View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18014_high_8 (Length: 320)

Name: NF18014_high_8
Description: NF18014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18014_high_8
NF18014_high_8
[»] chr2 (20 HSPs)
chr2 (16-258)||(6647755-6647997)
chr2 (256-309)||(11229207-11229260)
chr2 (264-309)||(43725337-43725382)
chr2 (259-297)||(5067531-5067569)
chr2 (257-298)||(5455340-5455381)
chr2 (257-298)||(34138923-34138964)
chr2 (258-293)||(10749567-10749602)
chr2 (258-309)||(14714118-14714169)
chr2 (257-296)||(45693354-45693393)
chr2 (259-309)||(13711193-13711243)
chr2 (259-309)||(36133106-36133156)
chr2 (265-306)||(8848719-8848760)
chr2 (265-306)||(27490754-27490795)
chr2 (267-308)||(30831764-30831805)
chr2 (265-309)||(45515494-45515539)
chr2 (257-309)||(12600180-12600232)
chr2 (257-297)||(15019030-15019070)
chr2 (259-295)||(19913931-19913967)
chr2 (259-299)||(26321586-26321626)
chr2 (258-294)||(28014091-28014127)
[»] chr7 (22 HSPs)
chr7 (257-309)||(25887715-25887767)
chr7 (259-309)||(155870-155920)
chr7 (260-309)||(47193059-47193108)
chr7 (259-309)||(45607156-45607206)
chr7 (258-309)||(10591284-10591335)
chr7 (257-297)||(21858891-21858931)
chr7 (257-306)||(12142019-12142068)
chr7 (257-309)||(40717125-40717178)
chr7 (257-309)||(40842538-40842591)
chr7 (258-309)||(2790309-2790361)
chr7 (259-309)||(7807186-7807237)
chr7 (259-294)||(29355479-29355514)
chr7 (259-294)||(30982255-30982290)
chr7 (261-299)||(32154441-32154479)
chr7 (260-309)||(45432075-45432125)
chr7 (265-306)||(13152599-13152640)
chr7 (258-299)||(19426722-19426763)
chr7 (259-296)||(43657147-43657184)
chr7 (262-299)||(47424877-47424914)
chr7 (260-312)||(7990202-7990254)
chr7 (259-299)||(27778204-27778244)
chr7 (259-291)||(32171024-32171056)
[»] chr5 (26 HSPs)
chr5 (259-309)||(11767879-11767929)
chr5 (257-306)||(1774172-1774221)
chr5 (251-307)||(24431499-24431555)
chr5 (259-309)||(19127256-19127306)
chr5 (258-309)||(10232631-10232683)
chr5 (259-309)||(14323857-14323907)
chr5 (259-309)||(20719904-20719954)
chr5 (260-309)||(125224-125273)
chr5 (257-309)||(12718267-12718319)
chr5 (257-309)||(31284281-31284333)
chr5 (258-297)||(3141640-3141679)
chr5 (258-309)||(39595406-39595457)
chr5 (259-309)||(2117529-2117579)
chr5 (259-309)||(9403645-9403695)
chr5 (259-309)||(11306828-11306878)
chr5 (257-299)||(40223672-40223714)
chr5 (265-306)||(1274364-1274405)
chr5 (257-309)||(12661833-12661886)
chr5 (265-306)||(35634860-35634901)
chr5 (259-296)||(40566105-40566142)
chr5 (259-299)||(6515328-6515368)
chr5 (259-291)||(8897532-8897564)
chr5 (257-309)||(12779493-12779545)
chr5 (258-309)||(16202852-16202904)
chr5 (265-297)||(18660765-18660797)
chr5 (259-299)||(21749501-21749541)
[»] chr3 (24 HSPs)
chr3 (259-309)||(51672995-51673045)
chr3 (259-309)||(7293988-7294038)
chr3 (259-309)||(20380778-20380828)
chr3 (259-299)||(51464155-51464195)
chr3 (259-309)||(6126586-6126637)
chr3 (259-309)||(31997934-31997985)
chr3 (251-309)||(29706035-29706093)
chr3 (259-299)||(43169643-43169683)
chr3 (259-294)||(36298566-36298601)
chr3 (258-297)||(41957657-41957696)
chr3 (259-309)||(44365180-44365231)
chr3 (259-309)||(46003838-46003889)
chr3 (259-309)||(51650488-51650539)
chr3 (259-297)||(7231895-7231933)
chr3 (259-297)||(20893131-20893169)
chr3 (257-299)||(31249208-31249250)
chr3 (259-309)||(41111961-41112011)
chr3 (259-296)||(20162584-20162621)
chr3 (260-309)||(28269938-28269987)
chr3 (257-309)||(35272159-35272212)
chr3 (259-299)||(108572-108612)
chr3 (259-299)||(5399058-5399098)
chr3 (257-309)||(19418047-19418099)
chr3 (257-297)||(42475864-42475904)
[»] chr1 (24 HSPs)
chr1 (259-309)||(30631734-30631784)
chr1 (260-309)||(35846209-35846258)
chr1 (266-309)||(20288235-20288278)
chr1 (258-309)||(40610361-40610412)
chr1 (259-297)||(28716287-28716325)
chr1 (258-299)||(4638067-4638108)
chr1 (260-297)||(51703002-51703039)
chr1 (254-306)||(31290092-31290144)
chr1 (259-299)||(48872840-48872880)
chr1 (259-299)||(49425878-49425918)
chr1 (259-309)||(46948111-46948161)
chr1 (259-309)||(51571558-51571608)
chr1 (258-299)||(7503608-7503649)
chr1 (258-299)||(45272045-45272086)
chr1 (259-299)||(5304719-5304759)
chr1 (257-309)||(7645441-7645493)
chr1 (257-285)||(9445261-9445289)
chr1 (259-299)||(15061988-15062028)
chr1 (265-297)||(15083083-15083115)
chr1 (265-312)||(35529397-35529445)
chr1 (258-306)||(36690460-36690508)
chr1 (258-306)||(36706561-36706609)
chr1 (255-291)||(37516061-37516097)
chr1 (259-294)||(48325668-48325704)
[»] chr6 (10 HSPs)
chr6 (260-309)||(24752363-24752412)
chr6 (259-309)||(26378274-26378324)
chr6 (257-309)||(33720143-33720195)
chr6 (263-311)||(9954678-9954727)
chr6 (259-294)||(25554380-25554415)
chr6 (259-297)||(30733153-30733191)
chr6 (259-309)||(34021061-34021111)
chr6 (259-294)||(11785504-11785540)
chr6 (259-299)||(28548909-28548949)
chr6 (257-309)||(32853031-32853083)
[»] chr8 (21 HSPs)
chr8 (263-306)||(24946134-24946177)
chr8 (260-303)||(7325852-7325895)
chr8 (259-309)||(11223748-11223798)
chr8 (254-299)||(30925538-30925583)
chr8 (258-299)||(21648818-21648859)
chr8 (259-299)||(14029131-14029171)
chr8 (259-299)||(45101538-45101578)
chr8 (259-309)||(32175087-32175138)
chr8 (259-309)||(34474082-34474133)
chr8 (262-309)||(38128418-38128465)
chr8 (259-309)||(42543369-42543420)
chr8 (263-297)||(9963830-9963864)
chr8 (259-309)||(23258164-23258214)
chr8 (258-299)||(3650256-3650297)
chr8 (257-309)||(38779151-38779204)
chr8 (257-306)||(40102158-40102207)
chr8 (259-296)||(40413252-40413289)
chr8 (265-306)||(43397787-43397828)
chr8 (259-308)||(43403917-43403966)
chr8 (258-309)||(37101573-37101625)
chr8 (259-299)||(39719130-39719170)
[»] chr4 (24 HSPs)
chr4 (258-309)||(40409054-40409105)
chr4 (258-309)||(15596528-15596579)
chr4 (259-309)||(1033280-1033330)
chr4 (259-309)||(31240780-31240831)
chr4 (259-309)||(36792464-36792515)
chr4 (257-309)||(6953274-6953327)
chr4 (257-297)||(5234358-5234398)
chr4 (259-295)||(11063978-11064014)
chr4 (259-299)||(22257085-22257125)
chr4 (257-309)||(28481299-28481351)
