||| | |||||||||||||||||| | ||||||| |||||    
T  2299692 agggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 3230059 - 3230018
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| |||||||||| |||| |||||||||||||||||||||    
T  3230059 gtccttgtaatttcatattcctccacttttggtccctcattt 3230018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 18500641 - 18500604
Alignment:
Q  150 gtaatttcagattcttccacttttggtccctcatttca 187  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  18500641 gtaattttagattcttccacttttggtccctcctttca 18500604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 30618147 - 30618184
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  30618147 ctgtaatttcaaattcctccacttttggtccctcattt 30618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 14681193 - 14681141
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||| ||||||| || ||||| |||||| |||||||||||||||| ||||    
T  14681193 atttagactttgtccttgcaattttagattcctccacttttggtcccttattt 14681141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 21069583 - 21069627
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtcc 178  Q
    |||||||| |||||||||||| ||||||||||||| ||| |||||    
T  21069583 tttagattctgtccctgtaatatcagattcttccattttaggtcc 21069627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 21070846 - 21070802
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtcc 178  Q
    |||||||| | |||||||||| ||||||||||||||||| |||||    
T  21070846 tttagattctatccctgtaatatcagattcttccactttaggtcc 21070802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 7689905 - 7689728
Alignment:
Q  62 taaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagat 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||         |||||| |||||||||||||||||||||||    
T  7689905 taaagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagat 7689806  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||| ||||||||| || ||||| |||||||||||  || |||||||||||||||||||| ||||||||    
T  7689805 tcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtg 7689728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 10108751 - 10108575
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||| ||||| ||||||||||| |||||||||||| ||||| | |||||||||||||         ||||||||||||||||||||||||||| |||    
T  10108751 aaagggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatatt 10108652  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||| ||| || ||||| |||||||||||  || |||||||||||||||||||||||||||||    
T  10108651 cttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 10108575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 21147933 - 21148110
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagat 161  Q
    ||||||| ||||| |||||| |||| |||||||||||||||||| | |||||||||||||          ||||||||||||||||||||||||||||||    
T  21147933 aaagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 21148032  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||| ||| || ||||| |||||||||||  |||||| |||||||||||||||||||||||||    
T  21148033 tcttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtg 21148110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 10108366 - 10108509
Alignment:
Q  62 taaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagat 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| ||    
T  10108366 taaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatat 10108465  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||    
T  10108466 tcttccacttttggtccctcctttcatcacgtcagcagaatctg 10108509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 14820677 - 14820500
Alignment:
Q  61 ataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcaga 160  Q
    ||||||||| ||||| |||||| |||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| |    
T  14820677 ataaagggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcata 14820578  T
Q  161 ttcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagt 236  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||  || ||| | ||||||||||||||||||||||    
T  14820577 ttcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaagt 14820500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 43851665 - 43851837
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||||||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaa-gatttagattttgtccctgtaatttcagattctt 43851763  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||| ||||||||| || ||| | |||||||||||  || ||| |||||||||||||||| ||||||||    
T  43851764 ccacttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaagtg 43851837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 17622889 - 17623060
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| |||||||||||||||||||||||||||||    |||||||||||||         |||||||||||||| | |||||||| |||||||    
T  17622889 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgtaaaaaaa--gatttagattttgttc-tgtaattttagattct 17622985  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || ||||| ||||||||||  ||| |||||||||||||||||||||||||||||    
T  17622986 tccacttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtg 17623060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 42112996 - 42113157
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||         |||||||||| |||||||||||||| |||||||| ||||||||||    
T  42112996 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttaagattctttcacttttggt 42113094  T
Q  177 ccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||| ||||| |||||||||||  || ||| ||| |||||||||||||||||||||    
T  42113095 ccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtg 42113157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 26136994 - 26136893
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaa 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  || ||||||||||||||||||||||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaa 26136895  T
Q  233 aa 234  Q
    ||    
T  26136894 aa 26136893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 42606132 - 42605958
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||  |||||| |||| |||||||||||||||||||| ||||||||  |||         ||||||||||||||||| ||||||||| |||||    
T  42606132 agggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattct 42606033  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||| | ||| || |||||||||||||| || ||  |||||||||||||||||||||||||||||    
T  42606032 tccacttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagtg 42605958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 30789519 - 30789680
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||         ||||||||||||||| |||||||||||||||| |||||||||| |    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaatttcagattcctccacttttgat 30789617  T
Q  177 ccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||| ||||| |||| ||||||  || ||||||||||| |||||||| ||||||||    
T  30789618 ccctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaagtg 30789680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 5555249 - 5555074
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| || || ||||||||||| |||||||||||||||||  | |||||||| ||||         ||||||||||||||||||||||||||| ||||    
T  5555249 aagggttaacacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 5555150  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||| ||| || || || |||| ||||||  || |||||||||||||||||||||||||||||    
T  5555149 ttccacttttggtcccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaaaagtg 5555074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 30789887 - 30789746
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| |||||||||||  ||||| | |||||||||||||         ||||||||||||||||||||||||||||||||    
T  30789887 aagggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 30789788  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||| || ||||| ||||| |||| ||||||    
T  30789787 ttccacttttggtccatcgtttcatcacgtcagcaaaatctg 30789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 5554868 - 5555008
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         |||| ||||||||||||| |||||||| |||||    
T  5554868 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattct 5554967  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||  ||||| ||||| |||||||||||    
T  5554968 tccacttttggtcccttctttcatcacgtcagcagaatctg 5555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 14767573 - 14767680
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||| |||||||||||  |||||| ||||||||||||| |||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagac 14767672  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  14767673 caaaagtg 14767680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 22494696 - 22494589
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||  || ||| |||||||||||||||||    
T  22494696 gatttagaatttgtccctgtaatttcaaattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggac 22494597  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  22494596 caaaagtg 22494589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 14820295 - 14820433
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||| | ||||||| |||||         ||||||||||||||||||||||||||| ||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 14820393  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||||| ||| | |||||||||||    
T  14820394 ccacttttggtccctcctttcatcacatcagcagaatctg 14820433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 204
Target Start/End: Complemental strand, 10171522 - 10171383
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||||  |||||||||| |||||||||||||||||| | |||||||||||||          |||||||||||||||||||||||| |||||||    
T  10171522 agggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattct 10171423  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    | |||||||||||||||||| || || || ||||||||||    
T  10171422 ttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 2583700 - 2583525
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattc 163  Q
    ||||||||||  |||||||||||| ||||||||||||||||||  |||||| ||||||          |||||| ||||||||||| |||||||||||||    
T  2583700 agggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattc 2583601  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||| ||||||| || ||| | ||| |||||||  || |||||| |||||||||||||| |||||||    
T  2583600 ttccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtg 2583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 17623268 - 17623126
Alignment:
Q  62 taaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagat 161  Q
    |||||| ||||||| ||||||| ||| |||||||||||| ||||||| ||||||| |||||         |||||||||||||||| |||||||||| ||    
T  17623268 taaaggttaaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaa-gatttagattttgtccttgtaatttcaaat 17623170  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||| ||||| ||||| |||||||||||    
T  17623169 tcttccacttttggtcactcctttcatcacgtcagcagaatctg 17623126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 2583320 - 2583459
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||| | | |||||||||||||||||  ||||||||| | |||         |||||||||||||||||||||||||| |||||||    
T  2583320 gggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattctt 2583419  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    | ||||||| |||||| ||||| ||||| |||||||||||    
T  2583420 ctacttttgatccctcctttcatcacgtcagcagaatctg 2583459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 26532849 - 26532956
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||| || ||||| |||||||||||  || ||| ||||||||||||||||     
T  26532849 gatttagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggat 26532948  T
Q  230 caaaagtg 237  Q
     |||||||    
T  26532949 taaaagtg 26532956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 21148316 - 21148175
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||  ||||||||||| |||||| | |||||||||||||          | ||||||||||||| |||||||||| ||||    
T  21148316 aagggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattc 21148217  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||| ||||||| ||||| || || |||||||||||    
T  21148216 ttccacttttagtccctcctttcatcatgtcagcagaatctg 21148175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 7689523 - 7689644
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||  |  |||||||| |||         ||||||||||| |||| ||||||||||||||||    
T  7689523 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttagattt-gtccttgtaatttcagattct 7689621  T
Q  165 tccacttttggtccctcatttca 187  Q
    ||||||||||||||||| |||||    
T  7689622 tccacttttggtccctcttttca 7689644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 26136683 - 26136824
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| ||||| ||||||||| | ||||||||||||||||||   |||||||||||||          ||||||||||||||| |||||||||||||||    
T  26136683 aagggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattc 26136782  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||| ||||| | |||| ||||| || || |||| ||||||    
T  26136783 ttccaattttgattcctcctttcatcaagtcagcataatctg 26136824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 21144865 - 21144744
Alignment:
Q  84 gtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggtccctcat 183  Q
    |||| |||||||||| ||||||| ||||||||||||| |          ||||||||||||||| ||||||||||||||| |||| |||| |||||| ||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattcctccatttttcgtcccttat 21144766  T
Q  184 ttcagcacgtaagcagaatctg 205  Q
    || | ||||| |||||||||||    
T  21144765 ttaaccacgtcagcagaatctg 21144744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 42605759 - 42605889
Alignment:
Q  70 aaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccac 169  Q
    |||||| ||||||||||| |||||||||| ||||||| |||||||||  ||||          | ||||||||| |||||||||||||| ||||||||||    
T  42605759 aaatacttcttttcgtccatgtaatattaacgaattccgattttagtttctgtaaaaaaaa--aattagattttatccctgtaatttcatattcttccac 42605856  T
Q  170 ttttggtccctcatttcagcacgtaagcagaat 202  Q
    |||||||||||| ||| | ||||| || |||||    
T  42605857 ttttggtccctcctttaatcacgtcagtagaat 42605889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 18044205 - 18044092
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||| | ||||||||| |||          | ||| |||||||||||||||||||||||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccatgtaaaaaaat--aattatattttgtccctgtaatttcagattctt 18044108  T
Q  166 ccacttttggtccctc 181  Q
     | |||||| ||||||    
T  18044107 tcgcttttgatccctc 18044092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 42113361 - 42113241
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||||||||||||||| |||||||||| ||||||  | ||||||| |||||          | ||||||| ||||||| |||||||| ||||    
T  42113361 aagggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaa---aattagattatgtccctttaatttcaaattc 42113265  T
Q  164 ttccacttttggtccctcatttca 187  Q
    ||||||||||| |||||| |||||    
T  42113264 ttccacttttgatccctcctttca 42113241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 43481695 - 43481581
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagatt 162  Q
