View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18017_low_9 (Length: 393)
Name: NF18017_low_9
Description: NF18017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18017_low_9 |
 | |
|
| [»] scaffold0021 (1 HSPs) |
| | |
|
| [»] scaffold0206 (1 HSPs) |
| | |
|
| [»] scaffold0771 (1 HSPs) |
| | |
|
| [»] scaffold0334 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0053 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 336; Significance: 0; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 23884310 - 23883948
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattgaagagattgatagcttttgctttgagagagataaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23884310 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaaagatgattgaagagattgatagcttttgctttgagagagataaa |
23884211 |
T |
|
| Q |
118 |
tgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23884210 |
tgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
23884111 |
T |
|
| Q |
218 |
ccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
317 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23884110 |
ccattttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagttttgcccagatcattctctcagttccaacca |
23884011 |
T |
|
| Q |
318 |
aaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctt |
381 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23884010 |
aaacttgaacg-aaattgtagagcacatgcttgcttagttggtgatgagctgtgatcaagcctt |
23883948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 22066111 - 22065747
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattgaagagattgatagcttttgctttgagagagataaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22066111 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaaagatgattgaagagattgatagcttttgctttgagagaaataaa |
22066012 |
T |
|
| Q |
118 |
tgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22066011 |
tgctttgtatttcaaactcttgcttttctccttcaatgtcctcttctatttatagagttgaattccttggagagcaagctaataaagagctgttgtgctt |
22065912 |
T |
|
| Q |
218 |
ccaatttgaatttgaattatggctcc-aaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacc |
316 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22065911 |
ccaatttgaatttgaattttggctcctaaagagacttggggagaaagcatgtagagaatgttccttcagtttcgcccagatcattctctcagttccaacc |
22065812 |
T |
|
| Q |
317 |
aaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctt |
381 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22065811 |
aaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctt |
22065747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 13218116 - 13218051
Alignment:
| Q |
108 |
gagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||| ||| ||||| |||||||||| || ||||||||| |||| |||||||||||| |
|
|
| T |
13218116 |
gagagataaatgttttgtatttgaaactcttgctcttaaccttcaatgacctcctctatttataga |
13218051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 18 - 383
Target Start/End: Original strand, 33292546 - 33292909
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattgaagagattgatagcttttgctttgagagagataaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33292546 |
tatatgtcaaacaaactatccttgtacaa-cttagaaatatgttctcaatgagaaaagatgattgaagagattgatagcttttgctttgagagagataaa |
33292644 |
T |
|
| Q |
118 |
tgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33292645 |
tgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaaccccttggagagcaagccaataaagagctgttgtgctt |
33292744 |
T |
|
| Q |
218 |
ccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
317 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
33292745 |
tcaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcacccagatcattctctcagttccaacca |
33292844 |
T |
|
| Q |
318 |
aaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
383 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33292845 |
aaacttgaacg-aaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
33292909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 18 - 383
Target Start/End: Original strand, 15947742 - 15948119
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagattgatagcttttgctt |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| ||| |
|
|
| T |
15947742 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcagtgagaaaagatgattgtcgagagatgttgaagagattgatagctttttctt |
15947841 |
T |
|
| Q |
105 |
t-gagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaa |
203 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
15947842 |
ttgagagagataaatgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcc-ttggagagcaagctaataaa |
15947940 |
T |
|
| Q |
204 |
gagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattct |
303 |
Q |
| |
|
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15947941 |
gagttgttgtgcttccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattct |
15948040 |
T |
|
| Q |
304 |
ctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
383 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15948041 |
ctcagttccaaccaaaacttgaacg-aaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
15948119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 377