chr4 (257-309)||(28482174-28482226)
chr4 (259-299)||(39241191-39241231)
chr4 (257-296)||(1580169-1580208)
chr4 (260-299)||(9567580-9567619)
chr4 (258-309)||(28480426-28480477)
chr4 (259-309)||(10994042-10994092)
chr4 (259-297)||(31275290-31275328)
chr4 (257-294)||(38160659-38160697)
chr4 (259-309)||(42915108-42915158)
chr4 (263-309)||(51389448-51389494)
chr4 (257-306)||(16004214-16004263)
chr4 (265-297)||(45082987-45083019)
chr4 (259-299)||(48099952-48099992)
chr4 (259-299)||(51039006-51039046)
[»] scaffold0508 (1 HSPs)
scaffold0508 (259-303)||(11425-11469)
[»] scaffold0060 (1 HSPs)
scaffold0060 (259-298)||(6960-6999)
[»] scaffold0018 (1 HSPs)
scaffold0018 (259-296)||(36147-36184)


Alignment Details
Target: chr2 (Bit Score: 243; Significance: 1e-135; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 16 - 258
Target Start/End: Original strand, 6647755 - 6647997
Alignment:
Q  16 tgagtttcctttctcagcaaggacaccaatagcccaggcagcaccattaccagagaagagcaaagctaccattattgcgtcaagtagagtgaccaatgtc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6647755 tgagtttcctttctcagcaaggacaccaatagcccaggcagcaccattaccagagaagagcaaagctaccattattgcgtcaagtagagtgaccaatgtc 6647854  T
Q  116 accaacaatttgcttttgtgtccatttgcaagagcaattacgaaagacaaggttgcatatgcgaatgctataaaatttgccaccacaaaatacctaatac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6647855 accaacaatttgcttttgtgtccatttgcaagagcaattacgaaagacaaggttgcatatgcgaatgctataaaatttgccaccacaaaatacctaatac 6647954  T
Q  216 atgaaaaacaaattattgagtttttcgtaggaaacaaaatcat 258  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6647955 atgaaaaacaaattattgagtttttcgtaggaaacaaaatcat 6647997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 11229207 - 11229260
Alignment:
Q  256 catgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11229207 catgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 11229260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 43725382 - 43725337
Alignment:
Q  264 gtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43725382 gtgatatttgaacaaccattttagacaacttttggtacaacttctt 43725337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 5067531 - 5067569
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  5067531 gagtagtgatatttgaacaatcattttagacaacttttg 5067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 5455340 - 5455381
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttgg 298  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  5455340 atgagtagtaatatttgaacaaccattttatacaacttttgg 5455381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 34138923 - 34138964
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttgg 298  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  34138923 atgagtagtgatatttgaacaaccatttcatacaacttttgg 34138964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 10749567 - 10749602
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaact 293  Q
    |||||||||||||||||||||||||||| |||||||    
T  10749567 tgagtagtgatatttgaacaaccatttttgacaact 10749602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 14714169 - 14714118
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||| |||||| |||||| |||||  ||||||||||    
T  14714169 tgagtagtgatatttgaacatccatttgagacaatttttgtgacaacttctt 14714118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 45693354 - 45693393
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaactttt 296  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  45693354 atgagtagtgatatttaaacaaccatttgagacaactttt 45693393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 13711243 - 13711193
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||| |||||  ||||||||||  ||||||||||    
T  13711243 gagtagtgatatttgaacaactattttgtacaacttttgtgacaacttctt 13711193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 36133156 - 36133106
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||| |||| | ||||||||||  ||||||||||    
T  36133156 gagtagtgatatttgaacaactatttcatacaacttttgtgacaacttctt 36133106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 8848760 - 8848719
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||||||||||||||| |||||||||||  |||||||    
T  8848760 tgatatttgaacaaccatttttgacaacttttgtgacaactt 8848719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 27490795 - 27490754
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||||||||||||||| |||||||||||  |||||||    
T  27490795 tgatatttgaacaaccatttttgacaacttttgtgacaactt 27490754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 30831764 - 30831805
Alignment:
Q  267 atatttgaacaaccattttagacaacttttggtacaacttct 308  Q
    ||||||||||||||||||| |||||||||||  |||||||||    
T  30831764 atatttgaacaaccatttttgacaacttttgtcacaacttct 30831805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 45515494 - 45515539
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||    
T  45515494 tgatatttgaacaaccatttcatacaacttttggtgacaacttctt 45515539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 12600232 - 12600180
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||| |||||||||||||||||| |||| | ||||||||||  ||||||||||    
T  12600232 atgaatagtgatatttgaacaactatttcatacaacttttgtgacaacttctt 12600180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 15019030 - 15019070
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    ||||| |||||||||||||||||||||| || |||||||||    
T  15019030 atgaggagtgatatttgaacaaccatttgaggcaacttttg 15019070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 19913967 - 19913931
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttt 295  Q
    |||||||||||||||||||||||||| | ||||||||    
T  19913967 gagtagtgatatttgaacaaccatttcatacaacttt 19913931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 26321586 - 26321626
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||| ||||| | ||||||||||||    
T  26321586 gagtagtgatatttgaacaatcatttcatacaacttttggt 26321626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 28014127 - 28014091