    |||||||||||  ||||||||||  |||||||||||||||||| | |||||||| ||||          |||||| |||||||||||||||||||| |||    
T  43481695 aagggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaatt 43481596  T
Q  163 cttccacttttggtc 177  Q
    |||||||| ||||||    
T  43481595 cttccactcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 14767816 - 14767746
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||||||| ||||||||| |||  ||||||| ||||| ||||| | |||||||||    
T  14767816 ttagattttgtccctgtaatttcatattcttccagtttgtgtccctcttttcatcacgtcaacagaatctg 14767746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 17623083 - 17623042
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  17623083 gtccctgtaatttcagattcctccacttttggtccctcattt 17623042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 38726755 - 38726803
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||    
T  38726755 tttagattttgtccttgtaatttcagattcttccactttagatccctca 38726803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 22494454 - 22494523
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||| || ||| | ||||| |||||||||||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtccttc-tttaatcacgtcagcagaatctg 22494523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 43481406 - 43481487
Alignment:
Q  158 agattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| |||||| || |||| ||| ||||| ||  || ||||||||||||| |||||| ||||||||    
T  43481406 agattcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtg 43481487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 7689705 - 7689746
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  7689705 gtccctgtaatttcagattcctccacttttgatccctcattt 7689746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 10108552 - 10108593
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  10108552 gtccctgtaatttcaaattcctccacttttggtccctcattt 10108593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 22494566 - 22494607
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  22494566 gtcccagtaatttcagattcctccacttttggtccctcattt 22494607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 42605939 - 42605976
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||| |||||||||||||||||||||    
T  42605939 ctgtaatttcagattcctccacttttggtccctcattt 42605976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 40486627 - 40486744
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| |||||  ||||| |||| |||||||||| ||||||| ||||||||||||||          | |||||||| ||||| |||||||| |||||     
T  40486627 aagggttaatactacttttggtccctgtaatattaacgaattccgattttagtccctgcaaaaaaaaag-tttagattctgtccttgtaattttagatta 40486725  T
Q  164 ttccacttttggtccctca 182  Q
    |||||||||| ||||||||    
T  40486726 ttccacttttagtccctca 40486744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 44162731 - 44162782
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||| |||||||    
T  44162731 tttacattttgttcctgtcatttcagattcttctacttttggtctctcattt 44162782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 35367480 - 35367525
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctc 181  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||    
T  35367480 ttagattttgtccctgtaatttcagattc-tcgacttttgatccctc 35367525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 43851968 - 43851910
Alignment:
Q  140 ttttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagca 198  Q
    ||||||| ||||||||  |||||||||||||||| ||||||| ||||| ||||| ||||    
T  43851968 ttttgtctctgtaattcaagattcttccactttttgtccctcctttcatcacgtcagca 43851910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 2583502 - 2583543
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| ||||||||| |||||||||||    
T  2583502 gtccctgtaatttcaaattcctccacttttagtccctcattt 2583543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 14767703 - 14767662
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| ||||||||||||| |||||||    
T  14767703 gtccctgtaatttcaaattcctccacttttggtctctcattt 14767662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 20877126 - 20877069
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccct 120  Q
    ||||||| ||||| |||||| |||| |||||||| ||||||||| | |||||||||||    
T  20877126 aaagggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 35367409 - 35367466
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||||||||| |||||| |||| || ||||||||||||||| | ||||| |||||||    
T  35367409 agggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 39889673 - 39889628
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtcc 178  Q
    ||||||||| |||||||   ||||||||||||||||||||||||||    
T  39889673 atttagattatgtccctaccatttcagattcttccacttttggtcc 39889628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 40487793 - 40487736
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||| |||||  ||||| |||||||||||||||||||||||   |||||||||||||    
T  40487793 agggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgt 40487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 43851860 - 43851819
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||||||||| ||||||||||    
T  43851860 gtccctgtaatttcatattcctccacttttgatccctcattt 43851819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 20875768 - 20875812
Alignment:
Q  138 gattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    |||| ||||||| | ||||||||||||||||||||| ||||||||    
T  20875768 gattatgtccctattatttcagattcttccacttttagtccctca 20875812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 22848399 - 22848439
Alignment:
Q  147 cctgtaatttcagattcttccacttttggtccctcatttca 187  Q
    ||||||||||||||||||| || |||||||||||| |||||    
T  22848399 cctgtaatttcagattctttcatttttggtccctcgtttca 22848439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 28977686 - 28977734
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctc 181  Q
    ||||||||| ||||||| | |||||| ||| ||||||||||||||||||    
T  28977686 atttagattctgtccctatcatttcatatttttccacttttggtccctc 28977734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 23705039 - 23704866
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||  |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| |||||    
T  23705039 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattct 23704941  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||    
T  23704940 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 23704866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 20458691 - 20458864
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||||| ||||||||| |||||||||| ||||||| | |||||||||||||          |||||||||||||| |||||||||||||||||    
T  20458691 agggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaa-atttagattttgtcgctgtaatttcagattct 20458789  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||    
T  20458790 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 20458864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 20419536 - 20419709
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| | |||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 20419635  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||| ||||||||||||||| || |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  20419636 ccatttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtg 20419709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 12006540 - 12006713
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||          ||| ||||||||||||||||||||||||||||    
T  12006540 agggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattct 12006638  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||| ||||||||| || ||||| |||||||||||  || |||||||||||||||||||| ||||||||    
T  12006639 tccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtg 12006713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 38879723 - 38879893
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||| ||||||||||| ||||||||||||||||||  |||||||| |||||          ||||||||||||||||||||||||||| |||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 38879822  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaa 233  Q
    |||||||||||||||||||| || |||||||||||||||||  || ||||||| |||||||||||||||||    
T  38879823 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaa 38879893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 10409754 - 10409579
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||         ||||||||||||||| ||||||||| |||||    
T  10409754 aaagggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaattttagatt 10409656  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||| ||||||||| || ||||| |||||||||||  || |||||| ||||||||||||| ||||||||    
T  10409655 cttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtg 10409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 12006919 - 12006779
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||         |||||||||||||||||||||||||||||||||    
T  12006919 agggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 12006820  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||| ||||| ||||| |||| ||||||    
T  12006819 tccacttttggtccctcctttcatcacgtcagcaaaatctg 12006779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 25772362 - 25772536
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||  |||||||||  ||||         |||||||||||||||| |||||||||| ||||    
T  25772362 aagggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattc 25772460  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||| ||||||||| || |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  25772461 ttccacttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtg 25772536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 28218175 - 28218318
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagat 161  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||          ||||||||||||||||||||||||||||||    
T  28218175 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 28218274  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||||||| || ||||| |||||||||||    
T  28218275 tcttccacttttggtccctcattccaccacgtcagcagaatctg 28218318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 44816901 - 44817008
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  || |||||||||||||||||||||    
T  44816901 gattttgattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggac 44817000  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  44817001 caaaagtg 44817008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 41600338 - 41600197
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| |||||| |||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||||||||    
T  41600338 aagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 41600239  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||| ||||| ||||| |||| ||||||    
T  41600238 ttccacttttggtccctcctttcatcacgtcagcaaaatctg 41600197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 28218542 - 28218414
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         |||||||||||||||||||||||||||||||||    
T  28218542 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 28218443  T
Q  165 tccacttttggtccctcatttcagcacgt 193  Q
    ||||||||||||||||| ||||| |||||    
T  28218442 tccacttttggtccctcctttcatcacgt 28218414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 20963494 - 20963668
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||  | ||||||||| ||||||||||| |||||||  |||||||||||||          ||||||||||| ||||||||||||| |||||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| |  ||| |||||||||||||  || |||||||||||||||||||||||||||||    
T  20963594 tccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 20963668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 41599958 - 41600131
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||| ||| |||||||||||||||||  | ||||||||| | |          |||||||||||||||||||||||||||||||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattctt 41600057  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||| |||| ||||||||| || ||||| |||||||||||  || |||||||||||||||||||| ||||||||    
T  41600058 ccacatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtg 41600131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 23383879 - 23383739
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||          ||||||||||||||||||||||||||| |||||    
T  23383879 agggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattct 23383780  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||| ||||||||||| ||||| || || | |||||||||    
T  23383779 tccacctttggtccctcctttcatcaagtcaacagaatctg 23383739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 48672658 - 48672518
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||  |||||||||||||||||  | |||||||||||||         |||||||||||| ||||||||||||||||||||    
T  48672658 agggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattct 48672559  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||| ||||| ||||| |||| ||||||    
T  48672558 tccacttttggtccctcctttcatcacgttagcaaaatctg 48672518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 23383499 - 23383673
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||| ||||||||||  ||||||||||| |||||| | ||||||||||| |          |||||||||||||||||| |||||||| |||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattct 23383598  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||| |||| |||||||||| || |||||||||||||||||  || ||| |||||||||||||||||||||||||    
T  23383599 tccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 23383673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 234
Target Start/End: Original strand, 48648263 - 48648431
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||  ||||||||||| |||||||| ||||||||  ||||||||||| |||         ||||||||||||||||||||||||||||||| ||     
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaaaa-gatttagattttgtccctgtaatttcagatttttt 48648361  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    || ||||||||||||||| || |||||||| ||||||||  || ||||||||||||| ||||||||||||    
T  48648362 catttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaa 48648431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 48672276 - 48672452
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn--gatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||| ||||||||||| ||||||||||| |||||  | |||||||| ||||           ||||||||||| ||| |||||||||||||||    
T  48672276 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagatt 48672375  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||| ||||||||| || ||||| |||||||||||  || |||||| ||||||||||||| ||||||||    
T  48672376 cttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtg 48672452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 205
Target Start/End: Complemental strand, 1250573 - 1250445
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||||||||||||||||||||||   |||||||| ||||         |||||||||||||||||| |||||||| |||||||||||||||||    
T  1250573 tcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccacttttggt 1250474  T
