View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18013_low_9 (Length: 540)

Name: NF18013_low_9
Description: NF18013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18013_low_9
NF18013_low_9
[»] chr8 (14 HSPs)
chr8 (11-513)||(6364190-6364691)
chr8 (207-435)||(7460584-7460812)
chr8 (184-433)||(6275645-6275894)
chr8 (291-435)||(6353596-6353740)
chr8 (293-472)||(6392094-6392274)
chr8 (178-433)||(6290391-6290646)
chr8 (197-435)||(6425192-6425430)
chr8 (164-433)||(6333053-6333322)
chr8 (293-477)||(6411258-6411442)
chr8 (183-433)||(6322505-6322755)
chr8 (291-435)||(6371300-6371444)
chr8 (291-421)||(6264927-6265057)
chr8 (294-384)||(6458262-6458352)
chr8 (299-384)||(6452174-6452259)
[»] chr5 (1 HSPs)
chr5 (290-432)||(9603035-9603177)
[»] chr2 (2 HSPs)
chr2 (297-429)||(42694394-42694526)
chr2 (297-424)||(42687136-42687263)
[»] chr3 (2 HSPs)
chr3 (294-429)||(36743886-36744021)
chr3 (299-367)||(35722304-35722372)


Alignment Details
Target: chr8 (Bit Score: 454; Significance: 0; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 11 - 513
Target Start/End: Original strand, 6364190 - 6364691
Alignment:
Q  11 cataggcagagtaaacatttgtatcaacaaaaagacttagtaaacaacatcagggataaaaacattagttgtcaagtagaatacaatttcacattttagt 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6364190 cataagcagagtaaacatttgtatcaacaaaaagacttagtaaacaacatcagggataaaaacattagttgtcaagtagaatacaatttcacattttagt 6364289  T
Q  111 accatatcacttaatttttgccagaatttcttaaaatataacatactcaagtgttaagatagaacataaagtttataacctttacgagctgctttcctgc 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  6364290 accatatcacttaatttttgccagaatttcttaaaatataacatactcaagtgttaagatagaacgtaaagtt-ataacctttacgagctgctttcctgc 6364388  T
Q  211 cggttctccctcttcgagggtaagggagggtgctagatcctccaacaacaggacgagccaaactagcgttcttgtccacatcacccaaatcattgtagac 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6364389 cggttctccctcttcgagggtaagggagggtgctagatcctccaacaacaggacgagccaaactagcgttcttgtccacatcacccaaatcattgtagac 6364488  T
Q  311 atcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtagaacactaaaggagctggt 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  6364489 atcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtagtagactaaaggagctggt 6364588  T
Q  411 gtttcacttggaaggtatgtctacaaaattgtagtcattgattgtgtcaagtttttggaaaagagaatttttagtctnnnnnnntatttaacaagttata 510  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||    
T  6364589 gtttcacttggaaggtatgtctacaaaattgtagtcattgattgtgtcaagtttttggaaaagagaatttatagtctaaaaaaatatttaacaagttata 6364688  T
Q  511 cat 513  Q
    |||    
T  6364689 cat 6364691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 207 - 435
Target Start/End: Original strand, 7460584 - 7460812
Alignment:
Q  207 ctgccggttctccctcttcgagggtaagggagggtgctagatcctccaacaacaggacgagccaaactagcgttcttgtccacatcacccaaatcattgt 306  Q
    ||||||||||| || |||||||||||||| | | | | || ||||||| |||||||||||||||| ||||| |||| |||   ||||||||| |||||||    
T  7460584 ctgccggttcttccccttcgagggtaaggcaagtttccaggtcctccagcaacaggacgagccaagctagctttctggtcgggatcacccaagtcattgt 7460683  T
Q  307 agacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtagaacactaaaggagc 406  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  7460684 agacatcataatcatatattctgtcccattccttgcgctctcccgttccatctcctcttaaagtcttcaattcttcttgtctgtagtacactaatggagc 7460783  T
Q  407 tggtgtttcacttggaaggtatgtctaca 435  Q
    ||||||| |||||||||||||||||||||    
T  7460784 tggtgttgcacttggaaggtatgtctaca 7460812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 184 - 433
Target Start/End: Original strand, 6275645 - 6275894
Alignment:
Q  184 tataacctttacgagctgctttcctgccggttctccctcttcgagggtaagggagggtgctagatcctccaacaacaggacgagccaaactagcgttctt 283  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||| | |||| | |||||||||| ||| ||||||||||| || || |||||    