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaactt 294  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  28014127 tgagtagtgatattttaacaaccatttaagacaactt 28014091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 25887767 - 25887715
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25887767 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 25887715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 155870 - 155920
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  155870 gagtagtgatatttgaacaaccattttagacaacttttgatacaacttctt 155920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 47193108 - 47193059
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47193108 agtagtgatatttgaacaaccattttagataacttttggtacaacttctt 47193059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 45607206 - 45607156
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  45607206 gagtagtgatatttgaacaactattttagataacttttggtacaacttctt 45607156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 10591335 - 10591284
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  10591335 tgagtagtgatatttgaacaaccatttgagacaacttttgtgacaacttctt 10591284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 21858931 - 21858891
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  21858931 atgagtagtgatatttgaacaaccattttaaacaacttttg 21858891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 12142068 - 12142019
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    |||||||||||||||||||||||||||| | ||||||||||  |||||||    
T  12142068 atgagtagtgatatttgaacaaccatttgatacaacttttgtgacaactt 12142019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 40717125 - 40717178
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||||||||||||||||||||||||| | ||||||||| || ||||||||||    
T  40717125 atgagtagtgatatttgaacaaccatttcatacaactttttgtgacaacttctt 40717178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 40842591 - 40842538
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||||| |||||||||||||||||||| | |||||||||||| ||||||||||    
T  40842591 atgagtaatgatatttgaacaaccatttcatacaacttttggtgacaacttctt 40842538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 2790361 - 2790309
Alignment:
Q  258 tgagtagtgatatttgaacaac-cattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||| ||||||||||||||| ||  ||||||||||    
T  2790361 tgagtagtgatatttgaacaactcattttagacaacttatgtgacaacttctt 2790309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 7807237 - 7807186
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||||||||||||||||||||||| | |||||||||| | ||||||||||    
T  7807237 gagtagtgatatttgaacaaccatttcatacaacttttgatgacaacttctt 7807186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 294
Target Start/End: Complemental strand, 29355514 - 29355479
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactt 294  Q
    |||||||||||||||||||||||||| |||||||||    
T  29355514 gagtagtgatatttgaacaaccatttaagacaactt 29355479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 294
Target Start/End: Original strand, 30982255 - 30982290
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactt 294  Q
    ||||||||||||||||||||||||||| ||||||||    
T  30982255 gagtagtgatatttgaacaaccatttttgacaactt 30982290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 32154441 - 32154479
Alignment:
Q  261 gtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  32154441 gtagtgatatttgaacaaccatttcatacaacttttggt 32154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 45432125 - 45432075
Alignment:
Q  260 agtagtgatatttgaacaac-cattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||    
T  45432125 agtagtgatatttgaacaactcattttagacaacttatgtgacaacttctt 45432075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 13152599 - 13152640
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||||||||||||||| |||||||||||  |||||||    
T  13152599 tgatatttgaacaaccatttttgacaacttttgtgacaactt 13152640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 19426763 - 19426722
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  19426763 tgagaagtgatatttgaacaaccatttcatacaacttttggt 19426722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 43657184 - 43657147
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactttt 296  Q
    |||||||||||||||||||||||||| | |||||||||    
T  43657184 gagtagtgatatttgaacaaccatttcatacaactttt 43657147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 47424877 - 47424914
Alignment:
Q  262 tagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  47424877 tagtgatatttgaacaaccatttcatacaacttttggt 47424914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 7990254 - 7990202
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggtacaacttcttctc 312  Q
    ||||||||||||||||||  ||||| |||||||| |||  |||||||||||||    
T  7990254 agtagtgatatttgaacattcatttgagacaactgttgtgacaacttcttctc 7990202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 27778244 - 27778204
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  27778244 gagtagtgatatttgaacaaccatttcatataacttttggt 27778204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 32171024 - 32171056
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaa 291  Q
    |||||||||||||||||||||||||| ||||||    
T  32171024 gagtagtgatatttgaacaaccatttgagacaa 32171056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 11767879 - 11767929
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11767879 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 11767929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 1774172 - 1774221
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1774172 atgagtagtgatatttgaacaactattttagacaatttttggtacaactt 1774221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 24431499 - 24431555
Alignment:
Q  251 aaaatcatgagtagtgatatttgaacaaccattttagacaacttttggtacaacttc 307  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||  ||||||||    
T  24431499 aaaatcatgagtagtgatatttgaacaaccatttgagacaactattgtgacaacttc 24431555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 19127306 - 19127256
