View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18015_low_7 (Length: 229)

Name: NF18015_low_7
Description: NF18015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18015_low_7
NF18015_low_7
[»] chr6 (50 HSPs)
chr6 (9-229)||(15041237-15041457)
chr6 (19-220)||(19863202-19863403)
chr6 (19-229)||(22432474-22432684)
chr6 (9-229)||(16924566-16924786)
chr6 (9-177)||(31164586-31164754)
chr6 (19-229)||(25641870-25642080)
chr6 (9-229)||(16964997-16965217)
chr6 (23-229)||(22439028-22439234)
chr6 (9-229)||(16929281-16929497)
chr6 (19-163)||(19873344-19873488)
chr6 (19-229)||(21739709-21739919)
chr6 (19-160)||(22334647-22334788)
chr6 (19-229)||(18907330-18907541)
chr6 (19-229)||(16523090-16523300)
chr6 (88-229)||(18180780-18180921)
chr6 (88-178)||(17804474-17804564)
chr6 (88-178)||(27415681-27415771)
chr6 (89-178)||(12496586-12496675)
chr6 (89-178)||(18955502-18955591)
chr6 (39-228)||(21834578-21834767)
chr6 (88-159)||(22429788-22429859)
chr6 (89-178)||(1644983-1645072)
chr6 (89-178)||(12706966-12707055)
chr6 (89-178)||(20907720-20907809)
chr6 (90-178)||(9482032-9482120)
chr6 (89-161)||(16741484-16741556)
chr6 (90-178)||(23990200-23990288)
chr6 (92-178)||(21702568-21702654)
chr6 (89-178)||(19663046-19663135)
chr6 (97-178)||(19790518-19790599)
chr6 (89-178)||(22863224-22863313)
chr6 (90-178)||(8244140-8244228)
chr6 (90-178)||(11567142-11567230)
chr6 (89-161)||(14472548-14472620)
chr6 (90-178)||(23395348-23395436)
chr6 (90-148)||(19870870-19870928)
chr6 (90-148)||(25135441-25135499)
chr6 (89-178)||(5616553-5616642)
chr6 (19-160)||(15894185-15894326)
chr6 (89-146)||(23657191-23657248)
chr6 (113-178)||(25766907-25766972)
chr6 (90-178)||(1587470-1587558)
chr6 (90-178)||(12618583-12618671)
chr6 (90-178)||(18917005-18917093)
chr6 (121-229)||(22405752-22405860)
chr6 (97-153)||(22592568-22592624)
chr6 (90-178)||(27567348-27567436)
chr6 (82-153)||(22059506-22059577)
chr6 (100-153)||(20803317-20803370)
chr6 (89-138)||(27553386-27553435)
[»] chr7 (50 HSPs)
chr7 (19-229)||(18154523-18154733)
chr7 (18-220)||(19649180-19649382)
chr7 (19-229)||(24054691-24054901)
chr7 (19-220)||(9703489-9703690)
chr7 (19-229)||(11880475-11880685)
chr7 (19-229)||(12321429-12321639)
chr7 (19-229)||(17137750-17137960)
chr7 (19-229)||(12187236-12187446)
chr7 (82-220)||(10508778-10508916)
chr7 (19-229)||(14430101-14430311)
chr7 (82-229)||(2760413-2760560)
chr7 (89-161)||(18814-18886)
chr7 (90-178)||(13149433-13149521)
chr7 (88-178)||(12318404-12318494)
chr7 (88-161)||(48593212-48593285)
chr7 (88-178)||(11312925-11313015)
chr7 (88-178)||(11987489-11987579)
chr7 (88-178)||(13635208-13635298)
chr7 (88-178)||(15605011-15605101)
chr7 (89-178)||(26292673-26292762)
chr7 (90-178)||(12715144-12715232)
chr7 (89-178)||(6801490-6801579)
chr7 (88-161)||(9593622-9593695)
chr7 (88-161)||(9644585-9644658)
chr7 (97-178)||(18557257-18557338)
chr7 (90-178)||(12718948-12719036)
chr7 (90-178)||(12723859-12723947)
chr7 (89-161)||(16438790-16438862)
chr7 (90-178)||(16906939-16907027)
chr7 (90-178)||(18279683-18279771)
chr7 (90-178)||(18283646-18283734)
chr7 (89-153)||(8917704-8917768)
chr7 (90-178)||(15728603-15728691)
chr7 (90-178)||(16114521-16114609)
chr7 (90-178)||(16117674-16117762)
chr7 (88-178)||(11262605-11262695)
chr7 (88-178)||(11548006-11548096)
chr7 (88-178)||(11554602-11554692)
chr7 (92-178)||(16275772-16275858)
chr7 (89-178)||(14217192-14217281)
chr7 (88-145)||(15580968-15581025)
chr7 (97-145)||(9445930-9445978)
chr7 (98-178)||(12692782-12692862)
chr7 (89-153)||(13462039-13462103)
chr7 (98-178)||(14953484-14953564)
chr7 (127-229)||(15211759-15211861)
chr7 (94-148)||(35151888-35151942)
chr7 (89-178)||(25038949-25039038)
chr7 (98-178)||(14959450-14959530)
chr7 (97-145)||(20569368-20569416)
[»] chr1 (35 HSPs)
chr1 (19-229)||(21714772-21714982)
chr1 (19-227)||(42864900-42865108)
chr1 (20-220)||(22468392-22468592)
chr1 (26-229)||(21787729-21787932)
chr1 (19-229)||(22831065-22831275)
chr1 (19-229)||(21022860-21023070)
chr1 (19-229)||(6152077-6152287)
chr1 (87-229)||(3472613-3472755)
chr1 (19-160)||(20091229-20091370)
chr1 (26-229)||(18181808-18182011)
chr1 (89-220)||(8761329-8761460)
chr1 (92-178)||(20138364-20138450)
chr1 (88-178)||(36819047-36819137)
chr1 (88-161)||(16080200-16080273)
chr1 (88-178)||(17678326-17678416)
chr1 (88-178)||(21305591-21305681)
chr1 (88-178)||(33797810-33797900)
chr1 (89-161)||(12647147-12647219)
chr1 (90-178)||(20228548-20228636)
chr1 (102-229)||(22432470-22432597)
chr1 (89-178)||(18882645-18882734)
chr1 (89-178)||(46975745-46975834)
chr1 (90-178)||(16375196-16375284)
chr1 (90-178)||(21407635-21407723)
chr1 (92-148)||(21615718-21615774)
chr1 (90-178)||(52639821-52639909)
chr1 (82-145)||(22449037-22449100)
chr1 (88-178)||(19212144-19212234)
chr1 (89-178)||(45489482-45489571)
chr1 (90-153)||(23819063-23819126)
chr1 (88-178)||(24782839-24782929)
chr1 (89-178)||(23763489-23763578)
chr1 (89-146)||(45310137-45310194)
chr1 (98-178)||(21438081-21438161)
chr1 (19-75)||(48603739-48603795)
[»] chr8 (48 HSPs)
chr8 (19-229)||(21395669-21395879)
chr8 (19-229)||(21790162-21790372)
chr8 (21-229)||(21389139-21389347)
chr8 (19-229)||(19899317-19899527)
chr8 (19-220)||(17353633-17353834)
chr8 (19-229)||(16184950-16185160)
chr8 (19-229)||(19976667-19976877)
chr8 (27-229)||(21168408-21168610)
chr8 (19-222)||(24755943-24756146)
chr8 (19-229)||(19983315-19983525)
chr8 (19-229)||(30642978-30643188)
chr8 (82-229)||(22010366-22010513)
chr8 (19-229)||(23776521-23776732)
chr8 (82-229)||(20465726-20465873)
chr8 (19-229)||(377500-377710)
chr8 (85-229)||(19259288-19259432)
chr8 (19-229)||(15602704-15602914)
chr8 (19-229)||(15611156-15611366)
chr8 (19-229)||(17926394-17926604)
chr8 (90-161)||(23846771-23846842)
chr8 (89-178)||(15532166-15532255)
chr8 (89-178)||(24433976-24434065)
chr8 (90-178)||(22113467-22113555)
chr8 (90-178)||(22134970-22135058)
chr8 (119-229)||(16409942-16410052)
chr8 (89-178)||(15538726-15538815)
chr8 (27-132)||(21161842-21161947)
chr8 (90-178)||(22166120-22166208)
chr8 (89-220)||(20856121-20856252)
chr8 (88-178)||(16231214-16231304)
chr8 (88-178)||(22028834-22028924)
chr8 (88-178)||(23834450-23834540)
chr8 (89-153)||(17828347-17828411)
chr8 (90-178)||(43252092-43252180)
chr8 (92-178)||(17055128-17055214)
chr8 (88-148)||(16861095-16861155)
chr8 (98-178)||(22045145-22045225)
chr8 (92-148)||(32598959-32599015)
chr8 (92-148)||(32605491-32605547)
chr8 (89-145)||(39094713-39094769)
chr8 (89-178)||(18619756-18619845)
chr8 (89-178)||(20527727-20527816)
chr8 (89-178)||(30308493-30308582)
chr8 (90-146)||(21972355-21972411)
chr8 (90-146)||(21976440-21976496)
chr8 (194-229)||(21161802-21161837)
chr8 (113-160)||(22875385-22875432)
chr8 (90-178)||(19278023-19278110)
[»] scaffold0102 (1 HSPs)
scaffold0102 (19-229)||(48147-48357)
[»] scaffold0004 (3 HSPs)
scaffold0004 (19-229)||(70018-70228)
scaffold0004 (88-178)||(10323-10413)
scaffold0004 (89-178)||(58157-58246)
[»] scaffold0139 (1 HSPs)
scaffold0139 (19-220)||(20205-20406)
[»] chr5 (48 HSPs)
chr5 (22-229)||(26704291-26704498)
chr5 (22-229)||(26974024-26974231)
chr5 (19-220)||(37724126-37724327)
chr5 (19-210)||(14079370-14079561)
chr5 (19-229)||(22032538-22032748)
chr5 (29-229)||(23512339-23512539)
chr5 (19-220)||(23201590-23201792)
chr5 (19-229)||(18769691-18769901)
chr5 (19-229)||(23501032-23501242)
chr5 (82-220)||(23572364-23572502)
chr5 (19-229)||(21366353-21366563)
chr5 (97-229)||(21887124-21887256)
chr5 (87-229)||(20805837-20805979)
chr5 (88-178)||(23535328-23535418)
chr5 (19-143)||(21873471-21873595)
chr5 (88-178)||(17410724-17410814)
chr5 (88-178)||(20910539-20910629)
chr5 (88-161)||(18356604-18356677)
chr5 (90-178)||(21884928-21885016)
chr5 (89-178)||(21340506-21340595)
chr5 (89-178)||(26665870-26665959)
chr5 (89-178)||(26937467-26937556)
chr5 (90-178)||(19472458-19472546)
chr5 (90-158)||(26172743-26172811)
chr5 (88-147)||(1858746-1858805)
chr5 (88-178)||(23451634-23451724)
chr5 (88-178)||(23463139-23463229)
chr5 (89-146)||(123076-123133)
chr5 (89-178)||(16674430-16674519)
chr5 (89-178)||(20232828-20232917)
chr5 (97-218)||(31342403-31342524)
chr5 (89-161)||(17918907-17918979)
chr5 (90-178)||(20296127-20296215)
chr5 (88-178)||(23458878-23458968)
chr5 (89-178)||(12028304-12028393)
chr5 (97-174)||(17718182-17718259)
chr5 (97-178)||(24222174-24222255)
chr5 (89-178)||(24532787-24532876)
chr5 (97-161)||(18774490-18774554)
chr5 (89-161)||(26742502-26742574)
chr5 (89-153)||(42805698-42805762)
chr5 (90-153)||(25229170-25229233)
chr5 (90-153)||(25293326-25293389)
chr5 (89-178)||(21295002-21295091)
chr5 (89-178)||(25535266-25535355)
chr5 (89-178)||(26680868-26680957)
chr5 (89-178)||(26952475-26952564)
chr5 (100-161)||(18784336-18784397)
[»] chr2 (42 HSPs)
chr2 (19-229)||(23038257-23038467)
chr2 (19-229)||(22798813-22799023)
chr2 (19-229)||(22740647-22740857)
chr2 (19-220)||(40621904-40622105)
chr2 (19-229)||(22758402-22758612)
chr2 (19-229)||(23019393-23019603)
chr2 (54-229)||(23100917-23101092)
chr2 (19-229)||(45677842-45678052)
chr2 (19-229)||(25963404-25963614)
chr2 (19-229)||(37524886-37525096)
chr2 (85-229)||(24673864-24674008)
chr2 (19-229)||(21918003-21918213)
chr2 (90-178)||(15477883-15477971)
chr2 (90-158)||(19928261-19928329)
chr2 (89-178)||(22460929-22461018)
chr2 (88-178)||(19688495-19688585)
chr2 (88-178)||(24735680-24735770)
chr2 (90-178)||(12901251-12901339)
chr2 (90-178)||(24649636-24649724)
chr2 (90-178)||(27379171-27379259)
chr2 (90-178)||(27383217-27383305)
chr2 (90-148)||(27602076-27602134)
chr2 (89-178)||(18855200-18855289)
chr2 (89-178)||(23187353-23187442)
chr2 (89-178)||(23598616-23598705)
chr2 (97-178)||(24655077-24655158)
chr2 (97-178)||(24870177-24870258)
chr2 (137-229)||(22811621-22811713)
chr2 (90-178)||(24628217-24628305)
chr2 (92-148)||(26125484-26125540)
chr2 (90-146)||(41530780-41530836)
chr2 (92-148)||(41667230-41667286)
chr2 (97-178)||(24175097-24175178)
chr2 (90-178)||(61094-61182)
chr2 (102-162)||(24716285-24716345)
chr2 (97-145)||(25961306-25961354)
chr2 (90-153)||(21327330-21327393)
chr2 (82-153)||(44370062-44370133)
chr2 (19-57)||(23103255-23103293)
chr2 (97-153)||(21318399-21318455)
chr2 (189-229)||(24658032-24658072)
chr2 (97-145)||(40428762-40428810)
[»] chr3 (56 HSPs)
chr3 (19-220)||(15877524-15877725)
chr3 (29-220)||(23408664-23408855)
chr3 (82-229)||(16369692-16369839)
chr3 (19-229)||(15060513-15060723)
chr3 (85-229)||(12173073-12173217)
chr3 (19-229)||(856357-856567)
chr3 (19-229)||(12496476-12496686)
chr3 (19-229)||(18383604-18383814)
chr3 (26-229)||(14878192-14878396)
chr3 (21-229)||(19725599-19725807)
chr3 (26-174)||(23052819-23052967)
chr3 (19-229)||(11298216-11298426)
chr3 (19-229)||(15051737-15051947)
chr3 (19-229)||(23077165-23077375)
chr3 (19-229)||(322810-323020)
chr3 (88-178)||(7793085-7793175)
chr3 (82-229)||(26190696-26190843)
chr3 (82-220)||(12037649-12037787)
chr3 (88-178)||(15849824-15849914)
chr3 (88-178)||(16797793-16797883)
chr3 (89-178)||(326903-326992)
chr3 (89-178)||(1598219-1598308)
chr3 (89-178)||(3833952-3834041)
chr3 (89-178)||(11300250-11300339)
chr3 (19-120)||(17524948-17525049)
chr3 (88-178)||(2897562-2897652)
chr3 (88-178)||(15482939-15483029)
chr3 (88-178)||(16808620-16808710)
chr3 (19-153)||(16909971-16910105)
chr3 (88-178)||(20461239-20461329)
chr3 (89-178)||(15941643-15941732)
chr3 (89-178)||(17242250-17242339)
chr3 (89-178)||(38814662-38814751)
chr3 (91-178)||(1982549-1982636)
chr3 (52-178)||(20723242-20723368)
chr3 (90-148)||(15617656-15617714)
chr3 (88-161)||(31097310-31097383)
chr3 (90-178)||(7109981-7110069)
chr3 (90-178)||(7113916-7114004)
chr3 (85-225)||(11863078-11863217)
chr3 (90-178)||(16697071-16697159)
chr3 (90-178)||(22337002-22337090)
chr3 (90-178)||(27409382-27409470)
chr3 (89-178)||(11594878-11594967)
chr3 (89-178)||(42326222-42326311)
chr3 (85-225)||(11851860-11851999)
chr3 (90-178)||(11855015-11855103)
chr3 (90-178)||(16690498-16690586)
chr3 (90-178)||(22321947-22322035)
chr3 (151-229)||(321701-321779)
chr3 (97-178)||(3402694-3402775)
chr3 (89-178)||(24188055-24188144)
chr3 (89-178)||(55149256-55149345)
chr3 (90-148)||(28950007-28950065)
chr3 (98-178)||(839533-839613)
chr3 (97-145)||(11557156-11557204)
[»] scaffold0131 (1 HSPs)
scaffold0131 (19-229)||(36680-36890)
[»] scaffold0101 (1 HSPs)
scaffold0101 (19-220)||(8653-8854)
[»] scaffold0031 (2 HSPs)
scaffold0031 (19-225)||(65484-65690)
scaffold0031 (88-178)||(53842-53932)
[»] scaffold0021 (1 HSPs)
scaffold0021 (19-217)||(174989-175187)
[»] scaffold0261 (1 HSPs)
scaffold0261 (19-229)||(1562-1772)
[»] chr4 (42 HSPs)
chr4 (19-220)||(13569734-13569935)
chr4 (19-229)||(15093995-15094205)
chr4 (19-229)||(44675854-44676064)
chr4 (19-225)||(12570243-12570449)
chr4 (82-229)||(15121490-15121637)
chr4 (28-220)||(15124850-15125042)
chr4 (19-229)||(23843700-23843911)
chr4 (19-229)||(16356640-16356850)
chr4 (26-229)||(16487765-16487968)
chr4 (90-178)||(9556809-9556897)
chr4 (90-178)||(16243139-16243227)
chr4 (88-178)||(36133701-36133791)
chr4 (90-178)||(18222117-18222205)
chr4 (91-178)||(16678328-16678415)
chr4 (88-161)||(1951517-1951590)
chr4 (89-178)||(15353045-15353134)
chr4 (97-178)||(45938433-45938514)
chr4 (90-178)||(2015057-2015145)
chr4 (91-178)||(19757340-19757427)
chr4 (91-178)||(19782379-19782466)
chr4 (89-178)||(17152226-17152315)
chr4 (89-178)||(23139548-23139637)
chr4 (89-178)||(26243404-26243493)
chr4 (90-178)||(28569183-28569271)
chr4 (90-178)||(33742657-33742745)
chr4 (89-148)||(27534303-27534362)
chr4 (90-148)||(4561102-4561160)
chr4 (90-148)||(5756706-5756764)
chr4 (89-178)||(11250300-11250389)
chr4 (89-178)||(18237170-18237259)
chr4 (88-148)||(43255930-43255990)
chr4 (97-174)||(3413082-3413159)
chr4 (89-178)||(23838711-23838800)
chr4 (97-178)||(25555802-25555883)
chr4 (92-145)||(42997222-42997275)
chr4 (92-148)||(14708403-14708459)
chr4 (97-145)||(16351620-16351668)
chr4 (88-178)||(41385484-41385574)
chr4 (89-178)||(9530711-9530800)
chr4 (89-178)||(14679240-14679329)
chr4 (98-178)||(14685458-14685538)
chr4 (100-148)||(18602514-18602562)
[»] scaffold0671 (1 HSPs)
scaffold0671 (19-227)||(6325-6533)
[»] scaffold0324 (1 HSPs)
scaffold0324 (39-220)||(15643-15824)
[»] scaffold0081 (3 HSPs)
scaffold0081 (19-229)||(14894-15103)
scaffold0081 (19-229)||(23909-24118)
scaffold0081 (19-229)||(39333-39542)
[»] scaffold0043 (2 HSPs)
scaffold0043 (19-229)||(18462-18672)
scaffold0043 (90-178)||(76910-76998)
[»] scaffold0111 (2 HSPs)
scaffold0111 (28-220)||(32665-32857)
scaffold0111 (90-148)||(8778-8836)
[»] scaffold0311 (1 HSPs)
scaffold0311 (19-222)||(6772-6975)
[»] scaffold0174 (1 HSPs)
scaffold0174 (19-210)||(18159-18350)
[»] scaffold0149 (2 HSPs)
scaffold0149 (19-229)||(3964-4173)
scaffold0149 (19-229)||(8395-8604)
[»] scaffold0096 (1 HSPs)
scaffold0096 (27-229)||(16036-16238)
[»] scaffold0080 (1 HSPs)
scaffold0080 (82-229)||(18343-18490)
[»] scaffold0042 (4 HSPs)
scaffold0042 (19-220)||(34606-34807)
scaffold0042 (82-225)||(41244-41387)
scaffold0042 (89-161)||(64131-64203)
scaffold0042 (89-148)||(76015-76074)
[»] scaffold0297 (1 HSPs)
scaffold0297 (19-178)||(15407-15566)
[»] scaffold0198 (1 HSPs)
scaffold0198 (102-229)||(26706-26833)
[»] scaffold0215 (1 HSPs)
scaffold0215 (22-220)||(27048-27246)
[»] scaffold0023 (3 HSPs)
scaffold0023 (19-229)||(23354-23564)
scaffold0023 (127-229)||(38187-38289)
scaffold0023 (19-75)||(38320-38376)
[»] scaffold0210 (2 HSPs)
scaffold0210 (19-220)||(21502-21703)
scaffold0210 (19-220)||(29394-29595)
[»] scaffold0017 (3 HSPs)
scaffold0017 (97-229)||(190968-191100)
scaffold0017 (98-229)||(192671-192802)
scaffold0017 (90-178)||(56376-56464)
[»] scaffold0056 (1 HSPs)
scaffold0056 (82-225)||(13768-13911)
[»] scaffold0761 (1 HSPs)
scaffold0761 (26-220)||(6005-6199)
[»] scaffold0412 (1 HSPs)
scaffold0412 (19-229)||(6103-6313)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-229)||(46414-46624)
[»] scaffold0393 (1 HSPs)
scaffold0393 (19-229)||(1712-1922)
[»] scaffold0676 (1 HSPs)
scaffold0676 (82-229)||(4712-4859)
[»] scaffold0029 (3 HSPs)
scaffold0029 (82-229)||(13043-13190)
scaffold0029 (90-148)||(61381-61439)
scaffold0029 (93-178)||(65267-65352)
[»] scaffold1296 (1 HSPs)
scaffold1296 (19-229)||(612-822)
[»] scaffold1124 (1 HSPs)
scaffold1124 (19-229)||(2098-2308)
[»] scaffold0615 (1 HSPs)
scaffold0615 (19-229)||(1771-1981)
[»] scaffold0114 (1 HSPs)
scaffold0114 (19-229)||(7512-7722)
[»] scaffold0020 (1 HSPs)
scaffold0020 (119-229)||(178974-179084)
[»] scaffold0013 (1 HSPs)
scaffold0013 (88-178)||(2412-2502)
[»] scaffold0216 (1 HSPs)
scaffold0216 (88-229)||(16808-16949)
[»] scaffold0104 (2 HSPs)
scaffold0104 (100-229)||(2129-2258)
scaffold0104 (100-229)||(9811-9940)
[»] scaffold0008 (2 HSPs)
scaffold0008 (88-225)||(30436-30573)
scaffold0008 (92-148)||(2157-2213)
[»] scaffold0158 (2 HSPs)
scaffold0158 (86-229)||(3128-3271)
scaffold0158 (86-229)||(6794-6937)
[»] scaffold0555 (1 HSPs)
scaffold0555 (19-160)||(804-945)
[»] scaffold0425 (1 HSPs)
scaffold0425 (17-229)||(377-589)
[»] scaffold0476 (2 HSPs)
scaffold0476 (87-229)||(5872-6014)
scaffold0476 (87-229)||(7067-7209)
[»] scaffold0367 (1 HSPs)
scaffold0367 (87-229)||(1183-1325)
[»] scaffold0228 (1 HSPs)
scaffold0228 (88-178)||(18371-18461)
[»] scaffold0044 (3 HSPs)
scaffold0044 (88-178)||(19465-19555)
scaffold0044 (88-178)||(13181-13271)
scaffold0044 (92-148)||(62541-62597)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-229)||(21256-21466)
[»] scaffold0036 (1 HSPs)
scaffold0036 (88-178)||(66154-66244)
[»] scaffold0009 (1 HSPs)
scaffold0009 (88-178)||(228112-228202)
[»] scaffold0003 (4 HSPs)
scaffold0003 (88-178)||(71590-71680)
scaffold0003 (88-178)||(96883-96973)
scaffold0003 (89-178)||(139988-140077)
scaffold0003 (97-145)||(413822-413870)
[»] scaffold1461 (1 HSPs)
scaffold1461 (89-178)||(207-296)
[»] scaffold0585 (1 HSPs)
scaffold0585 (90-178)||(9613-9701)
[»] scaffold0193 (1 HSPs)
scaffold0193 (92-178)||(9701-9787)
[»] scaffold0107 (1 HSPs)
scaffold0107 (88-178)||(15157-15247)
[»] scaffold0001 (1 HSPs)
scaffold0001 (88-178)||(173567-173657)
[»] scaffold1220 (1 HSPs)
scaffold1220 (88-157)||(2079-2148)
[»] scaffold0410 (1 HSPs)
scaffold0410 (89-178)||(11658-11747)
[»] scaffold0177 (1 HSPs)
scaffold0177 (88-161)||(13243-13316)
[»] scaffold0168 (1 HSPs)
scaffold0168 (88-161)||(3286-3359)
[»] scaffold0120 (1 HSPs)
scaffold0120 (89-178)||(19756-19845)
[»] scaffold0070 (1 HSPs)
scaffold0070 (89-178)||(10181-10270)
[»] scaffold0012 (1 HSPs)
scaffold0012 (89-178)||(24707-24796)
[»] scaffold1326 (1 HSPs)
scaffold1326 (82-229)||(1187-1324)
[»] scaffold0483 (1 HSPs)
scaffold0483 (88-164)||(608-684)
[»] scaffold0109 (3 HSPs)
scaffold0109 (88-164)||(45395-45471)
scaffold0109 (90-148)||(11071-11129)
scaffold0109 (90-148)||(38588-38646)
[»] scaffold0327 (1 HSPs)
scaffold0327 (87-229)||(566-698)
[»] scaffold0220 (1 HSPs)
scaffold0220 (82-229)||(4620-4767)
[»] scaffold0280 (1 HSPs)
scaffold0280 (88-178)||(19030-19120)
[»] scaffold1895 (2 HSPs)
scaffold1895 (127-220)||(944-1037)
scaffold1895 (27-107)||(1036-1116)
[»] scaffold0010 (2 HSPs)
scaffold0010 (89-178)||(23494-23583)
scaffold0010 (89-178)||(242335-242424)
[»] scaffold0372 (1 HSPs)
scaffold0372 (90-178)||(4840-4928)
[»] scaffold0346 (1 HSPs)
scaffold0346 (88-204)||(15374-15490)
[»] scaffold0342 (1 HSPs)
scaffold0342 (89-145)||(7042-7098)
[»] scaffold0284 (1 HSPs)
scaffold0284 (90-178)||(18633-18721)
[»] scaffold1552 (1 HSPs)
scaffold1552 (97-174)||(639-716)
[»] scaffold0439 (2 HSPs)
scaffold0439 (97-178)||(2174-2255)
scaffold0439 (97-148)||(10064-10115)
[»] scaffold0184 (1 HSPs)
scaffold0184 (89-146)||(3995-4052)
[»] scaffold0171 (1 HSPs)
scaffold0171 (89-178)||(35249-35338)
[»] scaffold0132 (1 HSPs)
scaffold0132 (89-178)||(36583-36672)
[»] scaffold0371 (1 HSPs)
scaffold0371 (92-148)||(15618-15674)
[»] scaffold0028 (1 HSPs)
scaffold0028 (90-178)||(58457-58545)
[»] scaffold0130 (1 HSPs)
scaffold0130 (89-148)||(5769-5828)
[»] scaffold0546 (1 HSPs)
scaffold0546 (90-148)||(2178-2236)
[»] scaffold0334 (1 HSPs)
scaffold0334 (93-178)||(18099-18184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (89-178)||(192055-192144)
[»] scaffold0034 (1 HSPs)
scaffold0034 (92-148)||(16432-16488)
[»] scaffold0138 (1 HSPs)
scaffold0138 (88-178)||(29946-30036)
[»] scaffold0637 (1 HSPs)
scaffold0637 (89-178)||(8849-8938)
[»] scaffold0064 (1 HSPs)
scaffold0064 (188-229)||(64350-64391)


Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 15041457 - 15041237
Alignment:
Q  9 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15041457 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 15041358  T
Q  109 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 208  Q
    | | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  15041357 ttgcgaggcgagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaggttcaatctcattctaagttatc 15041258  T
Q  209 atctaatctttattaaacatc 229  Q
    |||||| ||||||||||||||    
T  15041257 atctaacctttattaaacatc 15041237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 19863202 - 19863403
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| || |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  19863202 taggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcg 19863301  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | ||||||||||||||||||||||| |||||||    
T  19863302 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaacaaggttcaatctcattctaagttatcatttaatctt 19863401  T
Q  219 ta 220  Q
    ||    
T  19863402 ta 19863403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 22432474 - 22432684
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||| || |||||||||  || ||| ||||||||||| ||||||||||| ||| |||||     
T  22432474 taggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaacttgcactcagttctggaagtgctcgcgaggcg 22432573  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||| | | | |||||||| |||||||||||||| |||||||    
T  22432574 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagttgttcaaggttaaactaggttcaatctcgttctaagttatcatttaatctt 22432673  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  22432674 taatatacatc 22432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 16924786 - 16924566
Alignment:
Q  9 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 108  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||     
T  16924786 acatcatccttaggtctcattactacccaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgc 16924687  T
Q  109 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 208  Q
    ||| ||||| |||||||||||||| ||||||||||||| | |||| | |||||| |  || ||||||||||||||| |  ||||||  | ||||||||||    
T  16924686 tcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattgattattctaggttaatccaggtccaatcttgtcctaagttatc 16924587  T
Q  209 atctaatctttattaaacatc 229  Q
    ||| | |||||||||| ||||    
T  16924586 atcaattctttattaagcatc 16924566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 31164754 - 31164586
Alignment:
Q  9 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 108  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||      
T  31164754 acatcaacattaggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtac 31164655  T
Q  109 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggt 177  Q
    ||| |||||||| |||| |||||  ||||||||||||||| ||| ||||||| ||  ||||||||||||    
T  31164654 tcgcgaggcaagggcatatgctcaccatggcgagtacaagccaggttcccaataaaggttgttctaggt 31164586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 25642080 - 25641870
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||| ||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  25642080 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 25641981  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||  ||||||||| ||||| | | | |||||||| |||||||||||||| |||||||    
T  25641980 agagcatctgctcgccgtggcgagttcaagccagattcccaacaaaggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctt 25641881  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  25641880 taatatacatc 25641870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 16965217 - 16964997
Alignment:
Q  9 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 108  Q
    |||||||| |||||| | |||||||||||||||||||   ||||||||| ||||||| ||||||| | ||||||||||||||||| | |||||||||||     
T  16965217 acatcatccttaggtattattactacccaggggtccactcctaatcaaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgc 16965118  T
Q  109 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 208  Q
    ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||| |  |||||||||||||||||| |  ||||||| | ||||||||||    
T  16965117 tcgtgaggcgagagcatctgctcgccatggcgagtacaagccagacttccaacattgattgttctaggttaatccaggtccaatctcgtcctaagttatc 16965018  T
Q  209 atctaatctttattaaacatc 229  Q
     || | |||||||||| ||||    
T  16965017 ttcaattctttattaagcatc 16964997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 22439028 - 22439234
Alignment:
Q  23 tctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagag 122  Q
    ||||||||||||||| ||||||||||| |||| ||  |||||| |||||||||  ||  |||||||||||||| || |||||||| ||| ||||| ||||    
T  22439028 tctcattactacccaagggtccatctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagag 22439127  T
Q  123 catctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttatt 222  Q
    ||||||||||  |||||||||||||| ||||||||| |||| |||||||||||||||| | | | |||||||| || ||||||||||| ||| ||||| |    
T  22439128 catctgctcgctatggcgagtacaagccagattccctacaaaagttgttctaggttaaactaggttcaatctcgttataagttatcatttaagctttaat 22439227  T
Q  223 aaacatc 229  Q
    | |||||    
T  22439228 atacatc 22439234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 16929497 - 16929281
Alignment:
Q  9 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 108  Q
    |||||||| |||||| ||||||||||| |||||||||   ||||||||| ||||||| ||||||||| ||||||||    ||||||| || |  |||||     
T  16929497 acatcatccttaggtatcattactaccgaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactc----gcactcagttttcaaagtgc 16929402  T
Q  109 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 208  Q
    ||| ||||| |||||||||||||| ||||||||||||| | |||| | |||||| || |||||||||||||||||| |  ||||||||| | ||||||||    
T  16929401 tcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattaattgttctaggttaatccaggtccaatctcatcccaagttatc 16929302  T
Q  209 atctaatctttattaaacatc 229  Q
    ||| | |||||||||| ||||    
T  16929301 atcaattctttattaagcatc 16929281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 19873344 - 19873488
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||||||||| |||  |||||| |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  19873344 taggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcg 19873443  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaa 163  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||    
T  19873444 agagcatctgctcgccatggcgagtacaagccagattccctacaa 19873488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 21739919 - 21739709
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | | ||||||| |||| |||  |||| || |||||||||   |  |||| ||| ||||| ||||||||||| ||| |||||     
T  21739919 taggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaattgtactcagttctggaagtgctcgcgaggcg 21739820  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  21739819 agagcatctgctcaccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 21739720  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  21739719 tagtaaacatc 21739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 22334788 - 22334647
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||| ||||||||||||||| |||||||||||  |||||| |||||||||  ||  |||||||||| ||| ||||||||||| ||| |||||     
T  22334788 taggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcacttgcattcagttctggaagtgctcgcgaggcg 22334689  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 160  Q
    |||||||||||||  ||||||||||  | |||||| ||||||    
T  22334688 agagcatctgctcaccatggcgagtttaggtcagaatcccaa 22334647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 18907330 - 18907541
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||  ||||||||||| ||| |||||     
T  18907330 taggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatttgcactctgttctggaagtgctcgcgaggcg 18907429  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta-agttatcatctaatct 217  Q
    |||||||||||||| ||||||||   |||| |||||| ||||| | |||||||||| | ||| ||| | ||||||||||||||  |||||||  ||||||    
T  18907430 agagcatctgctcgccatggcgaaatcaagccagatttccaactaaagttgttctaagctaagccaggttcaatctcattctagggttatcagttaatct 18907529  T
Q  218 ttattaaacatc 229  Q
    ||| || |||||    
T  18907530 ttaatacacatc 18907541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 16523300 - 16523090
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | || |||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  16523300 taggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 16523201  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||||||  ||| | |||||   |||||||||| | ||| |||   |||||||| |||||| | || ||||||||||    
T  16523200 agagcatctgctcgccatggcgagtacaagctagaattccaacttaagttgttctaagctaaaccagattcaatctcgttctaaatcattatctaatctt 16523101  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  16523100 taataaacatc 16523090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 18180780 - 18180921
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 187  Q
    |||| ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| |     
T  18180780 tgcattcagttctggaagtgctcgcgaggcgagagcatctgctctccatggcgagtacaagccagatttccaactcaagttgttctatgctaaaccaggt 18180879  T
Q  188 tcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| ||||||||||| | ||| ||||||||||| ||||||||    
T  18180880 tcactctcattctaaatcatcctctaatctttaataaacatc 18180921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 17804474 - 17804564
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  17804474 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 17804564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 27415771 - 27415681
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  27415771 tgcactcaattctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 27415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 12496586 - 12496675
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  12496586 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 12496675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 18955591 - 18955502
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||  |||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |  ||||||| |||||    
T  18955591 gcactcaattcgagaagtgctcgcgaggcgagagcatctgctcgtcatggcgagtacaagccagattcccaactaaggttgttccaggtt 18955502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 21834767 - 21834578
Alignment:
Q  39 gggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 138  Q
    ||||||||| ||||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| ||||| ||||||||| |||| |||||    
T  21834767 gggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatgg 21834668  T
Q  139 cgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacat 228  Q
     || |||||| |||| | ||||| | |||||||||| | |||  || | |||||||| |||||| | ||||||||||||||| |||||||    
T  21834667 tgattacaagccagaattccaactaaagttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctttaataaacat 21834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 22429859 - 22429788
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccca 159  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  22429859 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccca 22429788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 1644983 - 1645072
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  1644983 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 1645072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 12706966 - 12707055
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  12706966 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 12707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 20907809 - 20907720
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || |||||||||||||    
T  20907809 gcactcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttctaggtt 20907720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 9482120 - 9482032
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| ||||||| ||||||||||||| |||||||| ||| |||||||| |  ||||||| |||||    
T  9482120 cactcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatggcaagtacaagccaggttcccaactaaggttgttccaggtt 9482032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 16741484 - 16741556
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  16741484 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaac 16741556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 23990200 - 23990288
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| ||  || ||||| |  |||||||||||||    
T  23990200 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgtcgtggcgagtacaagccaactttccaactaaggttgttctaggtt 23990288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 21702568 - 21702654
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || ||| ||||| |  ||||||| |||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaatttccaactaaggttgttccaggtt 21702654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 19663046 - 19663135
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| || |||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||| |||||||||  ||||||| |||||    
T  19663046 gcactcagttttggaagtgctcgcgaggcgatagcatctgctcgccatggcgagtacaagccagaatcccaacaaaggttgttccaggtt 19663135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 19790599 - 19790518
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  19790599 ttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 19790518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 22863224 - 22863313
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22863224 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 8244140 - 8244228
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  8244140 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 8244228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 11567142 - 11567230
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  11567142 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 11567230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 14472548 - 14472620
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| || |||||||||    
T  14472548 gcactcaattctggatgtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccaaattcccaac 14472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 23395348 - 23395436
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  23395348 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 23395436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 19870870 - 19870928
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  19870870 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 19870928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 25135499 - 25135441
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||| |||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  25135499 cactcgattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 25135441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 5616642 - 5616553
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  5616642 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 5616553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 15894326 - 15894185
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| ||||  |||      |||||||||||||| ||||||||||| ||| ||||      
T  15894326 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcacttgcactcagttctggaagtgctcgcgaggtg 15894227  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 160  Q
    ||||  |||||||| |||||||||| || |||||| ||||||    
T  15894226 agagactctgctcgccatggcgagttcaggtcagaatcccaa 15894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 23657248 - 23657191
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 146  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  23657248 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 23657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 25766972 - 25766907
Alignment:
Q  113 gaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  25766972 gaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 25766907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 1587558 - 1587470
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  1587558 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 1587470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 12618671 - 12618583
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||  | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12618671 cactcaattctggaagtgctcgcgaggcgagagcatctgctcaccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12618583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 18917093 - 18917005
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| |||||| ||| ||||| ||| |||||||||| | ||||||||||||| || ||| ||||| |  |||||||||||||    
T  18917093 cactcaattctagaagtgctcgcgaggcgagaacatctgctcgccgtggcgagtacaagccaaatttccaactaaggttgttctaggtt 18917005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 22405860 - 22405752
Alignment:
Q  121 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    |||||||||||| ||||||||||||||  |||||| ||| |   |||||||||| | ||| | | | |||||||| |||||| | |||||| ||||||||    
T  22405860 agcatctgctcgccatggcgagtacaacccagatttccatctcaagttgttctaagctaaacaaggttcaatctcgttctaaatcatcatccaatcttta 22405761  T
Q  221 ttaaacatc 229  Q
    |||||||||    
T  22405760 ttaaacatc 22405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 22592624 - 22592568
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  22592624 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 22592568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 27567436 - 27567348
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  27567436 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 27567348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 22059577 - 22059506
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||| ||||||||| |||| |||||| | | ||||| |||||||||||||| |||||| |||||||| ||||    
T  22059577 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccaga 22059506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 20803370 - 20803317
Alignment:
Q  100 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  20803370 tggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 20803317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 27553435 - 27553386
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 138  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||    
T  27553435 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 27553386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 18154733 - 18154523
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||||||||||||||||  ||||||||| |||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| |||||     
T  18154733 taggtctcattactacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcg 18154634  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  18154633 agagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaagttcaatctcattctaagttatcatttaatctt 18154534  T
Q  219 tattaaacatc 229  Q
    || ||| ||||    
T  18154533 taataagcatc 18154523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 19649382 - 19649180
Alignment:
Q  18 ttaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 117  Q
    |||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  ||||||| |||||  ||||||||||| ||| ||| |    
T  19649382 ttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgagac 19649283  T
Q  118 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 217  Q
     |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||| |    
T  19649282 gagagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatat 19649183  T
Q  218 tta 220  Q
    |||    
T  19649182 tta 19649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 24054691 - 24054901
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| |||||||||  ||  ||||||| |||||| ||||||||||| |||  || |     
T  24054691 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctggaagtgctcgcaagacg 24054790  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | | | |||||||| |||||||||||||| |||||||    
T  24054791 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctt 24054890  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  24054891 taatatacatc 24054901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 9703489 - 9703690
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| ||||| |||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  9703489 taggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 9703588  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  9703589 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 9703688  T
Q  219 ta 220  Q
    ||    
T  9703689 ta 9703690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 11880475 - 11880685
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| ||||||||||| |||||||  |||||| ||| |||||   |  |||||||||||||| ||||||||||| ||  |||||     
T  11880475 taggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctggaagtgctcacgaggcg 11880574  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  11880575 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 11880674  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  11880675 taataaacatc 11880685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 12321639 - 12321429
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||| ||||||||||| ||| |||||     
T  12321639 taggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgcactcagttctggaagtgctcgcgaggcg 12321540  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||  || | |||||||||||||| ||||||||||||||||    
T  12321539 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaatcaggttcaatctcattctaggttatcatctaatctt 12321440  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  12321439 taataaacatc 12321429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 17137960 - 17137750
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  17137960 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 17137861  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||||||||||| |||||||||||||    
T  17137860 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctt 17137761  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  17137760 taataaacatc 17137750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 12187236 - 12187446
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| |  |||||||||||||||||  || || | | | ||| |  ||  |||||||||||||| ||||||||||| ||| |||||     
T  12187236 taggtctcattactacctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactcagttctggaagtgctcgcgaggcg 12187335  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | |||  || | ||||||||||||||||||||||| |||||||    
T  12187336 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaatcaggttcaatctcattctaagttatcatttaatctt 12187435  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  12187436 taataaacatc 12187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 10508916 - 10508778
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||| || |||||||||||| |  |||||| || |||||     
T  10508916 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagccagattcccaactaatgttgttataagttaaa 10508817  T
Q  182 ccaagctcaatctcattctaagttatcatctaatcttta 220  Q
     || | ||||||||||||||||||||||| |||||||||    
T  10508816 tcaggttcaatctcattctaagttatcatttaatcttta 10508778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 14430101 - 14430311
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  14430101 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 14430200  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  14430201 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 14430300  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  14430301 taataaacatc 14430311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 2760413 - 2760560
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||| ||||||||| ||||||||||| ||| ||||| ||||||||| |||| |||| |||||||||| || ||| |||||   |||||||| | | |||     
T  2760413 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgacgagtacaagccatatttccaactccagttgttcgaagctaaa 2760512  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | |||||||| |||||| | ||||||||||||||||||||||||    
T  2760513 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatc 2760560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 18886 - 18814
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  18886 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaac 18814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 13149433 - 13149521
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13149433 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13149521  T