T  6275645 tataacctttcttagctggtttcctgccggttctccctcttcgagggtaaggcaaggtgttggatcctccaataacgggacgagccaagcttgctttctt 6275744  T
Q  284 gtccacatcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttct 383  Q
    |||   |||||||| ||||||||||||||| || ||||| || ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||    
T  6275745 gtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttct 6275844  T
Q  384 tgtctgtagaacactaaaggagctggtgtttcacttggaaggtatgtcta 433  Q
    ||||| ||| | ||||| |||| |||||||||||||||||| ||||||||    
T  6275845 tgtctatagtagactaatggaggtggtgtttcacttggaagatatgtcta 6275894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 6353596 - 6353740
Alignment:
Q  291 tcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgt 390  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6353596 tcacccaaatcattgtagacatcgtaatcatatattctttcccattccttgcgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgt 6353695  T
Q  391 agaacactaaaggagctggtgtttcacttggaaggtatgtctaca 435  Q
    || ||||||| ||||| ||||||||||||||||||||||||||||    
T  6353696 agtacactaatggagccggtgtttcacttggaaggtatgtctaca 6353740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 293 - 472
Target Start/End: Original strand, 6392094 - 6392274
Alignment:
Q  293 acccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtag 392  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6392094 acccaaatcattgtagacatcataatcatatattctgtcccattccttacgctctccagttccatctcctcttaaagtattcaattcttcttgtctgtag 6392193  T
Q  393 aacactaaaggagctggtgtttcacttggaaggtatgtctacaaaattgtagtcattgattg-tgtcaagtttttggaaaa 472  Q
     ||| ||| |||||||||||||| ||| ||||||||| |||||||||| ||  |||||  || ||||||||||||| ||||    
T  6392194 tacagtaatggagctggtgtttcccttagaaggtatgcctacaaaattttaaccattgggtgctgtcaagtttttgaaaaa 6392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 178 - 433
Target Start/End: Original strand, 6290391 - 6290646
Alignment:
Q  178 aaagtttataacctttacgagctgctttcctgccggttctccctcttcgagggtaagggagggtgctagatcctccaacaacaggacgagccaaactagc 277  Q
    ||||||||||||||||   ||||| || |||||||||||| || ||||||||||||||||   |||| ||||| |||| ||   |||| |||||   ||     
T  6290391 aaagtttataacctttcttagctggttccctgccggttcttccccttcgagggtaagggaaattgctcgatcccccaagaatttgacgcgccaattgagg 6290490  T
Q  278 gttcttgtccacatcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaat 377  Q
     |||  |||    ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  6290491 tttcgagtcaggctcacctaaatcattgtagacatcgtaatcatatattctttcccattccttgcgctctcctgttccatctcctcttaaagtcttcaat 6290590  T
Q  378 tcttcttgtctgtagaacactaaaggagctggtgtttcacttggaaggtatgtcta 433  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  6290591 tcttcttgtctatagtacactaatggagctggtgtttcacttggaaggtatgtcta 6290646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 197 - 435
Target Start/End: Original strand, 6425192 - 6425430
Alignment:
Q  197 agctgctttcctgccggttctccctcttcgagggtaagggagggtgctagatcctccaacaacaggacgagccaaactagcgttcttgtccacatcaccc 296  Q
    ||||| ||| ||||| |||||||| |||||||||||||| | |||||| |||||||||| ||| |||||| ||||  |||  |||  |||    ||||||    
T  6425192 agctggttttctgcctgttctcccccttcgagggtaaggcaaggtgctcgatcctccaagaactggacgacccaaggtaggtttcgagtcaggctcaccc 6425291  T
Q  297 aaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtagaaca 396  Q
    ||||||||||||||||| |||||||| || |||||||||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||| ||| |||    
T  6425292 aaatcattgtagacatcgtaatcatagatcctttcccattccttgcgctctccttttccatctcctcttaaagtcttcaactcttcttgtctatagtaca 6425391  T
Q  397 ctaaaggagctggtgtttcacttggaaggtatgtctaca 435  Q
    | || ||||| ||||||||||||||||||||||||||||    
T  6425392 ccaatggagccggtgtttcacttggaaggtatgtctaca 6425430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 164 - 433
