View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18018_high_12 (Length: 424)

Name: NF18018_high_12
Description: NF18018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18018_high_12
NF18018_high_12
[»] chr4 (64 HSPs)
chr4 (293-409)||(31917512-31917628)
chr4 (328-412)||(33246385-33246469)
chr4 (306-409)||(54701159-54701265)
chr4 (328-409)||(24072903-24072985)
chr4 (299-412)||(40411201-40411315)
chr4 (299-412)||(43800941-43801055)
chr4 (328-412)||(5536617-5536702)
chr4 (299-412)||(31936952-31937067)
chr4 (305-412)||(31840229-31840336)
chr4 (299-412)||(25477358-25477471)
chr4 (299-412)||(52198587-52198700)
chr4 (330-406)||(8246387-8246464)
chr4 (330-406)||(8250516-8250593)
chr4 (299-411)||(12624830-12624943)
chr4 (328-412)||(22651597-22651682)
chr4 (299-412)||(50782906-50783018)
chr4 (327-412)||(54359816-54359901)
chr4 (299-407)||(37624982-37625092)
chr4 (329-407)||(30153112-30153190)
chr4 (299-409)||(51918513-51918625)
chr4 (328-407)||(10602097-10602177)
chr4 (299-412)||(38136488-38136597)
chr4 (328-396)||(39196920-39196988)
chr4 (328-396)||(43509232-43509300)
chr4 (328-412)||(51787904-51787988)
chr4 (328-412)||(52552399-52552483)
chr4 (328-412)||(52226152-52226238)
chr4 (329-406)||(31486627-31486705)
chr4 (298-412)||(19654561-19654677)
chr4 (336-412)||(41945668-41945745)
chr4 (337-409)||(20262292-20262363)
chr4 (329-412)||(22750730-22750814)
chr4 (299-412)||(39237446-39237561)
chr4 (306-412)||(44812472-44812579)
chr4 (343-409)||(7002319-7002385)
chr4 (344-412)||(14602554-14602625)
chr4 (328-405)||(34543846-34543923)
chr4 (328-412)||(46729438-46729523)
chr4 (336-409)||(13096436-13096511)
chr4 (306-398)||(16070579-16070671)
chr4 (328-409)||(20293883-20293966)
chr4 (353-409)||(56373257-56373313)
chr4 (299-409)||(5168115-5168226)
chr4 (329-412)||(21171857-21171940)
chr4 (328-412)||(26203263-26203349)
chr4 (343-412)||(39414367-39414437)
chr4 (320-396)||(5933036-5933112)
chr4 (328-412)||(48472383-48472467)
chr4 (327-386)||(3113524-3113583)
chr4 (342-412)||(20116584-20116655)
chr4 (334-412)||(32236964-32237045)
chr4 (328-408)||(20792128-20792209)
chr4 (368-408)||(21473723-21473763)
chr4 (336-396)||(50438209-50438269)
chr4 (327-394)||(3094486-3094553)
chr4 (330-409)||(5448798-5448875)
chr4 (369-412)||(10541186-10541229)
chr4 (328-406)||(20291478-20291557)
chr4 (329-407)||(3684076-3684154)
chr4 (299-389)||(30050142-30050232)
chr4 (365-395)||(56216688-56216718)
chr4 (342-412)||(36513201-36513273)
chr4 (299-396)||(54438661-54438757)
chr4 (342-390)||(30866789-30866836)
[»] chr2 (54 HSPs)
chr2 (299-412)||(41665843-41665955)
chr2 (228-300)||(16637497-16637569)
chr2 (328-412)||(31644330-31644414)
chr2 (328-412)||(44424728-44424811)
chr2 (299-412)||(27749600-27749714)
chr2 (299-412)||(8064931-8065044)
chr2 (320-407)||(4398463-4398550)
chr2 (299-412)||(14420809-14420923)
chr2 (299-412)||(17663757-17663871)
chr2 (299-412)||(20362115-20362229)
chr2 (326-412)||(25731073-25731158)
chr2 (306-412)||(41865848-41865955)
chr2 (299-412)||(534598-534712)
chr2 (328-412)||(28733956-28734041)
chr2 (328-412)||(15851664-15851750)
chr2 (6-72)||(16637569-16637636)
chr2 (327-412)||(11071800-11071888)
chr2 (329-411)||(34330136-34330217)
chr2 (327-412)||(38449600-38449686)
chr2 (329-412)||(27297710-27297794)
chr2 (328-409)||(37355172-37355255)
chr2 (299-412)||(45214858-45214972)
chr2 (329-412)||(7278501-7278585)
chr2 (327-412)||(28264839-28264926)
chr2 (299-408)||(45150600-45150711)
chr2 (318-412)||(2048707-2048802)
chr2 (299-386)||(41327662-41327749)
chr2 (332-412)||(7255734-7255813)
chr2 (328-409)||(9718059-9718141)
chr2 (305-410)||(24775000-24775106)
chr2 (331-412)||(38981961-38982041)
chr2 (330-412)||(3326857-3326943)
chr2 (327-404)||(8667725-8667804)
chr2 (307-412)||(13534538-13534644)
chr2 (342-411)||(37037474-37037544)
chr2 (327-412)||(23464816-23464900)
chr2 (327-396)||(40345962-40346031)
chr2 (365-412)||(2521224-2521272)
chr2 (328-396)||(4033976-4034044)
chr2 (327-408)||(17250846-17250929)
chr2 (365-409)||(29971396-29971440)
chr2 (368-412)||(36174720-36174764)
chr2 (365-412)||(38107637-38107685)
chr2 (343-412)||(44274420-44274491)
chr2 (299-398)||(247808-247907)
chr2 (304-391)||(12417532-12417619)
chr2 (304-391)||(12429592-12429679)
chr2 (365-412)||(35178986-35179033)
chr2 (299-412)||(1246270-1246384)
chr2 (328-386)||(3237875-3237933)
chr2 (328-394)||(44284848-44284914)
chr2 (329-406)||(44421872-44421950)
chr2 (334-412)||(2131890-2131968)
chr2 (365-412)||(32677608-32677657)
[»] chr8 (52 HSPs)
chr8 (328-412)||(31746294-31746378)
chr8 (329-412)||(25198422-25198505)
chr8 (327-409)||(57075-57158)
chr8 (299-412)||(24962224-24962338)
chr8 (299-412)||(43980442-43980556)
chr8 (299-412)||(45283346-45283459)
chr8 (328-405)||(39543548-39543627)
chr8 (309-396)||(38761225-38761312)
chr8 (299-412)||(12762975-12763088)
chr8 (299-412)||(31252514-31252628)
chr8 (299-412)||(40517873-40517987)
chr8 (320-409)||(1769329-1769418)
chr8 (328-405)||(7172359-7172435)
chr8 (332-412)||(37600779-37600860)
chr8 (299-412)||(24512025-24512140)
chr8 (328-407)||(40807899-40807979)
chr8 (328-412)||(26878616-26878701)
chr8 (305-408)||(34158053-34158157)
chr8 (329-406)||(37141864-37141943)
chr8 (328-392)||(40601928-40601992)
chr8 (304-407)||(17933843-17933945)
chr8 (294-408)||(38773202-38773317)
chr8 (304-412)||(43191345-43191450)
chr8 (329-409)||(4273855-4273936)
chr8 (336-412)||(5191445-5191522)
chr8 (299-396)||(41087123-41087220)
chr8 (327-409)||(45185153-45185237)
chr8 (329-412)||(3006013-3006097)
chr8 (328-412)||(7772645-7772729)
chr8 (299-412)||(25185163-25185280)
chr8 (292-412)||(1177007-1177129)
chr8 (330-412)||(10396120-10396203)
chr8 (329-412)||(30262429-30262511)
chr8 (327-409)||(40337078-40337161)
chr8 (330-412)||(45183752-45183835)
chr8 (327-406)||(41371688-41371771)
chr8 (329-405)||(10860860-10860937)
chr8 (329-409)||(31673733-31673814)
chr8 (328-412)||(38202880-38202965)
chr8 (295-398)||(885608-885711)
chr8 (365-412)||(36437634-36437683)
chr8 (365-409)||(14522269-14522314)
chr8 (336-396)||(16357137-16357197)
chr8 (369-412)||(45203891-45203935)
chr8 (344-398)||(11444108-11444162)
chr8 (298-391)||(2303247-2303340)
chr8 (298-391)||(2327841-2327934)
chr8 (329-386)||(37956274-37956331)
chr8 (328-412)||(40790921-40791006)
chr8 (342-412)||(22590508-22590579)
chr8 (368-412)||(12998616-12998661)
chr8 (336-408)||(23399675-23399746)
[»] chr3 (54 HSPs)
chr3 (328-412)||(42891551-42891635)
chr3 (299-412)||(44083759-44083873)
chr3 (299-412)||(29676601-29676713)
chr3 (328-412)||(50524865-50524950)
chr3 (327-412)||(12077629-12077717)
chr3 (299-412)||(26517075-26517189)
chr3 (328-412)||(20945189-20945274)
chr3 (299-396)||(29645473-29645570)
chr3 (328-412)||(26999176-26999260)
chr3 (304-412)||(28477517-28477625)
chr3 (305-412)||(14645755-14645863)
chr3 (299-412)||(31530988-31531102)
chr3 (327-410)||(46048657-46048741)
chr3 (329-412)||(11140829-11140912)
chr3 (342-412)||(11388255-11388326)
chr3 (299-409)||(43186961-43187072)
chr3 (294-405)||(44698376-44698487)
chr3 (306-412)||(40645806-40645911)
chr3 (328-412)||(41308666-41308750)
chr3 (329-412)||(31819538-31819622)
chr3 (299-412)||(35145363-35145477)
chr3 (329-412)||(31474556-31474639)
chr3 (328-409)||(26043152-26043233)
chr3 (327-408)||(29349514-29349596)
chr3 (328-406)||(53716857-53716935)
chr3 (343-412)||(21933058-21933128)
chr3 (327-412)||(41727126-41727212)
chr3 (331-412)||(13084252-13084332)
chr3 (303-396)||(39617116-39617209)
chr3 (299-412)||(11345449-11345566)
chr3 (328-412)||(50363159-50363241)
chr3 (329-412)||(831248-831334)
chr3 (331-397)||(25750666-25750733)
chr3 (355-412)||(5504491-5504549)
chr3 (367-412)||(30476173-30476219)
chr3 (350-412)||(44338213-44338275)
chr3 (327-406)||(22659718-22659798)
chr3 (329-409)||(34055755-34055835)
chr3 (365-409)||(35055921-35055965)
chr3 (350-412)||(11396855-11396918)
chr3 (328-410)||(12236446-12236524)
chr3 (365-407)||(33288003-33288045)
chr3 (343-412)||(48309576-48309645)
chr3 (336-392)||(50092822-50092878)
chr3 (328-409)||(3475582-3475667)
chr3 (365-408)||(6719305-6719348)
chr3 (343-409)||(41739877-41739944)
chr3 (328-402)||(33411865-33411939)
chr3 (296-389)||(9178462-9178550)
chr3 (350-406)||(4979535-4979591)
chr3 (364-396)||(27047105-27047137)
chr3 (350-413)||(39932042-39932106)
chr3 (351-395)||(46435643-46435687)
chr3 (365-409)||(52325431-52325474)
[»] chr7 (44 HSPs)
chr7 (299-409)||(10685221-10685331)
chr7 (328-412)||(4089388-4089472)
chr7 (299-407)||(18121902-18122009)
chr7 (299-412)||(48767698-48767812)
chr7 (299-412)||(19235923-19236039)
chr7 (336-412)||(1324841-1324917)
chr7 (299-409)||(21759856-21759967)
chr7 (299-412)||(35128517-35128632)
chr7 (298-408)||(21388379-21388490)
chr7 (327-412)||(33181428-33181512)
chr7 (328-412)||(5333786-5333872)
chr7 (329-412)||(48610026-48610108)
chr7 (302-388)||(8318689-8318775)
chr7 (290-380)||(43601017-43601107)
chr7 (328-412)||(36726059-36726146)
chr7 (303-412)||(26632979-26633089)
chr7 (332-404)||(29635932-29636005)
chr7 (329-409)||(34118146-34118227)
chr7 (299-396)||(43465004-43465101)
chr7 (299-412)||(37491478-37491591)
chr7 (350-412)||(40741085-40741147)
chr7 (329-412)||(31365712-31365794)
chr7 (369-412)||(28663888-28663931)
chr7 (341-412)||(41672433-41672506)
chr7 (336-409)||(47458082-47458156)
chr7 (326-407)||(29723599-29723680)
chr7 (334-405)||(46783735-46783807)
chr7 (298-409)||(2276436-2276546)
chr7 (330-412)||(37673870-37673953)
chr7 (328-386)||(20123606-20123663)
chr7 (336-398)||(25098281-25098343)
chr7 (371-412)||(35960512-35960553)
chr7 (350-412)||(40211079-40211142)
chr7 (296-356)||(20124362-20124422)
chr7 (329-409)||(37048170-37048248)
chr7 (343-412)||(37136314-37136385)
chr7 (328-412)||(49100804-49100893)
chr7 (365-407)||(27162827-27162870)
chr7 (373-408)||(29993153-29993188)
chr7 (367-396)||(27213638-27213667)
chr7 (329-412)||(6376020-6376104)
chr7 (369-412)||(21809575-21809619)
chr7 (369-408)||(23876174-23876214)
chr7 (329-408)||(42983502-42983582)
[»] chr6 (31 HSPs)
chr6 (328-412)||(30248995-30249079)
chr6 (299-412)||(19839064-19839178)
chr6 (342-412)||(28238216-28238286)
chr6 (306-409)||(9461429-9461533)
chr6 (295-412)||(31945767-31945885)
chr6 (336-412)||(34513115-34513191)
chr6 (328-407)||(16186707-16186788)
chr6 (328-412)||(6791509-6791594)
chr6 (328-408)||(15981931-15982012)
chr6 (329-405)||(30465857-30465934)
chr6 (334-408)||(16327261-16327336)
chr6 (334-408)||(16350659-16350734)
chr6 (343-412)||(33607488-33607556)
chr6 (299-409)||(1763949-1764060)
chr6 (328-409)||(22410730-22410812)
chr6 (342-412)||(31486964-31487035)
chr6 (327-393)||(197336-197402)
chr6 (365-412)||(3887867-3887915)
chr6 (328-396)||(31536163-31536231)
chr6 (350-412)||(11082518-11082579)
chr6 (356-412)||(5895864-5895921)
chr6 (328-412)||(10260491-10260578)
chr6 (328-412)||(11302988-11303075)
chr6 (369-412)||(3729555-3729598)
chr6 (365-395)||(12514504-12514534)
chr6 (336-398)||(27442538-27442598)
chr6 (331-408)||(5457324-5457400)
chr6 (365-413)||(12802825-12802871)
chr6 (365-412)||(12503533-12503583)
chr6 (368-412)||(31062460-31062503)
chr6 (350-411)||(31780259-31780322)
[»] chr1 (62 HSPs)
chr1 (298-412)||(5084945-5085060)
chr1 (328-409)||(51390424-51390505)
chr1 (329-412)||(48721756-48721839)
chr1 (299-412)||(15512638-15512752)
chr1 (299-412)||(28948821-28948935)
chr1 (327-412)||(47753922-47754008)
chr1 (329-412)||(3831179-3831263)
chr1 (299-412)||(5321879-5321994)
chr1 (336-412)||(32047573-32047649)
chr1 (306-412)||(52141039-52141146)
chr1 (329-413)||(30898450-30898535)
chr1 (329-409)||(34012622-34012702)
chr1 (329-412)||(46732848-46732931)
chr1 (328-412)||(28334106-28334192)
chr1 (306-412)||(36085102-36085209)
chr1 (299-412)||(32715925-32716038)
chr1 (329-407)||(46495447-46495525)
chr1 (328-412)||(25269509-25269593)
chr1 (328-396)||(44163372-44163439)
chr1 (328-392)||(47643693-47643757)
chr1 (327-409)||(7957572-7957657)
chr1 (328-405)||(34696769-34696847)
chr1 (328-412)||(33231972-33232057)
chr1 (328-412)||(25063342-25063429)
chr1 (328-412)||(32152290-32152373)
chr1 (329-405)||(34102503-34102578)
chr1 (328-392)||(35365868-35365932)
chr1 (328-407)||(51997093-51997173)
chr1 (340-409)||(10160846-10160917)
chr1 (305-412)||(3143535-3143644)
chr1 (336-406)||(5852598-5852668)
chr1 (329-412)||(28723537-28723622)
chr1 (328-407)||(4817792-4817872)
chr1 (328-407)||(4829592-4829672)
chr1 (308-396)||(9684582-9684670)
chr1 (336-412)||(25258463-25258539)
chr1 (339-409)||(29302386-29302457)
chr1 (331-408)||(3072273-3072350)
chr1 (343-406)||(4813362-4813427)
chr1 (327-412)||(46591234-46591320)
chr1 (343-408)||(9380663-9380727)
chr1 (320-404)||(16395430-16395512)
chr1 (328-392)||(24415142-24415206)
chr1 (327-412)||(23982477-23982563)
chr1 (358-412)||(44652777-44652832)
chr1 (350-408)||(15911461-15911519)
chr1 (329-402)||(49033815-49033889)
chr1 (350-412)||(13723377-13723443)
chr1 (293-394)||(41737221-41737322)
chr1 (365-412)||(8877904-8877952)
chr1 (365-412)||(13145550-13145598)
chr1 (365-408)||(13698967-13699011)
chr1 (336-392)||(15179564-15179619)
chr1 (368-412)||(17426652-17426696)
chr1 (309-396)||(44395687-44395774)
chr1 (350-407)||(13352970-13353028)
chr1 (350-407)||(20564912-20564972)
chr1 (365-409)||(8984585-8984630)
chr1 (365-412)||(4082058-4082106)
chr1 (336-396)||(12844037-12844097)
chr1 (299-367)||(31305447-31305515)
chr1 (368-404)||(32321895-32321931)
[»] scaffold1091 (1 HSPs)
scaffold1091 (328-412)||(1800-1885)
[»] scaffold0038 (1 HSPs)
scaffold0038 (342-412)||(38378-38448)
[»] chr5 (45 HSPs)
chr5 (296-409)||(27642638-27642752)
chr5 (299-412)||(39690343-39690457)
chr5 (328-412)||(3631004-3631088)
chr5 (336-412)||(4738763-4738839)
chr5 (299-407)||(15898319-15898429)
chr5 (328-412)||(21912253-21912338)
chr5 (305-412)||(25017534-25017645)
chr5 (328-412)||(27925406-27925491)
chr5 (321-412)||(5845309-5845401)
