View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18012_low_8 (Length: 295)
Name: NF18012_low_8
Description: NF18012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18012_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 13 - 277
Target Start/End: Original strand, 6440017 - 6440281
Alignment:
| Q |
13 |
aatataatagaaagagcaattggaaccaaaaatatataggatagtagtggttgtaagttctgtgtaaaaggaaataacataaattttaattcttcattta |
112 |
Q |
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| T |
6440017 |
aatataatagaaagagcaattggaaccaaaaatatataggatagtagtggttgtaagttctgtgtaaaaggaaataacataaattttaattcttcattta |
6440116 |
T |
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| Q |
113 |
gaacgatcacttccagatgatttcaggctaacgaaatatgccagaacatgtactttctaaaaaagatccaaattcatattattgctaattcatatttcac |
212 |
Q |
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| T |
6440117 |
gaacgatcacttccagatgatttcaggctaacgaaatatgccagaacatgtactttctaaaaaagatccaaattcatattattgctaattcatatttcac |
6440216 |
T |
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| Q |
213 |
tgatgtgataagatagaagcatatgttgctagattttttcttttccaccacgattaagctaggca |
277 |
Q |
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| T |
6440217 |
tgatgtgataagatagaagcatatgttgctagattttttcttttccaccacgattaagctaggca |
6440281 |
T |
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