Target Start/End: Original strand, 6333053 - 6333322
Alignment:
Q  164 ttaagatagaacataaagtttataacctttacgagctgctttcctgccggttctccctcttcgagggtaagggagggtgctagatcctccaacaacagga 263  Q
    |||||||||| |||||||||||| ||||||   |||   |||||||||||||||||| |||||||||||||| | | |  | |||||||||||||| |||    
T  6333053 ttaagatagagcataaagtttatcaccttttttagcatgtttcctgccggttctcccccttcgagggtaaggcaagttattggatcctccaacaacggga 6333152  T
Q  264 cgagccaaactagcgttcttgtccacatcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctc 363  Q
    |||||||| ||  | ||||||||   ||||||||| |||||||| ||||| || ||||| || || ||| |||| || ||||| || |||||||||||||    
T  6333153 cgagccaagctttctttcttgtcaggatcacccaagtcattgtaaacatcgtagtcatagatcctatccgattctttgcgctcacccgttccatctcctc 6333252  T
Q  364 ttaaagtcttcaattcttcttgtctgtagaacactaaaggagctggtgtttcacttggaaggtatgtcta 433  Q
    ||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||| |||||    
T  6333253 ttaaagtcttcaattcttcttgtctgtagtagactaatggagctggtgtttcgcttggaaggtacgtcta 6333322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 293 - 477
Target Start/End: Original strand, 6411258 - 6411442
Alignment:
Q  293 acccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtag 392  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  6411258 acccaaatcattgtagacatcataatcatatattctgtcccataccttacgctctccagttccatctcctcttaaagtcttcaattcttctttgatgtag 6411357  T
Q  393 aacactaaaggagctggtgtttcacttggaaggtatgtctacaaaattgtagtcattgattgtgtcaagtttttggaaaagagaa 477  Q
     ||||||| ||   ||||| || |||||||||||||| ||||| |||| ||  ||||| |  ||||||||||||| |||||||||    
T  6411358 tacactaatggttgtggtgcttgacttggaaggtatgcctacataattttaaccattggtgctgtcaagtttttgaaaaagagaa 6411442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 183 - 433
Target Start/End: Original strand, 6322505 - 6322755
Alignment:
Q  183 ttataacctttacgagctgctttcctgccggttctccctcttcgagggtaagggagggtgctagatcctccaacaacaggacgagccaaactagcgttct 282  Q
    |||||||||||   ||||| ||||||||||||||| || |||||||||||||| | ||||   |||||||||| ||| |||||||||||    |||| ||    
T  6322505 ttataaccttttttagctggtttcctgccggttctgccccttcgagggtaaggcaaggtgtcggatcctccaataacgggacgagccaagtgtgcgtact 6322604  T
Q  283 tgtccacatcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttc 382  Q
    ||||   ||||||||| |||||||| ||||| || ||||| ||||| ||   |||||| ||||  || ||||||||||||||||||||||||||||||||    
T  6322605 tgtcaggatcacccaagtcattgtaaacatcgtagtcatagattctatcgtgttccttgcgctgacccgttccatctcctcttaaagtcttcaattcttc 6322704  T
Q  383 ttgtctgtagaacactaaaggagctggtgtttcacttggaaggtatgtcta 433  Q
    || ||| ||| | ||||| ||||||||||||||||||||||||||||||||    
T  6322705 ttctctatagtagactaatggagctggtgtttcacttggaaggtatgtcta 6322755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 6371300 - 6371444
Alignment:
Q  291 tcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgt 390  Q
    ||||||||||||||||||||||| || ||||| || || |||||||| || ||||| || |||||||||||||||||||||||||| |||||||||||||    
T  6371300 tcacccaaatcattgtagacatcgtagtcatagatcctatcccattctttgcgctcacccgttccatctcctcttaaagtcttcaactcttcttgtctgt 6371399  T
Q  391 agaacactaaaggagctggtgtttcacttggaaggtatgtctaca 435  Q
    || | ||||| |||||||||||||||||| |||||||||||||||    
T  6371400 agtagactaatggagctggtgtttcacttagaaggtatgtctaca 6371444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 291 - 421
Target Start/End: Original strand, 6264927 - 6265057
Alignment:
Q  291 tcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgt 390  Q
    ||||||||||||||||| |||||||||||||| | ||| |||||||| || ||||| || |||||||||||||||||||||||||| |||  |||||| |    
T  6264927 tcacccaaatcattgtaaacatcataatcataaactctgtcccattctttgcgctcccccgttccatctcctcttaaagtcttcaactctaattgtctat 6265026  T
Q  391 agaacactaaaggagctggtgtttcacttgg 421  Q