Target Start/End: Original strand, 14635107 - 14635481
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagatt-gatagcttttgct |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
14635107 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaagagatgattgtcgagagatgttgaagagatttgatagcttttgct |
14635206 |
T |
|
| Q |
104 |
ttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaa |
203 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |
|
|
| T |
14635207 |
ttgagagagataaatgctttgtatttcaaactcttgcttttctccttcaatgtcctcttctatttatagagttgaattccttggagagcaagctaataaa |
14635306 |
T |
|
| Q |
204 |
gagctgttgtgcttccaatttgaatttgaattatggctcc-aaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14635307 |
gagctgttgtgcttccaatttgaatttgaattttggctcctaaagagacttggggagaaagcatgtagagaatgttccttcagtttcgcccagatcattc |
14635406 |
T |
|
| Q |
303 |
tctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaag |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14635407 |
tctcagttccaaccaaaacttgaacgaaaattatagagcacgtgcttgcttagttggtgatgagctgtgaccaag |
14635481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 377
Target Start/End: Original strand, 14644807 - 14645181
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagatt-gatagcttttgct |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
14644807 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaagagatgattgtcgagagatgttgaagagatttgatagcttttgct |
14644906 |
T |
|
| Q |
104 |
ttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaa |
203 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |
|
|
| T |
14644907 |
ttgagagagataaatgctttgtatttcaaactcttgcttttctccttcaatgtcctcttctatttatagagttgaattccttggagagcaagctaataaa |
14645006 |
T |
|
| Q |
204 |
gagctgttgtgcttccaatttgaatttgaattatggctcc-aaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14645007 |
gagctgttgtgcttccaatttgaatttgaattttggctcctaaagagacttggggagaaagcatgtagagaatgttccttcagtttcgcccagatcattc |
14645106 |
T |
|
| Q |
303 |
tctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaag |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14645107 |
tctcagttccaaccaaaacttgaacgaaaattatagagcacgtgcttgcttagttggtgatgagctgtgaccaag |
14645181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 296; Significance: 1e-166; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 18 - 383
Target Start/End: Original strand, 14272384 - 14272762
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagattgatagcttttgctt |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
14272384 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaaagatgattgtcgagagatgttgaagagattgatagcttttgctt |
14272483 |
T |
|
| Q |
105 |
t-gagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaa |
203 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14272484 |
ttgagagagataaatgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagctaataaa |
14272583 |
T |
|
| Q |
204 |
gagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattct |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14272584 |
gagctgttgtgcttccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagaacattct |
14272683 |
T |
|
| Q |
304 |
ctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
383 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14272684 |
ctcagtcccaaccaaaacttgaacg-aaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
14272762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 18 - 383
Target Start/End: Original strand, 14282250 - 14282629
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagattgatagcttttgctt |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
14282250 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaaagatgattgtcgagagatgttgaagagattgatagcttttgctt |
14282349 |
T |
|
| Q |
105 |
t-gagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaa |
203 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14282350 |
ttgagagagataaatgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagctaataaa |
14282449 |
T |
|
| Q |
204 |
gagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcg-cccagatcattc |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
14282450 |
gagctgttgtgcttccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgccccagaacattc |
14282549 |
T |
|
| Q |
303 |
tctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
383 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282550 |
tctcagtcccaaccaaaacttgaacg-aaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
14282629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 80 - 382
Target Start/End: Original strand, 3471391 - 3471690
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaa |
179 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
3471391 |
ttgaagagattgatagtttttgctttgagagagataaatgctttgtatttcaaactcttgcatttctccttcaatatcctcttctatttatagagttgaa |
3471490 |
T |
|
| Q |
180 |
tcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgttt |
279 |
Q |
| |
|
||||||||| ||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3471491 |