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  19127306 gagtagtgatatttgaacaaccattttaaacaacttttgcgacaacttctt 19127256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 10232683 - 10232631
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  10232683 tgagtagtgatatttgaacaactattttatacaacttttggtgacaacttctt 10232631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 14323857 - 14323907
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  14323857 gagtagtgatatttaaacaaccttttgagataacttttggtacaacttctt 14323907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 20719904 - 20719954
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||||    
T  20719904 gagtagtgatatttgaacatccatttgagacaacttttgtgacaacttctt 20719954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 125273 - 125224
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||| | ||||||||||  ||||||||||    
T  125273 agtagtgatatttgaacaaccatttgatacaacttttgcgacaacttctt 125224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 12718267 - 12718319
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||||  |||| |||||  ||||||||||    
T  12718267 atgagtagtgatatttgaacaaccattttcaacaatttttgtgacaacttctt 12718319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 31284281 - 31284333
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||| |||||||||||||||||||||| | ||||||||||  ||||||||||    
T  31284281 atgagcagtgatatttgaacaaccatttcatacaacttttgcgacaacttctt 31284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 3141679 - 3141640
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  3141679 tgagtagtgatatttgaacaaccatttcatacaacttttg 3141640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 39595457 - 39595406
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||| |||||||||||||||||||| | ||||||||||  ||||||||||    
T  39595457 tgagtaatgatatttgaacaaccatttgatacaacttttgtgacaacttctt 39595406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 2117529 - 2117579
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||| |||| | ||||||||||  ||||||||||    
T  2117529 gagtagtgatatttgaacaactatttgatacaacttttgtgacaacttctt 2117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 9403695 - 9403645
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||| ||||||||||| | ||||||||||  ||||||||||    
T  9403695 gagtagtgatatttaaacaaccatttgatacaacttttgtgacaacttctt 9403645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 11306878 - 11306828
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||| |||| | ||||||||||  ||||||||||    
T  11306878 gagtagtgatatttgaacaactatttgatacaacttttgagacaacttctt 11306828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 40223672 - 40223714
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||||| | |||| |||||||    
T  40223672 atgagtagtgatatttgaacaaccatttcatacaatttttggt 40223714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 1274364 - 1274405
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||||||||||||||| |||||||||||  |||||||    
T  1274364 tgatatttgaacaaccatttttgacaacttttgtgacaactt 1274405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 12661833 - 12661886
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||| |||||||||||||||| |||| | |||||||||||| ||||||||||    
T  12661833 atgagtggtgatatttgaacaactatttcatacaacttttggtgacaacttctt 12661886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 35634901 - 35634860
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    |||||||||||||| |||||| ||||||||||| ||||||||    
T  35634901 tgatatttgaacaatcatttttgacaacttttgttacaactt 35634860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 40566105 - 40566142
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactttt 296  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  40566105 gagtagtgatatttgaacatccatttgagacaactttt 40566142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 6515328 - 6515368
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | |||||| |||||    
T  6515328 gagtagtgatatttgaacaaccatttcatacaactgttggt 6515368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 291
Target Start/End: Complemental strand, 8897564 - 8897532
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaa 291  Q
    ||||||||||||||||||||||||||| |||||    
T  8897564 gagtagtgatatttgaacaaccatttttgacaa 8897532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 12779493 - 12779545
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||| |||||||||  |||| |||||  ||||||||||    
T  12779493 atgagtagtgatatttgaataaccattttcaacaatttttgtgacaacttctt 12779545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 16202904 - 16202852
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||||||||||||||||||| ||||| | ||||||||| || ||||||||||    
T  16202904 tgagtagtgatatttgaacaatcatttcatacaacttttagtgacaacttctt 16202852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 18660765 - 18660797
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  18660765 tgatatttgaacaaccatttttgacaacttttg 18660797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 21749541 - 21749501
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||||| | || |||||||    
T  21749541 gagtagtgatatttgaacaaccattttatataatttttggt 21749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 51673045 - 51672995
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51673045 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 51672995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 7293988 - 7294038
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7293988 gagtagtgatatttgaacaaccattttagacaacttttgatacaacttctt 7294038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 20380778 - 20380828
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  20380778 gagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttctt 20380828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 51464155 - 51464195
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  51464155 gagtagtgatatttgaacaaccattttatacaacttttggt 51464195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 6126637 - 6126586