chr5 (306-412)||(35568869-35568976)
chr5 (299-409)||(36177428-36177540)
chr5 (329-412)||(15966971-15967054)
chr5 (328-412)||(10523159-10523245)
chr5 (299-398)||(36750633-36750732)
chr5 (327-412)||(20975690-20975776)
chr5 (312-393)||(129758-129839)
chr5 (327-396)||(7510689-7510758)
chr5 (329-409)||(38972015-38972095)
chr5 (327-409)||(5151086-5151169)
chr5 (328-412)||(9946243-9946329)
chr5 (336-409)||(3558921-3558995)
chr5 (299-412)||(31641047-31641163)
chr5 (329-406)||(10934145-10934221)
chr5 (328-412)||(29866322-29866407)
chr5 (328-412)||(34877799-34877884)
chr5 (328-396)||(4857379-4857447)
chr5 (329-412)||(36347488-36347572)
chr5 (328-412)||(18729725-18729810)
chr5 (366-411)||(16039-16085)
chr5 (343-412)||(7736113-7736183)
chr5 (328-386)||(25690539-25690597)
chr5 (328-401)||(32401341-32401414)
chr5 (330-412)||(40979098-40979183)
chr5 (365-412)||(8717882-8717930)
chr5 (331-406)||(43454121-43454196)
chr5 (355-412)||(21574792-21574852)
chr5 (327-387)||(29874465-29874526)
chr5 (367-409)||(10656725-10656768)
chr5 (329-392)||(19281376-19281439)
chr5 (331-394)||(27798308-27798371)
chr5 (340-397)||(16496740-16496798)
chr5 (365-407)||(23648030-23648072)
chr5 (365-407)||(23810501-23810543)
chr5 (365-405)||(33862797-33862838)
chr5 (328-376)||(27588011-27588059)
[»] scaffold0013 (1 HSPs)
scaffold0013 (328-412)||(49270-49354)
[»] scaffold0182 (1 HSPs)
scaffold0182 (328-412)||(22561-22647)
[»] scaffold0559 (1 HSPs)
scaffold0559 (330-407)||(6647-6725)
[»] scaffold0121 (1 HSPs)
scaffold0121 (329-412)||(24192-24276)
[»] scaffold0005 (1 HSPs)
scaffold0005 (344-412)||(214753-214824)
[»] scaffold0009 (1 HSPs)
scaffold0009 (329-412)||(25831-25916)
[»] scaffold0003 (1 HSPs)
scaffold0003 (336-398)||(44763-44823)


Alignment Details
Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 31917628 - 31917512
Alignment:
Q  293 aaaatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||| |||| ||||||||||||| |||||||  |||||||| ||||||||| ||| |||||||||||||| |||||||||||||||||||||||| |||    
T  31917628 aaaatttactccctccgtccttatatttaagcactcatttgattttatttttatccttaaatgtaaaccctttttcaaattactagatgcatttatgatt 31917529  T
Q  393 ttttcctaaacataccc 409  Q
    |||||||||||||||||    
T  31917528 ttttcctaaacataccc 31917512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 33246385 - 33246469
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  33246385 catttgattttatttttgtccctaaatgtaaactctttttcaaattactagatgcatttattatttttttctaaacatactccta 33246469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 409
Target Start/End: Original strand, 54701159 - 54701265
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcat---ttattattttttcctaaa 402  Q
    ||||||||||| | |||||  |||||||||||||||||||||||||||||||||||   |||||||||||||||| |||   ||||||||||||||||||    
T  54701159 tccgtccttatatctaagcactcatttgactttatttttgtccataaatgtaaacctcttttcaaattactagatacatttattattattttttcctaaa 54701258  T
Q  403 cataccc 409  Q
    |||||||    
T  54701259 cataccc 54701265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 24072985 - 24072903
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccc 409  Q
    ||||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  24072985 catttgattttatttttgtccataaatataaaccccttttcaaattactagatgcatttattatttttttcctaaacataccc 24072903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 40411201 - 40411315
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttc 397  Q
    |||| ||||||||| ||| ||||||| | ||||||| ||||||||||||| ||| ||||||| |  |||||||||||||||||||||||||| |||||||    
T  40411201 tactccctccgtccatatatttaagcatccatttgattttatttttgtccctaattgtaaactccttttcaaattactagatgcatttattatttttttc 40411300  T
Q  398 ctaaacataccccta 412  Q
     ||||||||||||||    
T  40411301 ttaaacataccccta 40411315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 43801055 - 43800941
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  43801055 tactccctccgtccctatatctaagcccccatttgactttatttttgtccctaaatgtaaaccccctttcaaattactagatacatttattattattttc 43800956  T
Q  398 ctaaacataccccta 412  Q
    ||||| |||||||||    
T  43800955 ctaaatataccccta 43800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 5536702 - 5536617
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttt-tcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5536702 catttgattttatttttgtccctaaatgtaaacctcttttcaaattactagatgcatttattatttttctcctaaacataccccta 5536617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 31936952 - 31937067
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--ttttt 396  Q
    |||||||||||||| ||| | ||||| |  |||| ||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||  |||||    
T  31936952 tacttcctccgtccctatatctaagcatctatttaactttatttttgtccctaaatgtaaatcccttttcaaattactagatgcatttattattattttt 31937051  T
Q  397 cctaaacataccccta 412  Q
    ||||||||||| ||||    
T  31937052 cctaaacatactccta 31937067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 412
Target Start/End: Complemental strand, 31840336 - 31840229
Alignment:
Q  305 ctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaaca 404  Q
    |||||||| ||| | ||||| ||||||||||||||||||||||| ||||| |||||||  |||||||||| ||||||||||||| || |||| |||||||    
T  31840336 ctccgtccctatttctaagcattcatttgactttatttttgtccctaaatataaaccccttttcaaattattagatgcatttatcatatttttctaaaca 31840237  T
Q  405 taccccta 412  Q
    || |||||    
T  31840236 tatcccta 31840229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 25477471 - 25477358
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    ||||||||||||||| || | |||||  |||||||| ||||||||||||| |||||||| ||    |||||||||||||||||||||||||||| |||||    
T  25477471 tacttcctccgtcct-atatctaagcactcatttgattttatttttgtccctaaatgtatacttattttcaaattactagatgcatttattatttttttc 25477373  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  25477372 ctaaacataccccta 25477358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 52198587 - 52198700
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttc 397  Q
    |||||||||||||| ||| | |||||   ||||||| |||| |||||||| |||||||||||||  |||||||||||||||| ||||||||| |||||||    
T  52198587 tacttcctccgtccctatatgtaagcacccatttga-tttagttttgtccctaaatgtaaaccccttttcaaattactagatacatttattatttttttc 52198685  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  52198686 ctaaacataccccta 52198700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 8246464 - 8246387
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacata 406  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||    
T  8246464 tttgacttaatttttgtccataaatgtaaaccctcttttaaattactagatgtatttattatttttttcctaaacata 8246387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 8250593 - 8250516
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacata 406  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||    
T  8250593 tttgacttaatttttgtccataaatgtaaaccctcttttaaattactagatgtatttattatttttttcctaaacata 8250516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 299 - 411
Target Start/End: Complemental strand, 12624943 - 12624830
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||| |||| |||||    
T  12624943 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatgcatttactattattttc 12624844  T
Q  398 ctaaacatacccct 411  Q
    ||||||||||||||    
T  12624843 ctaaacatacccct 12624830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 22651682 - 22651597
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||| ||||||||| ||| ||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22651682 catttgattttatttttatccttaaatgtaaactccttttcaaattactagatgcatttattatttttttcctaaacataccccta 22651597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 50783018 - 50782906
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||||||||||||| ||| | |||||   ||||||| ||||||||||| | ||||| ||| |||| ||| || |||||||||||||||||||||||||||    
T  50783018 tacttcctccgtccctatatctaagcacccatttgattttatttttgttcctaaatataaccccttttt-aagttactagatgcatttattattttttcc 50782920  T
Q  399 taaacataccccta 412  Q
    ||||||||||||||    
T  50782919 taaacataccccta 50782906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 54359901 - 54359816
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| | ||||||||||||  ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54359901 tcatttaattttatttttgtctttaaatgtaaaccacttttcaaattactagatgcatttattattttttcctaaacatacaccta 54359816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 37624982 - 37625092
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--ttttt 396  Q
    |||||| ||||| | ||| |||||||  |||||||| ||||||||||||| ||||||||||||   |||||||||| ||||||||||||||||  |||||    
T  37624982 tacttcatccgttcctatatttaagcactcatttgattttatttttgtccctaaatgtaaacctcttttcaaattattagatgcatttattattattttt 37625081  T
Q  397 cctaaacatac 407  Q
    |||||||||||    
T  37625082 cctaaacatac 37625092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 30153112 - 30153190
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    |||||||||||||||||||  |||||||||| ||  ||| |||||| ||||||||||||||||||||||||||||||||    
T  30153112 atttgactttatttttgtctctaaatgtaaatccatttttaaattattagatgcatttattattttttcctaaacatac 30153190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 51918513 - 51918625
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaa--accctatttcaaattactagatgcatttattatttttt 396  Q
    |||| |||||||| |||| | |||||   ||||||| ||||||||||||| |||||||||  | ||  ||||||||||||||||||||||||||||||||    
T  51918513 tactccctccgtctttatatctaagcacccatttgattttatttttgtccctaaatgtaattatcccttttcaaattactagatgcatttattatttttt 51918612  T
Q  397 cctaaacataccc 409  Q
    ||| |||||||||    
T  51918613 cctcaacataccc 51918625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 10602097 - 10602177
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacatac 407  Q
    ||||| ||||||||||||||||||||||||||| |  ||| ||||||||||||||||| |||| |||||||||||||||||    
T  10602097 cattttactttatttttgtccataaatgtaaactcctttttaaattactagatgcattcattatttttttcctaaacatac 10602177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 38136597 - 38136488
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||| ||||||||  ||| ||||||| | ||||||||||||||||| ||||||||||||||| |  |||||||||||||||| |||||    ||||||||    
T  38136597 tactccctccgtctctatatttaagcatccatttgactttatttttatccataaatgtaaactccttttcaaattactagatacattt----ttttttcc 38136502  T
Q  399 taaacataccccta 412  Q
    | ||||||||||||    
T  38136501 tgaacataccccta 38136488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 39196920 - 39196988
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||||||||||| ||||||||||   | ||||||||||||||||||||||||||||||||    
T  39196920 catttgactttatttttgtccctaaatgtaaattatttttcaaattactagatgcatttattatttttt 39196988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 43509300 - 43509232
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||||| |||||||||||||||||||||    
T  43509300 catttgactttatttttgtccctaaatgtaaactccttttcaaattattagatgcatttattatttttt 43509232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 51787988 - 51787904
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||||| ||||| |  ||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  51787988 catttgattttatttttgtccttaaatataaactcctttttaaattactagatacatttattattttttcctaaacatatcccta 51787904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 52552399 - 52552483
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| ||||| |||| ||  ||| |||||| ||||| |||||||||||||||| ||||||||||||||    
T  52552399 catttgactttatttttgtccctaaatataaatccctttttaaattattagatacatttattattttttcttaaacataccccta 52552483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 52226238 - 52226152
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccccta 412  Q
    ||||| ||||| ||||||||| ||||||||||| |  |||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  52226238 catttaactttgtttttgtccttaaatgtaaacacattttcaaattactagatgcatttattattatttttcttaaacataccccta 52226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 406
Target Start/End: Complemental strand, 31486705 - 31486627
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacata 406  Q
    |||||||||||||||||||  |||||||||||||  ||||||||||||| || ||||||||||| ||||||||||||||    
T  31486705 atttgactttatttttgtctttaaatgtaaaccccttttcaaattactaaattcatttattattattttcctaaacata 31486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 412
Target Start/End: Complemental strand, 19654677 - 19654561
Alignment:
Q  298 gtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--ttt 395  Q
    ||||||||||||| ||||| | ||||| | ||||||| ||||||||  ||| ||||||||||| || |||||||||| || |||| |||||||||  |||    
T  19654677 gtacttcctccgttcttatatctaagcatccatttgattttattttcatccctaaatgtaaactctttttcaaattattaaatgcgtttattattttttt 19654578  T
Q  396 tcctaaacataccccta 412  Q
    |||||||||||| ||||    
T  19654577 tcctaaacatactccta 19654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 41945668 - 41945745
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||||| |||||||||| ||  ||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  41945668 tttatttttgtccctaaatgtaaatcccttttcaaattactatatgcatttattatttttttcctaaacatactccta 41945745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 409
Target Start/End: Original strand, 20262292 - 20262363
Alignment:
Q  337 ttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||||||||||| ||||||| |||||||||||    
T  20262292 ttatttttgtccctaaatgtaaacccattttcaaattactaaatgcatttatt-ttttttcttaaacataccc 20262363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 22750730 - 22750814
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||| ||||||||||| | ||||| |||| ||| |||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  22750730 atttgattttatttttgttcctaaatctaaatcctttttcaaattagtagatgcatttattattattttcctatacataccccta 22750814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 39237446 - 39237561