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Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 12318404 - 12318494
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||| |||||||||||| |  ||||||| |||||    
T  12318404 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatagcgagtacaagccagattcccaactaaggttgttccaggtt 12318494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 48593285 - 48593212
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  48593285 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 48593212  T

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Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 11312925 - 11313015
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||  ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11312925 tgcactcagttctggaagtgctcccgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11313015  T

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Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 11987489 - 11987579
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11987489 tgcactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11987579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 13635298 - 13635208
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||| ||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13635298 tgcactcagttctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13635208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 15605101 - 15605011
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| |||| |||||||||  |||||||||||||||||||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  15605101 tgcactcagttctagaagtggtcacgaggcaagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 15605011  T

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Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 26292673 - 26292762
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  26292673 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 26292762  T

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Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 12715144 - 12715232
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12715144 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12715232  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 6801490 - 6801579
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || | ||||||| |  ||||||| |||||    
T  6801490 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgttccaggtt 6801579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 9593622 - 9593695
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||||| |||||    
T  9593622 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaac 9593695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 9644585 - 9644658
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||||| |||||    
T  9644585 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaac 9644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 18557257 - 18557338
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  18557257 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactacggttgttctaggtt 18557338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 12718948 - 12719036
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12718948 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12719036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 12723859 - 12723947
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12723859 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12723947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 16438862 - 16438790
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||| ||| ||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  16438862 gcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 16438790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 16907027 - 16906939
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16907027 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16906939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 18279683 - 18279771
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  18279683 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 18279771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 18283646 - 18283734
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  18283646 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 18283734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 8917704 - 8917768
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    ||||||| ||||||||||| ||| |||||||||||||| ||||| ||| ||||||||||| ||||    
T  8917704 gcactcagttctggaagtgctcgcgaggcaagagcatcagctcgccattgcgagtacaagccaga 8917768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 15728603 - 15728691
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  15728603 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 15728691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 16114521 - 16114609
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16114521 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16114609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 16117674 - 16117762
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16117674 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16117762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 11262605 - 11262695
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11262605 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11262695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 11548096 - 11548006
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11548096 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11548006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 11554692 - 11554602
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11554692 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 16275772 - 16275858
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||| ||| ||||| |||||||||| ||| |||||| |||||||| ||  |||||||| |  ||||||| |||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcaagtacaagccaacttcccaactaaggttgttccaggtt 16275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 14217192 - 14217281
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||  |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  14217192 gcactcagttctggaagtgctcgcgaggtgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 14217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 15580968 - 15581025
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  15580968 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 15581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 9445978 - 9445930
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  9445978 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 9445930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 12692782 - 12692862
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  12692782 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 12692862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 13462039 - 13462103
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||| ||||||||| ||||    
T  13462039 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggtgagtacaagccaga 13462103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 14953484 - 14953564
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  14953484 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 14953564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 15211759 - 15211861
Alignment:
Q  127 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 226  Q
    |||||| |||||||||||||||  ||| ||||||| | ||||  |||  | ||| ||| | ||||||||||||||||||||||| ||||| ||  |||||    
T  15211759 tgctcgccatggcgagtacaagctagaatcccaactaaagttaatctgagctaaaccaggttcaatctcattctaagttatcatttaatcatttataaac 15211858  T
Q  227 atc 229  Q
    |||    
T  15211859 atc 15211861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 35151888 - 35151942
Alignment:
Q  94 caattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||| |||||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  35151888 caattttggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaag 35151942  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 25039038 - 25038949
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||  ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  25039038 gcactccaatctggaagtgctcgcgaggcgagagtatctactcaccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 25038949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 14959450 - 14959530
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||| ||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  14959450 tctgaaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 14959530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 20569416 - 20569368
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    |||| |||||| ||| ||||| |||||||||||||| ||||||||||||    
T  20569416 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 20569368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 21714772 - 21714982
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| |||||     
T  21714772 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcg 21714871  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  21714872 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 21714971  T
Q  219 tattaaacatc 229  Q
    || ||| ||||    
T  21714972 taataagcatc 21714982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 42865108 - 42864900
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  42865108 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 42865009  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  42865008 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 42864909  T
Q  219 tattaaaca 227  Q
    || ||||||    
T  42864908 taataaaca 42864900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 220
Target Start/End: Complemental strand, 22468592 - 22468392
Alignment:
Q  20 aggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaa 119  Q
    |||||||| ||||||||| |||||||||||||||| ||  |||||| ||| |||||  ||  |||||||||||||| ||||||||||| ||| ||||| |    
T  22468592 aggtctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcga 22468493  T
Q  120 gagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttt 219  Q
    |||||||||||| ||||| |||||||||| |||||||||||| |  ||||||||| ||||| ||  | |||||||| |||||||||||||| ||||||||    
T  22468492 gagcatctgctcttcatgtcgagtacaagccagattcccaactaatgttgttctaagttaaacctggttcaatctctttctaagttatcatttaatcttt 22468393  T
Q  220 a 220  Q
    |    
T  22468392 a 22468392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 21787932 - 21787729
Alignment:
Q  26 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 125  Q
    |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||| ||||| ||| ||||| |||||||    
T  21787932 cattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggcgagagcat 21787833  T
Q  126 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 225  Q
    ||||||| |||||||||||| || |||||||||||| |  |||||| || | ||| ||| | ||||||||||||||||||||||| ||||||||||||||    
T  21787832 ctgctcgccatggcgagtacgagccagattcccaactaatgttgttataagctaaaccaggttcaatctcattctaagttatcatataatctttattaaa 21787733  T
Q  226 catc 229  Q
    ||||    
T  21787732 catc 21787729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 22831275 - 22831065
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | | ||||||| |||| |||  ||||||| |||||||||   |  |||| ||||||||| ||| ||||||| ||| |||||     
T  22831275 taggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaattgcactcagttcaggaagtgctcgcgaggcg 22831176  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  22831175 agagcatctgctcgccatggcgagtacaagccagattctcaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 22831076  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  22831075 taataaacatc 22831065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 21022860 - 21023070
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | |||||||||  |||||||| || || | ||||||| ||  |  |||||| | ||| | ||||||||||| ||| |||||     
T  21022860 taggtcacattactacctaagggtccatccttaatcaaatcaagcaacacagatcacgacattctcactagtactgagttctggaagtgctcgcgaggcg 21022959  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||| || |||| ||||||| |  ||||||||| | ||| ||| | ||||||||||||||||| |||||||||||||    
T  21022960 agagcatctgctcgccatggcgagtacgagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctt 21023059  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  21023060 taataaacatc 21023070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 6152077 - 6152287
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| |||||||||   |  || || |||| ||| ||||||||||| ||| |||||     
T  6152077 taggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaacatgcattcagttctggaagtgctcgcgaggcg 6152176  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||  ||||||||||||||| |||||||    
T  6152177 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatcctattctaagttatcatttaatctt 6152276  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  6152277 taataaacatc 6152287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 3472755 - 3472613
Alignment:
Q  87 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 186  Q
    ||||| ||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| |    
T  3472755 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccagg 3472656  T
Q  187 ctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     ||||||||||||||| | ||||||||||||||| ||||||||    
T  3472655 ttcaatctcattctaaatcatcatctaatctttaataaacatc 3472613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 20091370 - 20091229
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||||| |||||||  |||||| |||||||||  ||  |||| ||||||||| ||||||||||| ||| ||||      
T  20091370 taggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatttgcactcagttctggaagtgctcgcgaggtg 20091271  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 160  Q
    ||| |||||||||| |||||||||| || |||||| ||||||    
T  20091270 agaacatctgctcgccatggcgagttcaggtcagaatcccaa 20091229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 18182011 - 18181808
Alignment:
Q  26 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 125  Q
    |||||||||| | | ||||||| ||||||||   |||||| |||||||||   |  || ||||||||||| ||||||||||| |||  |||| |||||||    
T  18182011 cattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcaaggcgagagcat 18181912  T
Q  126 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 225  Q
    ||||||| ||| ||||||||||| |||| | ||||| | |||||||||| | ||| ||| | |||||| | |||||||| ||||||||||| ||| ||||    
T  18181911 ctgctcgccatagcgagtacaagccagaattccaactaaagttgttctaagctaaaccaggttcaatcccgttctaagtcatcatctaatcattaataaa 18181812  T
Q  226 catc 229  Q
    ||||    
T  18181811 catc 18181808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 8761460 - 8761329
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagct 188  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||  |||| | |||||||||| | ||||||| | |    
T  8761460 gcactcagttctggaagtgttcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaatccaggtt 8761361  T
Q  189 caatctcattctaagttatcatctaatcttta 220  Q
    ||||||  |||||| | ||| |||||||||||    
T  8761360 caatcttgttctaaatcatcctctaatcttta 8761329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 20138364 - 20138450
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||| ||||||||||||||||||||||| |  |||||||| ||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagtcagattcccaactaaggttgttctgggtt 20138450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 36819137 - 36819047
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  36819137 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 36819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 16080273 - 16080200
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  16080273 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 16080200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 17678416 - 17678326
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  17678416 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 17678326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 21305591 - 21305681
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  21305591 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 21305681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 33797810 - 33797900
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || ||||||||| |  ||||||| |||||    
T  33797810 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaattcccaactaaggttgttccaggtt 33797900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 12647147 - 12647219
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  12647147 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 12647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 20228636 - 20228548
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  20228636 cactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 20228548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 22432597 - 22432470
Alignment:
Q  102 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta 201  Q
    |||||| ||| ||||| | |||||||||||| ||||||||| ||| | |||| ||||||| | |||||||||| | ||| |||   |||||||  |||||    
T  22432597 gaagtgctcgcgaggcgaaagcatctgctcgccatggcgaggacaggccagaatcccaactaaagttgttctaagctaaaccagattcaatcttgttcta 22432498  T
Q  202 agttatcatctaatctttattaaacatc 229  Q
    ||| ||||||||||||||| ||||||||    
T  22432497 agtcatcatctaatctttaataaacatc 22432470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 18882645 - 18882734
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||||| || | ||||||| |  ||||||| |||||    
T  18882645 gcactcagttcttgaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgttccaggtt 18882734  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 46975745 - 46975834
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||| |  ||||||| |||||    
T  46975745 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagaaagaatcccaactaaggttgttccaggtt 46975834  T