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttgg-tacaacttctt 309  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  6126637 gagtagtgatatttgaacaaccatttcatacaacttttggttacaacttctt 6126586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 31997985 - 31997934
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  31997985 gagtagtgatatttgaacaaccatttgagacaacttttgatgacaacttctt 31997934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29706093 - 29706035
Alignment:
Q  251 aaaatcatgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||| |||||||||||||||||||||||| |||| | ||||||||||  ||||||||||    
T  29706093 aaaaacatgagtagtgatatttgaacaactatttgatacaacttttgtgacaacttctt 29706035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 43169643 - 43169683
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  43169643 gagtagtgatatttgaacaaccatttcatacaacttttggt 43169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 294
Target Start/End: Complemental strand, 36298601 - 36298566
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactt 294  Q
    |||||||||||||||||||||||||||| |||||||    
T  36298601 gagtagtgatatttgaacaaccattttaaacaactt 36298566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 41957696 - 41957657
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  41957696 tgagtagtgatatttaaacaaccattttaaacaacttttg 41957657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 44365180 - 44365231
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||| ||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  44365180 gagtggtgatatttgaacaaccattttatacaatttttggtgacaacttctt 44365231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 46003889 - 46003838
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||| |||||||||||||||||||| | |||||||||||| ||||||||||    
T  46003889 gagtaatgatatttgaacaaccatttcatacaacttttggtgacaacttctt 46003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 51650539 - 51650488
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||| ||||||||||||||||||||| | |||||||||||| ||||||||||    
T  51650539 gagtggtgatatttgaacaaccatttcatacaacttttggtgacaacttctt 51650488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 7231895 - 7231933
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  7231895 gagtagtgatatttgaacaaccatttgatacaacttttg 7231933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 20893131 - 20893169
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  20893131 gagtagtgatattttaacaaccatttgagacaacttttg 20893169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 31249208 - 31249250
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||| |||||||||||||||||||||| | ||||||||||||    
T  31249208 atgaggagtgatatttgaacaaccatttcatacaacttttggt 31249250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 41111961 - 41112011
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||| |||||| |||||||||||   ||||||||||    
T  41111961 gagtagtgatatttgaacatccatttgagacaacttttttaacaacttctt 41112011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 20162584 - 20162621
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactttt 296  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  20162584 gagtagtgatatttgaacatccatttgagacaactttt 20162621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 28269987 - 28269938
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||| ||||||||||||||| | ||||||||||||  ||||||||||    
T  28269987 agtagtgttatttgaacaaccatatgagacaacttttgcgacaacttctt 28269938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 35272212 - 35272159
Alignment:
Q  257 atgagtagtgatatttgaacaa-ccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||  ||||||||||||||| ||  ||||||||||    
T  35272212 atgagtagtgatatttgaacaattcattttagacaacttatgtgacaacttctt 35272159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 108612 - 108572
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  108612 gagtagtgatatttgaacaactatttcatacaacttttggt 108572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 5399098 - 5399058
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| |  |||||||||||    
T  5399098 gagtagtgatatttgaacaaccatttcatccaacttttggt 5399058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 19418047 - 19418099
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||| |||||||||||||| |||||| |||||||| |||  ||||||||||    
T  19418047 atgagtggtgatatttgaacatccatttgagacaactcttgtgacaacttctt 19418099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 42475864 - 42475904
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||| ||||||||||||||| | ||||||||||||    
T  42475864 atgagtagtgttatttgaacaaccatataagacaacttttg 42475904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 30631734 - 30631784
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631734 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 30631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 35846209 - 35846258
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35846209 agtagtcatatttgaacaaccattttagacaacttttggtacaacttctt 35846258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 20288235 - 20288278
Alignment:
Q  266 gatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  20288235 gatatatgaacaaccattttagacaacttttgatacaacttctt 20288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 40610412 - 40610361
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||| |||||| ||||||||||||  ||||||||||    
T  40610412 tgagtagtgatatttgaacatccatttgagacaacttttgtgacaacttctt 40610361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 28716325 - 28716287
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  28716325 gagtagtgatatttgaacaaccatttgagacaacttttg 28716287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 4638108 - 4638067
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  4638108 tgagtagtgatatttgaacaaccatttcatacaacttttggt 4638067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 51703002 - 51703039