Q  177 ccctcatttcagcacgtaagcagaatctg 205  Q
    ||||| ||||| ||||| || ||||||||    
T  1250473 ccctcctttcatcacgtcagaagaatctg 1250445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 16995200 - 16995338
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||  |||||||||||||||||  | ||||||| |||||          |||||||||||||||||||||||||||||||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattctt 16995298  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| |||| || ||||| |||||||||||    
T  16995299 ccacttttggtcccacattccaccacgtcagcagaatctg 16995338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 31851242 - 31851412
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| ||||||||||||| ||||||||| |||||  ||||||||| |||||          ||||||||| ||||  |||||||||| ||| |||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgtaaaaaaaa--atttagattctgtcattgtaatttcatatttttc 31851339  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||| || ||| ||||| ||||| |||||||||||  || |||||||||||||||||||||||||||||    
T  31851340 cacttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 31851412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 23704662 - 23704782
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||| | ||||| || ||||         |||||| |||||||||||||||||||||||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaa-gatttacattttgtccctgtaatttcagattctt 23704760  T
Q  166 ccacttttggtccctcatttca 187  Q
    |||||||||||||||| |||||    
T  23704761 ccacttttggtccctcctttca 23704782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 24195108 - 24195035
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  24195108 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatctg 24195035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 25772710 - 25772570
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||  ||||||||||| | ||||||||| ||||||   |||||||||||||         |||||||||||||||||||||||||||||||||    
T  25772710 agggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 25772611  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    || |||||||||||||| ||||| || || | |||||||||    
T  25772610 tctacttttggtccctcctttcatcaagtcaacagaatctg 25772570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 20419915 - 20419793
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||| |||||| |||| |||||||||| ||||||| | |||||||||||||          |||||||||||||||||||||||||||||||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 20419816  T
Q  165 tccacttttggtccctcatttca 187  Q
    || |||||||||||||| |||||    
T  20419815 tctacttttggtccctcctttca 20419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 236
Target Start/End: Original strand, 7657967 - 7658142
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn--gatttagattttgtccctgtaatttcagat 161  Q
    |||| ||||||| ||||||||||| |||||||||||||||||  | ||||| |||||||           |||||||||| ||||| |||||||||| ||    
T  7657967 aaggctaaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaat 7658066  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctgtat-atggcacgtaaaatgagggaccaaaagt 236  Q
    |||| |||||||||||| || ||||| ||||| |||| |||||| || ||| ||||||||||||||||| ||||||    
T  7658067 tcttacacttttggtccatcctttcatcacgtcagcaaaatctgcatcatgtcacgtaaaatgagggactaaaagt 7658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 20459069 - 20458954
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| ||||||||||| |||||| | ||| ||| |||||         ||||||||||||||| |||||||||||||||||    
T  20459069 agggtaaatacctcttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattct 20458971  T
Q  165 tccacttttggtccctc 181  Q
    |||||||||||||||||    
T  20458970 tccacttttggtccctc 20458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 6465855 - 6465993
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  | ||||||||| |||||||||||||||||| | |||||||||||||          ||||||||| ||| | |||||||||||||||||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaat-atttagattatgttcttgtaatttcagattctt 6465953  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||||| ||||| || ||||||||    
T  6465954 ccacttttggtccctcctttcatcacgtcagaagaatctg 6465993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 38880035 - 38879963
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || | |||||||||    
T  38880035 atttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcaccaagtcaacagaatctg 38879963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 178
Target Start/End: Complemental strand, 20963872 - 20963760
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| |||||| |||| |||||||||||||||||| | |||||||||||||          |||||||||| |||||||||||||||||||||    
T  20963872 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaa-atttagatttagtccctgtaatttcagattct 20963774  T
Q  165 tccacttttggtcc 178  Q
    | ||||||||||||    
T  20963773 ttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 33162918 - 33162740
Alignment:
Q  62 taaagggtaaatacatcttttcgtccttgtaatattagcgaatt-ctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcag 159  Q
    |||||||||||||| ||||||||||  ||||||||||||||||| ||| ||||||||| | |          ||||| |||| ||||  ||||||||||     
T  33162918 taaagggtaaatacctcttttcgtctctgtaatattagcgaatttctg-ttttagtccttataaaaaaaaaagatttggattatgtcattgtaatttcaa 33162820  T
Q  160 attcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||| |||  |||||||| ||||| |||||||||||  || ||||||| |||||||||||||||||||||    
T  33162819 attcttccacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtg 33162740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 48648603 - 48648468
Alignment:
Q  68 gtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttcc 167  Q
    |||||||| |||||||||||  ||||||||||||||||  |||||||||| || |         |||||||||||||||  |||||||| ||||||||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctataaaaaaa--gatttagattttgtctatgtaattttagattcttcc 48648506  T
Q  168 acttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||| ||||||||| ||||| ||||| | |||||||||    
T  48648505 acttctggtccctcctttcatcacgtcaacagaatctg 48648468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 7658276 - 7658208
Alignment:
Q  137 agattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||| |||| ||||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttggtctctcctttcatcacgtcagcaaaatctg 7658208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtcc 118  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 31851548 - 31851481
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||| | ||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacatcagcagaat 31851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 10409440 - 10409513
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||||  ||||| ||| | |||| ||||||    
T  10409440 gatttagattttgtccttgtaatttcagattcttctacttttagtcccttctttcatcacttcagcaaaatctg 10409513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 23704843 - 23704884
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  23704843 gtccctgtaatttcagattcctccacttttggtccctcattt 23704884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 24194929 - 24194978
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttc-cacttttggtccct 180  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  24194929 gatttagattttgtccctgtaatttcagattcctctcacttttggtccct 24194978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 1250273 - 1250345
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||| ||||||||| | |||||| |||||||||||||||||||| |||||| || ||||| ||| |||||||    
T  1250273 atttaaattttgtccttttaattttagattcttccacttttggtctctcattccaccacgtcagctgaatctg 1250345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 24194973 - 24195016
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcatttca 187  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  24194973 gtccctataatttcagattcctccacttttggtccctcatttca 24195016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 7842467 - 7842546
Alignment:
Q  93 atattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccactttt 173  Q
    |||||||||||||||| |||||||||||||         | |||||||| ||||||||||||||||||||| |||||||||    
T  7842467 atattagcgaattctggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaatttcagattcctccactttt 7842546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 20419732 - 20419691
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  20419732 gtccctgtaatttcatattcctccacttttggtccctcattt 20419691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 20458887 - 20458846
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  20458887 gtccttgtaatttcagattcctccacttttggtccctcattt 20458846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 20963691 - 20963650
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  20963691 gtccttgtaatttcatattcttccacttttggtccctcattt 20963650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 25772559 - 25772518
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  25772559 gtccttgtaatttcagattcctccacttttggtccctcattt 25772518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 41600154 - 41600113
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  41600154 gtccctgtaatttcagattcctccacttttgatccctcattt 41600113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 44817031 - 44816990
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  44817031 gtccttgtaatttcagattcctccacttttggtccctcattt 44816990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 14800966 - 14800918
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    |||||||||||||||||| |||||||||||||||||  |||||| ||||    
T  14800966 tttagattttgtccctgtcatttcagattcttccacaattggtctctca 14800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 15247958 - 15247910
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    |||||||||||||||||| |||||||||||||||||  |||||| ||||    
T  15247958 tttagattttgtccctgtcatttcagattcttccacaattggtctctca 15247910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 6466037 - 6466080
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcatttcag 188  Q
    |||||||||||||| |||  ||||||||||||||||||||||||    
T  6466037 tccctgtaatttcatattactccacttttggtccctcatttcag 6466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 14630403 - 14630450
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    ||||||| ||||||||| |||||||||||||||||  |||||||||||    
T  14630403 ttagattctgtccctgtcatttcagattcttccacaattggtccctca 14630450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 28218359 - 28218320
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcat 183  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  28218359 gtccctgtaatttcagattactccacttttggtccctcat 28218320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 38880099 - 38880048
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtc 117  Q
    |||||||||| ||||||||||| |||||||||||| ||||| | ||||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc 38880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 44817142 - 44817092
Alignment:
Q  137 agattttgtccctgtaatttcagattcttccacttttggtccctcatttca 187  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||| |||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccctcttttca 44817092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 10409556 - 10409597
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  10409556 gtccttgtaatttcagattcctccacttttgatccctcattt 10409597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 12006732 - 12006695
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  12006732 ctgtaatttcagattcctccacttttgatccctcattt 12006695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 33131700 - 33131749
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    ||||||||| ||||||| | ||||||||||||||| |||||| |||||||    
T  33131700 atttagattctgtccctatcatttcagattcttccgcttttgctccctca 33131749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 48648457 - 48648420
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctc 181  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  48648457 gtccctgtaatttcagattcctccaattttggtccctc 48648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 48672475 - 48672434
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  48672475 gtccttgtaatttcagattcctccacttttgatccctcattt 48672434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 31851434 - 31851394
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||  |||||||||||||||||||||    
T  31851434 tccctgtaatttcatatttctccacttttggtccctcattt 31851394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 71 - 237
Target Start/End: Original strand, 37012712 - 37012880
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccact 170  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||| |||         |||||||||||||||||||||||||||||||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  171 tttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||| ||| || ||||| |||||||||||  || |||||||||||||||||||||||||||||    
T  37012812 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 37012880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 9619359 - 9619184
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||         |||||||||||||||| |||||||||| ||||    
T  9619359 aagggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattc 9619260  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctgtata--tggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||  |||||||||||| |||||| ||||||||    
T  9619259 ttccacttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagtg 9619184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 38573968 - 38574141
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| ||||||||||| |||||| ||||||| |||||||         ||||||||||||||||||||||||||| |||||    
T  38573968 agggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattct 38574066  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || ||||| |||||||||||  || |||||| ||||||||||||||||||||||    
T  38574067 tccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagtg 38574141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 9397077 - 9396904
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||| ||||| | |||||||||||||         |||||||||||||||||||||||||||||||||    
T  9397077 agggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagattct 9396979  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||| || ||||| || ||||| |||||||||||  || ||| |||||||||||||||||||||||||    
T  9396978 tccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 9396904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 26252615 - 26252442
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  ||||||||||| ||||||||||||||||||   ||||||| |||||         ||||||||||||||||||||||||||| ||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 26252516  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||| |||| ||  ||||||||||||||||  || |||||||||||||||||||||||||||||    
T  26252515 ccacttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 26252442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 9516611 - 9516783