tcccttggaaagcaagctaaaaaagagctgttgtgcttccaatttgaattcgaattttggctccaaagagacttgggaagaaagcatgtagagaatgttt |
3471590 |
T |
|
| Q |
280 |
cttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcc |
379 |
Q |
| |
|
||||||||| |||||| ||||||||||| |||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3471591 |
cttcagtttttcccagaatattctctcagtcccaacc-aaacttgaacg-aaattgtagagtacgtgcttgc-tagttggtgatgagctgtgatcaagcc |
3471687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 21633367 - 21633232
Alignment:
| Q |
84 |
agagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatag-agctgaa-tc |
181 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||| | || ||||||||| ||| ||||||||||| ||||||| | |
|
|
| T |
21633367 |
agagaatgattgcttttgctttgagagagataaatgctttgtatttcaaattcttactcttaaccttcaatgaccttctctatttatagaagctgaagac |
21633268 |
T |
|
| Q |
182 |
ccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
||||||| |||||||| | |||||||||| |||| |
|
|
| T |
21633267 |
ccttggaatgcaagccacaacagagctgttgagctt |
21633232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 21919779 - 21919875
Alignment:
| Q |
80 |
ttgaagagattgatagctt--ttgctttgagagagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
21919779 |
ttgaagagattgatagtttgtttgctttgagagagataaatgcttttgtatttcaaactcttggtttttgccttggatgtcttcctctatttataga |
21919875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 18 - 383
Target Start/End: Complemental strand, 12925172 - 12924794
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagattgatagcttttgctt |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
12925172 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaaagatgattgtcgagagatgttgaagagatttatagcttttgctt |
12925073 |
T |
|
| Q |
105 |
t-gagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaa |
203 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12925072 |
ttgagagagataaatgctttgtatttcaaactcttacatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagctaataaa |
12924973 |
T |
|
| Q |
204 |
gagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattct |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12924972 |
gagctgttgtgcttccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcacagatcattct |
12924873 |
T |
|
| Q |
304 |
ctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
383 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12924872 |
ctcagttccaaccaaaacttgaacg-aaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
12924794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 118 - 382
Target Start/End: Original strand, 42712652 - 42712915
Alignment:
| Q |
118 |
tgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
42712652 |
tgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttgaagagcaagccaataaagagctgttgtgctt |
42712751 |
T |
|
| Q |
218 |
ccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
317 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42712752 |
ccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
42712851 |
T |
|
| Q |
318 |
aaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
382 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42712852 |
aaacttgaacg-aaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
42712915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 80 - 382
Target Start/End: Complemental strand, 20037673 - 20037374
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaa |
179 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20037673 |
ttgaagagattgatagcttttgctttgagagagataaatgttatttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagttgaa |
20037574 |
T |
|
| Q |
180 |
tcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgttt |
279 |
Q |
| |
|
||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20037573 |
tcccttggagagcaagctaaaaaagagctgttgtacttccaatttgaatttgaattttggctccaaagagagttggggagaaagcatgtagagaatgttt |
20037474 |
T |
|
| Q |
280 |
cttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcc |
379 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
20037473 |
cttcagtttcgcccagaacattctcttagtcccaacc-aaacttgaacg-aaattgtagagcacgtgcttgc-tagttggtgatgagatgtgaccaagcc |
20037377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 80 - 382
Target Start/End: Complemental strand, 20029912 - 20029613
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaa |
179 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20029912 |
ttgaagagattgatagcttttgctttgagagagataaatgttatttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagttgaa |
20029813 |
T |
|
| Q |
180 |
tcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgttt |
279 |
Q |
| |
|
||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20029812 |
tcccttggagagcaagctaaaaaagagctgttgtccttccaatttgaatttgaattttggctccaaagagagttggggagaaagcatgtagagaatgttt |
20029713 |
T |
|
| Q |
280 |
cttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcc |
379 |
Q |
| |
|
||||||||||||||||| |||||| | ||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
20029712 |
cttcagtttcgcccagaacattcttttagtcccaacc-aaacttgaacg-aaattgtagagcacgtgcttgc-tagttggtgatgagatgtgaccaagcc |
20029616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 33592483 - 33592579