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Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 16375284 - 16375196
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16375284 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16375196  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 21407635 - 21407723
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  21407635 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 21407723  T

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Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 21615718 - 21615774
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 21615774  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 52639821 - 52639909
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  52639821 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 52639909  T

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Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 22449100 - 22449037
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  22449100 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 22449037  T

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Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 19212144 - 19212234
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||| ||||||||| ||||||| |||| |  ||||||| |||||    
T  19212144 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattctcaactaaggttgttccaggtt 19212234  T

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Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 45489571 - 45489482
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  45489571 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactcgccagatttccaactaaggttgttccaggtt 45489482  T

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Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 23819126 - 23819063
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  23819126 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 23819063  T

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Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 24782929 - 24782839
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  24782929 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 24782839  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 23763489 - 23763578
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  23763489 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 23763578  T

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Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 45310194 - 45310137
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 146  Q
    ||||||| ||||| ||||| ||| ||||| |||||||||||||| |||||||||||||    
T  45310194 gcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 45310137  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 21438081 - 21438161
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  21438081 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 21438161  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 48603739 - 48603795
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgc 75  Q
    |||||| || ||||||| ||||||||||||||||||||  ||||| | |||||||||    
T  48603739 taggtcacaatactacctaggggtccatctctaatcaattcatgcaacacagatcgc 48603795  T

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Target: chr8 (Bit Score: 119; Significance: 6e-61; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 21395879 - 21395669
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||| ||| ||| |||||     
T  21395879 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21395780  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  21395779 agagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctt 21395680  T
Q  219 tattaaacatc 229  Q
    |||||| ||||    
T  21395679 tattaagcatc 21395669  T

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Target: chr8; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 21790372 - 21790162
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||| ||| ||| |||||     
T  21790372 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21790273  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  21790272 agagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctt 21790173  T
Q  219 tattaaacatc 229  Q
    |||||| ||||    
T  21790172 tattaagcatc 21790162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 21389347 - 21389139
Alignment:
Q  21 ggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaag 120  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| || || ||    
T  21389347 ggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaagcgag 21389248  T
Q  121 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    |||||||||||  | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||||    
T  21389247 agcatctgctcaccttggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatcttta 21389148  T
Q  221 ttaaacatc 229  Q
    |||| ||||    
T  21389147 ttaagcatc 21389139  T

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Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 19899317 - 19899527
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  19899317 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 19899416  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  19899417 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 19899516  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  19899517 taataaacatc 19899527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 17353834 - 17353633
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| ||| |||||  ||  |||||||||||||| ||||| ||||| ||| |||||     
T  17353834 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacaaatcgcaatatcctcacttgcactcagttctgcaagtgctcgcgaggcg 17353735  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||| | | | |||||||| ||| |||||||||| |||||||    
T  17353734 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagctgttctaggttaaactaggttcaatctcgttcaaagttatcatttaatctt 17353635  T
Q  219 ta 220  Q
    ||    
T  17353634 ta 17353633  T

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Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 16184950 - 16185160
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||| ||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  16184950 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 16185049  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| | |||||||||| |  || ||| | ||||||||||||||||||||||| |||||||    
T  16185050 agagcatctgctcgccatggcgagtacaagccagattctcaactaaagttgttctaagccaaaccaggttcaatctcattctaagttatcatttaatctt 16185149  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  16185150 taataaacatc 16185160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 19976667 - 19976877
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| |||| ||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  19976667 taggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 19976766  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||| |||||||| ||||||||||||||| |  ||||||||| | ||| ||| | |||||| |||||||||||||||| ||||| |    
T  19976767 agagcatctgctcgccattgcgagtactagtcagattcccaactaatgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcat 19976866  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  19976867 taataaacatc 19976877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 229
Target Start/End: Complemental strand, 21168610 - 21168408
Alignment:
Q  27 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 126  Q
    |||||||||||  ||||||||||||||||||  |||||| |||||||||   |  ||||||||||||||  || ||||||| | | ||||| ||||||||    
T  21168610 attactacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatc 21168511  T
Q  127 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 226  Q
    |||||| ||||||||||||||| |||||||||||| | |||||||| | | ||| ||| | ||||||||||||||||||||||||||||||||| |||||    
T  21168510 tgctcgccatggcgagtacaagccagattcccaactaaagttgttcaaagctaaaccaggttcaatctcattctaagttatcatctaatctttaataaac 21168411  T
Q  227 atc 229  Q
    |||    
T  21168410 atc 21168408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 24755943 - 24756146
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||||||||| ||| |||||     
T  24755943 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcg 24756042  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  24756043 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 24756142  T
Q  219 tatt 222  Q
    ||||    
T  24756143 tatt 24756146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 19983315 - 19983525
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| ||||||||||||||| ||||||||||||||||  |||||| |||||||||   |  |||| ||||||||| || |||||||| ||| |||||     
T  19983315 taggtcacattactacccagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcg 19983414  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||  |||||||||||| ||||||||||||||| |  ||||||||| | ||| ||| | |||||| |||||||||||||||| ||||| |    
T  19983415 agagcatctgctcaccatggcgagtactagtcagattcccaactaatgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcat 19983514  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  19983515 taataaacatc 19983525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 30643188 - 30642978
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||    ||||| |||||||||   |  || ||||||| ||||||||||||||| ||| ||||||    
T  30643188 taggtcacattactacctaagggtccaaccctaatcaatttgtgcgaaacagatcgcaacatcctaacttgcattcaattctggaagtgctcgcgaggca 30643089  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||  |||| | |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  30643088 agagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 30642989  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  30642988 taataaacatc 30642978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 22010513 - 22010366
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||   |||||||||| | |||     
T  22010513 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaa 22010414  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | |||||||| |||||| | ||||||||||||||||||||||||    
T  22010413 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatc 22010366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 23776732 - 23776521
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagat-cgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 117  Q
    |||||| |||||||||| | | |||||||||||| ||||  |||||| |||||| |||  ||  ||  |||||||||| ||||| ||||| ||| |||||    
T  23776732 taggtcacattactacctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctgaaagtgctcgcgaggc 23776633  T
Q  118 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 217  Q
     ||||||||||||||  || ||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||||||||||||||||| ||||||    
T  23776632 gagagcatctgctcgcgatagcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatct 23776533  T
Q  218 ttattaaacatc 229  Q
    ||| ||| ||||    
T  23776532 ttaataatcatc 23776521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 20465873 - 20465726
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| | || ||||||| | |||     
T  20465873 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaagctgttctaagctaaa 20465774  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | |||||||| |||||||| ||||||||||||||| | ||||||    
T  20465773 ccaggttcaatctcgttctaagtcatcatctaatctttaattaacatc 20465726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 377500 - 377710
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||||| ||||||||  || || | ||||||| ||  |  |||| | ||||||| ||||||||||| ||| ||| |     
T  377500 taggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcacgacattctcattagcactcagttctggaagtgctcgcgagacg 377599  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| | |||| ||||| | ||| ||| | |||||||||||||||||||| || |||||||    
T  377600 agagcatctgctcgccatggcgagtacaagccagaattccaactaaagttattctaagctaaaccaggttcaatctcattctaagttataatttaatctt 377699  T
Q  219 tattaaacatc 229  Q
    ||  |||||||    
T  377700 taacaaacatc 377710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 19259432 - 19259288
Alignment:
Q  85 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 184  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||| |||||| |||| | ||||| |  ||||||||| | ||| |||    
T  19259432 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaatacaagccagaattccaactaaggttgttctaagctaaacca 19259333  T
Q  185 agctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     | | ||||||||||||||| ||||| ||||||||| ||||||||    
T  19259332 ggtttaatctcattctaagtcatcatttaatctttaataaacatc 19259288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 15602914 - 15602704
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||  | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  15602914 taggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcg 15602815  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||  |||||| | |||||||||||||    
T  15602814 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctt 15602715  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  15602714 taataaacatc 15602704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 15611366 - 15611156
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||  | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  15611366 taggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcg 15611267  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||  |||||| | |||||||||||||    
T  15611266 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctt 15611167  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  15611166 taataaacatc 15611156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 17926604 - 17926394
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| | ||||| ||| |||||| |||| ||| |||||     
T  17926604 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaatttgcattcagttctgggagtgctcgcgaggcg 17926505  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  17926504 agagcatctgctcgccatggcgagtacaagccataattccaacttaagttgttctaagataaaccaggttcaatctcgttctaaatcatcatctaatctt 17926405  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  17926404 taataaacatc 17926394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 23846842 - 23846771
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  23846842 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 23846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 15532166 - 15532255
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  15532166 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcggcatggcgagtacaagccagaatcccaactaaggttgttctaggtt 15532255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 24434065 - 24433976
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  24434065 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 24433976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 22113555 - 22113467
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22113555 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22113467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 22135058 - 22134970
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22135058 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22134970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 16410052 - 16409942
Alignment:
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||| |||| |||| | ||||| | |||| ||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  16410052 agagcatctgctcgccatggcgagttcaagccagaattccaactaaagttattctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 16409953  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  16409952 taataaacatc 16409942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 15538726 - 15538815
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  15538726 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 15538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 21161947 - 21161842
Alignment:
Q  27 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 126  Q
    |||||||||||  ||||||||||||||||||  || ||| |||||||||   |  |||||||||||||| ||||||||||| ||| ||||| ||||||||    
T  21161947 attactacccaaaggtccatctctaatcaaactatacgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatc 21161848  T
Q  127 tgctcg 132  Q
    ||||||    
T  21161847 tgctcg 21161842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 22166208 - 22166120
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| | | ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22166208 cactcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22166120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 20856252 - 20856121
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagct 188  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| |  ||||||||| | ||| ||| | |    
T  20856252 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattgcaactaaggttgttctaagctaaaccaggtt 20856153  T
Q  189 caatctcattctaagttatcatctaatcttta 220  Q
    ||||||  || ||| | |||||||||||||||    
T  20856152 caatcttgttttaaatcatcatctaatcttta 20856121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 16231304 - 16231214
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  16231304 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 16231214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 22028834 - 22028924
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||| | |||||||||||| || |||||||||||| |  ||||||| |||||    
T  22028834 tgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtactagccagattcccaactaaggttgttccaggtt 22028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 23834450 - 23834540
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||| ||||||||||| ||||||| |||| |  ||||||| |||||    
T  23834450 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatcgcgagtacaagccagattctcaactaaggttgttccaggtt 23834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 17828411 - 17828347
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  17828411 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 17828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 43252092 - 43252180
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  43252092 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 43252180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 17055214 - 17055128
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||| |||||| ||  || ||||| |  |||||||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgactacaagccaactttccaactaaggttgttctaggtt 17055128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 16861155 - 16861095
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| |||||||||||||||    
T  16861155 tgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaag 16861095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 22045145 - 22045225
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||| ||| ||||| |||||||||||||| |||| | |||||||| |||||||||||| |  ||||||| |||||    
T  22045145 tctggaagtgctcgcgaggcgagagcatctgctcgccatgacaagtacaagccagattcccaactaaggttgttccaggtt 22045225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 32598959 - 32599015
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| |||  |||| |||||||||||||| |||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaag 32599015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 32605491 - 32605547
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| |||  |||| |||||||||||||| |||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaag 32605547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 39094769 - 39094713
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  39094769 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 39094713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 18619756 - 18619845
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| |||| |||||||||| |||| | ||||  |  |||||||||||||    
T  18619756 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgacgagtacaagccagaattccaagtaaggttgttctaggtt 18619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 20527727 - 20527816
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  20527727 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 20527816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 30308582 - 30308493
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||  ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  30308582 gcactcagttctggaagtgctcgcgaggcgagagcattagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 30308493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 21972411 - 21972355
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 146  Q
    |||||||||||||||||| ||| | ||| |||||||||||||| | |||||||||||    
T  21972411 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21972355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 21976496 - 21976440
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 146  Q
    |||||||||||||||||| ||| | ||| |||||||||||||| | |||||||||||    
T  21976496 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21976440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 21161837 - 21161802
Alignment:
Q  194 tcattctaagttatcatctaatctttattaaacatc 229  Q
    ||||||||||||||||||||||||||| ||||||||    
T  21161837 tcattctaagttatcatctaatctttaataaacatc 21161802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 22875385 - 22875432
Alignment:
Q  113 gaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaa 160  Q
    ||||| ||||| ||||||||||||||||||| || |||||||||||||    
T  22875385 gaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaa 22875432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 19278110 - 19278023
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| | |||| |||||||| ||  || ||||| |  |||||||||||||    
T  19278110 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggc-agtacaagccaactttccaactaaggttgttctaggtt 19278023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 48357 - 48147
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| || |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  48357 taggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttacttgcactcagttctggaagtgctcgcgaggcg 48258  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  48257 agagcatctgctcgccatggcgagtacaagccagattcctaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 48158  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  48157 taatatacatc 48147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 115; Significance: 1e-58; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 70018 - 70228
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  70018 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 70117  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  | ||||||||||||| ||| | |||||||| |||||||||||||| |||||||    
T  70118 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggctgttctaggttaaaccaggttcaatctcgttctaagttatcatttaatctt 70217  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  70218 taatatacatc 70228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 10413 - 10323
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  10413 tgcactcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 10323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 58246 - 58157
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  58246 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 58157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 20205 - 20406
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||  | |||  |||||||||||||| ||||||||||| ||| |||||     
T  20205 taggtctcattactacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggcg 20304  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  20305 agagcatctgctcgccatgacgagtacaactcagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 20404  T
Q  219 ta 220  Q
    ||    
T  20405 ta 20406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 26704291 - 26704498
Alignment:
Q  22 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 121  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||| ||||||| | ||   || ||||||||||| ||||||||||| ||| ||||| | |    
T  26704291 gtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaa 26704390  T
Q  122 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttat 221  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||     
T  26704391 gcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaa 26704490  T
Q  222 taaacatc 229  Q
    ||| ||||    
T  26704491 taagcatc 26704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 26974024 - 26974231
Alignment:
Q  22 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 121  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||| ||||||| | ||   || ||||||||||| ||||||||||| ||| ||||| | |    
T  26974024 gtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaa 26974123  T
Q  122 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttat 221  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||     
T  26974124 gcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaa 26974223  T
Q  222 taaacatc 229  Q
    ||| ||||    
T  26974224 taagcatc 26974231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 37724126 - 37724327
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||| ||||||| | |||||||||||||||||||  |||||| |||||||||  |   |||||||||||||| ||||||||||| ||| |||||     
T  37724126 taggtctcaatactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaagtgctcgcgaggcg 37724225  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||| || ||||||||||||||  ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  37724226 agagcatctgctcgccatggcgagtaccagccagattcccaacaaatgttgttctaagttaaaccaggttcaatctcattctaagttatcatttaatctt 37724325  T
Q  219 ta 220  Q
    ||    
T  37724326 ta 37724327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 14079370 - 14079561
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| |||| |||||| ||| |||||     
T  14079370 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctagaagtgctcgcgaggcg 14079469  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcat 210  Q
    ||||||| |||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||||||||||    
T  14079470 agagcatttgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcat 14079561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 22032538 - 22032748
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||||||||||||  || || | ||| ||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  22032538 taggtctcattactacctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 22032637  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  22032638 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 22032737  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  22032738 taataaacatc 22032748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 229
Target Start/End: Original strand, 23512339 - 23512539
Alignment:
Q  29 tactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctg 128  Q
    ||||||||| ||||||| |||||||||||  |||||| |||||||||   |  || || |||||||| ||||||||||| ||| ||||| ||||||||||    
T  23512339 tactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtgctcgcgaggcgagagcatctg 23512438  T
Q  129 ctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacat 228  Q
    |||| ||||||||||||||| ||||||  |||| | |||||||||| | ||| ||| | ||||||||| ||||||| ||||||||||||||| |||||||    
T  23512439 ctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacat 23512538  T
Q  229 c 229  Q
    |    
T  23512539 c 23512539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 23201590 - 23201792
Alignment:
Q  19 taggtctcattactaccc-aggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 117  Q
    |||||||||||||||||| | |||||||||||||| ||||  |||||| |||||||||  ||  |||||||||||||| ||||  ||||| ||| |||||    
T  23201590 taggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcacttgcactcagttctaaaagtgctcgcgaggc 23201689  T
Q  118 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 217  Q
     |||||||||||||| ||||||||||||| | |||||||||||| |  |||||| || | ||| ||| | ||||||||||| ||||||||||| ||||||    
T  23201690 gagagcatctgctcgccatggcgagtacaggccagattcccaactaatgttgttataagctaaaccaggttcaatctcattataagttatcatttaatct 23201789  T
Q  218 tta 220  Q
    |||    
T  23201790 tta 23201792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 18769901 - 18769691
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  ||||||||| |||| ||||||||||| ||| || ||     
T  18769901 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctcagttctggaagtgctcgcgacgcg 18769802  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| || |||||||||||| |||| ||| ||| | | |||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  18769801 agagcatctgctcgccacggcgagtacaagccagaatcctaactaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 18769702  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  18769701 taataaacatc 18769691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 23501242 - 23501032
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| ||||||||||||||||||   || ||| |||||||||   |  ||||||| |||||| ||||||||||| ||| ||||      
T  23501242 taggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcactttcactcagttctggaagtgctcgcgaggtg 23501143  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | ||||||||  |||||| |||||| |||| ||    
T  23501142 agagcatctgctcgccatggcgagtacaagcaagattcccaactaatgttgttctaagctaaaccaggttcaatctcggtctaagctatcatttaatatt 23501043  T
Q  219 tattaaacatc 229  Q
    || ||| ||||    
T  23501042 taataagcatc 23501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 23572364 - 23572502
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||| |||||||||||  || ||||| |||||||||||||| ||||| ||||||||| |||| ||||||| | |||||||||| | |||     
T  23572364 ctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcgccatggggagtacaagccagaatcccaactaaagttgttctaagctaaa 23572463  T
Q  182 ccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    ||| | ||||||||||||||||||||||| |||||||||    
T  23572464 ccaggttcaatctcattctaagttatcatttaatcttta 23572502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 21366563 - 21366353
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  21366563 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 21366464  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | |||  || | |||||||| |||||| | |||||||||||||    
T  21366463 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctt 21366364  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  21366363 taataaacatc 21366353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 21887124 - 21887256
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 196  Q
    ||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||  || | ||| |||||    
T  21887124 ttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaagcaggttcattctca 21887223  T
Q  197 ttctaagttatcatctaatctttattaaacatc 229  Q
    |||||||||||||| ||||||||| ||||||||    
T  21887224 ttctaagttatcatttaatctttaataaacatc 21887256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 20805837 - 20805979
Alignment:
Q  87 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 186  Q
    ||||| ||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| |    
T  20805837 ttgcattcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaaccagg 20805936  T
Q  187 ctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     |||||||| |||||| | ||||||||||||||| ||||||||    
T  20805937 ttcaatctcgttctaaatcatcatctaatctttaataaacatc 20805979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 23535418 - 23535328
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |  ||||||| |||||    
T  23535418 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagattcccaactaaggttgttccaggtt 23535328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 21873471 - 21873595
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||| ||||||||||||||  |||||| ||||||| |  ||  || ||||||||||| ||||| ||||| ||| |||||     
T  21873471 taggtcacattactacccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcg 21873570  T
Q  119 agagcatctgctcgtcatggcgagt 143  Q
    |||||||||||||| ||||||||||    
T  21873571 agagcatctgctcgccatggcgagt 21873595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 17410724 - 17410814
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  17410724 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 17410814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 20910629 - 20910539
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  20910629 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 20910539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 18356604 - 18356677
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  18356604 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 18356677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 21885016 - 21884928
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  21885016 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 21884928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 21340595 - 21340506
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  21340595 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 21340506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 26665959 - 26665870
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26665959 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 26937556 - 26937467
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26937556 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26937467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 19472546 - 19472458
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||| || ||||| |  |||||||||||||    
T  19472546 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccagctttccaactaaggttgttctaggtt 19472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 26172743 - 26172811
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccc 158  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||    
T  26172743 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttccc 26172811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 1858805 - 1858746
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaa 147  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  1858805 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaa 1858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 23451634 - 23451724
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23451634 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23451724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 23463139 - 23463229
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23463139 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23463229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 123133 - 123076
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 146  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  123133 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 123076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 16674430 - 16674519
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||| |  ||||||| |||||    
T  16674430 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaactaaggttgttccaggtt 16674519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 20232828 - 20232917
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||| ||| |  ||||||| |||||    
T  20232828 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcctaactaaggttgttccaggtt 20232917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 31342403 - 31342524
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 196  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||||||| ||   |||||  ||||| |  ||||||||| | ||| ||| | |||||||||    
T  31342403 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagttcagcccagatctccaactaaggttgttctaagctaagccaggttcaatctca 31342502  T
Q  197 ttctaagttatcatctaatctt 218  Q
    ||||| |||||||| |||||||    
T  31342503 ttctaggttatcatttaatctt 31342524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 17918979 - 17918907
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || |||||    
T  17918979 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaac 17918907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 20296127 - 20296215
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  20296127 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 20296215  T