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||  ||||||||||| |||||||||||||||||| | ||||||||| |||         |||||||||||||||| |||||||||| |||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||| || |||||||||||||||||  || |||  ||||||||||||||||||||||||    
T  9516711 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtg 9516783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 31944332 - 31944155
Alignment:
Q  62 taaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagat 161  Q
    |||||||||||||| |||||||||||||||||||||||||||||  | |||||||| ||||          | ||||||||||||| |||||||||| ||    
T  31944332 taaagggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatat 31944233  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctgtata--tggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||| |||||||||| || ||||| | ||||||||| |||  ||||||||||||||||||||||||||||    
T  31944232 tcttccactttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagtg 31944155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 31090060 - 31090234
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||| |||||| |||| ||||||||||| |||||  |||||||||||||||          ||||||||||||||||||||||||||| |||||    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 31090159  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||| ||  || |||| ||||||||||| ||||||||||||    
T  31090160 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagtg 31090234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 34063983 - 34064155
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| ||||||||||| |||||||||| ||||||||  |||||||||||||         ||||||||||||||| |||||||||||||||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||| || ||| | ||| ||||||   || |||||| |||||||||||||| |||||||    
T  34064083 cacttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaaaagtg 34064155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 35376508 - 35376333
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||| ||||||  ||||||||||| |||||||||||| |||||   |||||||||||||         |||||| |||||||||||||||||||||| |    
T  35376508 aaaggataaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaa-gatttaaattttgtccctgtaatttcagaat 35376410  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||||| || ||||| |||| |||||||||  ||| |||||||||||||||||||||||||    
T  35376409 cttccacttttggtccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaagtg 35376333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 7819322 - 7819219
Alignment:
Q  136 tagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaa 233  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||  || |||||||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 7819223  T
Q  234 agtg 237  Q
    ||||    
T  7819222 agtg 7819219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 46046429 - 46046597
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| | ||||||||| |||||||||||||||||| |||||||||||||||          |  ||||||||||||||||||||||| |||||    
T  46046429 agggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa------aaatagattttgtccctgtaatttcatattct 46046522  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||| ||||||||| || ||||| || ||||||||  || |||||||||||||||||||| ||||||||    
T  46046523 tccacttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaaagtg 46046597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 67 - 237
Target Start/End: Complemental strand, 15641093 - 15640920
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattctt 165  Q
    ||||||||| ||||||||||||||||||||||| |||||| | ||||| | |||||          |||||||||| |||||||||||||||||||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattctt 15640994  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||| |||||||||| ||||| |||||||| ||  || ||| |||||||||||| ||||||||||||    
T  15640993 ccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggaccaaaagtg 15640920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 9618982 - 9619119
Alignment:
Q  68 gtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttcc 167  Q
    |||||||| | ||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttcc 9619081  T
Q  168 acttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| ||||| || || | |||||||||    
T  9619082 acttttggtccctcctttcatcaagtcaacagaatctg 9619119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 46046803 - 46046663
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| | ||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||||||||    
T  46046803 aagggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 46046705  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||| |||||| ||||| ||||| |||| ||||||    
T  46046704 ttccacttttgatccctcctttcatcacgtcagcaaaatctg 46046663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 38574343 - 38574219
Alignment:
Q  69 taaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttcca 168  Q
    ||||||| | ||||||||| |||||||||||||||||||| |||||||||||||         ||||||||||||||||||||||||||| |||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  169 cttttggtccctcatttcagcacgt 193  Q
    ||||||||||||| ||||| |||||    
T  38574243 cttttggtccctcctttcatcacgt 38574219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 237
Target Start/End: Complemental strand, 48260126 - 48259956
Alignment:
Q  68 gtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttcc 167  Q
    |||||||  ||||||||||| ||||||||||||||||| |||||||| || ||||         ||||||||||||||||||||||||||| ||||||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaattcttcc 48260028  T
Q  168 acttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||| || |||||| || ||||| |||| ||||||  || |||||||||||||||||||| ||||||||    
T  48260027 acttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggatcaaaagtg 48259956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 3018014 - 3018151
Alignment:
Q  69 taaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattcttcc 167  Q
    ||||||| ||||||||||| |||||||||||||||||| | |||||||||| ||          ||||||||||||||||||||||||||| ||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  168 acttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| ||||| ||||| |||||||||||    
T  3018114 acttttggtccctcctttcatcacgtcagcagaatctg 3018151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 9396702 - 9396838
Alignment:
Q  69 taaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttcca 168  Q
    ||||||| ||||||||||| |||||||||||||||||  |||||||||| ||||         |||||||||||||||||| |||||||| ||| |||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  169 cttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||| ||||| ||||| |||||||||||    
T  9396802 cttttggtccctcctttcatcacgtcagcagaatctg 9396838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 35376164 - 35376299
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||         ||||||||||||||| ||||||||| |||||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaa-gatttagattttgtctctgtaattttagattcttc 35376262  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatc 203  Q
    ||||||||||| ||| ||||| ||||| |||||||||    
T  35376263 cacttttggtctctcctttcatcacgtcagcagaatc 35376299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 3273996 - 3273836
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||||||||  ||||||||||||||||  | ||||||||||| |         |||||||||||| |||||||||||||||||||||    
T  3273996 gggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaa-gatttagattttatccctgtaatttcagattctt 3273899  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagg 226  Q
    ||||||||| |||||||||||| ||||| || ||||||||  || ||||||||||||||||||    
T  3273898 ccacttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg 3273836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 13131943 - 13132114
Alignment:
Q  69 taaatacatcttttcgtccttgtaatattagcgaatt-ctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||          |||||||||| ||| | ||||||||||||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctg-ttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttc 13132041  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||| |||||||||||| ||||| |||||||||||  || ||| ||||||||||||||| | |||||||    
T  13132042 cacttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtg 13132114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 37013086 - 37012946
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||          ||| |||||||||||||||||||||| ||||    
T  37013086 aagggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaatt-agattttgtccctgtaatttcatattc 37012988  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| ||| ||||| ||||| |||| ||||||    
T  37012987 ttccacttttggtcactcctttcatcacgtcagcaaaatctg 37012946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 31090441 - 31090318
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||  ||||||||||| |||||||||||||||||  |||||||||||||||          | |||||||||||||||||||||||||||||    
T  31090441 aagggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattc 31090342  T
Q  164 ttccacttttggtccctcatttca 187  Q
    ||| |||||||||||||| |||||    
T  31090341 ttctacttttggtccctcctttca 31090318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 4356187 - 4356086
Alignment:
Q  138 gattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaag 235  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| ||| || ||||| |||||||||||  || ||| |||||||||||||||||||||||    
T  4356187 gattttgtctctgtaatttcaaattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaag 4356088  T
Q  236 tg 237  Q
    ||    
T  4356087 tg 4356086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 9516988 - 9516867
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  ||||||||||| |||||||||||||||||  | |||||||| ||||         ||||||||||||||||||||||||||||||||||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 9516889  T
Q  166 ccacttttggtccctcatttca 187  Q
    | |||||||||||||| |||||    
T  9516888 ctacttttggtccctcctttca 9516867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 48579932 - 48580039
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggac 229  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||||| ||| || ||||| ||||||||||   || ||||||||||||||||||||     
T  48579932 gatttagattttgtctctgtaatttcagattctttcaattttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggag 48580031  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  48580032 caaaagtg 48580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 3018377 - 3018217
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||| |||||||||| ||||||  | |||||||||||||         ||||||||||| |||| |||||||||||||||| |||||||||||    
T  3018377 tcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaa-gatttagattt-gtccgtgtaatttcagattctaccacttttggt 3018280  T
Q  177 ccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||| ||| || ||||| |||| ||||||  || ||| |||||||||||||||||||||||||    
T  3018279 cccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtg 3018217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 18667596 - 18667494
Alignment:
Q  137 agattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    |||||||| ||||||||||||||||||||||| |||| |||||| ||| || ||||| || ||||||||  || ||||||||||||||||||||||||||    
T  18667596 agattttgaccctgtaatttcagattcttccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaa 18667497  T
Q  235 gtg 237  Q
    |||    
T  18667496 gtg 18667494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 31943949 - 31944077
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattc 163  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | ||||||| |||||          ||||||||||||||||||||||||||| ||||    
T  31943949 agggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattc 31944047  T
Q  164 ttccacttttggtccctcatttcagcacgt 193  Q
    |||||||||||||| ||| ||||| |||||    
T  31944048 ttccacttttggtctctcctttcatcacgt 31944077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 202
Target Start/End: Original strand, 15640727 - 15640851
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||| |||||||||||||||||| | ||||||| |||||         ||||||||||||||||||||||||||| |||||| ||||||||||    
T  15640727 tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctttcacttttggt 15640825  T
Q  177 ccctcatttcagcacgtaagcagaat 202  Q
    ||||| ||||| ||| | ||||||||    
T  15640826 ccctcctttcatcacatcagcagaat 15640851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 34064294 - 34064221
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||| |||||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctg 34064221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 3273620 - 3273743
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatt-tagattttgtccctgtaatttcagattc 163  Q
    ||||||||||  ||||||||||| |||||||||||||||||| |||||||||||| ||           || ||||||||||||||||||||||| ||||    
T  3273620 agggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattc 3273719  T
Q  164 ttccacttttggtccctcatttca 187  Q
    |||||||||||||||||| |||||    
T  3273720 ttccacttttggtccctcctttca 3273743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 194
Target Start/End: Original strand, 12904745 - 12904874
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||  ||||||||||| | ||||||||||||||| || |||||||||||||          ||||||||||||||| | |||||||||||||    
T  12904745 aagggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaa-atttagattttgtccttataatttcagattc 12904843  T
Q  164 ttccacttttggtccctcatttcagcacgta 194  Q
    |||||||||||||| |||||| || ||||||    
T  12904844 ttccacttttggtctctcattccaccacgta 12904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 18713272 - 18713166
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggac 229  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| || ||||| ||||||||||   || || | ||||||| ||||||||    
T  18713272 gatttagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggac 18713173  T
Q  230 caaaagt 236  Q
    |||||||    
T  18713172 caaaagt 18713166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 48259820 - 48259938
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||  ||||||||||| |||||||||||||||||| | ||||| |||||||         |||||||||||||||| ||||||||||||||    
T  48259820 aaagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagatt 48259919  T
Q  163 cttcc-acttttggtccct 180  Q
    | ||| |||||||||||||    
T  48259920 cctcctacttttggtccct 48259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 26252337 - 26252407
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || | |||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctg 26252407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 7819080 - 7819141
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  7819080 gatttagattttgtccctgtaatttcagattcttccacttttggttcctcctttcatcacgt 7819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 13132318 - 13132180
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| | ||||||||| |||||||||||||||||  ||||||||||| |||         |||||||||| |||||||||||||||| |||||    