Alignment:
| Q |
80 |
ttgaagagattgatagct--tttgctttgagagagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
33592483 |
ttgaagagattgatagcttgtttgctttgtgaaagataaatgcttttgtatttcaaactcttggtttttgccttggatgtcttcctctatttataga |
33592579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 33602122 - 33602218
Alignment:
| Q |
80 |
ttgaagagattgatagct--tttgctttgagagagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
33602122 |
ttgaagagattgatagcttgtttgctttgtgaaagataaatgcttttgtatttcaaactcttggtttttgccttggatgtcttcctctatttataga |
33602218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 24633787 - 24633712
Alignment:
| Q |
98 |
tttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
24633787 |
tttgctttgagatagataaatgctttgtatttcaaactcttggttttagccttggatgtcttcctctatttataga |
24633712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 18883593 - 18883662
Alignment:
| Q |
108 |
gagagataaatgctttt-tatttcaaa-ctcttgcatttctccttcaatgtcctcttctatttatagagc |
175 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||| |
|
|
| T |
18883593 |
gagagataattgcttttgtatttcaaaactcttgcttttaaccttcaatgacctcttctatttatagagc |
18883662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 42896498 - 42896594
Alignment:
| Q |
80 |
ttgaagagattgatagct--tttgctttgagagagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||||||||| ||||||||| || ||||||||| |||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
42896498 |
ttgaagagattgatagcttgtttgctttgtgaaagataaatgtttttgtatttcaaactcttggtttttgccttggatgtcttcctctatttataga |
42896594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 18232682 - 18232613
Alignment:
| Q |
108 |
gagagataaatgctttt-tatttcaaa-ctcttgcatttctccttcaatgtcctcttctatttatagagc |
175 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
18232682 |
gagagataattgcttttgtatttcaaaactcttgctcttaaccttcaatgacctcttctatttatagagc |
18232613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 18242133 - 18242064
Alignment:
| Q |
108 |
gagagataaatgctttt-tatttcaaa-ctcttgcatttctccttcaatgtcctcttctatttatagagc |
175 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
18242133 |
gagagataattgcttttgtatttcaaaactcttgctcttaaccttcaatgacctcttctatttatagagc |
18242064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 18251584 - 18251515
Alignment:
| Q |
108 |
gagagataaatgctttt-tatttcaaa-ctcttgcatttctccttcaatgtcctcttctatttatagagc |
175 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
18251584 |
gagagataattgcttttgtatttcaaaactcttgctcttaaccttcaatgacctcttctatttatagagc |
18251515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 287; Significance: 1e-161; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 18 - 383
Target Start/End: Complemental strand, 20834249 - 20833872
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagattgatagcttttgctt |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
20834249 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaaagatgattgtcgagagatgttgaagagattgatagcttttgctt |
20834150 |
T |
|
| Q |
105 |
tgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaag |
204 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20834149 |
tgagagagataaatgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaag |
20834050 |
T |
|
| Q |
205 |
agctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctc |
304 |
Q |
| |
|
|| |||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20834049 |
agttgttgtgcttccaatttgaatttgaattttagttccaaagagacttggggagaaagtatgtagagaatgtttcttcagtttcgcccagaacattctc |
20833950 |
T |
|
| Q |
305 |
tcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
383 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20833949 |
tcagtcccaaccaaaacttgaacg-aaattgtagagcatgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
20833872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 382
Target Start/End: Original strand, 33955868 - 33956244
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg---------------aagagattgatagcttttgc |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
33955868 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaaagatgattgtcgaaagagatgttgaagagattgatagcttttgc |
33955967 |
T |
|
| Q |
103 |
tttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataa |
202 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
33955968 |
tttgagagagataaatgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagctaaaaa |
33956067 |
T |
|
| Q |
203 |
agagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattc |
302 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
33956068 |
agagttgttgtgcttccaatttgaatttgaattttggctctaaagagacttggggagaaagcatgtagagaatgtttcttcagttttgcccaggacattc |
33956167 |
T |
|
| Q |
303 |
tctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
382 |
Q |
| |
|
||||||| |||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
33956168 |
tctcagtcccaacc-aaacttgaacg-aaattgtagagcacgtgtttgc-tagttggtgatgagctgcgatcaagccttt |
33956244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 80 - 365
Target Start/End: Complemental strand, 20035731 - 20035449