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctattt-caaattactagatgcatttatta-tttttt 396  Q
    |||| ||||||||| | | | ||||| ||||||||| ||||||| ||||  ||||| |||| ||| ||| |||||||||||||| |||||||| ||||||    
T  39237446 tactccctccgtccatgtatctaagcattcatttgattttatttctgtctctaaatataaaaccttttttcaaattactagatgtatttattattttttt 39237545  T
Q  397 cctaaacataccccta 412  Q
    ||||||||||||||||    
T  39237546 cctaaacataccccta 39237561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 412
Target Start/End: Original strand, 44812472 - 44812579
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaaca 404  Q
    ||||||||||| | ||||| ||||||||| ||||||||||||||||| || ||| ||  ||| ||| || || |||||||||||| |||||||||||| |    
T  44812472 tccgtccttatatctaagcattcatttgattttatttttgtccataattgaaaatccctttttaaagtattatatgcatttattatttttttcctaaaga 44812571  T
Q  405 taccccta 412  Q
    ||||||||    
T  44812572 taccccta 44812579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 7002385 - 7002319
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||| ||||| ||||||   ||||||||||||||||| |||||||||||||||||||||||||||    
T  7002385 ttgtccctaaatataaacctcttttcaaattactagatgtatttattattttttcctaaacataccc 7002319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 14602554 - 14602625
Alignment:
Q  344 tgtccataaatgtaaaccctatttcaaattactagatgcatttattat---tttttcctaaacataccccta 412  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||   ||||| |||||||||||||||    
T  14602554 tgtccttaaatgtaaaccccttttcaaattactagatgcatttattatatattttttctaaacataccccta 14602625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 34543923 - 34543846
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacat 405  Q
    ||||||| ||| ||||||| | ||| |||||||    |||||||||||||||||||||||||||||||||||||||||    
T  34543923 catttgattttctttttgttcctaattgtaaacttcttttcaaattactagatgcatttattattttttcctaaacat 34543846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 46729523 - 46729438
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| |||||||||| |   ||| |||||| ||||||||||||||||| |||||| |||||||||||||    
T  46729523 catttgattttatttttgtccctaaatgtaaatctctttttaaattattagatgcatttattatttttttcccaaacataccccta 46729438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 13096436 - 13096511
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccc 409  Q
    ||||||||| ||| |||||| ||||||  |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  13096436 tttatttttatccctaaatgcaaaccccttttcaaattactagatacatttattattatttttcctaaacataccc 13096511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 16070671 - 16070579
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    ||||||| ||| | ||||| | ||||| | || |||||| ||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  16070671 tccgtccctatatctaagcctccatttaatttaatttttatccctaaatgtaaaccccattttaaattactagatgtatttattattttttcc 16070579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 20293966 - 20293883
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--ttttcctaaacataccc 409  Q
    ||||||| ||||||||| | ||||||||| ||| |  |||||||||| |||||||||||||||||  |||||||||||||||||    
T  20293966 catttgattttattttttttcataaatgtgaactcattttcaaattattagatgcatttattattttttttcctaaacataccc 20293883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 56373257 - 56373313
Alignment:
Q  353 atgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||| |||||    
T  56373257 atgtaaacgctctttcaaattactggatgcatttattattttttcctaaacgtaccc 56373313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 5168226 - 5168115
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgca-tttattattttttc 397  Q
    |||||||||||||| ||| | |||||    |||||| ||||||||||||  |||||||||||||  ||||| ||||||||||||| ||| || ||||||     
T  5168226 tacttcctccgtccctatatctaagcaccaatttgattttatttttgtctctaaatgtaaacccgttttcatattactagatgcattttttttttttttt 5168127  T
Q  398 ctaaacataccc 409  Q
    ||||||||||||    
T  5168126 ctaaacataccc 5168115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 21171940 - 21171857
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||||| ||||  |||||||||||    ||||||||||||| || ||||||||||||||| |||||||||||||||    
T  21171940 atttgattttatttatgtctctaaatgtaaacttcttttcaaattactatatacatttattatttttttctaaacataccccta 21171857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 26203349 - 26203263
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--ttttcctaaacataccccta 412  Q
    ||||||| |||| |||||||| ||||||||||| |  |||||||||| ||||| |||||||||||  ||||||||||||| ||||||    
T  26203349 catttgattttacttttgtccttaaatgtaaactccttttcaaattattagatacatttattattttttttcctaaacattccccta 26203263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 39414437 - 39414367
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||| ||||| |||||||  |||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  39414437 ttgtccctaaatataaaccccttttcaaattactagacacatttattatttttttcctaaacataccccta 39414367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 5933112 - 5933036
Alignment:
Q  320 taagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||| ||||||||||||||||||||||| ||||| ||||     ||||||||||||||||||| ||||| ||||||    
T  5933112 taagcattcatttgactttatttttgtccctaaatataaatttcttttcaaattactagatgcaattattttttttt 5933036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 48472383 - 48472467
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||  |||||||||||  | |||||||||| || |||| ||||||||||||| |  ||||||||||||    
T  48472383 catttgattttatttttgtctttaaatgtaaactttttttcaaattaataaatgcttttattatttttttcctaacataccccta 48472467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 3113583 - 3113524
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattt 386  Q
    |||||||||||||||||||||| ||||| |||||| | |||||||||| |||||| ||||    
T  3113583 tcatttgactttatttttgtccctaaatataaaccttctttcaaattattagatgtattt 3113524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 20116655 - 20116584
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttcctaaacataccccta 412  Q
    ||||||| | ||| |||||||  ||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  20116655 tttgtcccttaatataaaccccttttcaaattactagatgcatttatttatttttgtctaaacataccccta 20116584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 412
Target Start/End: Complemental strand, 32237045 - 32236964
Alignment:
Q  334 actttatttttgtccataaatgtaaaccctatttcaaattactaga--tgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||||||| ||||| |||| ||  ||| |||||||||||  ||||||||||| |||||| |||||||||||||||    
T  32237045 actttatttttgtccctaaatataaatccccttttaaattactagatgtgcatttattattttttttctaaacataccccta 32236964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 20792209 - 20792128
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacatacc 408  Q
    ||||||| ||||||||||  | |||||||||| |   ||| |||||||||||| ||||||||||| ||||||||||||||||    
T  20792209 catttgattttatttttgatcctaaatgtaaatctctttttaaattactagatacatttattatttttttcctaaacatacc 20792128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 21473763 - 21473723
Alignment:
Q  368 caaattactagatgcatttattattttttcctaaacatacc 408  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  21473763 caaattactagatacatttgttattttttcctaaacatacc 21473723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 50438209 - 50438269
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||| |||||||||||||  ||||||||||| | | ||||| ||||||||||    
T  50438209 tttatttttgtccctaaatgtaaaccccttttcaaattacaacacgcattaattatttttt 50438269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 3094553 - 3094486
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt 394  Q
    |||||||||||||||||||| | ||||||||||| |  ||| |||||| |||||  ||||||||||||    
T  3094553 tcatttgactttatttttgtgcttaaatgtaaactcctttttaaattagtagatatatttattatttt 3094486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 5448875 - 5448798
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    ||||| ||||||||||||| |||||||||||||  ||  |||||| |||||| ||||||| |||||||| ||||||||||    
T  5448875 tttgattttatttttgtccctaaatgtaaacccccttctaaattattagatgtatttatt-ttttttcc-aaacataccc 5448798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 412
Target Start/End: Original strand, 10541186 - 10541229
Alignment:
Q  369 aaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||    
T  10541186 aaattattagattcatttattattttttcctaaacatatcccta 10541229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 20291557 - 20291478
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacata 406  Q
    ||||| ||||||||||||||  ||||| |||| |   ||||||||||||| ||| |||||||| ||||||||||||||||    
T  20291557 catttaactttatttttgtctttaaatataaatctcttttcaaattactaaatgtatttattacttttttcctaaacata 20291478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 3684076 - 3684154
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    |||||||||||||||||||| ||||| ||||     ||| |||||| || |||||||||||||||||| ||||| ||||    
T  3684076 atttgactttatttttgtccttaaatataaatttatttttaaattattaaatgcatttattatttttttctaaatatac 3684154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 30050232 - 30050142
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt 389  Q
    |||||||||||| ||||| ||||||  |  |||||| ||||||||| | | ||||||||||  || ||| ||||||||||||| |||||||    
T  30050232 tacttcctccgttcttatatttaagtatctatttgattttatttttattcttaaatgtaaattcttttttaaattactagatgtatttatt 30050142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 395
Target Start/End: Original strand, 56216688 - 56216718
Alignment:
Q  365 tttcaaattactagatgcatttattattttt 395  Q
    |||||||||||||||||||||||||||||||    
T  56216688 tttcaaattactagatgcatttattattttt 56216718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 36513201 - 36513273
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccccta 412  Q
    ||||||| |||||||||||    |||||||||| | ||||||||||||||  ||||||||||||||| |||||    
T  36513201 tttgtccctaaatgtaaacatcttttcaaattattggatgcatttattattatttttcctaaacatatcccta 36513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 396
Target Start/End: Complemental strand, 54438757 - 54438661
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    |||| ||||||||  ||| | ||||| | ||||| | ||||||||||||| |||||||||| |   |||||||||| |||| ||||||||||||||||    
T  54438757 tactccctccgtctctatatctaagcatccattttattttatttttgtccctaaatgtaaatctcttttcaaattagtaga-gcatttattatttttt 54438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 30866836 - 30866789
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcatttatta 390  Q
    ||||||| ||||| ||||| | |||||||||||||||||||||||||||    
T  30866836 tttgtccctaaatataaactc-atttcaaattactagatgcatttatta 30866789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 41665955 - 41665843
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||||||||||||| ||| | ||||||  ||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||| ||||||||    
T  41665955 tacttcctccgtccctatatctaagctcccatttgactttatttttgtccctaaatgtaaactctctttcaaattactagatgcttttatt-ttttttcc 41665857  T
Q  399 taaacataccccta 412  Q
    ||||||||||||||    
T  41665856 taaacataccccta 41665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 16637569 - 16637497
Alignment:
Q  228 ataaaataaagacccgttttggcctctaacaaaaatattgagattcattttaatcactcataataaaaatgta 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16637569 ataaaataaagaccagttttggcctctaacaaaaatattgagattcattttaatccctcataataaaaatgta 16637497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 31644330 - 31644414
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31644330 catttgattttatttttgtccctaaatgtaaactcattttcaaattactagatgcatttattattttttcctaaacataccccta 31644414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 44424811 - 44424728
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44424811 catttgattttatttttgtccctaaatgtaaaccctttttcaaattactagatgcatttatt-ttttttcctaaacataccccta 44424728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 27749714 - 27749600
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttc 397  Q
    |||||||||||||||||| | |||||   ||||||| ||||||||||||| ||||||||||| |  ||||||||||| |||||||||||||| |||||||    
T  27749714 tacttcctccgtccttatatctaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattacaagatgcatttattacttttttc 27749615  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  27749614 ctaaacataccccta 27749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 8064931 - 8065044
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||| ||||||||| ||| |||||||   |||||||||||||| |||||| |||||||||||||  |||||||||||||||| ||||||||  |||||||    
T  8064931 tactccctccgtccctatatttaagcccccatttgactttattattgtccctaaatgtaaaccccctttcaaattactagatacatttattcatttttcc 8065030  T
Q  399 taaacataccccta 412  Q
    ||||||||||||||    
T  8065031 taaacataccccta 8065044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 407
Target Start/End: Original strand, 4398463 - 4398550
Alignment:
Q  320 taagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    ||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||||    
T  4398463 taagcattcatttgactttatttttgttcctaaatgtaaaccctttttcaaattactagatgcatttattttatttttctaaacatac 4398550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 14420923 - 14420809
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt-ttc 397  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||   ||||||||||||   ||||| ||||||||||||||||||||||||  ||    
T  14420923 tactccctccgtccttatatttaagcattcatttgactttatttttgtttctaaatgtaaacctcttttcagattactagatgcatttattattttaatc 14420824  T
Q  398 ctaaacataccccta 412  Q
    |||||||||| ||||    
T  14420823 ctaaacatactccta 14420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 17663871 - 17663757
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  17663871 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 17663772  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  17663771 ctaaacataccccta 17663757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 20362229 - 20362115