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Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 23458878 - 23458968
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| |||| |||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23458878 tgcactcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23458968  T

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Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 12028393 - 12028304
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  12028393 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 12028304  T

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Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 17718259 - 17718182
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 174  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| |  |||||||||    
T  17718259 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgttcta 17718182  T

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Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 24222174 - 24222255
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  24222174 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 24222255  T

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Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 24532876 - 24532787
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||  ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  24532876 gcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 24532787  T

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Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 18774490 - 18774554
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| |||||||    
T  18774490 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaac 18774554  T

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Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 26742574 - 26742502
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||| ||||| || |||||| ||||| |||||||| ||||| ||||||||||||||| |||||| |||||    
T  26742574 gcactcagttctgaaaatggtcgcgaggcgagagcatcagctcgccatggcgagtacaagccagatttccaac 26742502  T

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Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 42805698 - 42805762
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||| |||||||||| ||||    
T  42805698 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagccaga 42805762  T

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Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 25229233 - 25229170
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  25229233 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 25229170  T

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Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 25293389 - 25293326
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  25293389 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 25293326  T

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Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 21295091 - 21295002
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  21295091 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 21295002  T

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Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 25535266 - 25535355
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  25535266 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 25535355  T

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Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 26680868 - 26680957
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  26680868 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 26680957  T

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Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 26952475 - 26952564
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  26952475 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 26952564  T

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Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 18784336 - 18784397
Alignment:
Q  100 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||| ||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| |||||||    
T  18784336 tggacgtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaac 18784397  T

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Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 23038257 - 23038467
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||  |   |||||||||||||| ||||||||||| ||  |||||     
T  23038257 taggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcacttgcactcagttctggaagtgctcacgaggcg 23038356  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||| |||| ||| | ||||||||||||||||||||||| |||||||    
T  23038357 agagcatctgctcgccatggcgggtacaagccagattcccaacaatggttgttctagcttaaaccaggttcaatctcattctaagttatcatttaatctt 23038456  T
Q  219 tattaaacatc 229  Q
    || ||| ||||    
T  23038457 taataagcatc 23038467  T

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Target: chr2; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 22799023 - 22798813
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||  ||  || ||||||||| | ||||||||||| ||| |||||     
T  22799023 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcg 22798924  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | || ||||||| | ||| ||| | |||||||| ||||||||||||||||||||||    
T  22798923 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagctgttctaagctaaaccaggttcaatctcgttctaagttatcatctaatctt 22798824  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  22798823 taataaacatc 22798813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 22740857 - 22740647
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  22740857 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 22740758  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||  ||||||||| ||||| | | | |||||||| |||||||||||||| |||||||    
T  22740757 agagcatctgctcgccgtggcgagttcaagccagattcccaacaaaggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctt 22740658  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  22740657 taatatacatc 22740647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 40622105 - 40621904
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  40622105 taggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 40622006  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| | |||||||||| | ||  ||| | |||||||| |||||||||||||| |||||||    
T  40622005 agagcatctgctcgccatggcgagtacaagccagaattccaactaaagttgttctaagctataccaggttcaatctcgttctaagttatcatttaatctt 40621906  T
Q  219 ta 220  Q
    ||    
T  40621905 ta 40621904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 22758612 - 22758402
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||| ||||| ||  |||||     
T  22758612 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 22758513  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | | || ||  |||||||||||||| |||||||    
T  22758512 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaactaggttgaagcttgttctaagttatcatgtaatctt 22758413  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  22758412 taatatacatc 22758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 23019603 - 23019393
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| ||||||| ||||||| |||  |||||| |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  23019603 taggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgacttgcactcagttctggaagtgctcgcgaggcg 23019504  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    ||||||||| |||| |||||| |||||||| |||||||||||| | ||||||||||   ||  ||| | ||||||||| ||||||| |||||||||||||    
T  23019503 agagcatctactcgccatggcaagtacaagccagattcccaactaaagttgttctaacctagaccaggttcaatctcactctaagtcatcatctaatctt 23019404  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  23019403 taataaacatc 23019393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 229
Target Start/End: Complemental strand, 23101092 - 23100917
Alignment:
Q  54 caaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||| ||||||| | ||||||| |||  |||||||||||||| || |||||||| ||| ||||| |||||||||||||| |||||||| ||||||  |||    
T  23101092 caaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagctaga 23100993  T
Q  154 ttcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||||||||| | ||||||||||||||| ||| | ||||||||||||||||||||||| |||| |||| ||| ||||    
T  23100992 ttcccaacagtggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatttttaataagcatc 23100917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 45678052 - 45677842
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| ||||||| |   |  |||| ||||||||| ||||||||||| ||  |||||     
T  45678052 taggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcactcagttctggaagtgctcacgaggcg 45677953  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  45677952 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 45677853  T
Q  219 tattaaacatc 229  Q
    || ||| ||||    
T  45677852 taataatcatc 45677842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 25963614 - 25963404
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   ||| || |||||||||   | ||| ||||||| ||||||||||||||| ||| |||||     
T  25963614 taggtcacattactacctaagggtccaaccctaatcaacttatgagaaacagatcgcaacatactaacttgcattcaattctggaagtgctcgcgaggcg 25963515  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  25963514 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 25963415  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  25963414 taataaacatc 25963404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 37524886 - 37525096
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| |  |||||||   ||| || |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  37524886 taggtcacattactacctaagggtccaaccttaatcaacttatgtgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 37524985  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  37524986 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 37525085  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  37525086 taataaacatc 37525096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 24673864 - 24674008
Alignment:
Q  85 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 184  Q
    ||||||| ||| || |||||||| ||| ||||| |||||||||||||| |||||||| |||||| |||||||||||| |  ||||||||| | ||| |||    
T  24673864 acttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagccagattcccaactaatgttgttctaagctaaacca 24673963  T
Q  185 agctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     | |||||||||||||| |||||||| ||||||| | ||||||||    
T  24673964 ggttcaatctcattctaggttatcatttaatcttcaataaacatc 24674008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 21918213 - 21918003
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| |  |||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  21918213 taggtcacattactacctaagggtccaaccataatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 21918114  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||| | | ||| ||| | |||||||  |||||||| |||||||||||||    
T  21918113 agagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcaaagctaaaccaggttcaatctagttctaagtcatcatctaatctt 21918014  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  21918013 taataaacatc 21918003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 15477883 - 15477971
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |   ||||||||||||    
T  15477883 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaagattgttctaggtt 15477971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 19928329 - 19928261
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccc 158  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||    
T  19928329 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 19928261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 22461018 - 22460929
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  22461018 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 22460929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 19688585 - 19688495
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| || || |||||||||||| ||||||||||||||||| |||||| ||||| |  ||||||| |||||    
T  19688585 tgcactcagttctggaagtgctcgcgatgcgagagcatctgcttgtcatggcgagtacaagccagatttccaactaaggttgttccaggtt 19688495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 24735680 - 24735770
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||| ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  24735680 tgcaatcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaggttgttccaggtt 24735770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 12901339 - 12901251
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12901339 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12901251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 24649636 - 24649724
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  24649636 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 24649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 27379259 - 27379171
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27379259 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27379171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 27383305 - 27383217
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27383305 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27383217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 27602076 - 27602134
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  27602076 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 27602134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 18855289 - 18855200
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||  ||||| ||||||| |||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  18855289 gcactcagttctggaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttctaggtt 18855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 23187353 - 23187442
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  23187353 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 23187442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 23598616 - 23598705
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  23598616 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 23598705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 24655158 - 24655077
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  24655158 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 24655077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 24870177 - 24870258
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||  ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || |||||||||||||    
T  24870177 ttctggaagtgctcatgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttctaggtt 24870258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 22811713 - 22811621
Alignment:
Q  137 ggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    |||||||||||| |||| ||||||| |  ||||||||| | ||| ||| | |||||||| |||||| | ||||||||||||||| ||||||||    
T  22811713 ggcgagtacaagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatc 22811621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 24628305 - 24628217
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  24628305 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 24628217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 26125484 - 26125540
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| | | ||||| |||||||||||||| |||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaag 26125540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 41530836 - 41530780
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 146  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||    
T  41530836 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtaca 41530780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 41667230 - 41667286
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| | | ||||| |||||||||||||| |||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaag 41667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 24175097 - 24175178
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  24175097 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 24175178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 61094 - 61182
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| ||||||||||| ||| |||||  ||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  61094 cactcagttctggaagtgctcgcgaggcgggagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 61182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 24716345 - 24716285
Alignment:
Q  102 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaaca 162  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||    
T  24716345 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaaca 24716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 25961354 - 25961306
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  25961354 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 25961306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 21327393 - 21327330
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||||| |||||| |||| ||| ||||| || ||||||||||| ||||||||||||||| ||||    
T  21327393 cactcagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccaga 21327330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 44370133 - 44370062
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||| ||||||||| |||| |||||| | | ||||| |||||||||||||| |||||| |||||||| ||||    
T  44370133 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccaga 44370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 23103293 - 23103255
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaa 57  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  23103293 taggtctcattactaccaaagggtccatctctaatcaaa 23103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 21318455 - 21318399
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||||| |||| ||| ||||| || ||||||||||| ||||||||||||||| ||||    
T  21318455 ttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccaga 21318399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 24658032 - 24658072
Alignment:
Q  189 caatctcattctaagttatcatctaatctttattaaacatc 229  Q
    |||||||||||||||||||||| ||||| ||| ||||||||    
T  24658032 caatctcattctaagttatcatttaatcattaataaacatc 24658072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 40428762 - 40428810
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||| |||||    
T  40428762 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtac 40428810  T