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagct-ga |
178 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| || || |
|
|
| T |
20035731 |
ttgaagagattgatggcttttgctttgagagagataaatgctttgcatttcaaactcttgcatttctccttcaatgtcctcttttatttatagaactgga |
20035632 |
T |
|
| Q |
179 |
atcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtt |
278 |
Q |
| |
|
|||||||||| | ||||| || |||||| |||| |||||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| |||||||| |
|
|
| T |
20035631 |
atcccttggaaaacaagctaa-aaagagttgttttgcttccaatttaaatttgaaatttggctccaaagagacttgggaagagagcatgtaaagaatgtt |
20035533 |
T |
|
| Q |
279 |
tcttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatga |
365 |
Q |
| |
|
|||||||||| ||||| ||||||| |||| ||| || ||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
20035532 |
tcttcagtttttaccagaacattctcccagtcccatcc-aaacttgaacg-aaattgtagagcacgtgcttgc-tagttggtgatga |
20035449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 11223073 - 11222940
Alignment:
| Q |
81 |
tgaagagattgatagc-ttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatag-agctga |
178 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| ||| |||||| | | || ||||||||||| || || |
|
|
| T |
11223073 |
tgaagagattgatagccttttgctttgagagagataaatgctttgtgtttcaaactcttgcttttaaccttcatagacgtcctctatttatagaagatgt |
11222974 |
T |
|
| Q |
179 |
atcccttggagagcaagccaataaagagctgttg |
212 |
Q |
| |
|
|| |||||||| ||||| || |||||||||||| |
|
|
| T |
11222973 |
atgtcttggagatcaagctaaaaaagagctgttg |
11222940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 22448679 - 22448776
Alignment:
| Q |
81 |
tgaagagattgatagctt--ttgctttgaga--gagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
22448679 |
tgaagagattgatagcttgtttgctttgagagagagataaatgcttttgtatttcaaactcttgatttttgccttggatgtcttcctctatttataga |
22448776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 22457997 - 22458094
Alignment:
| Q |
81 |
tgaagagattgatagctt--ttgctttgaga--gagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
22457997 |
tgaagagattgatagcttgtttgctttgagagagagataaatgcttttgtatttcaaactcttgatttttgccttggatgtcttcctctatttataga |
22458094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 24244475 - 24244544
Alignment:
| Q |
108 |
gagagataaatgctttt-tatttcaaa-ctcttgcatttctccttcaatgtcctcttctatttatagagc |
175 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
24244475 |
gagagataattgcttttgtatttcaaaactcttgctcttaaccttcaatgacctcttctatttatagagc |
24244544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 383
Target Start/End: Original strand, 20884818 - 20885196
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaacttagaaatatgttctcaatgagaaatgatgattg-------------aagagattgatagcttttgctt |
104 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
20884818 |
tatatgtcaaacaaactatcattgtacaaacttagaaatatgttctcaatgagaaaagatgattgtcgagagatgttaaagagattgatagcttttgctt |
20884917 |
T |
|
| Q |
105 |
t-gagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaa |
203 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
20884918 |
ttgagagagataaatgctttctatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaaccccttggagagcaagctaataaa |
20885017 |
T |
|
| Q |
204 |
gagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattct |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20885018 |
gagctgttgtgcttccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagaacattct |
20885117 |
T |
|
| Q |
304 |
ctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcctttg |
383 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
20885118 |
ctcagtcccaaccaaaacttgaacg-aaattgtagagcacgtgcttgcttagttggtgatgaggtgtgatcaaacctttg |
20885196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 118 - 382
Target Start/End: Complemental strand, 35877229 - 35876967
Alignment:
| Q |
118 |
tgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35877229 |
tgctttgtatttcaaactcttgcatttctccttcaatgttctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
35877130 |
T |
|
| Q |
218 |
ccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
317 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35877129 |
ccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
35877030 |
T |
|
| Q |
318 |
aaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
382 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
35877029 |
aaacttgaac-taaattgtagagcacgtgcttgc-tagtaggtgatgagctgtgatcaagccttt |
35876967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 118 - 382
Target Start/End: Complemental strand, 35884718 - 35884456
Alignment:
| Q |
118 |
tgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35884718 |
tgctttgtatttcaaactcttgcatttctccttcaatgttctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
35884619 |
T |
|
| Q |
218 |
ccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
317 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35884618 |
ccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
35884519 |
T |
|
| Q |
318 |
aaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
382 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