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttg 297  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  51703002 agtagtgatatttgaacaaccatttcagacaacttttg 51703039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 31290092 - 31290144
Alignment:
Q  254 atcatgagtagtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||  |||||||    
T  31290092 atcatgagtggtgatatttgaacaaccatttcacacaacttttgtgacaactt 31290144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 48872840 - 48872880
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  48872840 gagtagtgatatttgaacaaccatttcatacaacttttggt 48872880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 49425918 - 49425878
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  49425918 gagtagtgatatttgaacaaccatttcatacaacttttggt 49425878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 46948161 - 46948111
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||| |||||| |||||||| |||  ||||||||||    
T  46948161 gagtagtgatatttgaacatccatttgagacaactcttgtgacaacttctt 46948111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 51571608 - 51571558
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||| ||||||||||||||||||||| | ||||||||||  ||||||||||    
T  51571608 gagttgtgatatttgaacaaccatttaatacaacttttgtgacaacttctt 51571558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 7503649 - 7503608
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  7503649 tgagcagtgatatttgaacaaccatttcatacaacttttggt 7503608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 45272045 - 45272086
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  45272045 tgaggagtgatatttgaacaaccatttcatacaacttttggt 45272086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 5304719 - 5304759
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  5304719 gagtagtgatatttgaacaaccatttcatacaatttttggt 5304759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 7645441 - 7645493
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||| |||||| |||||| ||||   ||||||||||    
T  7645441 atgagtagtgatatttgaacatccatttgagacaatttttttaacaacttctt 7645493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 285
Target Start/End: Complemental strand, 9445289 - 9445261
Alignment:
Q  257 atgagtagtgatatttgaacaaccatttt 285  Q
    |||||||||||||||||||||||||||||    
T  9445289 atgagtagtgatatttgaacaaccatttt 9445261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 15062028 - 15061988
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  15062028 gagtagtgatatttgaacaaccatttcatataacttttggt 15061988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 15083115 - 15083083
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  15083115 tgatatttgaacaaccatttttgacaacttttg 15083083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 35529445 - 35529397
Alignment:
Q  265 tgatatttgaacaacc-attttagacaacttttggtacaacttcttctc 312  Q
    |||||||||||||||| |||||||||||||||||  ||||||| |||||    
T  35529445 tgatatttgaacaaccgattttagacaacttttgtgacaactttttctc 35529397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 36690460 - 36690508
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||| ||||||||||||||| | ||||||||||||  |||||||    
T  36690460 tgagtagtgttatttgaacaaccatatgagacaacttttgtgacaactt 36690508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 36706561 - 36706609
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||| ||||||||||||||| | ||||||||||||  |||||||    
T  36706561 tgagtagtgttatttgaacaaccatatgagacaacttttgtgacaactt 36706609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 37516097 - 37516061
Alignment:
Q  255 tcatgagtagtgatatttgaacaaccattttagacaa 291  Q
    ||||||||||||||||||||||||||| || ||||||    
T  37516097 tcatgagtagtgatatttgaacaaccacttgagacaa 37516061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 294
Target Start/End: Original strand, 48325668 - 48325704
Alignment:
Q  259 gagtagtgatatttgaacaac-cattttagacaactt 294  Q
    ||||||||||||||||||||| |||||||||||||||    
T  48325668 gagtagtgatatttgaacaactcattttagacaactt 48325704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 24752412 - 24752363
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24752412 agtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 24752363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 26378274 - 26378324
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26378274 gagtagtgatatttgaacaaccattttagacaacttttgatacaacttctt 26378324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 33720195 - 33720143
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||| |||||    
T  33720195 atgaatagtgatatttgaacaaccattttagataatttttggtacaatttctt 33720143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 9954727 - 9954678
Alignment:
Q  263 agtgatatttgaacaaccattttagacaacttttggt-acaacttcttct 311  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  9954727 agtgatatttgaacaaccatttaatacaacttttggtgacaacttcttct 9954678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 294
Target Start/End: Complemental strand, 25554415 - 25554380
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactt 294  Q
    ||||||||||||||||||||||||||| ||||||||    
T  25554415 gagtagtgatatttgaacaaccatttttgacaactt 25554380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 30733191 - 30733153
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  30733191 gagtagtgatatttaaacaaccatttgagacaacttttg 30733153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 34021061 - 34021111
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||| |||||| |||||||||||   ||||||||||    
T  34021061 gagtagtgatatttgaacatccatttgagacaacttttttaacaacttctt 34021111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 294
Target Start/End: Complemental strand, 11785540 - 11785504
Alignment:
Q  259 gagtagtgatatttgaacaac-cattttagacaactt 294  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11785540 gagtagtgatatttgaacaactcattttagacaactt 11785504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 28548909 - 28548949
