View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18017_low_17 (Length: 255)
Name: NF18017_low_17
Description: NF18017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18017_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 43279899 - 43279663
Alignment:
| Q |
3 |
cacagataggttccaagattgaatacaattataggaaatggaaataagatatttgcacgtgaaattgtttgtggcaataattcatacaaatatgatgcat |
102 |
Q |
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| T |
43279899 |
cacagataggttccaagattgaatacaattataggagatggaaataagatatttgcacgtgaaattgtttgtggcaataattcatacaaatatgatgcat |
43279800 |
T |
|
| Q |
103 |
agctaaccagtgcagtgcctttcaggtagtagttaggtgatttgatggcaataagtgccacaaaagtttttgtctcttaagaaggcctatacagtctcat |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43279799 |
agctaaccagtgcagtgcctttcaggtagtagttaggtgatttgatggcaataagtgccacaaaagtttttgtctcttaagaaggcctatacagtctcat |
43279700 |
T |
|
| Q |
203 |
tccctaaggacaagttttgtactgtaatgggtgaatc |
239 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
43279699 |
tccctaaggacaagttttgtactgtaatgggtgaatc |
43279663 |
T |
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