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Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 15877725 - 15877524
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  15877725 taggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 15877626  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | |||||||| | |||||||||||| |||||||    
T  15877625 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcgtcctaagttatcatttaatctt 15877526  T
Q  219 ta 220  Q
    ||    
T  15877525 ta 15877524  T

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Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 220
Target Start/End: Original strand, 23408664 - 23408855
Alignment:
Q  29 tactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctg 128  Q
    ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||| | ||||||||||| ||| ||||| ||||||||||    
T  23408664 tactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcgagagcatctg 23408763  T
Q  129 ctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    |||| |||||||||||||||  |||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  23408764 ctcgccatggcgagtacaagcaagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatcttta 23408855  T

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Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 16369692 - 16369839
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||| ||||||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | |||     
T  16369692 ctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 16369791  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | ||||||| ||||||||||||||| ||||||||| ||||||||    
T  16369792 ccaggttcaatcttattctaagttatcatttaatctttaataaacatc 16369839  T

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Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 15060513 - 15060723
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| || ||||||| | ||||||||| ||||||||  ||||||| |||||||||   |  || ||||||| ||| | ||||||||| ||| |||||     
T  15060513 taggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcg 15060612  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  15060613 agagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 15060712  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  15060713 taataaacatc 15060723  T

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Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 12173073 - 12173217
Alignment:
Q  85 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 184  Q
    ||||||| ||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| | |||||||||| | ||| |||    
T  12173073 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaataccaactaaagttgttctaagctaaacca 12173172  T
Q  185 agctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     | ||||||||||||||||| ||||||||||||||| ||||||||    
T  12173173 ggttcaatctcattctaagtcatcatctaatctttaataaacatc 12173217  T

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Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 856357 - 856567
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  856357 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 856456  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||  ||||||||||| |||| | ||||| | | |||||||| | |||  || | ||||||||||||||||||||||| |||||||    
T  856457 agagcatctgctcgccaaagcgagtacaagccagaataccaactaaaattgttctaagctaaaacaggttcaatctcattctaagttatcatttaatctt 856556  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  856557 taataaacatc 856567  T

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Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 12496476 - 12496686
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  12496476 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 12496575  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  12496576 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 12496675  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  12496676 taataaacatc 12496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 18383814 - 18383604
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| |||| |||||| ||| |||||     
T  18383814 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttcttgaagtgctcgcgaggcg 18383715  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  18383714 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 18383615  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  18383614 taataaacatc 18383604  T

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Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 14878396 - 14878192
Alignment:
Q  26 cattactacccagggg-tccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagca 124  Q
    |||||||||| ||||| ||||||||||||||||  |||||| |||||||||  ||  |||| | ||||||  ||||||||||| ||  ||||| ||| ||    
T  14878396 cattactacctagggggtccatctctaatcaaattatgcgacacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaaca 14878297  T
Q  125 tctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaa 224  Q
    |||||||| |||||||||||| || |||| | ||||| | |||| ||||| | ||| ||| | ||||||||| ||||||| ||||||||||||||| |||    
T  14878296 tctgctcgccatggcgagtacgagccagaattccaactaaagttattctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataa 14878197  T
Q  225 acatc 229  Q
    |||||    
T  14878196 acatc 14878192  T

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Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 19725807 - 19725599
Alignment:
Q  21 ggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaag 120  Q
    |||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   |  || ||||| | ||| ||||||||||| ||| ||||| ||    
T  19725807 ggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatcctaacttgtattcagttctggaagtgctcgcgaggcgag 19725708  T
Q  121 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    |||||||||||| |||||||||||||||||||| ||||||| |  ||||||||| | ||| ||| | |||||||| |||||  | |||||||||||||||    
T  19725707 agcatctgctcgccatggcgagtacaagtcagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctagatcatcatctaatcttta 19725608  T
Q  221 ttaaacatc 229  Q
    || ||||||    
T  19725607 ttcaacatc 19725599  T

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Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 174
Target Start/End: Complemental strand, 23052967 - 23052819
Alignment:
Q  26 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 125  Q
    |||||||||||||||||||||||||||||||   |||||| |||| |||    |  |||||||||| ||||||||| ||||| ||| ||||| |||||||    
T  23052967 cattactacccaggggtccatctctaatcaagttatgcgacacaggtcgtaacatcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcat 23052868  T
Q  126 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 174  Q
    ||||||| ||||||||||||||| |||||||||||| |  |||||||||    
T  23052867 ctgctcgccatggcgagtacaagccagattcccaactaaggttgttcta 23052819  T

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Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 11298426 - 11298216
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | |||||||||  ||| || |||||||||   | ||| | ||||| ||||||||||||||| ||| |||||     
T  11298426 taggtcacattactacctaagggtccaaccctaatcaaattatgagaaacagatcgcaacatactaaattgcattcaattctggaagtgctcgcgaggcg 11298327  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||| ||| ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| | |||||||  |||||| | | |||||||||||    
T  11298326 agagcatctgatcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaaccaggttcaatcttgttctaaatcagcatctaatctt 11298227  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  11298226 taataaacatc 11298216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 15051737 - 15051947
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| || ||||||| | ||||||||| ||||||||  ||||||| ||||||| |   |  || ||||||| ||| | || |||||| ||| |||||     
T  15051737 taggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcacaacatcctaacttgcattcagtcctagaagtgctcgcgaggcg 15051836  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | || || |  ||||||||| | ||||||| | |||||||||||||||||||| || |||||||    
T  15051837 agagcatctgctcgccatggcgagtacaagccagaattccgactaaggttgttctaagctaatccaggttcaatctcattctaagttataatttaatctt 15051936  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  15051937 taataaacatc 15051947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 23077375 - 23077165
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||| |||||||||   |  |||| ||| | ||  ||||||||||| ||| |||||     
T  23077375 taggtctcattactacctaagggtccatctctaatcaaattatgcgacacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcg 23077276  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||||||  ||| | |||||   |||||||||| | ||| | | | ||||||||| |||  || |||||||||||||    
T  23077275 agagcatctgctcgccatggcgagtacaagctagaattccaacctaagttgttctaagctaaactaggttcaatctcactctgtgtcatcatctaatctt 23077176  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  23077175 taataaacatc 23077165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 322810 - 323020
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| | |||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  322810 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaatagatcgcaacatactaacttgcatttagttctggaagtgctcgcgaggcg 322909  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||| ||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  322910 agagcatctgctcgccatggtgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 323009  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  323010 taataaacatc 323020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 7793175 - 7793085
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  7793175 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 7793085  T

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Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 26190843 - 26190696
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||   ||||||| || | |||     
T  26190843 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactcaagttgttataagctaaa 26190744  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | |||||||  |||||||| | ||||| ||||||| ||||||||    
T  26190743 ccaggttcaatcttgttctaagtcagcatcttatctttaataaacatc 26190696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 12037787 - 12037649
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| | | | |     
T  12037787 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatggcgagtacaagccagaattccaactaatgttgttcaaagcttaa 12037688  T
Q  182 ccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    ||| | |||||||||||||||||  ||||||||||||||    
T  12037687 ccaggttcaatctcattctaagtcttcatctaatcttta 12037649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 15849914 - 15849824
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  15849914 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaccaaggttgttccaggtt 15849824  T

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Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 16797883 - 16797793
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  16797883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttcgaggtt 16797793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 326992 - 326903
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  326992 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 326903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 1598308 - 1598219
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  1598308 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 1598219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 3833952 - 3834041
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| |||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  3833952 gcactcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaaccaaggttgttctaggtt 3834041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 11300339 - 11300250
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11300339 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11300250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 17525049 - 17524948
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| || |||||||| ||| ||||||    
T  17525049 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggca 17524950  T
Q  119 ag 120  Q
    ||    
T  17524949 ag 17524948  T

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Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 2897652 - 2897562
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | ||||||||||| ||| ||||| ||||||||||||||||||| |||||||||| |||||||||||| |  ||||||| |||||    
T  2897652 tgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgtcatgtcgagtacaagccagattcccaactaaggttgttccaggtt 2897562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 15482939 - 15483029
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||| |  ||||||| |||||    
T  15482939 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccaaactaaggttgttccaggtt 15483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 16808710 - 16808620
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  16808710 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttcgaggtt 16808620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 16909971 - 16910105
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||||| ||||||||  || || | |||||||  |  |  |||||||||||||| |||| |||||| ||| |||||     
T  16909971 taggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcatgacattctcacttgcactcagttctagaagtgctcgcgaggcg 16910070  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcaga 153  Q
    |||||||||||||| ||||||||||||||| ||||    
T  16910071 agagcatctgctcgccatggcgagtacaagccaga 16910105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 20461329 - 20461239
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||| |  ||||||| |||||    
T  20461329 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcctaactaaggttgttccaggtt 20461239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 15941732 - 15941643
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  15941732 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactacggttgttctaggtt 15941643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 17242250 - 17242339
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  17242250 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 17242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 38814662 - 38814751
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  38814662 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 38814751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 1982636 - 1982549
Alignment:
Q  91 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  1982636 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 1982549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 20723242 - 20723368
Alignment:
Q  52 atcaaaacatgcgatacagatcgcgttaa-actcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtc 150  Q
    |||||||||||||| |||||||||   || ||||| | |||||| | |||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| |    
T  20723242 atcaaaacatgcgacacagatcgcacaaacactcaat-gcactccaatctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagcc 20723340  T
Q  151 agattcccaacaatagttgttctaggtt 178  Q
    || |||||||| |  |||||||||||||    
T  20723341 agcttcccaactaatgttgttctaggtt 20723368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 15617656 - 15617714
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  15617656 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaag 15617714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 31097383 - 31097310
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| |||||   |||||||||||| ||||||||||||||| ||||||||||||    
T  31097383 tgcactcagttctggaagtgctcgcgaggcggtagcatctgctcgccatggcgagtacaagccagattcccaac 31097310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 7109981 - 7110069
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  7109981 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 7110069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 7113916 - 7114004
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  7113916 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 7114004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 11863078 - 11863217
Alignment:
Q  85 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 184  Q
    |||||||||||||| |||||||  |   ||||| |||||||||||||| |||||||||| |||| |||| | ||||| | ||| |||||| | ||| |||    
T  11863078 acttgcactcaattttggaagtacttacgaggcgagagcatctgctcgccatggcgagttcaagccagaattccaactaaagtagttctaagctaa-cca 11863176  T
Q  185 agctcaatctcattctaagttatcatctaatctttattaaa 225  Q
     | |||||||| |||||| | ||||||||||||||| ||||    
T  11863177 ggttcaatctcgttctaaatcatcatctaatctttaataaa 11863217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 16697071 - 16697159
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  16697071 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagctttccaactaaggttgttccaggtt 16697159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 22337002 - 22337090
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22337002 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22337090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 27409470 - 27409382
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27409470 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27409382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 11594967 - 11594878
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  11594967 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 11594878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 42326222 - 42326311
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  42326222 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 42326311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 11851860 - 11851999
Alignment:
Q  85 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 184  Q
    ||||||||| | ||||||||||| |   ||||| |||||||||| ||| |||||||||| |||| |||| | ||||| | ||||||| || | ||| |||    
T  11851860 acttgcacttagttctggaagtgcttacgaggcgagagcatctgatcgccatggcgagttcaagccagaattccaactaaagttgttataagctaa-cca 11851958  T
Q  185 agctcaatctcattctaagttatcatctaatctttattaaa 225  Q
     | |||||||| |||||| | ||||||||||||||| ||||    
T  11851959 ggttcaatctcgttctaaatcatcatctaatctttaataaa 11851999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 11855015 - 11855103
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| |||||||  || ||| ||||  |||||||||||||| ||||||||||||||| ||| |||||||| || ||||||| |||||    
T  11855015 cactcagttctggatttgctcgcgaggtgagagcatctgctcgccatggcgagtacaagccagcttcccaactatggttgttccaggtt 11855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 16690498 - 16690586
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||| ||| ||| || ||||| |  ||||||| |||||    
T  16690498 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaaaagccagctttccaactaaggttgttccaggtt 16690586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 22321947 - 22322035
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22321947 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 321779 - 321701
Alignment:
Q  151 agattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||| ||||| ||||||||    
T  321779 agattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaacctttaataaacatc 321701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 3402775 - 3402694
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  3402775 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactacggttgttccaggtt 3402694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 24188055 - 24188144
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  24188055 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 24188144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 55149256 - 55149345
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||  ||  |||||||| |  |||||||||||||    
T  55149256 gcactcaaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaatccaacttcccaactaatgttgttctaggtt 55149345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 28950007 - 28950065
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||  | ||| |||||||||||||| | |||||||||||||    
T  28950007 cactcaattctggaagtgctcacggggcgagagcatctgctcgccgtggcgagtacaag 28950065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 839533 - 839613
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||| ||| ||||| |||| |||| |||| |||||||||| |||||||  | |||||| |  |||||||||||||    
T  839533 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagtcaactccccaactaatgttgttctaggtt 839613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 11557204 - 11557156
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||    
T  11557204 ttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtac 11557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 36680 - 36890
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||| ||||||| |||| ||||||| ||||||||  ||   |||||||||||||| |||| |||||| ||| |||||     
T  36680 taggtctcattactacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggcg 36779  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  36780 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatctt 36879  T
Q  219 tattaaacatc 229  Q
    || ||| ||||    
T  36880 taataagcatc 36890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 8854 - 8653
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| |||| ||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  8854 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggtcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 8755  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | |||||||| |||||||||||||| |||||||    
T  8754 agagcatctgctcgccatggcgagtacaagccagattcccaacaaatgttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctt 8655  T
Q  219 ta 220  Q
    ||    
T  8654 ta 8653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 65690 - 65484
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| | |||||||  ||  |||||||||||||| ||||||||||| ||  |||||     
T  65690 taggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaagtgctcacgaggcg 65591  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||| ||| | |||||||  |||||||||||||| |||||||    
T  65590 agagcatctgctcgccatggcgagtacaagccagatccccaacaaaggttgttctaggttaaaccaggttcaatcttgttctaagttatcatttaatctt 65491  T
Q  219 tattaaa 225  Q
    || ||||    
T  65490 taataaa 65484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 53842 - 53932
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  53842 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 53932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 174989 - 175187
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||| ||   |||||||| ||||  ||||||||||| ||| ||||      
T  174989 taggtctcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaagtgctcgcgaggtg 175088  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 217  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||    
T  175089 agagcatctgctcgcaatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatct 175187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 1562 - 1772
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  1562 taggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 1661  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||| |||||||||| |||| |||||||||  ||||||||||||| | ||| | ||||| || |||||||||||| | |||||||    
T  1662 agagcatctgctcgccatgacgagtacaagccagactcccaacaaaggttgttctaggtttaaccaggttcaatgtctttctaagttatcctttaatctt 1761  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  1762 taataaacatc 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 13569734 - 13569935
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| ||||| |||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  13569734 taggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 13569833  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  13569834 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 13569933  T
Q  219 ta 220  Q
    ||    
T  13569934 ta 13569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 15093995 - 15094205
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||||| |||||||||  ||  || ||||||||||| || |||||||| ||| |||||     
T  15093995 taggtcacattactaaccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggcg 15094094  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| | |||||||||| | ||  ||| | |||||||||||| ||||||||||||||||||    
T  15094095 agagcatcagctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctataccaggttcaatctcattccaagttatcatctaatctt 15094194  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  15094195 taataaacatc 15094205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 44675854 - 44676064
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| |||||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| ||||      
T  44675854 taggtcacattactacctaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtg 44675953  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||| |||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  44675954 agagcatctgctcgccatggggagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 44676053  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  44676054 taataaacatc 44676064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 12570243 - 12570449
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||||||||| ||| |||||     
T  12570243 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcg 12570342  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  12570343 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 12570442  T
Q  219 tattaaa 225  Q
    || ||||    
T  12570443 taataaa 12570449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 15121637 - 15121490
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||||||||| | |||||||||| | |||     
T  15121637 ctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 15121538  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | ||||||||| ||||||| ||||||||||||||| ||||||||    
T  15121537 ccaggttcaatctcactctaagtcatcatctaatctttaataaacatc 15121490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 220
Target Start/End: Complemental strand, 15125042 - 15124850
Alignment:
Q  28 ttactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatct 127  Q
    |||||||||||||||||| |||||| ||||  |||||| ||| ||||   ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  15125042 ttactacccaggggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatct 15124943  T
Q  128 gctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    ||| | ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | |||||||| |||||||||||||| |||||||||    
T  15124942 gcttgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcgttctaagttatcatttaatcttta 15124850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 23843700 - 23843911
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||| ||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  23843700 taggtcacattaccacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 23843799  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctc-aatctcattctaagttatcatctaatct 217  Q
    |||||||||||||| ||||||||||||||| ||||||  |||| |  ||||||||| | ||| ||| | || |||||||||| |||||||||| |||||     
T  23843800 agagcatctgctcgccatggcgagtacaagccagattttcaactaatgttgttctaagctaaaccaggttcaaatctcattccaagttatcatttaatca 23843899  T
Q  218 ttattaaacatc 229  Q
    ||| | ||||||    
T  23843900 ttaatgaacatc 23843911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 16356850 - 16356640
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  16356850 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 16356751  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | ||| |   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  16356750 agagcatctgctcgccatggcgagtacaagccagaattccagcttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 16356651  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  16356650 taataaacatc 16356640  T