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  20362229 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 20362130  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  20362129 ctaaacataccccta 20362115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 326 - 412
Target Start/End: Original strand, 25731073 - 25731158
Alignment:
Q  326 ttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |  ||||||| |||||||||||||||||||||||    
T  25731073 ttcatttgactttatttttgtccttaaatgtaaaccct-tttcaaattactataaccatttataattttttcctaaacataccccta 25731158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 412
Target Start/End: Complemental strand, 41865955 - 41865848
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaaca 404  Q
    ||||||| ||| |||||||  |||||||| ||||||||||| | ||||||||||| |  |||||||||| ||||||||||||||||| ||||||||||||    
T  41865955 tccgtccctatatttaagcactcatttgattttatttttgttcctaaatgtaaacaccttttcaaattattagatgcatttattatttttttcctaaaca 41865856  T
Q  405 taccccta 412  Q
    ||||||||    
T  41865855 taccccta 41865848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 534712 - 534598
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttc 397  Q
    |||| ||||||||  ||| ||||||| | ||||||| ||||||||||||| ||||||||||||   ||||||||||||||||||||||| || |||||||    
T  534712 tactccctccgtctctatatttaagcatccatttgattttatttttgtccttaaatgtaaacctcttttcaaattactagatgcatttattttttttttc 534613  T
Q  398 ctaaacataccccta 412  Q
    ||||| |||||||||    
T  534612 ctaaatataccccta 534598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 28734041 - 28733956
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| ||||| ||||||   ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  28734041 catttgactttatttttgtccctaaatctaaacctcttttcaaattactatatgcatttattattgttttcctaaacataccccta 28733956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 15851750 - 15851664
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccccta 412  Q
    ||||||| ||||||||| ||| ||||||||||| |  |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15851750 catttgattttatttttctccctaaatgtaaactccttttcaaattactagatgcatttattattatttttcctaaacataccccta 15851664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 16637636 - 16637569
Alignment:
Q  6 atctattttagacgaggcctactttaaa-cgaggtgacattcattgattatttatacatggttttgga 72  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  16637636 atctattttagacgaggcctaatttaaaacgacgtgacattcattgattatttatacatggttttgga 16637569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 11071888 - 11071800
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttat---tattttttcctaaacataccccta 412  Q
    |||||||||||||||||||||| ||||| ||||| |  ||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  11071888 tcatttgactttatttttgtccctaaatctaaactccttttcaaattactagatgcatttattattattttttcctaaacatgccccta 11071800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 34330217 - 34330136
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatacccct 411  Q
    |||||| |||||||||||| |||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  34330217 atttgattttatttttgtctataaatgtaaactccttttcaaattactagatgcatttatt-ttttttcctaaacatatccct 34330136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 38449600 - 38449686
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||||||||||||||| | | |||||||||||||  |||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  38449600 tcatttgactttatttttattcctaaatgtaaaccccttttcaacttactagatgcatatattatttttttcctaaacataccccta 38449686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 27297794 - 27297710
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||| ||||||||||||| ||||||||||| |  |||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  27297794 atttgattttatttttgtccttaaatgtaaactccttttcaaattagtagatgcatttattatttttttcctaaacatatcccta 27297710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 37355255 - 37355172
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--ttttcctaaacataccc 409  Q
    ||||||| ||||||||||||  ||||| |||||||  ||||||||||||||||||||||||||||  |||||||||||||||||    
T  37355255 catttgattttatttttgtctctaaatataaaccccttttcaaattactagatgcatttattatttattttcctaaacataccc 37355172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 45214972 - 45214858
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| |||| |||||||| |||| ||  |||||||||||||||||  ||  |||||||| | || ||||||||||||||||| ||||||||||| |||||    
T  45214972 tactccctctgtccttatatttacgcactcatttgactttattttcttctctaaatgtatatcccatttcaaattactagatacatttattatttttttc 45214873  T
Q  398 ctaaacataccccta 412  Q
     ||||||||||||||    
T  45214872 ttaaacataccccta 45214858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 7278501 - 7278585
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||| ||||||||| ||  |||||||||| ||  |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  7278501 atttgattttatttttatctctaaatgtaaatcccttttcaaattactagatgcatttattattattttcttaaacataccccta 7278585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 28264839 - 28264926
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta--ttttttcctaaacataccccta 412  Q
    |||| ||| ||||||||||||| | ||||||||||   ||||||||||||||||||||||||||   |||||||||||||||||||||    
T  28264839 tcatctgattttatttttgtcctttaatgtaaacctcttttcaaattactagatgcatttattaatatttttcctaaacataccccta 28264926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 45150600 - 45150711
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--ttttt 396  Q
    |||| ||||||||| ||| ||||| |  |||||||| ||||||||||||| ||||||||||| |  ||||||||| |||||| ||||||||||  |||||    
T  45150600 tactccctccgtccctatatttaatcactcatttgattttatttttgtccctaaatgtaaactccttttcaaattgctagatacatttattattattttt 45150699  T
Q  397 cctaaacatacc 408  Q
    | ||||||||||    
T  45150700 cttaaacatacc 45150711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 2048707 - 2048802
Alignment:
Q  318 tttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||| | ||||||| |||||||||||   |||||||||| | | |||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  2048707 tttaagcatccatttgattttatttttgtttctaaatgtaaatcttttttcaaattattagatgcatttattatttttttcttaaacataccccta 2048802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 41327662 - 41327749
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattt 386  Q
    |||| ||||||||| ||| | |||||   |||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||    
T  41327662 tactccctccgtccatatatctaagcacccatttgactttatttttgtccataaatgtaaatctcttttcaaattactagatgcattt 41327749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 412
Target Start/End: Complemental strand, 7255813 - 7255734
Alignment:
Q  332 tgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||||| ||| ||||| ||||||||  |||||||||||||||| |||||||||| |||||||||||||| |||||    
T  7255813 tgactttatttttatccctaaatataaaccct--ttcaaattactagatgtatttattattattttcctaaacatatcccta 7255734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 9718059 - 9718141
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    ||||||| |||||||||||   ||||||||||| |  |||||||||| ||||||||||||||| |||||||||||||||||||    
T  9718059 catttgattttatttttgtttctaaatgtaaacaccctttcaaattattagatgcatttattatttttttcctaaacataccc 9718141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 24775106 - 24775000
Alignment:
Q  305 ctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaac 403  Q
    |||||||| ||| ||||||| | ||||||| ||||||||||||| ||||| |||| |   |||| |||||||||||  |||||||||| |||||||||||    
T  24775106 ctccgtccctatatttaagcatccatttgattttatttttgtccctaaatttaaatctcttttcgaattactagatatatttattatttttttcctaaac 24775007  T
Q  404 atacccc 410  Q
    |||||||    
T  24775006 atacccc 24775000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 412
Target Start/End: Original strand, 38981961 - 38982041
Alignment:
Q  331 ttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||| ||||||||||||| ||||| |||||||  ||| |||||| ||||||||||||||||||||| ||| |||||||||||    
T  38981961 ttgattttatttttgtccctaaatctaaacccatttttaaattattagatgcatttattatttttt-ctatacataccccta 38982041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 3326943 - 3326857
Alignment:
Q  330 tttgactttatttttgtccat-aaatgtaaaccctatttcaaattactagatgcatttattatt---ttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| ||||||||| |   ||||||||||||||||| ||||||||||   |||| |||||||||||||||    
T  3326943 tttgactttatttttgtccattaaatgtaaatctattttcaaattactagatgtatttattattatttttttctaaacataccccta 3326857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 404
Target Start/End: Complemental strand, 8667804 - 8667725
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaaca 404  Q
    ||||||||||||||||||| || ||||||||||| |  |||||||| |||||| |||||||||||  |||||||||||||    
T  8667804 tcatttgactttatttttgcccctaaatgtaaactcattttcaaataactagacgcatttattattatttttcctaaaca 8667725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 412
Target Start/End: Complemental strand, 13534644 - 13534538
Alignment:
Q  307 ccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt-attttttcctaaacat 405  Q
    |||||||||| | |||| || | ||||| ||||||||| ||  ||||| ||||  | ||||||||||||||||||| |||||| ||||||||||||||||    
T  13534644 ccgtccttatatctaagtttccgtttgattttatttttttctctaaatttaaattccatttcaaattactagatgcgtttattaattttttcctaaacat 13534545  T
Q  406 accccta 412  Q
    | |||||    
T  13534544 atcccta 13534538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 411
Target Start/End: Original strand, 37037474 - 37037544
Alignment:
Q  342 tttgtccataaatgtaaaccc-tatttcaaattactagatgcatttattattttttcctaaacatacccct 411  Q
    |||||| |||||| ||||||| | |||||||||||||||| |||||||||||||||| |||||||| ||||    
T  37037474 tttgtctataaatataaacccctttttcaaattactagatacatttattattttttcttaaacatatccct 37037544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 23464900 - 23464816
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||||||||||||| ||||||||||  || ||| |||||||||||||||||||||  ||||| ||| | |||||||||    
T  23464900 tcatttaactttatttttgtccctaaatgtaaa-tctcttttaaattactagatgcatttatttattttttctacaaataccccta 23464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 396
Target Start/End: Original strand, 40345962 - 40346031
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    |||||| | ||||||||||| | ||||||||||| |  |||||||||||||||| |||||||||||||||    
T  40345962 tcattttattttatttttgttcctaaatgtaaactccttttcaaattactagatacatttattatttttt 40346031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 2521224 - 2521272
Alignment:
Q  365 tttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2521224 tttcaaattgctagatgcatttattattattttcctaaacataccccta 2521272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 4034044 - 4033976
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||| |||||||| |||| ||||||||| |||  ||  ||||||||||||||||||||||||||||    
T  4034044 catttgattttattttagtccttaaatgtaatcccctttctaaattactagatgcatttattatttttt 4033976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 17250846 - 17250929
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta--ttttttcctaaacatacc 408  Q
    |||||| | ||||||||||||  ||||||||||| |  ||| ||||||||| ||||||||||||  ||||||||||||||||||    
T  17250846 tcatttaattttatttttgtctctaaatgtaaactcctttttaaattactatatgcatttattattttttttcctaaacatacc 17250929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 29971440 - 29971396
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  29971440 tttcaaattattagatgtatttattattttttcctaaacataccc 29971396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 36174720 - 36174764
Alignment:
Q  368 caaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  36174720 caaattactagatgaatttattattttttcttaaacataccccta 36174764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 38107685 - 38107637
Alignment:
Q  365 tttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  38107685 tttcaaattacaagatgcatttattattattttcctaaacataccccta 38107637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 412
Target Start/End: Original strand, 44274420 - 44274491
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt--cctaaacataccccta 412  Q
    |||||| |||||||||| ||  ||||||||||||| ||||||||||||||||||  | ||||||||||||||    
T  44274420 ttgtccctaaatgtaaatcccttttcaaattactaaatgcatttattatttttttccttaaacataccccta 44274491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 247907 - 247808
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||| ||||||||| ||| | |||||   |||||||||||| |||| ||  ||||||||||| |  |||||||||| |||||||| ||||||||||||||    
T  247907 tactccctccgtccctatatctaagcacccatttgactttagttttatctctaaatgtaaactccttttcaaattagtagatgcaattattattttttcc 247808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 12417532 - 12417619
Alignment:
Q  304 cctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat 391  Q
    ||||||||  ||| ||||| | || |||||||||||||||||||  ||||| |||||  | |||||||||| ||||||||||||||||    
T  12417532 cctccgtctctatatttaatcatttatttgactttatttttgtctttaaatataaacattttttcaaattattagatgcatttattat 12417619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 12429592 - 12429679
Alignment:
Q  304 cctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat 391  Q
    ||||||||  ||| ||||| | || |||||||||||||||||||  ||||| |||||  | |||||||||| ||||||||||||||||    
T  12429592 cctccgtctctatatttaatcatttatttgactttatttttgtctttaaatataaacattttttcaaattattagatgcatttattat 12429679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 35179033 - 35178986
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||||    
T  35179033 tttcaaattactaaacacatttattattttttcctaaacataccccta 35178986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 1246270 - 1246384
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||| ||||||| | ||| | | ||||| | |||||||||| || ||||| ||||||   ||||||||||||| || ||||||||||| ||||     