T  13132318 agggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtcc-tgtaaaaaaaa-gatttagattctgtccctgtaatttcatattct 13132221  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||  ||||| ||  | |||||||||||    
T  13132220 tccacttttggtcccttctttcatcaaatcagcagaatctg 13132180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 48580239 - 48580108
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccact 170  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||| |||   |         ||||||||||||||||||||||||||| ||| |||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttccact 48580140  T
Q  171 tttggtccctcatttcagcacgtaagcagaat 202  Q
    ||||||||||| ||||| ||| | ||||||||    
T  48580139 tttggtccctcctttcatcaccttagcagaat 48580108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 4355949 - 4356020
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||  |||||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||    
T  4355949 tttagattttgtctatgtaatttcatattctttcacttttggtccctcatttcatcacgttagcagaatctg 4356020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 18713026 - 18713099
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||| ||||| |||| ||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctg 18713099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 12904964 - 12904874
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaat 154  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||         |||||| ||||||||||||||||    
T  12904964 aagggtaaatacatcttttcgtttatgtaatattagcgaattttgattttagtccctgtaaaaaaaaagatttaaattttgtccctgtaat 12904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 31218360 - 31218303
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt 122  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||    
T  31218360 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 41946962 - 41947020
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctg 121  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||| | ||||||||||||    
T  41946962 aaagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 43312227 - 43312324
Alignment:
Q  84 gtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggtccctc 181  Q
    |||| |||||||||||| ||||| |||||||||||||||          ||||| ||| ||||||||||||||||||||| ||||||||| |||||||    
T  43312227 gtccctgtaatattagcaaattccgattttagtccctgtaaaaaaaaaaatttaaattctgtccctgtaatttcagattcctccacttttagtccctc 43312324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 9516806 - 9516765
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  9516806 gtccctgtaatttcagattcctccacttttggtccctcattt 9516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 36888991 - 36888919
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||| | |  || |||||||||||    
T  36888991 atttagattatgtccctgtaatttcagattcctccacttttagtccctcgtttaaccttgtcagcagaatctg 36888919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 36887678 - 36887796
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| ||||| |||||| |||| ||||||||||||||||| || |||||||||||||           ||||||||   ||||| | |||| ||||||    
T  36887678 aagggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgtaaaaaaaaaagtttagattccatccctatcatttgagattc 36887777  T
Q  164 ttccacttttggtccctca 182  Q
    |||||||||||||||||||    
T  36887778 ttccacttttggtccctca 36887796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 31083408 - 31083362
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccc 179  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  31083408 atttagattttgtccctatcatttgagattcttccacttttggtccc 31083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 31944132 - 31944173
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  31944132 gtccatgtaatttcagattcctccacttttggtccctcattt 31944173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 34064178 - 34064137
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  34064178 gtccctgtaatttcagattcctccacttttagtccctcattt 34064137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 41947165 - 41947120
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccct 180  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||    
T  41947165 ttagattttgtccttgtaatttcatatttttccacttttggtccct 41947120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 46046620 - 46046579
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  46046620 gtccctgtaatttcagattcctccacttttgatccctcattt 46046579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 9396882 - 9396922
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  9396882 tccctgtaatttcatattcctccacttttggtccctcattt 9396922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 12520707 - 12520778
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||||||||||||| ||||||||| || |||| ||| | |  || |||||||||||    
T  12520707 tttagattttgtccctataatttcagattcctccacttttagttcctcgtttaaccctgtcagcagaatctg 12520778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 18667671 - 18667628
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattc 106  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||    
T  18667671 aaagggttaatacctcttttcgtccctgtaatattagcgaattc 18667628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 20068518 - 20068589
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctgt 206  Q
    ||||||||||||||| | ||||  ||||||||||||||||||||||| ||  | || || ||||||||||||    
T  20068518 ttagattttgtccctatcatttgtgattcttccacttttggtccctcgttgtaacaggtcagcagaatctgt 20068589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 20069610 - 20069539
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||| ||||||| | |||| |||||||||||||||||||| ||||||  | || || |||||||||||    
T  20069610 tttagattatgtccctatcatttgagattcttccacttttggtctctcattgaaacatgtcagcagaatctg 20069539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 31082252 - 31082323
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||| ||||||| | |||| |||||||||||||||||| ||||||||  | || || |||||||||||    
T  31082252 tttagattctgtccctatcatttgagattcttccacttttggcccctcattgaaacatgtcagcagaatctg 31082323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 26252418 - 26252460
Alignment:
Q  144 gtccctgtaatttcagatt-cttccacttttggtccctcattt 185  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  26252418 gtccctgtaatttcagattcctcccacttttggtccctcattt 26252460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 3018194 - 3018235
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||| |||||||| |||| |||||||||||||||||||||    
T  3018194 gtccctataatttcaaattcctccacttttggtccctcattt 3018235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 4356063 - 4356104
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| |||||||||| |||| |||||||||||||||||||||    
T  4356063 gtccttgtaatttcaaattcctccacttttggtccctcattt 4356104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 7819196 - 7819237
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| |||||||||| |||| |||||||||||||||||||||    
T  7819196 gtccatgtaatttcatattcctccacttttggtccctcattt 7819237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 9619161 - 9619198
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctc 181  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  9619161 gtccctgtaatttcagattcctccacttttgctccctc 9619198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 18667471 - 18667512
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||| | |||| |||||||||||||||||||||    
T  18667471 gtccctgtaattttaaattcctccacttttggtccctcattt 18667512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 31090257 - 31090216
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||| |||||||||||||| |||||||||||||| ||||||    
T  31090257 gtccccgtaatttcagattcctccacttttggtccttcattt 31090216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 37012903 - 37012862
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| |||||||||| |||| |||||||||||||||||||||    
T  37012903 gtccttgtaatttcaaattcctccacttttggtccctcattt 37012862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 38574160 - 38574123
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  38574160 ctgtaatttcatattcctccacttttggtccctcattt 38574123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 43313566 - 43313533
Alignment:
Q  89 tgtaatattagcgaattctgattttagtccctgt 122  Q
    |||||||||||||||||||| |||||||||||||    
T  43313566 tgtaatattagcgaattctggttttagtccctgt 43313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 48259933 - 48259974
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||| ||||||||||| |||||||||| ||||||||||    
T  48259933 gtccctgttatttcagattcctccacttttgatccctcattt 48259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 15640902 - 15640938
Alignment:
Q  149 tgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  15640902 tgtaatttcagattcctccacttttggtccatcattt 15640938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 36699535 - 36699483
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||| |||||||||||||| ||||||||| ||||| |  |||||||||    
T  36699535 atttagattatgtccctgtaattttagattcttctactttcgaaccctcattt 36699483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtcc 118  Q
    |||||||||  ||||||||||| |||||||||||||||||  | |||||||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 24837163 - 24837342
Alignment:
Q  60 tataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcag 159  Q
    |||| ||||||||||| ||||||||||| ||||||| |||||||||| | |||||||||||||         |||||||||||||||| ||||||||||     
T  24837163 tatatagggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcat 24837262  T
Q  160 attcttccacttttggtccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||  |||| ||||||||||||||| ||||||||    
T  24837263 attcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtg 24837342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 31799640 - 31799813
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| | |||||||||||||||| | ||| |||||||||         ||||||||||||||||||||||||||||||||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 31799739  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||| ||| || |||||||||||||| |||||  |||||| ||||||||||||||||||||||    
T  31799740 ccacttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagtg 31799813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 234
Target Start/End: Original strand, 6817121 - 6817292
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| ||||||||||||||||||||||| |||||| | |||||||||||||         |||||||||| ||||| |||||||||||||||    
T  6817121 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattatgtccatgtaatttcagattc 6817219  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    |||||||||||||||||||||||| ||||| |||||||||||  || |||||||||||||| |||||||||||    
T  6817220 ttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaa 6817292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 17762661 - 17762487
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||| |||||||||||||         |||||||||||||||||  ||||||||||||||    
T  17762661 agggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattct 17762562  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||| ||  || |||| || |||||||||||||||||||||    
T  17762561 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagtg 17762487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 23979279 - 23979117
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagg 226  Q
    |||||||||||||||||||||| ||||| |||||||||||  || ||| ||||||||||||||    
T  23979179 ccacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagg 23979117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 71 - 237
Target Start/End: Original strand, 7125923 - 7126090
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccact 170  Q
    ||||| ||||||||| | |||||||||||||||||| |||||||||||||||         |||||||||||||||||| ||||||||||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtccctataatttcagattcttccact 7126021  T
Q  171 tttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||| ||| || ||||| |||||||||||  || |||||||||||||||||||||||||||||    
T  7126022 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 7126090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 14144280 - 14144106
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||| ||||| ||||||||||  |||||||||| ||||||| |||||||||||||||         ||||||||||||||||||||||||||| |||||    
T  14144280 agggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 14144181  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||| ||| || ||||| | |||||||||  || |||||||||||||||||||||||||||||    
T  14144180 tccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 14144106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 18336833 - 18336661
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| ||||| |||||||||||| | |||||||||||||         ||||||||||||||||||||||||||||||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 18336735  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||| ||||| ||| || || ||||||||||| |||||  ||| |||||||||||||||||||||||||    
T  18336734 ccacttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggaccaaaagtg 18336661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 30512281 - 30512459
Alignment:
Q  59 ttataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttca 158  Q
    ||||||||||||||||  ||||||||||| ||||||||||| ||||| || |||||||||||||         ||||||||||| |||||||||||||||    
T  30512281 ttataaagggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaag-gatttagatttggtccctgtaatttca 30512379  T
Q  159 gattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgt-aaaatgagggaccaaaag 235  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||  || ||||||||| |||||||||||| |||||    
T  30512380 gatttttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30512459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 30552621 - 30552799
Alignment:
Q  59 ttataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttca 158  Q
    ||||||||||||||||  ||||||||||| ||||||||||| ||||| || |||||||||||||         ||||||||||| |||||||||||||||    
T  30552621 ttataaagggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaag-gatttagatttggtccctgtaatttca 30552719  T
Q  159 gattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgt-aaaatgagggaccaaaag 235  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||  || ||||||||| |||||||||||| |||||    
T  30552720 gatttttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 993751 - 993920
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| ||||||||||  |||||||||||||||||| | |||||||||||||          | |||||||| |||| |||||||||| |||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaa---aattagatttagtccttgtaatttcatattcttc 993847  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||| || |||||||||||||||||  || ||| |||||||||||||||||||||||||    
T  993848 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtg 993920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 14143899 - 14144040
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| |||    
T  14143899 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatatt 14143997  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| |||||||||| ||||| || ||||||||    
