View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18014_low_12 (Length: 312)
Name: NF18014_low_12
Description: NF18014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18014_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 10852719 - 10852425
Alignment:
| Q |
1 |
cacaccccactcacgcctacaattggacatgatatggatggcccgccagaaggttgcccaatgaattttgaataggctctaaaactatcttagaatttgg |
100 |
Q |
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| T |
10852719 |
cacacccacctcacgcctacaattggacatgatatggatggcccgccagaaggttgcccaatggattttgaataggctctaaaactatcttagaatttgg |
10852620 |
T |
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| Q |
101 |
gatgtaccaaactcaatcccacaaaactagcttagaggtgagggatgtctcccacttataaaacctaattttgggccatataacatccaatgtggaactt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |
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| T |
10852619 |
gatgtaccaaactcaatcccacaaaactagcttagaggtgagggatgtctcccacttataaaacctaattttgggccat-----atccaatgtggaagtt |
10852525 |
T |
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| Q |
201 |
tgaacaattttattcttaaaaaaggaacaataagggagacatatgaaggggatatgtgactagatgcctttagagggattttctactataacaacaacaa |
300 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10852524 |
tgaataattttattcttaaaaaaggaacaataagggagacatatgaaggggatatgtgactagatgcctttagagggattttctactataacaacaacaa |
10852425 |
T |
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