T  1246270 tactccctccatccttatatctaaacatccatttaattttatttttgcccttaaatataaaccacttttcaaattactaaatacatttattattattttt 1246369  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  1246370 ctaaacataccccta 1246384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 3237933 - 3237875
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattt 386  Q
    ||||||| ||||||||||||| ||||||||||| |  ||| ||||||||||||||||||    
T  3237933 catttgattttatttttgtccctaaatgtaaactcctttttaaattactagatgcattt 3237875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 44284848 - 44284914
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt 394  Q
    ||||||| ||||||||||| | ||||| ||||| || ||||||||| ||||||| ||||||||||||    
T  44284848 catttgattttatttttgtacctaaatataaactctttttcaaattcctagatgtatttattatttt 44284914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 406
Target Start/End: Complemental strand, 44421950 - 44421872
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttcctaaacata 406  Q
    |||||| ||||||||||||  |||||||||||||  ||  |||||| |||||||||||| || ||||||||||||||||    
T  44421950 atttgattttatttttgtctctaaatgtaaacccctttctaaattattagatgcatttattttttttttcctaaacata 44421872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 412
Target Start/End: Complemental strand, 2131968 - 2131890
Alignment:
Q  334 actttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||||||||||   |||||||||||||   |||||||||||||||| |||| || ||  ||| ||||||||||||||    
T  2131968 actttatttttgtgtctaaatgtaaacccctattcaaattactagatgtatttttttttccttcttaaacataccccta 2131890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 32677657 - 32677608
Alignment:
Q  365 tttcaaattactagatgcatttatta--ttttttcctaaacataccccta 412  Q
    |||||||||||||||| |||||||||  |||||| |||||||||||||||    
T  32677657 tttcaaattactagatacatttattatgtttttttctaaacataccccta 32677608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 8e-31; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 31746294 - 31746378
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  31746294 catttgactttatttttgtccctaaatgtaaaccccttttcaaattactagatacatttattattttttcctaaacataccccta 31746378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 25198505 - 25198422
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25198505 atttgactttatttttgtccctaaatgtaaactct-tttcaaattactagatgcatttattattattttcctaaacataccccta 25198422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 57075 - 57158
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    |||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  57075 tcatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattatttttttcctaaacataccc 57158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 24962224 - 24962338
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | || || | ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  24962224 tactccctccgtccctatatgtaggcatccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatgcatttattattattttc 24962323  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  24962324 ctaaacataccccta 24962338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 43980442 - 43980556
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  43980442 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatgcatttattattattttc 43980541  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  43980542 ctaaacataccccta 43980556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 45283346 - 45283459
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||| ||||||||||||| | ||||| || |||||||||||||||||||| ||||||||||  || |||||||||| ||||| | ||||||| |||||||    
T  45283346 tactccctccgtccttatatctaagcatttatttgactttatttttgtccttaaatgtaaattctttttcaaattattagatacgtttattaatttttcc 45283445  T
Q  399 taaacataccccta 412  Q
    |||||||| |||||    
T  45283446 taaacatatcccta 45283459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 39543548 - 39543627
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt--attttttcctaaacat 405  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||   |||||||||||||||    
T  39543548 catttgactttatttttgtccctaaatgtaaaccctttttcaaattactagatgcatttatttatttttttcctaaacat 39543627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 396
Target Start/End: Original strand, 38761225 - 38761312
Alignment:
Q  309 gtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    |||||||| | ||||| ||||||||| ||||||||||||| || ||||||||||  ||||||||||||||||||||||||||||||||    
T  38761225 gtccttatatctaagcattcatttgattttatttttgtccctatatgtaaaccccttttcaaattactagatgcatttattatttttt 38761312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 12763088 - 12762975
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||||||| | ||| | | ||||||| ||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||| |||||    
T  12763088 tactccctccgtccttatatctaaacatccatttgattttatttttgtccctaaatctaaaccct-ttccaaattactagatgcatttattatttttttc 12762990  T
Q  398 ctaaacataccccta 412  Q
    ||||| |||||||||    
T  12762989 ctaaagataccccta 12762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 31252514 - 31252628
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||| ||||||||| | ||||| | ||||||| ||||||||||| | ||||||||||||   |||||||||||||||||||||||||||| |||||    
T  31252514 tactcccttcgtccttatatctaagcatccatttgattttatttttgttcctaaatgtaaacctcttttcaaattactagatgcatttattattattttc 31252613  T
Q  398 ctaaacataccccta 412  Q
     ||||||||||||||    
T  31252614 ttaaacataccccta 31252628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 40517987 - 40517873
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | ||| | | ||||||||||||||||||||| ||||||||||| |  |||||||||| ||||| ||||||||||| |||||    
T  40517987 tactccctccgtccctatatctaaacatccatttgactttatttttgtccctaaatgtaaactccttttcaaattattagatccatttattatttttttc 40517888  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  40517887 ctaaacataccccta 40517873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 409
Target Start/End: Original strand, 1769329 - 1769418
Alignment:
Q  320 taagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    ||||| ||||||||| |||||||||||   ||||||||||||  ||||||||||| |||||||||||||||||||||| |||||||||||    
T  1769329 taagcattcatttgattttatttttgttactaaatgtaaacctcatttcaaattattagatgcatttattattttttcttaaacataccc 1769418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 7172435 - 7172359
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacat 405  Q
    |||||||||||||||| |||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  7172435 catttgactttattttagtccctaaatgtaacccct-tttcaaattactagatgcatttattattttttcataaacat 7172359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 37600779 - 37600860
Alignment:
Q  332 tgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  37600779 tgactttatttttgtccctaaatgtaaactctctttcaaattattagatgcatttattattttttttctaaacataccccta 37600860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 24512025 - 24512140
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--ttttt 396  Q
    |||| ||||||||| ||| | |||||  |||||||| ||||||||||||| |||||||||| ||| |||||||||  ||||||||||||||||  |||||    
T  24512025 tactccctccgtccatatatctaagcactcatttgattttatttttgtccctaaatgtaaatcctttttcaaattcttagatgcatttattattattttt 24512124  T
Q  397 cctaaacataccccta 412  Q
    | ||||||||||||||    
T  24512125 cttaaacataccccta 24512140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 40807899 - 40807979
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacatac 407  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||| |||||||||||||||    
T  40807899 catttgactttatttttgtccttaaatgtaaacctcatttcaaattactacatgcatttaatattattttcctaaacatac 40807979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 26878616 - 26878701
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| |||||||||||  | ||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  26878616 catttgattttatttttgtccctaaatgtaaacttttttttaaattactagatgtatttattatttttttcctaaacataccccta 26878701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 34158157 - 34158053
Alignment:
Q  305 ctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaac 403  Q
    |||||| | ||| |||||||  |||||||| ||||||||||||| ||||||||||  |  ||||||||||||| |||||||||||||| |||||||||||    
T  34158157 ctccgttcctatatttaagcactcatttgattttatttttgtccctaaatgtaaattcattttcaaattactatatgcatttattattattttcctaaac 34158058  T
Q  404 atacc 408  Q
    |||||    
T  34158057 atacc 34158053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 406
Target Start/End: Complemental strand, 37141943 - 37141864
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--ttttcctaaacata 406  Q
    |||||| ||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||    
T  37141943 atttgattttatttttgtccctaattgtaaaccctttttcacattactagatgcatttattattttttttcctaaacata 37141864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 40601928 - 40601992
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||    
T  40601928 catttgactttatttttgtccttaaatgtaaacctcttttcaaattactagatgcatttattatt 40601992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 407
Target Start/End: Complemental strand, 17933945 - 17933843
Alignment:
Q  304 cctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaac 403  Q
    ||||||||||||| | ||| |  |||||||| ||||||||||||| ||||| || | ||| |||||||||||||||| |||||||||| |||||||||||    
T  17933945 cctccgtccttatatctaaacactcatttgattttatttttgtccctaaatatacatcctttttcaaattactagatacatttattat-ttttcctaaac 17933847  T
Q  404 atac 407  Q
    ||||    
T  17933846 atac 17933843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 408
Target Start/End: Original strand, 38773202 - 38773317
Alignment:
Q  294 aaatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-tt 392  Q
    ||||||||| ||||||||  ||| | |||||  |||||||| ||||||||| ||| ||||| ||||||   |||||||||| ||||||||||||||| ||    
T  38773202 aaatgtactccctccgtcactatatctaagcactcatttgattttatttttatccctaaatttaaacctcttttcaaattattagatgcatttattattt 38773301  T
Q  393 ttttcctaaacatacc 408  Q
    ||||||||||||||||    
T  38773302 ttttcctaaacatacc 38773317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 412
Target Start/End: Original strand, 43191345 - 43191450
Alignment:
Q  304 cctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaac 403  Q
    ||||||||||||| | ||||| | ||||||| ||||||||||||  ||||||||||| |  ||||||||||||||||||||   || |||| ||||||||    
T  43191345 cctccgtccttatatgtaagcatccatttgattttatttttgtctctaaatgtaaactccttttcaaattactagatgcat---tttttttctcctaaac 43191441  T
Q  404 ataccccta 412  Q
    |||||||||    
T  43191442 ataccccta 43191450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 4273855 - 4273936
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    |||| ||||||||||||||| |||||||||||    |||||||||||||||||||||||||| |||||| ||||||||||||    
T  4273855 atttaactttatttttgtccttaaatgtaaacttcttttcaaattactagatgcatttattattttttttctaaacataccc 4273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 5191445 - 5191522
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||| | |||||||||||||  ||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  5191445 tttatttttgttcctaaatgtaaaccccttttcaaattactagatgcatttaatatttttttcttaaacataccccta 5191522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 396
Target Start/End: Complemental strand, 41087220 - 41087123
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    |||| ||||||||||||| | ||| || |||||||||||||||||| | | |||||||||||    ||||||||||||| ||||||||||||||||||    
T  41087220 tactccctccgtccttatatctaacctctcatttgactttatttttattcctaaatgtaaacatcctttcaaattactatatgcatttattatttttt 41087123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 45185153 - 45185237
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccc 409  Q
    |||||||||||||||||||||  ||||||||||| |  |||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  45185153 tcatttgactttatttttgtctctaaatgtaaactcattttcaaattactggatgcatttattattattttttctaaacataccc 45185237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 3006013 - 3006097
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt-ttcctaaacataccccta 412  Q
    |||||||||||||||||| | |||||||||| |   ||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  3006013 atttgactttatttttgttcctaaatgtaaatctcttttcaaattactagatgaatttattattttcttcctaaagataccccta 3006097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 7772729 - 7772645
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| |||| |||||||| ||||| |||||    ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  7772729 catttgattttacttttgtccctaaatataaacatcttttcaaattactagatgtatttattattttttcctaaacatatcccta 7772645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 25185280 - 25185163
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta----tttt 394  Q
    |||| |||| |||||||| | |||||  |||||| | | ||||||||||||||||||||||| |  |||||||||||||||||||||  |||    ||||    
T  25185280 tactccctctgtccttatatctaagcactcatttaattctatttttgtccataaatgtaaacaccttttcaaattactagatgcattatttatctttttt 25185181  T
Q  395 ttcctaaacataccccta 412  Q
    ||||||||||||||||||    
T  25185180 ttcctaaacataccccta 25185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 1177007 - 1177129
Alignment:
Q  292 aaaaatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta- 390  Q
    |||||| |||| ||||||||| ||| | ||| |  |||||| | |||| |||||||  ||||| |||||||  ||| ||||||||||||||||||||||     
T  1177007 aaaaatatactccctccgtccctatatgtaaacactcatttaattttacttttgtctctaaatataaacccctttttaaattactagatgcatttattat 1177106  T
Q  391 -ttttttcctaaacataccccta 412  Q
     ||||||||||||||||||||||    
T  1177107 tttttttcctaaacataccccta 1177129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 10396120 - 10396203
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttcctaaacataccccta 412  Q