T  14143998 cttccacttttggtacctcatttcatcacgtcagtagaatctg 14144040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 4918988 - 4919163
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattc 163  Q
    ||||||||||| ||||||| ||  |||||||||||||||||  | ||||||| |||||          ||||||||||||||||||||||||||| ||||    
T  4918988 agggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 4919087  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||||| || |||||||||||||| ||  || |||| ||||||||||||||||||||||||    
T  4919088 ttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtg 4919163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 17762277 - 17762421
Alignment:
Q  60 tataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcag 159  Q
    |||||||||||||||| |||||| |||| |||||||||||||||||| | |||||||||||||         |||||| ||||||| |||||||||||||    
T  17762277 tataaagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttatattttgttcctgtaatttcag 17762375  T
Q  160 attcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||    
T  17762376 attcttccacttttggtccctcctttaatcacgtaagcagaatctg 17762421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 20709278 - 20709385
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||  || |||||||||||||||||||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 20709377  T
Q  230 caaaagtg 237  Q
     |||||||    
T  20709378 aaaaagtg 20709385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 24074614 - 24074507
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||| |||| | ||||| |||||||||||  ||||||||||||||||||||||||    
T  24074614 gatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatctgcatatatggcacgtaaaatgagggac 24074515  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  24074514 caaaagtg 24074507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 202
Target Start/End: Original strand, 14411696 - 14411833
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||         |||||| ||||||||  ||||||||||||||||    
T  14411696 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattct 14411795  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    ||||||||||||||||| ||||| ||||| ||||||||    
T  14411796 tccacttttggtccctcctttcatcacgtcagcagaat 14411833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 7126296 - 7126156
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||| ||| |||||||||||||||||| | ||||||||  |||         ||||||||||||||||||||||||||| |||||    
T  7126296 agggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 7126197  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||| ||||| ||||| |||||||||||    
T  7126196 tccacttttggtccctcctttcatcacgtcagcagaatctg 7126156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 24074302 - 24074442
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||  | |||||||||||||          |||||||||||||| ||||||||||| |||||    
T  24074302 agggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattct 24074401  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||| ||||| ||||| |||||||||||    
T  24074402 tccacttttggtccctcctttcatcacgtcagcagaatctg 24074442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 14411977 - 14411871
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggacc 230  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||   || ||| ||||||||||||||||||    
T  14411977 atttagattttgtccttgtaatttcagattcttccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggacc 14411878  T
Q  231 aaaagtg 237  Q
    |||||||    
T  14411877 aaaagtg 14411871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 27158988 - 27159161
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||    |||||||| | ||         |||||| ||||||||||||||||||||||||    
T  27158988 aaagggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaa-gatttaaattttgtccctgtaatttcagatt 27159086  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctgtatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||| ||| || ||||| |||| |||||  ||| |||||||||||||||||| ||||||||    
T  27159087 cttccacttttggtcccttattccaccacgtcagcaaaatctacatacggcacgtaaaatgagggatcaaaagtg 27159161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 205
Target Start/End: Original strand, 29444817 - 29444945
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||         |||||||||| ||||| |||||||||| ||||||| |||||||||    
T  29444817 tcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctacttttggt 29444916  T
Q  177 ccctcatttcagcacgtaagcagaatctg 205  Q
    ||||| ||||| ||||| |||||||||||    
T  29444917 ccctcctttcatcacgtcagcagaatctg 29444945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 41001422 - 41001523
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaa 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| || || ||||||||||||||  || ||||||||||||||||||||| ||    
T  41001422 ttagattttgtccctgtaatttcatattcttccacttttggtccttcattccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaa 41001521  T
Q  233 aa 234  Q
    ||    
T  41001522 aa 41001523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 24837547 - 24837408
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| ||||||||||||||||||   |||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    | ||||||| |||||| ||||| || || | |||||||||    
T  24837447 ctacttttgctccctcctttcatcaagtcaacagaatctg 24837408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 18336467 - 18336604
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||  ||||||||||| | |||||||||||||||| |||||||||||||||          |||||||||||||||||||||||||||||||||    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336566  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    ||| |||||| |||||| ||||| ||| | ||||||||    
T  18336567 tccgcttttgatccctcctttcatcacatcagcagaat 18336604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 24650766 - 24650870
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  |||||| || ||||| |||| ||||||  || |||||||||||||||||||||    
T  24650766 gatttagattttgttcctgtaatttcatattcttccacttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggac 24650865  T
Q  230 caaaa 234  Q
    |||||    
T  24650866 caaaa 24650870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 41001729 - 41001610
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| | ||||||||| |||||||||||||||||| | ||||||||| |||         |||||||||||||||||| ||||||||||||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaa-gatttagattttgtccctataatttcagattcttc 41001631  T
Q  167 cacttttggtccctcatttca 187  Q
    ||||||||||||||| |||||    
T  41001630 cacttttggtccctcctttca 41001610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 22571090 - 22571204
Alignment:
Q  79 ttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggtcc 178  Q
    |||| ||||||||||||||||||||||| |||||||||||||||          ||||||||| | || ||||||||||| |||||||||||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttccacttttggtcc 22571189  T
Q  179 ctcatttcagcacgt 193  Q
    ||||||||| |||||    
T  22571190 ctcatttcaccacgt 22571204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 24651078 - 24650940
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||  |||||||||||||||||| | ||||||||| |||          || |||||||| |||||||||||| |||||||    
T  24651078 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattct 24650979  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatc 203  Q
    |||||||||| |||||| ||||| ||||| |||||||||    
T  24650978 tccacttttgatccctcctttcatcacgtcagcagaatc 24650940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 234
Target Start/End: Complemental strand, 29445185 - 29445014
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| ||||  ||||||||||| ||||||||||||||||||   ||||||||| |||         |||||||||||||||| |||||||||||||||    
T  29445185 aagggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtcc-tgtaaaaaaaaagatttagattttgtccttgtaatttcagattc 29445087  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    ||||||||||||||||| ||| || ||||| || | ||| ||  || ||| ||||||||||||||||| ||||    
T  29445086 ttccacttttggtcccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaa 29445014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 202
Target Start/End: Complemental strand, 31800018 - 31799882
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    |||| |||||| ||||||||||| | |||||||||||||||| | ||||||||| |||         |||||||||||||||| ||||||||||||||||    
T  31800018 agggaaaatacctcttttcgtccctataatattagcgaattccggttttagtcc-tgtaaaaaaaaagatttagattttgtccatgtaatttcagattct 31799920  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    ||| |||||| |||||| ||||| ||||| ||||||||    
T  31799919 tcctcttttgatccctcctttcatcacgtcagcagaat 31799882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 27159327 - 27159196
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccact 170  Q
    ||||| |||||||||||||||||||||||||||||  | ||||||||| |||          |||||||||||||||||||||||| | ||||||||| |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  171 tttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||  ||||| ||||| |||||||||||    
T  27159230 tttggtcccttctttcatcacgtcagcagaatctg 27159196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 20709591 - 20709454
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| ||||| ||||||||||| |||||||||| |||||| || |||||||||||||         |||||||||||||||| |||||||||| ||||    
T  20709591 aagggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgtaaaaaaaa-gatttagattttgtccatgtaatttcatattc 20709493  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    |||||||||| |||| || ||||| ||| | ||||||||    
T  20709492 ttccactttttgtccttcctttcatcacatcagcagaat 20709454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 994058 - 993981
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctgtata 209  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | || || | |||||||||||||    
T  994058 gatttagattttgtccctgtaattgcagattcttccacttttggtccctccttttatcatgtcaacagaatctgtata 993981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 6817432 - 6817363
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||| | ||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacatcagcagaat 6817363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 4919366 - 4919247
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| ||||||||||  || ||||||||||||||| | ||||||| |||||          ||| ||||||||||||||||||||||||||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattcttc 4919268  T
Q  167 cacttttggtccctcatttca 187  Q
     ||||||| |||||| |||||    
T  4919267 tacttttgatccctcctttca 4919247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 20959402 - 20959330
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||| |||||||||||| |||||||||||||  |||||| | || || |||||||||||    
T  20959402 atttagattttgtccctgcaatttcagattcctccacttttggtcgttcatttaaccatgttagcagaatctg 20959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 41424584 - 41424656
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctgt 206  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||| | || || |||| |||||||    
T  41424584 tttagattctgtccctgtcatttcagattcttccacttttagtccctcatttaaacatgtcagcaaaatctgt 41424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 18336638 - 18336679
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  18336638 gtccctgtaatttcagattcctccacttttggtccctcattt 18336679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 32233967 - 32234015
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||    
T  32233967 tttagattttgtccctatcatttgagattcttccacttttggtccctca 32234015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 7126113 - 7126072
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  7126113 gtccctgtaatttcaaattcctccacttttggtccctcattt 7126072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 17762464 - 17762505
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  17762464 gtccctgtaattttagattcctccacttttggtccctcattt 17762505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 24650896 - 24650855
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  24650896 gtccctgtaatttcagattcctccatttttggtccctcattt 24650855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 24837365 - 24837324
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  24837365 gtccctgtaatttcagattcctccacttttgatccctcattt 24837324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 28070532 - 28070580
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    |||||||| ||||| ||||||||||||||||||||||||  ||||||||    
T  28070532 tttagattctgtccttgtaatttcagattcttccactttgagtccctca 28070580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 28071806 - 28071759
Alignment:
Q  135 ttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    ||||||| | ||| |||||||||||||||||||||||| |||||||||    
T  28071806 ttagattatatccttgtaatttcagattcttccactttaggtccctca 28071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 14411847 - 14411889
Alignment:
Q  144 gtccctgtaatttcagatt-cttccacttttggtccctcattt 185  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  14411847 gtccctgtaatttcagattcctcccacttttggtccctcattt 14411889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 20947097 - 20947059
Alignment:
Q  149 tgtaatttcagattcttccacttttggtccctcatttca 187  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  20947097 tgtaatttcagattcctccacttttggtcactcatttca 20947059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 4919182 - 4919145
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  4919182 ctgtaatttcaaattcctccacttttggtccctcattt 4919145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 14144083 - 14144124
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| |||||||||| |||| |||||||||||||||||||||    
T  14144083 gtccatgtaatttcaaattcctccacttttggtccctcattt 14144124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 31799836 - 31799795
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| | || |||||||||||||||||||||    
T  31799836 gtccctgtaatttcaaaatcctccacttttggtccctcattt 31799795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 41001549 - 41001508
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||| |||| |||||||||||    
T  41001549 gtccctgtaatttcagattcctccatttttagtccctcattt 41001508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 20709407 - 20709367
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| ||||||||| |||||||||||    
T  20709407 tccctgtaatttcatattcctccactttttgtccctcattt 20709367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 22571278 - 22571230
Alignment:
Q  139 attttgtccctgtaatttcagattcttccacttttggtccctcatttca 187  Q
    |||| |||||| |||||||| |||| ||| |||||||||||||||||||    
T  22571278 atttggtccctctaatttcatattcatccgcttttggtccctcatttca 22571230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 26236473 - 26236300
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||  | ||||||||| ||          |||||||||||||||||||||||||||||||||    
T  26236473 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttg-gaaaaaaaagatttagattttgtccctgtaatttcagattct 26236375  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||| ||||||||||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||    