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Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 16487968 - 16487765
Alignment:
Q  26 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 125  Q
    |||||||||| | ||||||||| | ||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| ||||| |||||||    
T  16487968 cattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcat 16487869  T
Q  126 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 225  Q
    ||||||| ||||||||||||||| |||| | ||||| | ||| |||||| | |||  || | |||||||| |||||| | ||||||||||||||| ||||    
T  16487868 ctgctcgccatggcgagtacaagccagaattccaactaaagtggttctaagctaaaacaggttcaatctcgttctaaatcatcatctaatctttaataaa 16487769  T
Q  226 catc 229  Q
    ||||    
T  16487768 catc 16487765  T

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Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 9556809 - 9556897
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  9556809 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 9556897  T

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Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 16243227 - 16243139
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||| ||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  16243227 cactgaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 16243139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 36133791 - 36133701
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  36133791 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 36133701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 18222205 - 18222117
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  18222205 cactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 18222117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 16678415 - 16678328
Alignment:
Q  91 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | |||||||| |||||    
T  16678415 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttcaaggtt 16678328  T

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Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 1951590 - 1951517
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| || || |||||||||||||| ||||||||||||||| ||||||||||||    
T  1951590 tgcactcagttctggaagtgctcgcgaagcgagagcatctgctcgccatggcgagtacaagccagattcccaac 1951517  T

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Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 15353134 - 15353045
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| || ||||||| |||||    
T  15353134 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactatggttgttccaggtt 15353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 45938433 - 45938514
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  45938433 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 45938514  T

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Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 2015057 - 2015145
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| ||||| |||||||  ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  2015057 cactcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatggcgagtacaagccagattcccaactaaggttgttccaggtt 2015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 19757427 - 19757340
Alignment:
Q  91 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  19757427 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 19757340  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 19782379 - 19782466
Alignment:
Q  91 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  19782379 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 19782466  T

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Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 17152315 - 17152226
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| ||| |||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  17152315 gcactcagttctggaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 17152226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 23139548 - 23139637
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  23139548 gcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 23139637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 26243493 - 26243404
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26243493 gcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26243404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 28569271 - 28569183
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||  || || |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  28569271 cactcaattctggaagtgctcacgaagcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 28569183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 33742657 - 33742745
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  33742657 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 33742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 27534303 - 27534362
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||||||    
T  27534303 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 27534362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 4561160 - 4561102
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  4561160 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 4561102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 5756764 - 5756706
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  5756764 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 5756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 11250389 - 11250300
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  11250389 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 11250300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 18237170 - 18237259
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  18237170 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 18237259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 43255990 - 43255930
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||  ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  43255990 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 43255930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 3413082 - 3413159
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 174  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  |||||||||    
T  3413082 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttcta 3413159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 23838711 - 23838800
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  23838711 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 23838800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 25555802 - 25555883
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| ||  |||||| |||||    
T  25555802 ttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatgattgttccaggtt 25555883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 42997275 - 42997222
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    |||||||||||||||| ||| ||||| |||||||||| ||| ||||||||||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtac 42997222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 14708459 - 14708403
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||| |||| || ||| ||||| |||||||||||||| |||||||||||||||    
T  14708459 ctcaattcaggaaatgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 14708403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 16351668 - 16351620
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  16351668 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 16351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 41385574 - 41385484
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| |||||||||||||||  |  |||||||| |  |||||||||||||    
T  41385574 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcgaacttcccaactaatgttgttctaggtt 41385484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 9530711 - 9530800
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  9530711 gcactcagttctggaagtgctcgcgaggtgagagcatcatctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 9530800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 14679240 - 14679329
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  ||||| || |  |||||||||||||    
T  14679240 gcactctaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttccctactaatgttgttctaggtt 14679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 14685458 - 14685538
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||  |  |||||||||||||    
T  14685458 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaaataatgttgttctaggtt 14685538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 18602562 - 18602514
Alignment:
Q  100 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||| ||| ||||| |||||||| ||||| |||||||||||||||    
T  18602562 tggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaag 18602514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 6325 - 6533
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||| || ||||||||||||| ||||||||||||||||  |||||| |||||||||   |  ||||||||||| || ||||||||||| ||| ||||      
T  6325 taggtttctttactacccagggatccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggag 6424  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  6425 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 6524  T
Q  219 tattaaaca 227  Q
    || ||||||    
T  6525 taataaaca 6533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 15643 - 15824
Alignment:
Q  39 gggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 138  Q
    |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||    
T  15643 gggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15742  T
Q  139 cgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    |||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||||    
T  15743 cgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcttta 15824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 14894 - 15103
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||| ||||||||||||||| |||||||||||||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  14894 taggtttcattactacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 14993  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||| | | |||||||||| | ||| ||| | ||||||||  ||||||||||||||| |||||    
T  14994 agagcatctgctcgccatggcgagtacaagccagattcccatctaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatcttatctt 15092  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  15093 taataaacatc 15103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 23909 - 24118
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||| ||||||||||||||| |||||||||| ||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  23909 taggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 24008  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||  |||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||  |||||||||||||||||||||    
T  24009 agagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatctaatctt 24107  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  24108 taataaacatc 24118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 39333 - 39542
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||| ||||||||||||||| |||||||||| ||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  39333 taggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 39432  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||  |||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||  |||||||||||||||||||||    
T  39433 agagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatctaatctt 39531  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  39532 taataaacatc 39542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 18462 - 18672
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| ||| |||||  ||  |||||||||||||| ||||||||| | ||| |||||     
T  18462 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacatatcgcaatatcctcacttgcactcagttctggaagcgctcgtgaggcg 18561  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    ||||||| |||||| ||||||||||||||| |||||||| ||| |  | ||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  18562 agagcatttgctcgccatggcgagtacaagccagattccaaactaatgatgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 18661  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  18662 taataaacatc 18672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 76998 - 76910
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||| | ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  76998 cactcaattctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagccagcttcccaacgaaggttgttccaggtt 76910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 220
Target Start/End: Original strand, 32665 - 32857
Alignment:
Q  28 ttactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatct 127  Q
    |||||||||||||||||| |||||| ||||  |||||| |||||||||| ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  32665 ttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatct 32764  T
Q  128 gctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    ||||  |||| |||||||||| |||||||||||| |  ||||||||| | ||| ||| | |||||||| |||||||||||||| |||||||||    
T  32765 gctcaacatgtcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcgttctaagttatcatttaatcttta 32857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 8778 - 8836
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  8778 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 8836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 6975 - 6772
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||| ||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||| ||||||||||| ||| |||||     
T  6975 taggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaattgcactcagttctggaagtgctcgcgaggcg 6876  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  6875 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 6776  T
Q  219 tatt 222  Q
    ||||    
T  6775 tatt 6772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 18350 - 18159
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| ||| |||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  18350 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 18251  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcat 210  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||| ||||| | ||| ||| | ||||| |||||||||||||||||    
T  18250 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttattctaagctaaaccaggttcaatttcattctaagttatcat 18159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 3964 - 4173
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  3964 taggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 4062  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    ||||||| | |||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||| |||||| ||||| |    
T  4063 agagcatttactcgccatggcgagtacaagctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcat 4162  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  4163 taataaacatc 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 8395 - 8604
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  8395 taggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 8493  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    ||||||| | |||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||| |||||| ||||| |    
T  8494 agagcatttactcgccatggcgagtacaagctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcat 8593  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  8594 taataaacatc 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 27 - 229
Target Start/End: Complemental strand, 16238 - 16036
Alignment:
Q  27 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 126  Q
    ||||||||||| ||||||| |||||||||||  |||||| |||||||||   || |||||||||||||||||||||||||| ||| ||||| || |||||    
T  16238 attactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcgagggcatc 16139  T
Q  127 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 226  Q
    |||||| ||||||||||||||| ||||||||| || |  ||||||||| | ||| ||  | |||||||||||||||  |||||| ||||||||| |||||    
T  16138 tgctcgccatggcgagtacaagccagattccctaccaatgttgttctaagctaaacctggttcaatctcattctaaactatcatttaatctttaataaac 16039  T
Q  227 atc 229  Q
    |||    
T  16038 atc 16036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 18490 - 18343
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | |||     
T  18490 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 18391  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | ||||||||||||||||||||||| ||||||||| ||||||||    
T  18390 ccaggttcaatctcattctaagttatcatttaatctttaataaacatc 18343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 82; Significance: 7e-39; HSPs: 4)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 34807 - 34606
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| |||||||||||||| |||   ||| || | || ||||  |   |||||||||||||| ||||||||||| ||| |||||     
T  34807 taggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcacttgcactcagttctggaagtgctcgcgaggcg 34708  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  34707 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 34608  T
Q  219 ta 220  Q
    ||    
T  34607 ta 34606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 225
Target Start/End: Complemental strand, 41387 - 41244
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||| ||||  ||||| ||  ||||  | |||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||     
T  41387 ctcacttgcactcagttctaaaagtgctcacgaggtgaaagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 41288  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaa 225  Q
    | | | ||||||||| ||||||| ||||||||||||||| ||||    
T  41287 ctaggttcaatctcactctaagtcatcatctaatctttaataaa 41244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 64131 - 64203
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  64131 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 64203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 76015 - 76074
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  76015 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 76074  T

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Target: scaffold0297 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 15566 - 15407
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||||| |||||||||||||||||||  | |||| ||||||| |  ||  |||||||||||| | |||| |||||| ||| |||||     
T  15566 taggtctcattactacccaagggtccatctctaatcaaattaagcgacacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcg 15467  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||    
T  15466 agagcatctgcttgccatggcgagtacaagccagattcccaacaaaagttgttctaggtt 15407  T

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Target: scaffold0198 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 26706 - 26833
Alignment:
Q  102 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta 201  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||    
T  26706 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattcta 26805  T
Q  202 agttatcatctaatctttattaaacatc 229  Q
    ||||||||| ||||||||| ||| ||||    
T  26806 agttatcatttaatctttaataagcatc 26833  T

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Target: scaffold0215 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 27048 - 27246
Alignment:
Q  22 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 121  Q
    |||||||||||||||| |||||||||||||| ||||| || ||| |||||||||  ||  |||||||||||||| |||||||| || | | |||||||||    
T  27048 gtctcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaaga 27147  T
Q  122 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    ||||||||||| |||||||| |||||| |||| | ||||| | |||||||||| | ||  ||| | | |||||| |||||||||||||| |||||||||    
T  27148 gcatctgctcgccatggcgaatacaagccagaattccaactaaagttgttctaagctataccaggttaaatctcgttctaagttatcatttaatcttta 27246  T

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Target: scaffold0023 (Bit Score: 79; Significance: 4e-37; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 23564 - 23354
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||||| ||||||| |  ||||||||  |||||| | |||||||      |||||||||||||| |||| |||||| ||| |||||     
T  23564 taggtcacattactacccaagggtccaacattaatcaaattatgcgacaaagatcgcaaagttctcacttgcactcagttctagaagtgctcgcgaggcg 23465  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  23464 agagcatctgctcgccatggcgagaacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 23365  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  23364 taataaacatc 23354  T

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Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 38289 - 38187
Alignment:
Q  127 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 226  Q
    |||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| | | | ||||||||| ||||||| ||||| ||||||||| |||||    
T  38289 tgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaactatgttcaatctcactctaagtcatcatgtaatctttaataaac 38190  T
Q  227 atc 229  Q
    |||    
T  38189 atc 38187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 38376 - 38320
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgc 75  Q
    |||||| |||||||||||| ||||||| |||||||||||  |||||| |||||||||    
T  38376 taggtcacattactacccaagggtccaactctaatcaaattatgcgacacagatcgc 38320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 21703 - 21502
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||| |||| |||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  21703 taggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 21604  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| |||   |||||||| |||||||||||||| |||||||    
T  21603 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctt 21504  T
Q  219 ta 220  Q
    ||    
T  21503 ta 21502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 29595 - 29394
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||| |||| |||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  29595 taggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 29496  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| |||   |||||||| |||||||||||||| |||||||    
T  29495 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctt 29396  T
Q  219 ta 220  Q
    ||    
T  29395 ta 29394  T

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Target: scaffold0017 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 191100 - 190968
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 196  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||||| ||| | |||||||||    
T  191100 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaattttgttctaggttaaaccaggttcaatctca 191001  T
Q  197 ttctaagttatcatctaatctttattaaacatc 229  Q
    |||||||||||||| ||||| ||  ||||||||    
T  191000 ttctaagttatcatttaatcatttctaaacatc 190968  T