    ||||| ||| ||||||||| | ||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10396120 tttgattttgtttttgtcccttaatataaaccccttttcaaattactagatgcatttatttattttttcctaaacatatcccta 10396203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 30262429 - 30262511
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| |||| |||||||||||||| |||| |||  |||||||||||||||||| |||||||||||| |||||||| ||||||    
T  30262429 atttgattttaattttgtccataaatataaatccttattcaaattactagatgca-ttattatttttttctaaacatgccccta 30262511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 40337078 - 40337161
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    |||||| | ||||||||| ||| ||||||||||||   ||||||||||||| |||||||||||| |||||||||||||||||||    
T  40337078 tcatttaattttatttttatccttaaatgtaaacctattttcaaattactatatgcatttattatttttttcctaaacataccc 40337161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 45183752 - 45183835
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||| ||||||||||||  ||||||||||| |  ||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  45183752 tttgattttatttttgtctctaaatgtaaactcctttttaaattactagatgcatttattattttttttctaaacataccccta 45183835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 406
Target Start/End: Original strand, 41371688 - 41371771
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta----ttttttcctaaacata 406  Q
    |||||||||||||||||||||| |||||||||||||| ||  ||||||  ||||||||||||||    ||||||||||||||||    
T  41371688 tcatttgactttatttttgtccctaaatgtaaaccctcttgtaaattatcagatgcatttattattatttttttcctaaacata 41371771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 10860937 - 10860860
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacat 405  Q
    |||| ||||||||||| ||| |||||||||| ||   |||||||||||||||||||||||||| ||||||||||||||    
T  10860937 atttaactttatttttatccctaaatgtaaatccatcttcaaattactagatgcatttattatatttttcctaaacat 10860860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 31673814 - 31673733
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccc 409  Q
    |||||| |||| |||| ||| | |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  31673814 atttgattttacttttatccttcaatgtaaaccctttttcaaattacaagatacatttattattcttttcctaaacataccc 31673733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 38202880 - 38202965
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||  || || |||||||  |||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  38202880 catttgattttatttttgtctctacatataaaccccttttcaaattactagatgcatttattatttttttcttaaatataccccta 38202965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 885711 - 885608
Alignment:
Q  295 aatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt 394  Q
    |||||||| ||||||| | ||| | |||||   ||||||| ||||||||||  | ||||| |||||||  ||||||||||||||||| ||||||||||||    
T  885711 aatgtactccctccgttcgtatatctaagcacccatttgattttatttttggtcctaaatttaaaccccttttcaaattactagatgaatttattatttt 885612  T
Q  395 ttcc 398  Q
    ||||    
T  885611 ttcc 885608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 36437683 - 36437634
Alignment:
Q  365 tttcaaattactagatgcatttattatttttt--cctaaacataccccta 412  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36437683 tttcaaattactagatgcatttattatttttttgcctaaacataccccta 36437634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 365 - 409
Target Start/End: Original strand, 14522269 - 14522314
Alignment:
Q  365 tttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  14522269 tttcaaattactagatgcatttattatttttttcctaaacataccc 14522314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 16357197 - 16357137
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||| |||||||||||||  ||||||||||| | ||||||| ||||||||||    
T  16357197 tttatttttgtccctaaatgtaaaccccttttcaaattacaacatgcattaattatttttt 16357137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 412
Target Start/End: Complemental strand, 45203935 - 45203891
Alignment:
Q  369 aaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  45203935 aaattactagatgcatttattattattttcctaaacataccccta 45203891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 398
Target Start/End: Complemental strand, 11444162 - 11444108
Alignment:
Q  344 tgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    ||||| ||||||||  |||  ||||||||||||||||||||||||||||||||||    
T  11444162 tgtccctaaatgtatgcccactttcaaattactagatgcatttattattttttcc 11444108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 2303340 - 2303247
Alignment:
Q  298 gtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat 391  Q
    ||||| ||||||||| ||| | |||||   ||||||| |||||||||||||  |||||||||| |  |||||||||||||||| | ||||||||    
T  2303340 gtactccctccgtccctatatctaagcaaccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagattcgtttattat 2303247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 2327934 - 2327841
Alignment:
Q  298 gtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat 391  Q
    ||||| ||||||||| ||| | |||||   ||||||| |||||||||||||  |||||||||| |  |||||||||||||||| | ||||||||    
T  2327934 gtactccctccgtccctatatctaagcaaccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagattcgtttattat 2327841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 37956331 - 37956274
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattt 386  Q
    |||||| ||||||||||||| |||||||||||||  ||| ||||||||| ||||||||    
T  37956331 atttgattttatttttgtccctaaatgtaaacccctttttaaattactaaatgcattt 37956274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 40791006 - 40790921
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| |||||||||   |  ||||||||||||||| | |||||||||| ||||| ||||||| ||||||    
T  40791006 catttgattttatttttgtccctaaatgtaatttccttttcaaattactagaggtatttattatttttttcttaaacatgccccta 40790921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 22590579 - 22590508
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc-taaacataccccta 412  Q
    ||||||| ||||| ||||||   |||||||||||||||| ||||||||||| ||||| | ||||||||||||    
T  22590579 tttgtccctaaatataaacctcttttcaaattactagatccatttattattatttccttgaacataccccta 22590508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 12998616 - 12998661
Alignment:
Q  368 caaattactagatgcatttattatttt-ttcctaaacataccccta 412  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||    
T  12998616 caaattactcgatgcattaattatttttttcctaaacataccccta 12998661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 23399675 - 23399746
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatacc 408  Q
    ||||||||||| | ||||||||||||   ||||||||||||| || | |||||| ||||||| ||||||||||    
T  23399675 tttatttttgttcctaaatgtaaacctagtttcaaattactaaatacttttatt-ttttttcttaaacatacc 23399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 8e-31; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 42891635 - 42891551
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  42891635 catttgactttatttttgtccctaaatgtaaacccctcttcaaattactagatgcatttattattttttcctaaacataccccta 42891551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 44083873 - 44083759
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt-c 397  Q
    |||| ||||||||| ||| | ||||| | ||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||||| |    
T  44083873 tactccctccgtccctatatctaagcatccatttgactttatttttgtccctaaatgtaaacccattttcaaattactagatccatttattattttttcc 44083774  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  44083773 ctaaacataccccta 44083759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 29676601 - 29676713
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||| ||||||||| ||| | |||||  |||||||| ||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||| ||    
T  29676601 tactccctccgtccctatatctaagcactcatttgattttatttttgtccctaaatgtaaacctcatttcaaattacta-atgcatttattatttttccc 29676699  T
Q  399 taaacataccccta 412  Q
    ||||||||||||||    
T  29676700 taaacataccccta 29676713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 50524865 - 50524950
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  50524865 catttgactttatttttgtccttaaatctaaaccctttttcaaattacaagatgcatttattatttttttcctaaacataccccta 50524950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 12077629 - 12077717
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta---ttttttcctaaacataccccta 412  Q
    |||||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  12077629 tcatttgattttatttttgtccttaaatgtaaaccccttttcaaattactagatgcatttattaattttttttcctaaacataccccta 12077717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 26517075 - 26517189
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt-c 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||| |    
T  26517075 tactccctccgtccatatatctaagcacccatttgattttatttttgtccctaaatgtaaactcttttacaaattactagatgcatttattattttttgc 26517174  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  26517175 ctaaacataccccta 26517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 20945189 - 20945274
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  20945189 catttgactttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttgttattattttcctaaacataacccta 20945274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 299 - 396
Target Start/End: Complemental strand, 29645570 - 29645473
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    |||| ||||||||||||| | ||||| || |||||| ||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||    
T  29645570 tactccctccgtccttatatctaagcatttatttgattttatttttgtccctaaatgtaaaccacttttcaaattactagatgcatttattatttttt 29645473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 26999260 - 26999176
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| |||||||||||||  ||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  26999260 catttgattttatttttgtcctcaaatgtaaacccctttttaaattattagatgcatttattattttttcctaaacataccccta 26999176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 412
Target Start/End: Complemental strand, 28477625 - 28477517
Alignment:
Q  304 cctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaac 403  Q
    ||||||||| ||| | ||||| | |||||||||||||||||| || ||||||||||||   |||||||||||||||||||||||||||||||||  |||     
T  28477625 cctccgtccctatatctaagcctccatttgactttatttttgcccctaaatgtaaacctcttttcaaattactagatgcatttattattttttctaaaat 28477526  T
Q  404 ataccccta 412  Q
    |||||||||    
T  28477525 ataccccta 28477517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 412
Target Start/End: Original strand, 14645755 - 14645863
Alignment:
Q  305 ctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaac 403  Q
    |||||||||||| | |||||   ||||||||||||||||||| | |||||||||||||  ||| ||||||||| |||||||||||| |||||| ||||||    
T  14645755 ctccgtccttatatctaagcacccatttgactttatttttgttcttaaatgtaaacccctttttaaattactatatgcatttattattttttttctaaac 14645854  T
Q  404 ataccccta 412  Q
    |||||||||    
T  14645855 ataccccta 14645863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 31530988 - 31531102
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--ttttt 396  Q
    |||| ||||||||| ||| | |||||   |||||||||||||||| |||| ||||||||||| |  |||||||||||||||||||||||||||  |||||    
T  31530988 tactccctccgtccctatatctaagcacccatttgactttatttt-gtccctaaatgtaaactccttttcaaattactagatgcatttattattattttt 31531086  T
Q  397 cctaaacataccccta 412  Q
    ||||||||||||||||    
T  31531087 cctaaacataccccta 31531102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 46048741 - 46048657
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacatacccc 410  Q
    |||||||| ||||||||||||| |||||||||||||  |||||||||| ||||||||||||||||| |||| |||||||||||||    
T  46048741 tcatttgattttatttttgtccctaaatgtaaaccccttttcaaattaatagatgcatttattattttttttctaaacatacccc 46048657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 11140912 - 11140829
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||||||| ||| | ||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11140912 atttgattttatttttatccctgaatgtaaacctcttttcaaattactagatgcatttattattttttcctaaacatgccccta 11140829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 11388326 - 11388255
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  11388326 tttgtccttaaatgtaaaccctttttcaaattactagatgcatttattattttttttctaaacataccccta 11388255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 43186961 - 43187072
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttc 397  Q
    |||||||||||||| ||| | ||| | | ||||||| |||| |||||||| ||||| |||||||  |||||| ||||||||||||||||||| |||||||    
T  43186961 tacttcctccgtccctatatgtaaacatccatttgattttacttttgtccttaaatataaaccccttttcaatttactagatgcatttattatttttttc 43187060  T
Q  398 ctaaacataccc 409  Q
    ||||||||||||    
T  43187061 ctaaacataccc 43187072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 405
Target Start/End: Original strand, 44698376 - 44698487
Alignment:
Q  294 aaatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattt 393  Q
    |||| |||| |||||| |||||| | ||| |  |||||||||||||||||||||| || ||||||||||  ||||||||||| |||| ||||||||||||    
T  44698376 aaatatactccctccgcccttatatctaatcactcatttgactttatttttgtccttagatgtaaacccattttcaaattacaagatacatttattattt 44698475  T
Q  394 tttcctaaacat 405  Q
    |||| |||||||    
T  44698476 tttcttaaacat 44698487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 306 - 412
Target Start/End: Complemental strand, 40645911 - 40645806
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacat 405  Q
    ||||||| ||| | ||||| ||| ||||||||||||||| ||| ||||| ||||||   |||||||||| |||||||||||||||| |||||||||||||    
T  40645911 tccgtccctatatctaagccttcgtttgactttatttttatccctaaatataaacctcctttcaaattattagatgcatttattat-ttttcctaaacat 40645813  T
Q  406 accccta 412  Q
    |||||||    
T  40645812 accccta 40645806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 41308666 - 41308750
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||||||||||||  ||||| |||| ||  |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41308666 catttgactttatttttgtctctaaat-taaatcccctttcaaattactagatgcatttattatttttttcctaaacataccccta 41308750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 31819622 - 31819538