T  26236374 tccatttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 26236300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 17463475 - 17463299
Alignment:
Q  60 tataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcag 159  Q
    |||||||||||||||| |||||||| || |||||||||||||||||| | |||||||||||||         |||||||||||||||||||||||| ||     
T  17463475 tataaagggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcat 17463376  T
Q  160 attcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    ||||||||||||||| ||||||||| || || ||||||||||||||  || |||||| |||||||||||||||||||    
T  17463375 attcttccacttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaa 17463299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 19251848 - 19251675
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||||||||||||||| |||||| | |||||||||||||         |||||||||| ||||| |||||||||| |||||    
T  19251848 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattctgtccttgtaatttcatattct 19251750  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||| |||||||||||||| ||||| |||||||||||  || |||||||||||||||| ||||||||||||    
T  19251749 tccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtg 19251675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 23806330 - 23806157
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||| |||| |||||||||||||||||  | |||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23806231  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||| || ||||| |||| ||| ||  || |||||||||||||||||||||||||||||    
T  23806230 ccacttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtg 23806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 15106443 - 15106272
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||||||||  ||||||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||||||||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattctt 15106346  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||| ||||||||| || ||||| |||| ||||||  || |||||||||||||||||||| ||||||||    
T  15106345 ccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaagtg 15106272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 22263192 - 22263364
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||| ||||||||||||| ||| ||||||||||| |||||||| |||||||| || |         ||||||||||||||||||||||||||| ||||||    
T  22263192 gggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaa-gatttagattttgtccctgtaatttcatattctt 22263290  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||| ||| || ||||| |||||||||||  || |||||||||||||||||||||||||||||    
T  22263291 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 22263364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 65 - 202
Target Start/End: Original strand, 26236126 - 26236263
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||         |||||| ||||||||||||||||||||||||||    
T  26236126 agggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattct 26236225  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    | ||||||||||||||| ||||| ||||| ||||||||    
T  26236226 ttcacttttggtccctcctttcatcacgtcagcagaat 26236263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 234
Target Start/End: Original strand, 30390470 - 30390629
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||          | |||||||||||||||||||||||| |||||||||||||||||    
T  30390470 tcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccacttttggt 30390569  T
Q  177 ccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    |||||||| || |||||||||| ||||||  || || |||||||||||||||||||||||    
T  30390570 ccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaa 30390629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 26560567 - 26560727
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggt 176  Q
    ||||||||||| |||||||||| ||||||  |||||||||||||||         ||||||||||| |||||||||||||||||||||||||||||||||    
T  26560567 tcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaa--gatttagatttagtccctgtaatttcagattcttccacttttggt 26560664  T
Q  177 ccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||| ||| || ||||| |||||||||||  || |||||||||||||||||||| ||||||||    
T  26560665 cccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtg 26560727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 17850587 - 17850759
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| |         ||||||||||||||| ||||||||| ||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaa-gatttagattttgtctctgtaatttaagattctt 17850685  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||| ||||||||| || ||||| |||||||||||  || |||| || |||||||||||| ||||||||    
T  17850686 ccacttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagtg 17850759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 17850967 - 17850825
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||||||||| ||||||||||| |||||||||||||||||  | |||||||| ||||         | |||||||||||||||||||||||||||||    
T  17850967 aaagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagatt 17850868  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||||| ||||| ||||| |||| ||||||    
T  17850867 cttccacttttggtccctcttttcatcacgtcagcaaaatctg 17850825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 26135827 - 26135956
Alignment:
Q  76 atcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttgg 175  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||||||||||| ||||||||    
T  26135827 atcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttgg 26135926  T
Q  176 tccctcatttcagcacgtaagcagaatctg 205  Q
    |||||| ||||| || || | |||||||||    
T  26135927 tccctcctttcatcaagtcaacagaatctg 26135956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 13254803 - 13254641
Alignment:
Q  77 tcttttcgtccttgtaatattagcgaattctgattttagtccctgt-nnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttgg 175  Q
    ||||||||||| |||||||||||||||||| | |||||||| ||||          |||||| ||||  | |||||||||||||||||||||||||||||    
T  13254803 tcttttcgtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaatttaat-cctgtaatttcagattcttccacttttgg 13254705  T
Q  176 tccctcatttcagcacgtaagcagaatctgtat--atggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||| ||| ||||||||||| ||||  ||| |||||||||||||||||||||||||    
T  13254704 tccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtg 13254641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 20499057 - 20498950
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| | |||||||||||  || || |||||||||||||||||     
T  20499057 gatttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggat 20498958  T
Q  230 caaaagtg 237  Q
    ||||||||    
T  20498957 caaaagtg 20498950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 19251468 - 19251606
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||  | |||||||||||||         ||||||||||||||||||||||||||| |||    
T  19251468 aaagggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatatt 19251566  T
Q  163 cttccacttttggtccctcatttcagcacgtaagcagaat 202  Q
    ||||||||||||||||||| ||||| ||| | ||||||||    
T  19251567 cttccacttttggtccctcctttcatcacatcagcagaat 19251606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 39878402 - 39878307
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||  |||||||||||  |||||| |||||||||||||||||||||||||    
T  39878402 gtccctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtg 39878307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 22263573 - 22263430
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn--gatttagattttgtccctgtaatttcagat 161  Q
    |||||||||||| ||||||||| | |||||||||||||||||| | |||||||| ||||           |||| |||||||||||||||||||||| ||    
T  22263573 aagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatat 22263474  T
Q  162 tcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||| ||||| ||||| |||| ||||||    
T  22263473 tcttccacttttggtccctcctttcatcacgtcagcataatctg 22263430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 26136195 - 26136022
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagattct 164  Q
    |||||||||| |||||||||||||||||||||| ||||||  | ||||||||| |||          |||||||||||||||  |||||||||| |||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc-tgtaaaaaaaaaagatttagattttgtcattgtaatttcatattct 26136097  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||| || ||| || || |||||||||||||||||  || |||| ||||||||| ||||||||||||||    
T  26136096 tccacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagtg 26136022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 26560932 - 26560793
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt-nnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||           | ||||||||||||| | |||||||| ||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattctt 26560833  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||| ||| ||||| ||||| |||||||||||    
T  26560832 ccacttttggtctctcctttcatcacgtcagcagaatctg 26560793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 42671097 - 42670958
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| |||||| |||| |||| ||||||||||||    |||||||||||||         |||||||||| |||||||||||||||| ||| ||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattttt 42670998  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||||| ||||| |||||||||||    
T  42670997 ccacttttggtccctcctttcatcacgtcagcagaatctg 42670958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 42670717 - 42670889
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngat--ttagattttgtccctgtaatttcagattc 163  Q
    |||| ||||| ||||||||||| ||||||| |||||||||| | |||||||||||||          |   ||||||||||||| |||||||||| ||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcatattc 42670816  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaa 234  Q
    ||||||||||||||||| ||| || ||||| |||| ||| ||  || ||||||||||||||||||||||||||    
T  42670817 ttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaaaa 42670889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 23854688 - 23854797
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||| ||||| ||||||||||| |||||||||||||||||  | |||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23854787  T
Q  166 ccacttttgg 175  Q
    ||||||||||    
T  23854788 ccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 13254496 - 13254624
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||| ||| | ||||||||||||||||| || ||||| |||||||         |||||||||||||||| ||||||||||||||||    
T  13254496 agggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattct 13254595  T
Q  165 tccacttttggtccctcatttcagcacgt 193  Q
    | |||||||||| |||| ||||| |||||    
T  13254596 ttcacttttggttcctcctttcatcacgt 13254624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 34548574 - 34548714
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||| ||||||||||| ||||||||||| ||||| || |||||||||||||         |||||||||||||||| |||||||||| ||| ||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaa-gatttagattttgtccatgtaatttcatattgtt 34548672  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctgta 207  Q
    |||| ||||||| ||| ||||| ||||| || ||||||||||    
T  34548673 ccacctttggtcactcctttcatcacgtcagtagaatctgta 34548714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 15106067 - 15106194
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  |||||||||||  ||||||||||||||||  | ||||| |||||||         ||||||||||||||||||||||||| ||||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  166 ccacttttggtccctcatttcagcacgt 193  Q
    |||||||||||||||| ||||| |||||    
T  15106167 ccacttttggtccctcctttcatcacgt 15106194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 13284484 - 13284581
Alignment:
Q  142 ttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||  | |||||||||  || ||| ||||| |||||||||||||||||||    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtg 13284581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 20498746 - 20498884
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||  |||||||||||||||||  | |||||||||||||          ||||||||| |||||||||| |||||||||||    
T  20498746 agggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaat-atttagattatgtccctgta-tttcagattct 20498843  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||||||| ||| | ||||| || ||||||||    
T  20498844 tccacttttggtccctccttttatcacgtcagtagaatctg 20498884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 39878102 - 39878241
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| | |||| ||||||||||||||||||||||| | |||||||||||||          ||||||||| |||  |||||||||||||||||    
T  39878102 agggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattct 39878200  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    ||||||||||||| ||| ||||| || || |||| ||||||    
T  39878201 tccacttttggtcactcctttcatcaagtcagcaaaatctg 39878241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 17463092 - 17463230
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  ||||||||||| | |||||||||||||||| | |||||||| ||||          ||| ||||||||||||||||||||||| ||||     
T  17463092 gggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaaaatt-agattttgtccctgtaatttcaggttctc 17463190  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||||||||| || || | |||||||||    
T  17463191 ccacttttggtccctcatttcatcaagtcaacagaatctg 17463230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 23854977 - 23854905
Alignment:
Q  133 atttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctg 23854905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 23806022 - 23806089
Alignment:
Q  136 tagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatc 203  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatc 23806089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 33290427 - 33290254
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| |||||  ||||| |||| |||||||||||||||||||| ||||| |||||||          | |||||||||| || |||||||||| ||||    
T  33290427 aagggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaa--aattagattttgaccttgtaatttcatattc 33290330  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||| |||||| ||||| |  | ||||||  || ||||| | | |||||||||||||||||||    
T  33290329 ttccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaagtg 33290254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 13284716 - 13284648
Alignment:
Q  136 tagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||| | ||||||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatct 13284648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 23046706 - 23046813
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| |||||||||||||||||||| ||||||||| | |||| ||| || |          ||||||||| ||||||||||||||||||||||    
T  23046706 agggtaaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattct 23046805  T
Q  165 tccacttt 172  Q
    ||||||||    
T  23046806 tccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 44099000 - 44098894