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Target: scaffold0017; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 192802 - 192671
Alignment:
Q  98 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcat 197  Q
    |||||||||  ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||||| ||| | |||||||||     
T  192802 tctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaagtttgttctaggttaaaccaggttcaatctcaa 192703  T
Q  198 tctaagttatcatctaatctttattaaacatc 229  Q
    ||||||||||||| ||||| ||  ||||||||    
T  192702 tctaagttatcatttaatcatttctaaacatc 192671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 56376 - 56464
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  56376 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 56464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 225
Target Start/End: Complemental strand, 13911 - 13768
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | ||||| |||| | |||     
T  13911 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttggtctaagctaaa 13812  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaa 225  Q
    ||| | ||||||||| | ||||| ||||||||||||||| ||||    
T  13811 ccaggttcaatctcactataagtcatcatctaatctttaataaa 13768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 6199 - 6005
Alignment:
Q  26 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 125  Q
    |||||||||  ||||||||||||||||||||   |||||| |||  ||||   |  |||||||||| ||||||||||||||| ||| ||||| |||||||    
T  6199 cattactacttaggggtccatctctaatcaagttatgcgacacaagtcgcaacatcctcacttgcattcaattctggaagtgctcgcgaggcgagagcat 6100  T
Q  126 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    ||||||| ||||||||||||||| |||||||||||| |  ||||||||| | | | ||| | ||||||||| |||||||  ||||||||||||||    
T  6099 ctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaagcttaaccaggttcaatctcaatctaagtcttcatctaatcttta 6005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 6313 - 6103
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| ||| |||||  ||  || ||||||| ||| ||||||||||| ||| |||||     
T  6313 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaacttgcattcagttctggaagtgctcgcgaggcg 6214  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||||| ||||||||||||||| | |||||||||||||    
T  6213 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaagttcaatctcattctaaatcatcatctaatctt 6114  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  6113 taataaacatc 6103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 46624 - 46414
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | | ||||||| ||||||||   |||||| |||||||||   |  || ||||||||||| ||||||||||| ||| ||||      
T  46624 taggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggag 46525  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    ||||||| || ||  ||||||||||||||| |||||||| ||| | |||||||||| | ||| ||||| ||||||||| ||||||| |||||||||||||    
T  46524 agagcatttggtcaccatggcgagtacaagccagattcctaactaaagttgttctaagctaaaccaagttcaatctcactctaagtcatcatctaatctt 46425  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  46424 taataaacatc 46414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 1712 - 1922
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||| | |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  1712 taggtcacattactacctaagggtccaaccctaatcaatttatgcaaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 1811  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  1812 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 1911  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  1912 taataaacatc 1922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 4712 - 4859
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||| ||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||  | |||||||||| | |||     
T  4712 ctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaaataaagttgttctaagctaaa 4811  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | |||||||  |||||||| ||||||||||||||| ||||||||    
T  4812 ccaggttcaatcttgttctaagtcatcatctaatctttaataaacatc 4859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 13043 - 13190
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||| || || | ||||||| | |||| ||||| | |||     
T  13043 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccataatcccaactaaagttattctaagctaaa 13142  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||| | |||||||||||||| |||||||| ||||||||| ||||||||    
T  13143 ccaggttcaatctcattctatgttatcatttaatctttaataaacatc 13190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 61439 - 61381
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  61439 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 61381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 65352 - 65267
Alignment:
Q  93 tcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||| ||| ||||| |||||||||||||| | |||||| |||||| ||  || ||||| |  |||||||||||||    
T  65352 tcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgaatacaagccaactttccaactaaggttgttctaggtt 65267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 612 - 822
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||||| | ||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  612 taggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 711  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||  ||||||||||||||| |||||| |||||   ||||||||||   ||| ||| | |||||||| |||||| | |||||||||||||    
T  712 agagcatctgctcaccatggcgagtacaagccagatttccaactcaagttgttctaaactaaaccaggttcaatctcgttctaaatcatcatctaatctt 811  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  812 taataaacatc 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 2098 - 2308
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | |||||||     |  |||||||||||||| |||| |||||| ||| |||||     
T  2098 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactcagttctcgaagtgctcgcgaggcg 2197  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||||| |||| ||| |||| |||||||    
T  2198 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatctcagtctaggttctcatttaatctt 2297  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  2298 taataaacatc 2308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 1981 - 1771
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||| | |||||| |  ||||||| ||||||| |   |  |||| ||||||||| ||||||||||| ||| |||||     
T  1981 taggtcacattactacctaagggtccaaccctaatcgattcatgcgacacagatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcg 1882  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| |||||||||||||||  ||| | ||||| | |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  1881 agagcatctgctcgccatggcgagtacaagctagaattccaactaaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 1782  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  1781 taatacacatc 1771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 7512 - 7722
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || ||||| ||| |   |  |||||||||||||| || |||||||| ||| |||||     
T  7512 taggtctcattactacctaagggtccatccctaatcaattcaagcaatacaaatcactacattctcacttgcactcagttttggaagtgctcgcgaggcg 7611  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    ||||||| |||||| || ||||||| |||| |||| ||||||| | | |||||| | | ||| ||| | ||||||||| ||||||||||||| |||||||    
T  7612 agagcatttgctcgccacggcgagtccaagccagaatcccaactaaaattgttccaagctaaaccaggttcaatctcagtctaagttatcatttaatctt 7711  T
Q  219 tattaaacatc 229  Q
    || ||||||||    
T  7712 taataaacatc 7722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 178974 - 179084
Alignment:
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||| ||||||||||||||| |||||||    
T  178974 agagcatctgctagccatggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatcttattctaagttatcatttaatctt 179073  T
Q  219 tattaaacatc 229  Q
    || ||| ||||    
T  179074 taataagcatc 179084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 2502 - 2412
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  2502 tgcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 229
Target Start/End: Complemental strand, 16949 - 16808
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 187  Q
    |||||||  |||| |||||| ||| ||||| |||||||||||||| ||||||||||||| | |||||||||||| |  ||||||||| | ||| |||||     
T  16949 tgcactcggttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacatgccagattcccaactaaggttgttctaagctaaaccaagt 16850  T
Q  188 tcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    |||||||  |||||||| |||||||||| |||| ||||||||    
T  16849 tcaatcttgttctaagtcatcatctaatatttaataaacatc 16808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 2129 - 2258
Alignment:
Q  100 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattc 199  Q
    |||||||| ||| ||||| ||||||||| |||| |||||||||||||||||||||| |||||   |||||||||| | ||| ||| | |||||||| ||     
T  2129 tggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaatctcgttt 2228  T
Q  200 taagttatcatctaatctttattaaacatc 229  Q
    ||| | ||||||||||||||||||||||||    
T  2229 taaatcatcatctaatctttattaaacatc 2258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 9811 - 9940
Alignment:
Q  100 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattc 199  Q
    |||||||| ||| ||||| ||||||||| |||| |||||||||||||||||||||| |||||   |||||||||| | ||| ||| | |||||||| ||     
T  9811 tggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaatctcgttt 9910  T
Q  200 taagttatcatctaatctttattaaacatc 229  Q
    ||| | ||||||||||||||||||||||||    
T  9911 taaatcatcatctaatctttattaaacatc 9940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 30573 - 30436
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 187  Q
    |||||||| ||||| ||||| ||| ||||| |||||||||||||| ||||||||||| ||| |||||| |||||   |||||||||| | ||| ||| |     
T  30573 tgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtataagccagatttccaactccagttgttctaagctaaaccaggt 30474  T
Q  188 tcaatctcattctaagttatcatctaatctttattaaa 225  Q
    |||||||| |||||| | ||||||||||||||||||||    
T  30473 tcaatctcgttctaaatcatcatctaatctttattaaa 30436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 2157 - 2213
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 3128 - 3271
Alignment:
Q  86 cttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaa 185  Q
    |||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||| | |||||   |||||||||| | ||| |||     
T  3128 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattccaacttaagttgttctaagctaaaccag 3227  T
Q  186 gctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    |  ||||||||||||| |||||||| ||||||||| ||||||||    
T  3228 gtgcaatctcattctaggttatcatttaatctttaataaacatc 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 6794 - 6937
Alignment:
Q  86 cttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaa 185  Q
    |||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||  |||||||| |||| | |||||   |||||||||| | ||| |||     
T  6794 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagaattccaacttaagttgttctaagctaaaccag 6893  T
Q  186 gctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    |  ||||||||||||| |||||||| ||||||||| ||||||||    
T  6894 gtgcaatctcattctaggttatcatttaatctttaataaacatc 6937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 804 - 945
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||| |||||||||  ||  |||| || |||||| ||||||||||| ||  |||||     
T  804 taggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatttacactcagttctggaagtgctcacgaggcg 903  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 160  Q
    ||| |||||||||| |||||||||| || | |||| ||||||    
T  904 agaacatctgctcgccatggcgagttcagggcagaatcccaa 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 377 - 589
Alignment:
Q  17 attaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagagg 116  Q
    |||||||| |||||||||| | ||||||||| ||||||||   |||||| |||||||    ||  || ||||||||||| |||| |||||| | | ||||    
T  377 attaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaacttgcactcagttctagaagtgcttgcgagg 476  T
Q  117 caagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatc 216  Q
      ||||||||| |||| ||||||||||||||| |||| | ||||| | |||||||||| | ||| ||| | |||||||| |||||||| ||| ||||| |    
T  477 agagagcatctactcgccatggcgagtacaagccagaattccaactaaagttgttctaagctaaaccaggttcaatctcgttctaagtcatcgtctaacc 576  T
Q  217 tttattaaacatc 229  Q
     ||| ||||||||    
T  577 attaataaacatc 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 5872 - 6014
Alignment:
Q  87 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 186  Q
    ||||| ||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||| | | ||| ||| |    
T  5872 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcgaagctaaaccagg 5971  T
Q  187 ctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     |||||||  |||||||| ||||||||||||||| ||||||||    
T  5972 ttcaatcttgttctaagtcatcatctaatctttaataaacatc 6014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 7067 - 7209
Alignment:
Q  87 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 186  Q
    ||||| ||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| | |||||||| | | ||| ||| |    
T  7067 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattacaactaaagttgttcaaagctaaaccagg 7166  T
Q  187 ctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     |||||||  |||||||| ||||||||||||||| ||||||||    
T  7167 ttcaatcttgttctaagtcatcatctaatctttaataaacatc 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 1183 - 1325
Alignment:
Q  87 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 186  Q
    ||||| ||| |||| |||||| ||| ||||| ||| |||||||||| ||||||||||||||| |||||| |||||   |||||||||| | |||  || |    
T  1183 ttgcattcagttctagaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaatcagg 1282  T
Q  187 ctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     ||||||||||||||| | ||||||||||||||| || |||||    
T  1283 ttcaatctcattctaaatcatcatctaatctttaatagacatc 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 18461 - 18371
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||  |  |||||||||||||    
T  18461 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaataaggttgttctaggtt 18371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 19465 - 19555
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  19465 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 19555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 13181 - 13271
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||  ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13181 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 62541 - 62597
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||  ||| ||||| |||||||||||||| |||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaag 62597  T

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Target: scaffold0037 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 21466 - 21256
Alignment:
Q  19 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 118  Q
    |||||| |||||||||| | ||||||||| ||||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  21466 taggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 21367  T
Q  119 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 218  Q
    |||||||||||||| || |||||||||||| |||| | ||||| |  |||| |||| | ||| ||| | |||||||||| |||  ||||||| ||||| |    
T  21366 agagcatctgctcgccacggcgagtacaagccagaattccaactaaggttgctctaagctaaaccaggttcaatctcatcctacattatcatttaatcct 21267  T
Q  219 tattaaacatc 229  Q
    || || |||||    
T  21266 taatacacatc 21256  T

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Target: scaffold0036 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 66244 - 66154
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  66244 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 66154  T

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Target: scaffold0009 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 228202 - 228112
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  228202 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 228112  T

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Target: scaffold0003 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 71590 - 71680
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  71590 tgcactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 71680  T

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Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 96883 - 96973
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  96883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 96973  T

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Target: scaffold0003; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 139988 - 140077
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  139988 gcactcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttctaggtt 140077  T

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Target: scaffold0003; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 413870 - 413822
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  413870 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 413822  T

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Target: scaffold1461 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 207 - 296
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  207 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 296  T

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Target: scaffold0585 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 9613 - 9701
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||| |  ||||||| |||||    
T  9613 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgttccaggtt 9701  T

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Target: scaffold0193 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 9701 - 9787
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 9787  T

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Target: scaffold0107 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 15247 - 15157
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||| |  ||||||| |||||    
T  15247 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgttccaggtt 15157  T

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Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 173567 - 173657
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  173567 tgcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 173657  T

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Target: scaffold1220 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 2079 - 2148
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcc 157  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||    
T  2079 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcc 2148  T

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Target: scaffold0410 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 11658 - 11747
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||| |||||| |  |||||||||||||    
T  11658 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatccccaactaaggttgttctaggtt 11747  T

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Target: scaffold0177 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 13316 - 13243
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| ||||  |||||||||||||| ||||||||||||||| ||||||||||||    
T  13316 tgcactcagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagccagattcccaac 13243  T

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Target: scaffold0168 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 3359 - 3286
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 161  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  3359 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaac 3286  T

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Target: scaffold0120 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 19845 - 19756
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  19845 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 19756  T

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Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 10181 - 10270
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  10181 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 10270  T

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Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 24796 - 24707
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  24796 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 24707  T

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Target: scaffold1326 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 1324 - 1187
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||||||||||| | ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||| | ||||||||          ||||| |    
T  1324 ctcacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagaattccaacaat----------ggttatt 1235  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||||| |||||||  |||||||| | ||||||||||||| ||||||||    
T  1234 ccaagttcaatcttgttctaagtcaacatctaatctttaataaacatc 1187  T

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Target: scaffold0483 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 608 - 684
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaat 164  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||||    
T  608 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaat 684  T

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Target: scaffold0109 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 45395 - 45471
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaat 164  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||||    
T  45395 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaat 45471  T

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Target: scaffold0109; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 11129 - 11071
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| ||||| |||||||||    
T  11129 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaag 11071  T

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Target: scaffold0109; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 38646 - 38588
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||||||||| |||||| ||  ||||| |||| ||||||||| |||||||||||||||    
T  38646 cactcaattcttgaagtgctcacgaggcgagaggatctgctcgccatggcgagtacaag 38588  T

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Target: scaffold0327 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 566 - 698
Alignment:
Q  87 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 186  Q
    ||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| | ||||||||          ||||| |||| |    
T  566 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacaat----------ggttattccagg 655  T
Q  187 ctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
     |||||||  |||||||| ||||||||||||||||||||||||    
T  656 ttcaatcttgttctaagtcatcatctaatctttattaaacatc 698  T

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Target: scaffold0220 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 4767 - 4620
Alignment:
Q  82 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 181  Q
    |||| ||||||||  || ||||| || ||| ||||| ||||||||| |||  |||| |||||||||| |||| | ||||| | |||||||||| | |||     
T  4767 ctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatgacgagtacaagccagaattccaactaaagttgttctaagctaaa 4668  T
Q  182 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    ||  | ||||||||| ||||||| ||||||||||||||| ||||||||    
T  4667 cccggttcaatctcactctaagtcatcatctaatctttaataaacatc 4620  T

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Target: scaffold0280 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 19120 - 19030
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  19120 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 19030  T

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Target: scaffold1895 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 1037 - 944
Alignment:
Q  127 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 220  Q
    |||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| | | | ||||||||||||||||||||||| |||||||||    
T  1037 tgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaactaggttcaatctcattctaagttatcatttaatcttta 944  T

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Target: scaffold1895; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 1116 - 1036
Alignment:
Q  27 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtg 107  Q
    ||||||||||| || ||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| |||||||||||    
T  1116 attactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtg 1036  T

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Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 23494 - 23583
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  23494 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 23583  T

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Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 242335 - 242424
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  242335 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 242424  T

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Target: scaffold0372 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 4928 - 4840
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  4928 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 4840  T

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Target: scaffold0346 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 15374 - 15490
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 187  Q
    |||||||| ||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| | |||||||||| | ||| ||| |     
T  15374 tgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatttcaactaaagttgttctaagctaaaccaggt 15473  T
Q  188 tcaatctcattctaagt 204  Q
    |||||||  ||||||||    
T  15474 tcaatcttgttctaagt 15490  T

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Target: scaffold0342 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 7098 - 7042
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 145  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  7098 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtac 7042  T

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Target: scaffold0284 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 18633 - 18721
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | | |||||| |||| |||||||||||| |  ||||||| |||||    
T  18633 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccttagcgagttcaagccagattcccaactaaggttgttccaggtt 18721  T

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Target: scaffold1552 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 639 - 716
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 174  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | |||||||  |||||||||    
T  639 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaacaaaggttgttcta 716  T

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Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 2255 - 2174
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  2255 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactacggttgttccaggtt 2174  T

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Target: scaffold0439; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 10115 - 10064
Alignment:
Q  97 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  10115 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 10064  T

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Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 4052 - 3995
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 146  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  4052 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 3995  T

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Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 35338 - 35249
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  35338 gcactcagttctggaagtgctcgcgaggcgagagcatctcctcgccatggcgagtacaagccaggtttccaactaaggttgttccaggtt 35249  T

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Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 36583 - 36672
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||    |||||||||||||    
T  36583 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaggttgttctaggtt 36672  T

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Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 15618 - 15674
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||| |||||||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtacaag 15674  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 58545 - 58457
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||| |||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  58545 cactcaattctagaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 58457  T

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Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 5828 - 5769
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| |||||||||||||||    
T  5828 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaag 5769  T

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Target: scaffold0546 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 2178 - 2236
Alignment:
Q  90 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| ||||| |||||||||    
T  2178 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaag 2236  T

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Target: scaffold0334 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 18184 - 18099
Alignment:
Q  93 tcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||| ||| ||||  |||||||| ||||| ||| ||||||||||| |||||||| ||| |  ||||||| |||||    
T  18184 tcaattctggaagtgctcgcgaggtgagagcatcagctcgccatagcgagtacaagccagattcctaactaaggttgttccaggtt 18099  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 192144 - 192055
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||||||||||||||| ||  ||||| |||||||| ||||| || |||||||||||| |||| | |||| | | ||||||| |||||    
T  192144 gcactcaattctggaagtgctcacgaggcgagagcatcagctcgccacggcgagtacaagccagaattccaatactggttgttccaggtt 192055  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 16488 - 16432
Alignment:
Q  92 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 148  Q
    |||||||||||||||| | | ||||| || ||||||||||| |||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatggcgagtacaag 16432  T

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Target: scaffold0138 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 30036 - 29946
Alignment:
Q  88 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||  |  |||||||||||||    
T  30036 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaaataatgttgttctaggtt 29946  T

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Target: scaffold0637 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 8849 - 8938
Alignment:
Q  89 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 178  Q
    ||||||| |||||||| || ||| ||||| ||||||||| |||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  8849 gcactcagttctggaaatgctcgcgaggcgagagcatctcctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 8938  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 64391 - 64350
Alignment:
Q  188 tcaatctcattctaagttatcatctaatctttattaaacatc 229  Q
    |||||||||||||| |||||||| ||||||||| ||||||||    
T  64391 tcaatctcattctatgttatcatttaatctttaataaacatc 64350  T

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