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||| ||||||||||||| ||||| ||| ||   |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31819622 atttgattttatttttgtccctaaatataacccaattttcaaattactagatgcatttattatttttttcctaaacataccccta 31819538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 35145477 - 35145363
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--tttt 396  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||  ||||    
T  35145477 tactccctccgtccctatatataagcaaccatttgattttatttttgtccctaaatataaactct-tttcaaattactagatgcatttattatttttttt 35145379  T
Q  397 cctaaacataccccta 412  Q
    |||||||||| |||||    
T  35145378 cctaaacatatcccta 35145363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 31474639 - 31474556
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||||||||||||||||  ||||| ||||| |  ||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  31474639 atttgactttatttttgtctctaaatataaactcatttttaaattattagatgtatttattattttttcctaaacataccccta 31474556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 26043233 - 26043152
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccc 409  Q
    |||||||||||||||| |||| ||||||||||| |  ||||||||||||||| |||||||||||| |||||||||||||||||    
T  26043233 catttgactttatttt-gtccctaaatgtaaactccttttcaaattactagacgcatttattatttttttcctaaacataccc 26043152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 29349596 - 29349514
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacatacc 408  Q
    |||||||||||||||||||| | ||||||||||| |  ||||||||||||||||||||| |||| ||||||| ||||||||||    
T  29349596 tcatttgactttatttttgttcctaaatgtaaactcattttcaaattactagatgcattaattatttttttcttaaacatacc 29349514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 53716857 - 53716935
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacata 406  Q
    ||||| ||||||||||||||| |||||||||| ||  |||||| ||||||||||||||||||| ||||| |||||||||    
T  53716857 catttaactttatttttgtccttaaatgtaaatcccctttcaatttactagatgcatttattaattttttctaaacata 53716935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 21933128 - 21933058
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||| | ||| |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21933128 ttgtccctgaatataaacccattttcaaattactagatgcatttattatttttttcctaaacataccccta 21933058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 41727126 - 41727212
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||||| |||| |||||| | |||||||||||||  ||| ||||||||| |||||||||||| ||||||| ||||||||||||||    
T  41727126 tcatttgattttacttttgttcttaaatgtaaacccctttttaaattactaaatgcatttattatttttttcttaaacataccccta 41727212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 412
Target Start/End: Original strand, 13084252 - 13084332
Alignment:
Q  331 ttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||| ||||||||| ||| |||| |||||| |  |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  13084252 ttgattttatttttatccttaaacgtaaactccttttcaaattactagatgcatttatta-tttttcctaaacatatcccta 13084332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 396
Target Start/End: Original strand, 39617116 - 39617209
Alignment:
Q  303 tcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||| |||| | ||||| ||||||| | ||||||||||||  |||||||||||| | ||| |||| | |||||||||||||||||||||    
T  39617116 tcctccgtctttatatctaagcattcatttcattttatttttgtcactaaatgtaaacctttttttaaatgattagatgcatttattatttttt 39617209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 11345566 - 11345449
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta----ttatttt 394  Q
    |||| ||||||||| ||| | |||||   ||||||| |||||||||| || ||||| |||||||  ||||||||||||||||| |||||    || ||||    
T  11345566 tactccctccgtccctatatctaagcacccatttgattttatttttgcccctaaatttaaaccccttttcaaattactagatgtatttataatttttttt 11345467  T
Q  395 ttcctaaacataccccta 412  Q
    ||||||||||||||||||    
T  11345466 ttcctaaacataccccta 11345449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 50363241 - 50363159
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| |||| |||||||| ||| |||||| ||| ||||||||||||| || |||||||||| ||||||||||||||||||||    
T  50363241 catttgattttagttttgtccctaa-tgtaaaacctttttcaaattactaaatacatttattat-ttttcctaaacataccccta 50363159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 831248 - 831334
Alignment:
Q  329 atttgactttattttt--gtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||||||||  |||| ||||||||||| |  ||| ||| |||||||||||||||||||| ||||||||||||||| ||||    
T  831248 atttgactttatttttttgtccttaaatgtaaactcctttttaaactactagatgcatttattattattttcctaaacatactccta 831334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 25750733 - 25750666
Alignment:
Q  331 ttgactttattttt-gtccataaatgtaaaccctatttcaaattactagatgcatttattattttttc 397  Q
    |||||||||||||| |||| ||||||||||| || |||||||||||||||| |||||||||| |||||    
T  25750733 ttgactttattttttgtccttaaatgtaaactctttttcaaattactagatacatttattatattttc 25750666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 5504491 - 5504549
Alignment:
Q  355 gtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  5504491 gtaaacccttttttaaattactatatgcatttattatttttttcctaaacataccccta 5504549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 30476219 - 30476173
Alignment:
Q  367 tcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  30476219 tcaaattactagatgcatttattatttttttcctaaacataccccta 30476173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 44338275 - 44338213
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||||||||||  ||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  44338275 taaatgtaaaccccttttcaaattcctagatgcatttatattattttcctaaacataccccta 44338213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 406
Target Start/End: Complemental strand, 22659798 - 22659718
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacata 406  Q
    |||||||||||||||||||||   ||||||||| |   ||| |||||||||||||||||||||||| ||||| ||||||||    
T  22659798 tcatttgactttatttttgtctccaaatgtaaatctctttttaaattactagatgcatttattattattttcataaacata 22659718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 34055755 - 34055835
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||| ||||||||| ||  |||||||| ||||  ||| ||||||||||||  |||||||||||||| ||||||||||||    
T  34055755 atttgattttatttttttctctaaatgtatacccctttttaaattactagatatatttattatttttttctaaacataccc 34055835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 35055965 - 35055921
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  35055965 tttcaaattattagatgcatttattattttatcctaaacataccc 35055921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 11396918 - 11396855
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||| |  |||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  11396918 taaatgtaaactccttttcaaattattagatgcatttattatttttttcctaaacatacaccta 11396855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 12236524 - 12236446
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt-cctaaacatacccc 410  Q
    ||||||||||||||||||||| |    ||||| ||  ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  12236524 catttgactttatttttgtccct----gtaaatccattttcaaattacta-atgcatttattatttttttcctaaacatacccc 12236446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 407
Target Start/End: Complemental strand, 33288045 - 33288003
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  33288045 tttcaaattactagatacatttactattttttcctaaacatac 33288003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 48309645 - 48309576
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||| ||||||   ||||||||||||||||  |||||||  |||||||||||||||||||||    
T  48309645 ttgtccctaaatttaaaccaattttcaaattactagatatatttatttatttttcctaaacataccccta 48309576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 50092878 - 50092822
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||||||||||||||||| |||| |   |||||||||| |||||||||||||||||    
T  50092878 tttatttttgtccataaatataaatctattttcaaattaatagatgcatttattatt 50092822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 3475667 - 3475582
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttc---ctaaacataccc 409  Q
    ||||||| ||||||||||||| ||||| ||||||   ||| || |||||||||||||||| ||||||||||   ||||||||||||    
T  3475667 catttgattttatttttgtccctaaatataaacctctttttaacttactagatgcatttatttattttttctttctaaacataccc 3475582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 408
Target Start/End: Original strand, 6719305 - 6719348
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacatacc 408  Q
    |||||||||||||||||||||||||  |||||||| ||||||||    
T  6719305 tttcaaattactagatgcatttatttatttttccttaacatacc 6719348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 409
Target Start/End: Original strand, 41739877 - 41739944
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    |||||| ||||| ||||| |  |||||||||||||| | ||||||||| |||||||||||||||||||    
T  41739877 ttgtccctaaatataaactcattttcaaattactaggtacatttattatttttttcctaaacataccc 41739944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 33411865 - 33411939
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaa 402  Q
    ||||||| ||||||||| | | ||||||||||  |  |||||||||| ||||| |||||||||||||| ||||||    
T  33411865 catttgattttatttttattcttaaatgtaaattcattttcaaattattagatacatttattatttttccctaaa 33411939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 9178550 - 9178462
Alignment:
Q  296 atgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt 389  Q
    |||||||| |||||| | ||| | |||||  ||||||||||||||||     ||||| |||||||||  ||| |||||||||||||||||||||    
T  9178550 atgtactttctccgttcatatttctaagcactcatttgactttattt-----cataactgtaaacccctttttaaattactagatgcatttatt 9178462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 4979535 - 4979591
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacata 406  Q
    ||||||||||||   ||||||||||||| || |||||||||| ||||||| ||||||    
T  4979535 taaatgtaaacctcttttcaaattactaaatacatttattatcttttccttaacata 4979591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 396
Target Start/End: Original strand, 27047105 - 27047137
Alignment:
Q  364 atttcaaattactagatgcatttattatttttt 396  Q
    |||||||||||||||||| ||||||||||||||    
T  27047105 atttcaaattactagatgaatttattatttttt 27047137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 39932106 - 39932042
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacatacccctat 413  Q
    ||||| |||||||  ||||||| ||||| || ||||||||||| ||||||||||||||| |||||    
T  39932106 taaatataaacccattttcaaaatactaaatacatttattattgttttcctaaacatactcctat 39932042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 395
Target Start/End: Original strand, 46435643 - 46435687
Alignment:
Q  351 aaatgtaaaccctatttcaaattactagatgcatttattattttt 395  Q
    ||||||||||| | ||||||||||| ||||||||||||| |||||    
T  46435643 aaatgtaaaccttttttcaaattacaagatgcatttatttttttt 46435687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 409
Target Start/End: Original strand, 52325431 - 52325474
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||    
T  52325431 tttcaaattattagatgcatttatta-tttttcctaatcataccc 52325474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 10685331 - 10685221
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||| ||||||||||||| | |||||  |||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||| |    
T  10685331 tactccctccgtccttatatctaagcactcatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattatttttttc 10685232  T
Q  399 taaacataccc 409  Q
    ||||| |||||    
T  10685231 taaacgtaccc 10685221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 4089388 - 4089472
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4089388 catttgattttatttttgtccctaaatgtaaactctttttaaaattactagatgcatttattattttttcctaaacataccccta 4089472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 18121902 - 18122009
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||| ||||||||| ||| | |||||   ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  18121902 tactccctccgtccctatatgtaagcacgcatttgactttatttttgtccctaaatgtaaacccttttt-aaattactagatgcatttattattttttcc 18122000  T
Q  399 taaacatac 407  Q
    |||||||||    
T  18122001 taaacatac 18122009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 48767812 - 48767698
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  48767812 tactccctccgtccctatatctaagcccccatttgattttatttttgtccctaaatgtaaaccccctttcaaattactagatgcatttatttattttttc 48767713  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  48767712 ctaaacataccccta 48767698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 19235923 - 19236039
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttatt--ttt 395  Q
    |||||||||||||| ||| | |||||  |||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||| |||||  |||    
T  19235923 tacttcctccgtccctatatctaagcactcatttgactttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttatttatttattt 19236022  T
Q  396 tcctaaacataccccta 412  Q
    |||||||||||||||||    
T  19236023 tcctaaacataccccta 19236039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 1324917 - 1324841
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1324917 tttatttttgtccctaaatgtaaaccccctttcaaattactagatgaatttattattttttcctaaacataccccta 1324841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 21759967 - 21759856
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttc 397  Q
    |||| ||||||||| ||| | ||||  | ||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  21759967 tactccctccgtccctatatgtaagaatccatttgattttatgtttgtccctaaatgtaaactctatttcaaattactagatgcatttattacttttttc 21759868  T
Q  398 ctaaacataccc 409  Q
    ||||||||||||    
T  21759867 ctaaacataccc 21759856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 35128632 - 35128517
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--tttt 396  Q