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    |||||||||  ||||||||||| |||||||| ||||||||||| |||| || |||||          ||||||||| |||||||||||||||||||||||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattctt 44098901  T
Q  166 ccacttt 172  Q
    |||||||    
T  44098900 ccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 33290062 - 33290188
Alignment:
Q  79 ttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccacttttggtcc 178  Q
    |||| |||| ||||||||||||||||||   |||||||||||||          ||||||||| ||||| |||||||||| | || ||||||||||||||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcatactcctccacttttggtcc 33290161  T
Q  179 ctcatttcagcacgtaagcagaatctg 205  Q
    || |||| | ||||| |||||||||||    
T  33290162 cttatttaaccacgtcagcagaatctg 33290188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 21482190 - 21482142
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctca 182  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  21482190 tttagattttgtccctgtcattttagattcttccacttttagtccctca 21482142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 33290231 - 33290274
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcatttca 187  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  33290231 gtccctgtaatttcagatacctccacttttggtccctcatttca 33290274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 12419102 - 12418962
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| |||||  ||||| |||| |||||||||||||||||| | ||||||||||| |         | |||||||| ||||| || |||||| |||||    
T  12419102 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccatgaaatttccgattc 12419004  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
     ||||||||| ||||||||||| | || || |||||||||||    
T  12419003 ctccacttttagtccctcatttaaccatgtcagcagaatctg 12418962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 12431162 - 12431022
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||| |||||  ||||| |||| |||||||||||||||||| | ||||||||||| |         | |||||||| ||||| || |||||| |||||    
T  12431162 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccatgaaatttccgattc 12431064  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
     ||||||||| ||||||||||| | || || |||||||||||    
T  12431063 ctccacttttagtccctcatttaaccatgtcagcagaatctg 12431022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 15106249 - 15106290
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  15106249 gtccctgtaatttcagattcctccacttttgatccctcattt 15106290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 22263387 - 22263346
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  22263387 gtccctgtaatttcaaattcctccacttttggtccctcattt 22263346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 23806134 - 23806175
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  23806134 gtccctataatttcagattcctccacttttggtccctcattt 23806175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 26236277 - 26236318
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcattt 26236318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 23854861 - 23854821
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  23854861 tccctgtaatttcaaattcctccacttttggtccctcattt 23854821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 23855072 - 23855032
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattc 106  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattc 23855032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 44999354 - 44999394
Alignment:
Q  68 gtaaatacatcttttcgtccttgtaatattagcgaattctg 108  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  44999354 gtaaatatatcttttcgtccatgtaatattagcgaattctg 44999394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 44999481 - 44999435
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgattttagtcc 118  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||    
T  44999481 aatacctcttttcgtcat-gtaatattagcgaattctgattttagtcc 44999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 30390656 - 30390614
Alignment:
Q  143 tgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||||||||| | || ||||||||||||||||    
T  30390656 tgtccctgtaatttcagattccttcatttttggtccctcattt 30390614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 39878284 - 39878325
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  39878284 gtccctctaatttcagattactccacttttggtccctcattt 39878325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 42670915 - 42670874
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||||||| |||| |||| ||||||||||||||||    
T  42670915 gtccctgtaatttcaaattcctccatttttggtccctcattt 42670874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 19251653 - 19251693
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||||||| ||||||    
T  19251653 tccctgtaatttcatattcctccacttttggtccatcattt 19251693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 23854811 - 23854839
Alignment:
Q  209 atggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||||||||||||    
T  23854811 atggcacgtaaaatgagggaccaaaagtg 23854839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 26560749 - 26560709
Alignment:
Q  145 tccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||| |||| |||||||||| ||||||||||    
T  26560749 tccctgtaatttcaaattcctccacttttgatccctcattt 26560709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 36359111 - 36359183
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctgt 206  Q
    |||||||||||||| |||||| ||| || |||||||||||  |||||||||  | || || ||||||||||||    
T  36359111 tttagattttgtccttgtaatatcatatacttccactttttatccctcattaaaacatgtcagcagaatctgt 36359183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 4941 - 4768
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||| ||||| | ||||| |||||||         |||||||||||||||| |||||||||| |||||    
T  4941 agggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataa-gatttagattttgtccttgtaatttcatattct 4843  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||| || |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  4842 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtg 4768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 4560 - 4678
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgt-nnnnnnnnngatttagattttgtccctgtaatttcagatt 162  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||          |||||| |||||||||||||||||| |||||    
T  4560 aagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagatt 4659  T
Q  163 cttccacttttggtccctc 181  Q
    |||| ||||||||||||||    
T  4660 cttctacttttggtccctc 4678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 4745 - 4786
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccctcattt 4786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 7227 - 7403
Alignment:
Q  67 ggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttc 166  Q
    ||||||||| |||||||||||||||||||||||||||||||| | ||||| |||||         ||||||||||||||||||||||||||| |||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T
Q  167 cacttttggtccctcatttcagcacgtaagcagaatctg------tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||| ||||||||||| || |||| ||||| ||||||      || |||| ||||||||||||||||||||||||    
T  7327 cactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgagggaccaaaagtg 7403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 7581 - 7466
Alignment:
Q  63 aaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnn-gatttagattttgtccctgtaatttcagat 161  Q
    ||||||||||||| | ||||||||| |||||||||||||||||| | |||||||||||||          ||||||||||||||||||||||||||||||    
T  7581 aaagggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 7482  T
Q  162 tcttccacttttggtc 177  Q
    ||||| ||||||||||    
T  7481 tcttctacttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 3868 - 4042
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||  ||||||||||| |||||||||||||||||| | |||||||||||||         |||||||||| |||||||||||||||| |||||    
T  3868 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattct 3967  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||| |||||| ||||||||| || || |||||||||||   | |||||| ||||||||||||||||||||||    
T  3968 tccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaagtg 4042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 4249 - 4108
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| | ||||||| | ||||||||||| |||||   |||||| |||||||          ||||||||| |||   |||||||||||||||    
T  4249 aagggtaaatactttttttcgttcatgtaatattagagaatttcaattttaatccctgtaaaaaaaaatatttagattatgttgttgtaatttcagattc 4150  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    || || |||||||||||| ||||| ||||| |||||||||||    
T  4149 tttcatttttggtccctcctttcatcacgtcagcagaatctg 4108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 4061 - 4024
Alignment:
Q  148 ctgtaatttcagattcttccacttttggtccctcattt 185  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  4061 ctgtaatttcatattcctccacttttggtccctcattt 4024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 5129 - 4953
Alignment:
Q  61 ataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcaga 160  Q
    |||||||||||||||  |||||||||| |||||||||||||||||| | |||| ||||  ||          |||||||||| ||||||||||||| |||    
T  5129 ataaagggtaaatacc-cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaaaaaat-atttagatttagtccctgtaattttaga 5032  T
Q  161 ttcttccacttttggtccctcatttcagcacgtaagcagaatct--gtatatggcacgtaaaatgagggaccaaaagtg 237  Q
    |||||||||||||||||||||||| || ||||||||||||||||   || |||||||||||||||||||||||||||||    
T  5031 ttcttccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtg 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 12355 - 12221
Alignment:
Q  71 aatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattcttccact 170  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||||||||| |         |||||||||||||||||||||||||||||||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  171 tttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||| || ||||| ||||| |||||||||||    
T  12255 tttggtccatcctttcatcacgtcagcagaatctg 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 1409 - 1548
Alignment:
Q  64 aagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattc 163  Q
    |||||||||||| |||||||| ||  |||||||| |||||||  |||||||||||||||         |||||||||| |||||||||||||||||||||    
T  1409 aagggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattc 1507  T
Q  164 ttccacttttggtccctcatttcagcacgtaagcagaatct 204  Q
    |||||||||||||||||| ||||| ||||| ||||||||||    
T  1508 ttccacttttggtccctcctttcatcacgtcagcagaatct 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 1785 - 1615
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||| | ||||||||||| |||||||||| ||||||| | ||||||||||| |          | ||||||| ||||| ||||||||||||||||    
T  1785 agggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa----aattagattatgtccttgtaatttcagattct 1690  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggaccaaaagtg 237  Q
    ||||||||||||||||||  ||| ||| | |||||||||||  || |||||||||||||||||||||||||||||    
T  1689 tccacttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtg 1615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 1592 - 1633
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  1592 gtccttgtaatttcagattactccacttttggtccctcattt 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 8700 - 8538
Alignment:
Q  66 gggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattctt 165  Q
    ||||||||||  ||||| || | || ||||||||||||||| | ||||||||||| |         ||||||||||||||||||||||||| ||||||||    
T  8700 gggtaaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T
Q  166 ccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagg 226  Q
    ||||||||||||||||||| || ||||| |||||||||||  || ||| ||||||||||||||    
T  8600 ccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagg 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 8324 - 8450
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||  | |||||||||| ||         ||||||||||||||||| ||||  |||||||||    
T  8324 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccccgtaaataaaaagatttagattttgtcccagtaa--tcagattct 8421  T
Q  165 tccacttttggtccctcatttcagcacgt 193  Q
    | ||||||||||| ||| ||||| |||||    
T  8422 ttcacttttggtctctcctttcatcacgt 8450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 286 - 392
Alignment:
Q  132 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg--tatatggcacgtaaaatgagggac 229  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||||||||| || ||| |||||||||| ||  || |||| ||||||||||||||||    
T  286 gatttagattttctccccataatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggac 385  T
Q  230 caaaagt 236  Q
    |||||||    
T  386 caaaagt 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 416 - 375
Alignment:
Q  144 gtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  416 gtccctgtaatttcagattcctctacttttggtccctcattt 375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 6063 - 5941
Alignment:
Q  60 tataaagggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnnga-tttagattttgtccctgtaatttca 158  Q
    |||| ||||||||||| |||||| |||| || ||||||||||||||| |||||||||||||||          | |||||||| ||||||||||||||||    
T  6063 tatatagggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttca 5964  T
Q  159 gattcttccacttttggtccctc 181  Q
    ||||| |||||||||| ||||||    
T  5963 gattcctccacttttgatccctc 5941  T

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Target: scaffold0352; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 4666 - 4781
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||| |||||| |||| || |||||||||||||||   ||||||||||| |           |||||||| |||||||||||||||||||||     
T  4666 agggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccctataaaaaaaaaagtttagattctgtccctgtaatttcagattcc 4765  T
Q  165 tccacttttggtccct 180  Q
    ||||||||||||||||    
T  4766 tccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 16007 - 15871
Alignment:
Q  65 agggtaaatacatcttttcgtccttgtaatattagcgaattctgattttagtccctgtnnnnnnnnngatttagattttgtccctgtaatttcagattct 164  Q
    ||||||||||  ||||||||||| |||||||||||||||||| | |||||||| ||||          |   |||||||||||||||||||||| |||||    
T  16007 agggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaa----aaaaagattttgtccctgtaatttcatattct 15912  T
Q  165 tccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    | ||||||||||| ||| ||||| ||||| |||||||||||    
T  15911 ttcacttttggtctctcctttcatcacgtcagcagaatctg 15871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 27699 - 27648
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcattt 185  Q
    |||||||| |||||||||||| ||||||||||||| ||| |||| |||||||    
T  27699 tttagattatgtccctgtaatatcagattcttccaatttcggtctctcattt 27648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 210 - 139
Alignment:
Q  134 tttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcagcacgtaagcagaatctg 205  Q
    |||||||||||||||| ||||||||||||| ||||||||| || |||| ||| | |  || |||||||||||    
T  210 tttagattttgtccctataatttcagattcctccacttttagttcctcgtttaaccctgtcagcagaatctg 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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