35884518 |
aaacttgaac-taaattgtagagcacgtgcttgc-tagtaggtgatgagctgtgatcaagccttt |
35884456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 118 - 382
Target Start/End: Complemental strand, 36724431 - 36724169
Alignment:
| Q |
118 |
tgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
217 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36724431 |
tgctttgtatttcaaactcttgcatttctccttcaatgttctcttctatttatagagctgaatcccttggagagcaagccaataaagagctgttgtgctt |
36724332 |
T |
|
| Q |
218 |
ccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
317 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36724331 |
ccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaacca |
36724232 |
T |
|
| Q |
318 |
aaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
382 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
36724231 |
aaacttgaac-taaattgtagagcacgtgcttgc-tagtaggtgatgagctgtgatcaagccttt |
36724169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 240 - 382
Target Start/End: Complemental strand, 3396593 - 3396455
Alignment:
| Q |
240 |
ctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtaga |
339 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||||||||||||||||| | ||||| |||||||||||| |||| | ||||||||||| |||||||||| |
|
|
| T |
3396593 |
ctccaaagagaattgggaagaaaccatgtagagaatgtttcttcagttttg-ccagaacattctctcagtcccaa-ctaaacttgaacg-aaattgtaga |
3396497 |
T |
|
| Q |
340 |
gcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
382 |
Q |
| |
|
|||||||||||| ||| || ||||||| ||||||||||||||| |
|
|
| T |
3396496 |
gcacgtgcttgc-tagctgatgatgagttgtgatcaagccttt |
3396455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 3396656 - 3396590
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctcc |
148 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
3396656 |
ttgaagagattgacagcttttgctttgagaga--taaatgctttgtatttcaaactcttgcatttctcc |
3396590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 80 - 382
Target Start/End: Complemental strand, 142902 - 142603
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaa |
179 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
142902 |
ttgaagagattgatagctttttctttgagagagataaatgctttgtatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagttgaa |
142803 |
T |
|
| Q |
180 |
tcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgttt |
279 |
Q |
| |
|
||||||||||||| ||| || |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
142802 |
tcccttggagagcgagctaaaaaagagttgttgtgcttccaatttgaatttgaattttggctccaaagagacttggggagaaagcatgtagagaatgttt |
142703 |
T |
|
| Q |
280 |
cttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcc |
379 |
Q |
| |
|
|||||||||| || ||| |||||||||||| |||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
142702 |
cttcagtttcacctagaacattctctcagtgccaacc-aaacttgaacg-aaattgtagagcacatgcttgc-tagttggtgatgagctgtgatcaagcc |
142606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0206 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0206
Description:
Target: scaffold0206; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 80 - 382
Target Start/End: Complemental strand, 1842 - 1543
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaa |
179 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1842 |
ttgaagagattgatagcttttgctttgagagagataaatgttatttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagttgaa |
1743 |
T |
|
| Q |
180 |
tcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgttt |
279 |
Q |
| |
|
||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1742 |
tcccttggagagcaagctaaaaaagagctgttgtccttccaatttgaatttgaattttggctccaaagagagttggggagaaagcatgtagagaatgttt |
1643 |
T |
|
| Q |
280 |
cttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcc |
379 |
Q |
| |
|
||||||||||||||||| |||||| | ||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
1642 |
cttcagtttcgcccagaacattcttttagtcccaacc-aaacttgaacg-aaattgtagagcacgtgcttgc-tagttggtgatgagatgtgaccaagcc |
1546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 80 - 382
Target Start/End: Original strand, 46306027 - 46306320
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaa |
179 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46306027 |
ttgaagagattggtagtttttgctttgagagagataaatgctttgtatttcaaactgttgcttttctccttcaatgtcctcttctatttatagagctgat |
46306126 |
T |
|
| Q |
180 |
tcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgttt |
279 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
46306127 |
tcccttggaaagcaagctaaaaaagagctgttgtgcttccaatttgaattt------tggctccaaagagacttgggaagaaagcatgtagagaatattt |
46306220 |
T |
|
| Q |
280 |
cttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcc |
379 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
46306221 |
cttcagttttgcccagaacattctctcagttccaacc-aaacttgaacg-aaattgtagagcacgtgcttgc-tagttggtgatgagttgtgatcaagcc |
46306317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 80 - 382
Target Start/End: Complemental strand, 5385423 - 5385124
Alignment:
| Q |
80 |
ttgaagagattgatagcttttgctttgagagagataaatgctttttatttcaaactcttgcatttctccttcaatgtcctcttctatttatagagctgaa |