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  28548909 gagtaatgttatttgaacaaccattttatacaacttttggt 28548949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 32853031 - 32853083
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||| |||| | |||| |||||  ||||||||||    
T  32853031 atgagtagtgatatttgaacaactatttgatacaatttttgtgacaacttctt 32853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 24946177 - 24946134
Alignment:
Q  263 agtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24946177 agtgatatttgaacaaccattttagacaacttttggtacaactt 24946134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 7325895 - 7325852
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggtacaa 303  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  7325895 agtagtgatatttgaacaaccattttagataacttttggtacaa 7325852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 11223748 - 11223798
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  11223748 gagtagtgatatttgaacaatcttttgagacaacttttggtacaacttctt 11223798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 30925538 - 30925583
Alignment:
Q  254 atcatgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  30925538 atcaagagtagtgatatttgaacaaccattttatacaacttttggt 30925583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 21648818 - 21648859
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  21648818 tgagtagtgatattttaacaaccatttgagacaacttttggt 21648859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 14029131 - 14029171
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  14029131 gagtagtgatattttaacaaccatttgagacaacttttggt 14029171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 45101578 - 45101538
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  45101578 gagtagtgatatttgaacaaccatttcatacaacttttggt 45101538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 32175138 - 32175087
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||| |||||||||||||||||||| | |||||||||||| ||||||||||    
T  32175138 gagtaatgatatttgaacaaccatttcatacaacttttggtgacaacttctt 32175087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 34474133 - 34474082
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||| |||||||||||||||||||| | |||||||||||| ||||||||||    
T  34474133 gagtaatgatatttgaacaaccatttcatacaacttttggtgacaacttctt 34474082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 38128418 - 38128465
Alignment:
Q  262 tagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||| |||| |||||  ||||||||||    
T  38128418 tagtgatatttgaacaaccattttaaacaatttttgtgacaacttctt 38128465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 42543369 - 42543420
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||||||||    
T  42543369 gagtagtgataattgaacaaccatttcatacaacttttggtgacaacttctt 42543420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Complemental strand, 9963864 - 9963830
Alignment:
Q  263 agtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||||||||||||| ||||||||||    
T  9963864 agtgatatttgaacaaccattttatacaacttttg 9963830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 23258214 - 23258164
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||| | |||| |||||  ||||||||||    
T  23258214 gagtagtgatatttgaacaaccatttgaaacaatttttgtgacaacttctt 23258164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 3650297 - 3650256
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||    
T  3650297 tgagtagtgatattttaacaaccatttgagataacttttggt 3650256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 38779204 - 38779151
Alignment:
Q  257 atgagtagtgatatttgaacaac-cattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||| |||||||||||| || ||  ||||||||||    
T  38779204 atgagtagtgatatttgaacaactcattttagacaatttatgtgacaacttctt 38779151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 40102207 - 40102158
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    |||||||||| ||||||||||||||| | ||||||||||||  |||||||    
T  40102207 atgagtagtgttatttgaacaaccatatgagacaacttttgtgacaactt 40102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 40413252 - 40413289
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactttt 296  Q
    |||||||||||||||||||||||||| | |||||||||    
T  40413252 gagtagtgatatttgaacaaccatttgatacaactttt 40413289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 43397787 - 43397828
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    |||||||||||||||||||||  |||||||||| ||||||||    
T  43397787 tgatatttgaacaaccattttttacaacttttgttacaactt 43397828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 43403966 - 43403917
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttct 308  Q
    ||||||||||||||||||||| |||| |||||||||| |  |||||||||    
T  43403966 gagtagtgatatttgaacaactatttgagacaactttcgtgacaacttct 43403917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 37101573 - 37101625
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||||||||||||||||||||||||| | |||| |||| || ||||||||||    
T  37101573 tgagtagtgatatttgaacaaccatttcatacaatttttcgtgacaacttctt 37101625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 39719130 - 39719170
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||| ||||||||||| |||||| |||||||    
T  39719130 gagtagtgatattttaacaaccatttgagacaatttttggt 39719170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 40409054 - 40409105
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  40409054 tgagtagtgatatttgaacaactattttagccaacttttggtacaacttctt 40409105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 15596579 - 15596528
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  15596579 tgagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttctt 15596528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 1033330 - 1033280
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  1033330 gagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttctt 1033280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 31240831 - 31240780
