View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18017_low_15 (Length: 272)
Name: NF18017_low_15
Description: NF18017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18017_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 39089850 - 39090105
Alignment:
| Q |
1 |
ttctagatgctaaatgataaaaagtatgcttttgggattctataatgtctaagctgatagacataccgagaaagatcttttctagaaaatatgtaagctg |
100 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39089850 |
ttctagatactaaatgataaaaagtatgcttttgggattctataatgtctaagctgatagacataccgagaaagatcttttctagaaaatatgtaagctg |
39089949 |
T |
|
| Q |
101 |
catttacagattcagacgctgtaccgattttgtaagaacctgaaatgggtaaagatatgaacttttcaattagaagcagaccatgtagcaaaagctaagc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39089950 |
catttacagattcagacgctgtaccgattttgtaagaacctgaaatgggtaaagatatgaacttttcaattagaagcagaccatgtagcaaaagctaagc |
39090049 |
T |
|
| Q |
201 |
aggaatccatagaggaagaaaatagtatatatcattcagtggttcagcctataagt |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39090050 |
aggaatccatagaggaagaaaatagtatatatcattcagtggttcagcctataagt |
39090105 |
T |
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