179 |
Q |
| |
|
|||||||| ||||||| |||| ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5385423 |
ttgaagaggttgatagtttttactttgagagagataaatactttgtatttcaaactcttgcttttctccttcaatgtcttcttctatttatagagctgaa |
5385324 |
T |
|
| Q |
180 |
tcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatttgaattatggctccaaagagacttggggagaaagcatgtagagaatgttt |
279 |
Q |
| |
|
||||||||| |||| || || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||| |
|
|
| T |
5385323 |
tcccttggaaagcacgctaaaaaagagctgttgtgcttccaatttgaattagaattttggctccaaagagacttgggaagaaagcatgttgaaaatgttt |
5385224 |
T |
|
| Q |
280 |
cttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagcc |
379 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5385223 |
cttcagttttgcccagaacattctctcagtcccaacc-aaacttgaacg-aaattgtaaagcacgtgcttgc-tagttggtgatgagctgtgatcaagcc |
5385127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 131 - 382
Target Start/End: Original strand, 13328826 - 13329075
Alignment:
| Q |
131 |
aaactcttgcatttctccttcaatgtcctcttctatttatagagctg-aatcccttggagagcaagccaataaagagctgttgtgcttccaatttgaatt |
229 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| || | ||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
13328826 |
aaactcttgcttttctccttcaatgacctcttctatttatagagctggaatcccttagaaatcaagctaaaaaagagctgttgtgcttccaatttgaatt |
13328925 |
T |
|
| Q |
230 |
tgaattatggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacga |
329 |
Q |
| |
|
||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||| |
|
|
| T |
13328926 |
cgaattttggctccaaggagacttgggaagaaagcatgtagagaatgtttcttcagttttgcccagaacattctctcagtcacaacc-aaacttgaacg- |
13329023 |
T |
|
| Q |
330 |
aaattgtagagcacgtgcttgcttagttggtgatgagctgtgatcaagccttt |
382 |
Q |
| |
|
|||||||||| || |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13329024 |
aaattgtagatcatgtgcttgc-tagttggtgatgagctgtgatcaagccttt |
13329075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 381
Target Start/End: Original strand, 13952774 - 13952913
Alignment:
| Q |
238 |
ggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgta |
337 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||| |||||||||| | ||| ||| |||||||| ||| | |||| || |||||||| |||||||| |
|
|
| T |
13952774 |
ggctccaaagagacttggagagaaaccatgtagagaatatttcttcagtct-gcctagaacattctcttagtcctaacc-aatcttgaacg-aaattgta |
13952870 |
T |
|
| Q |
338 |
gagcacgtgcttgcttagttggtgatgagctgtgatcaagcctt |
381 |
Q |
| |
|
|||| || |||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
13952871 |
gagcgcgcgcttgc-tagcttgtgatgagctgtgatcaagcctt |
13952913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 47
Target Start/End: Original strand, 13328645 - 13328674
Alignment:
| Q |
18 |
tatatgtcaaacaaactatccttgtacaaa |
47 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
13328645 |
tatatgtcaaacaaactatccttgtacaaa |
13328674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0771 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0771
Description:
Target: scaffold0771; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 381
Target Start/End: Original strand, 4914 - 5053
Alignment:
| Q |
238 |
ggctccaaagagacttggggagaaagcatgtagagaatgtttcttcagtttcgcccagatcattctctcagttccaaccaaaacttgaacgaaaattgta |
337 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||| |||||||||| | ||| ||| |||||||| ||| | |||| || |||||||| |||||||| |
|
|
| T |
4914 |
ggctccaaagagacttggagagaaaccatgtagagaatatttcttcagtct-gcctagaacattctcttagtcctaacc-aatcttgaacg-aaattgta |
5010 |
T |
|
| Q |
338 |
gagcacgtgcttgcttagttggtgatgagctgtgatcaagcctt |
381 |
Q |
| |
|
|||| || |||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
5011 |
gagcgcgcgcttgc-tagcttgtgatgagctgtgatcaagcctt |
5053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0334 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0334
Description:
Target: scaffold0334; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 12892 - 12988
Alignment:
| Q |
80 |
ttgaagagattgatagctt--ttgctttgagagagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||| || |||||||||||| |
|
|
| T |
12892 |
ttgaagagattgatagcttgtttgctttgagagagataaatgcttttgtatttcaaactcttggttttcgccttatttgtcttcctctatttataga |
12988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 256712 - 256643
Alignment:
| Q |
108 |
gagagataaatgctttt-tatttcaaa-ctcttgcatttctccttcaatgtcctcttctatttatagagc |
175 |
Q |
| |
|
||||||||| ||||||| ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||| |
|
|
| T |
256712 |
gagagataattgcttttgtatttcaaaactcttgcttttaaccttcaatgacctcttctatttatagagc |
256643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 2610 - 2707
Alignment:
| Q |
81 |
tgaagagattgatagctt--ttgctttgaga--gagataaatgctttt-tatttcaaactcttgcatttctccttcaatgtcctcttctatttataga |
173 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| ||| |||| ||||| || |||||||||||| |
|
|
| T |
2610 |
tgaagaaattgatagcttgtttgctttgagagagagataaatgcttttgtatttcaaactcttgattttagccttggatgtcttcctctatttataga |
2707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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