    || | || |  ||||| ||||||||||||||    
T  6265027 agtagacaagtggagcaggtgtttcacttgg 6265057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 384
Target Start/End: Original strand, 6458262 - 6458352
Alignment:
Q  294 cccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttctt 384  Q
    ||||||||||| || | |||||||||||| | ||| |||  ||| || ||||||||||||||||||||||||| ||||| ||| |||||||    
T  6458262 cccaaatcattataaatatcataatcataaactctatccgcttctttgcgctctccagttccatctcctcttagagtctgcaactcttctt 6458352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 299 - 384
Target Start/End: Original strand, 6452174 - 6452259
Alignment:
Q  299 atcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttctt 384  Q
    |||||| || ||||||||||| ||||| || |||||||| || || ||||| |||||||||||||||| | ||| ||| |||||||    
T  6452174 atcattataaacatcataatcgtatatcctatcccattctttgcgttctccggttccatctcctcttagattctgcaactcttctt 6452259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 290 - 432
Target Start/End: Complemental strand, 9603177 - 9603035
Alignment:
Q  290 atcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctg 389  Q
    |||||| | |||||||||||||||||||||||| | |||||||||||| || || | |||||| ||||||||||||| | | | ||||||||||||||||    
T  9603177 atcaccaagatcattgtagacatcataatcataaactctttcccattcttttcgttgtccagtaccatctcctcttagattttgcaattcttcttgtctg 9603078  T
Q  390 tagaacactaaaggagctggtgtttcacttggaaggtatgtct 432  Q
    ||| | ||||| ||||||||||||| ||||||||| |||||||    
T  9603077 tagtagactaatggagctggtgtttgacttggaagatatgtct 9603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 42694394 - 42694526
Alignment:
Q  297 aaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtagaaca 396  Q
    |||||||||||||||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||| | ||||||||||||| ||| ||    |    
T  42694394 aaatcattgtagacatcataatcatagattctttcccattctttgcgttctcctgttccatctcctcttaaattgttcaattcttcttctctataatgga 42694493  T
Q  397 ctaaaggagctggtgtttcacttggaaggtatg 429  Q
    |||| ||||| ||||||||||| ||||| ||||    
T  42694494 ctaatggagccggtgtttcactaggaagatatg 42694526  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 424
Target Start/End: Complemental strand, 42687263 - 42687136
Alignment:
Q  297 aaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtagaaca 396  Q
    ||||||||||||||||| ||||| || || |||||   |  ||| |||||||| ||||||||||| |||||| | | ||||||||||| ||| ||    |    
T  42687263 aaatcattgtagacatcgtaatcgtagatcctttcatgtaacttgcgctctcctgttccatctccccttaaattttgcaattcttcttctctatacttga 42687164  T
Q  397 ctaaaggagctggtgtttcacttggaag 424  Q
    |||  |||| ||||||||||||||||||    
T  42687163 ctagtggagatggtgtttcacttggaag 42687136  T

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Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 429
Target Start/End: Complemental strand, 36744021 - 36743886
Alignment:
Q  294 cccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctgtaga 393  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||| ||||| | | ||||||||||| |||||||| | ||||||| | |||||||||     
T  36744021 cccaaatcattgtaaacatcataatcatagattctgtcccattcctcacgctttgctgttccatctccccttaaagtatccaattctacatgtctgtagt 36743922  T
Q  394 acactaaaggagctggtgtttcacttggaaggtatg 429  Q
      ||||  ||||||||  |||||  |||||||||||    
T  36743921 taactagtggagctggcatttcatgtggaaggtatg 36743886  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 35722372 - 35722304
Alignment:
Q  299 atcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaa 367  Q
    |||||||||||||||||||||||| ||||| ||  ||| ||||||||||||   ||||| |||||||||    
T  35722372 atcattgtagacatcataatcatagattctgtctgatttcttacgctctccttctccatttcctcttaa 35722304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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