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||||    
T  31240831 gagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttctt 31240780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 36792515 - 36792464
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||||    
T  36792515 gagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttctt 36792464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 6953274 - 6953327
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggt-acaacttctt 309  Q
    ||||||||||||||||||||||||||||   |||||||||||| ||||||||||    
T  6953274 atgagtagtgatatttgaacaaccatttcttacaacttttggtgacaacttctt 6953327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 5234358 - 5234398
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  5234358 atgagtagtgatatttgaacaaccatttgatacaacttttg 5234398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 11063978 - 11064014
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttt 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11063978 gagtagtgatatttgaacaaccatttaagacaacttt 11064014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 22257085 - 22257125
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  22257085 gagtagtgatatttgaacaaccatttcatacaacttttggt 22257125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 28481299 - 28481351
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||| |||| |||||||| |||  ||||||||||    
T  28481299 atgagtagtgatatttgaacaactatttgagacaactattgtgacaacttctt 28481351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 28482174 - 28482226
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||||| |||| |||||||| |||  ||||||||||    
T  28482174 atgagtagtgatatttgaacaactatttgagacaactattgtgacaacttctt 28482226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 39241191 - 39241231
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  39241191 gagtagtgatattttaacaaccatttgagacaacttttggt 39241231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 1580169 - 1580208
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaactttt 296  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  1580169 atgagtagtgatatttgaacaaccatttcatacaactttt 1580208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 9567580 - 9567619
Alignment:
Q  260 agtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  9567580 agtagtgatatttgaacaaccattttatacaatttttggt 9567619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 28480426 - 28480477
Alignment:
Q  258 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||| |||| |||||||| |||  ||||||||||    
T  28480426 tgagtagtgatatttgaacaactatttgagacaactattgtgacaacttctt 28480477  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 10994042 - 10994092
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||| |||||||||||| || ||  ||||||||||    
T  10994042 gagtagtgatatttgaacaatcattttagacaatttatgcgacaacttctt 10994092  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 31275328 - 31275290
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttg 297  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  31275328 gagtagtgatatttgaacaaccatttgatacaacttttg 31275290  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 38160659 - 38160697
Alignment:
Q  257 atgagtagtgatatttgaacaac-cattttagacaactt 294  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  38160659 atgagtagtgatatttgaacaactcattttagacaactt 38160697  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 42915108 - 42915158
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    ||||||||||||||||||||| |||| | ||||||||||  ||||||||||    
T  42915108 gagtagtgatatttgaacaactatttgatacaacttttgtgacaacttctt 42915158  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 51389494 - 51389448
Alignment:
Q  263 agtgatatttgaacaaccattttagacaacttttggtacaacttctt 309  Q
    |||||||||||||||||||||| | ||||||||||  ||||||||||    
T  51389494 agtgatatttgaacaaccatttgatacaacttttgtgacaacttctt 51389448  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 16004214 - 16004263
Alignment:
Q  257 atgagtagtgatatttgaacaaccattttagacaacttttggtacaactt 306  Q
    ||||||||||||||||||||| |||||| |||||||| |||  |||||||    
T  16004214 atgagtagtgatatttgaacatccatttgagacaactcttgtgacaactt 16004263  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 45082987 - 45083019
Alignment:
Q  265 tgatatttgaacaaccattttagacaacttttg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  45082987 tgatatttgaacaaccatttttgacaacttttg 45083019  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 48099992 - 48099952
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||| ||||||||||| | ||||||||||||    
T  48099992 gagtagtgatatttaaacaaccatttcatacaacttttggt 48099952  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 51039006 - 51039046
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggt 299  Q
    |||||||||||||| ||||||||||| | ||||||||||||    
T  51039006 gagtagtgatatttaaacaaccatttcatacaacttttggt 51039046  T

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Target: scaffold0508 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 11425 - 11469
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttggtacaa 303  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  11425 gagtagtgatatttgaacaactattttagacaacttttgatacaa 11469  T

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Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 298
Target Start/End: Complemental strand, 6999 - 6960
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaacttttgg 298  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  6999 gagtagtgatatttgaacaaccattttatacaacttttgg 6960  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 36184 - 36147
Alignment:
Q  259 gagtagtgatatttgaacaaccattttagacaactttt 296  Q
    |||||||||||||||||||||||||| | |||||||||    
T  36184 gagtagtgatatttgaacaaccatttgatacaactttt 36147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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