    |||| ||||| | ||||| |||||||  |||||||| ||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||  ||||    
T  35128632 tactccctccattcttatatttaagcactcatttgattttatttttgtccctaaatgtaaacctcttttcaaattactagatgcatttattatttttttt 35128533  T
Q  397 cctaaacataccccta 412  Q
    | ||||||||||||||    
T  35128532 cttaaacataccccta 35128517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 408
Target Start/End: Complemental strand, 21388490 - 21388379
Alignment:
Q  298 gtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-tttt 396  Q
    ||||||| ||||||| ||| |||||||   ||||||| ||||||||||||  |||||||||||||  || ||||||||||||||||||||||||| ||||    
T  21388490 gtacttcgtccgtccctatatttaagcacccatttgattttatttttgtctctaaatgtaaacccctttccaaattactagatgcatttattattttttt 21388391  T
Q  397 cctaaacatacc 408  Q
    ||||||||||||    
T  21388390 cctaaacatacc 21388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 33181512 - 33181428
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt-attttttcctaaacataccccta 412  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||| |||||||| ||||||||| ||||    
T  33181512 tcatttgactttatttttgtccataaatgtaaaccc--tttcaaattattagatgcatttattaattttttcttaaacatactccta 33181428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 5333786 - 5333872
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttat--tattttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| |||||||||||||  ||| ||||||||||||| ||||||  | ||||||||||||||||||||||    
T  5333786 catttgactttatttttgtccctaaatgtaaacccctttttaaattactagatgtatttataattttttttcctaaacataccccta 5333872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 48610026 - 48610108
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  48610026 atttgattttatttttgtctttaaatgtaaatcct-tttcaaattactagatgcatttattatttttttctaaacatatcccta 48610108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 8318775 - 8318689
Alignment:
Q  302 ttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttat 388  Q
    ||||||||||||||  | ||||| | |||||||| |||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  8318775 ttcctccgtccttaaatctaagcatccatttgacgttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttat 8318689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 43601017 - 43601107
Alignment:
Q  290 ataaaaatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagat 380  Q
    ||||||| ||| |||||| |||| ||| |||||||  |||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  43601017 ataaaaaagtatttcctcggtccctatatttaagcactcatttgactttatttttgtccataaatgtaaaccacttttcaaattactagat 43601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 36726059 - 36726146
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta---ttttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||||||   ||||||||||||| ||||||||    
T  36726059 catttgattttatttttgtctctaaatgtaaacccactttcaaattactagatgcatttattatttttttttcctaaacttaccccta 36726146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 26633089 - 26632979
Alignment:
Q  303 tcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaa 401  Q
    |||||||||| ||| | |||||   ||||||| ||||||||||||| |||||||| ||    ||||||||||||||||||||||||||||  ||||||||    
T  26633089 tcctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtagacttcttttcaaattactagatgcatttattattactttcctaa 26632990  T
Q  402 acataccccta 412  Q
    |||||||||||    
T  26632989 acataccccta 26632979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 29635932 - 29636005
Alignment:
Q  332 tgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaaca 404  Q
    ||||||||||||||||| |||||||||| ||  |||||||||| ||||||||||||||| ||||||||||||||    
T  29635932 tgactttatttttgtccctaaatgtaaatccattttcaaattattagatgcatttattatttttttcctaaaca 29636005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 34118227 - 34118146
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccc 409  Q
    |||||||||||||||||||  |||||||||||  | ||| ||||||||||||||| |||||||| |||||||||||||||||    
T  34118227 atttgactttatttttgtctctaaatgtaaacttttttttaaattactagatgcagttattatttttttcctaaacataccc 34118146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 396
Target Start/End: Original strand, 43465004 - 43465101
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    |||| |||| |||| ||| | ||||||  ||||||||||||||||||||  |||||||| || || ||||||||||||| ||||||||||||||||||    
T  43465004 tactccctctgtccctatatctaagctcccatttgactttatttttgtctttaaatgtacactctctttcaaattactaaatgcatttattatttttt 43465101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 37491478 - 37491591
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttc 397  Q
    |||| ||||||||| ||| | ||||| |  |||||||||||||||| ||| ||||||||||| || ||| ||||||  |||| |||||||||| ||||||    
T  37491478 tactccctccgtccatatatctaagcatctatttgactttatttttatccttaaatgtaaactct-ttttaaattaacagatacatttattatgtttttc 37491576  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  37491577 ctaaacataccccta 37491591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 40741147 - 40741085
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||| |||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  40741147 taaatataaaccccttttaaaattactagacgcatttattattttttcctaaacataccccta 40741085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 31365712 - 31365794
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttc-ctaaacataccccta 412  Q
    |||||| ||||||||||||  ||||||||||| || |||||||||| ||||||||||||  |||||||| |||||||||||||||    
T  31365712 atttgattttatttttgtctgtaaatgtaaactctttttcaaattattagatgcattta--attttttctctaaacataccccta 31365794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 412
Target Start/End: Complemental strand, 28663931 - 28663888
Alignment:
Q  369 aaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  28663931 aaattactagatgcatttatgattttttcctaaacataccccta 28663888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 41672433 - 41672506
Alignment:
Q  341 ttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta--ttttttcctaaacataccccta 412  Q
    |||||||| ||||| ||| ||||  | |||||||||||||||||||||||  ||||||||||||||||||||||    
T  41672433 ttttgtccctaaatataagcccttatacaaattactagatgcatttattattttttttcctaaacataccccta 41672506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 47458082 - 47458156
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt-cctaaacataccc 409  Q
    ||||||||||||| ||||||||||  |  ||| ||||||||| |||||||||||||||||| |||||||||||||    
T  47458082 tttatttttgtccctaaatgtaaattcctttttaaattactaaatgcatttattattttttccctaaacataccc 47458156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 29723680 - 29723599
Alignment:
Q  326 ttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    ||||||| | ||||||||||||  ||||| |||| ||  ||| ||||||||||||||||||||||||||||| |||| ||||    
T  29723680 ttcatttaattttatttttgtctttaaatataaatccatttttaaattactagatgcatttattattttttcttaaatatac 29723599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 405
Target Start/End: Original strand, 46783735 - 46783807
Alignment:
Q  334 actttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacat 405  Q
    ||||| ||||||||| ||||||||||| | ||||||| ||||||||| |||||||||| ||||| ||||||||    
T  46783735 actttgtttttgtccctaaatgtaaactccatttcaacttactagatacatttattatgttttttctaaacat 46783807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 409
Target Start/End: Original strand, 2276436 - 2276546
Alignment:
Q  298 gtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttc 397  Q
    ||||| ||||||||| ||| | |||||   ||||||| ||||||||||||| |||||||||| |   |||||||||||||||  ||||| || ||| |||    
T  2276436 gtactccctccgtccctatatataagcacccatttgattttatttttgtccctaaatgtaaatcgcttttcaaattactagacacattt-ttttttcttc 2276534  T
Q  398 ctaaacataccc 409  Q
    ||||||||||||    
T  2276535 ctaaacataccc 2276546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 37673953 - 37673870
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||| ||||||||||||  ||||||||||| |  ||| ||||||||||||| |||||||||| ||||| ||||||| ||||||    
T  37673953 tttgattttatttttgtctctaaatgtaaactcctttttaaattactagatgtatttattatttttttcttaaacatgccccta 37673870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 20123663 - 20123606
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattt 386  Q
    ||||||| ||||||||||||| |||||||||||||  ||||||||||| ||||||||||    
T  20123663 catttgattttatttttgtccctaaatgtaaaccc-ctttcaaattacaagatgcattt 20123606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 25098281 - 25098343
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    ||||||||||||| |||||||||| ||| ||||||||||| | | ||||| ||||||||||||    
T  25098281 tttatttttgtccttaaatgtaaatcctttttcaaattacaacacgcattaattattttttcc 25098343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 35960553 - 35960512
Alignment:
Q  371 attactagatgcatttattattttttcctaaacataccccta 412  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  35960553 attagtagatgcatttattattttttcataaacataccccta 35960512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 40211079 - 40211142
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttatta--ttttttcctaaacataccccta 412  Q
    ||||||||| |||| ||||||||||||||||| ||||||||  |||||||||||||||| |||||    
T  40211079 taaatgtaacccct-tttcaaattactagatgtatttattattttttttcctaaacatatcccta 40211142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 20124422 - 20124362
Alignment:
Q  296 atgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgt 356  Q
    ||||||| ||||||||| ||| |||||||  |||||||| ||||||||||||| |||||||    
T  20124422 atgtactccctccgtccctatatttaagcactcatttgattttatttttgtccctaaatgt 20124362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 37048248 - 37048170
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    ||||||||||||||||||| |||||||| |||    |||||||||||||||||||||| || ||| || ||||||||||||    
T  37048248 atttgactttatttttgtc-ataaatgttaacttcttttcaaattactagatgcattt-ttttttctttctaaacataccc 37048170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 37136385 - 37136314
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccccta 412  Q
    |||||| ||||| ||||||   ||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  37136385 ttgtccctaaatataaacctcttttcaaattactagacgcattcattattatttttcctaaacataccccta 37136314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 49100893 - 49100804
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaa-ccctatttcaaattactagatgcatttatt----attttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||| |||||| |||  ||| ||||||||| |||||||||||     ||||||||||||||||||||||    
T  49100893 catttgattttatttttgtccctaattgtaaaccccctttttaaattactatatgcatttatttttatttttttcctaaacataccccta 49100804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 407
Target Start/End: Original strand, 27162827 - 27162870
Alignment:
Q  365 tttcaaattactagatgcatttatta-ttttttcctaaacatac 407  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  27162827 tttcaaattactaaatgcatttattatttttttcctaaacatac 27162870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 408
Target Start/End: Complemental strand, 29993188 - 29993153
Alignment:
Q  373 tactagatgcatttattattttttcctaaacatacc 408  Q
    |||||||||||||||||||| |||||||||||||||    
T  29993188 tactagatgcatttattattatttcctaaacatacc 29993153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 27213667 - 27213638
Alignment:
Q  367 tcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||||||||||||||||||||    
T  27213667 tcaaattactagatgcatttattatttttt 27213638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 6376020 - 6376104
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||| ||||||||||||| ||| | ||||   | ||| |||||| |||||| |||||||| ||||||||||||||||| ||||    
T  6376020 atttgattttatttttgtccctaactctaaatttttttttaaattattagatgtatttattatttttttcctaaacatactccta 6376104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 412
Target Start/End: Original strand, 21809575 - 21809619
Alignment:
Q  369 aaattactagatgcatttattat-tttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||    
T  21809575 aaattactagatgcatttattttatttttcttaaacataccccta 21809619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 408
Target Start/End: Complemental strand, 23876214 - 23876174
Alignment:
Q  369 aaattactagatgcatttattatt-ttttcctaaacatacc 408  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  23876214 aaattattagatgcatttattattattttcctaaacatacc 23876174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 42983502 - 42983582
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacatacc 408  Q
    |||||| ||||||||||||  ||||| ||||| |  |||||||||  |||||  |||||||||| ||||||||||||||||    
T  42983502 atttgattttatttttgtctttaaatataaactcattttcaaattgttagatctatttattattattttcctaaacatacc 42983582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 30249079 - 30248995
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| ||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||    
T  30249079 catttgactttatttttgtccctaaatgtaaacctattttcaaattactagatccatttattattttttcctaaacataccccta 30248995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 19839178 - 19839064
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  19839178 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 19839079  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  19839078 ctaaacataccccta 19839064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 28238216 - 28238286
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28238216 tttgtccttaaatgtaaatcctttttcaaattactagatgcatttattattttttcctaaacataccccta 28238286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 409
Target Start/End: Complemental strand, 9461533 - 9461429
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaaca 404  Q
    ||||||| ||| |||||||||  |||  ||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||    
T  9461533 tccgtccatatatttaagcttctattcaactttatttttgtccttaaatgtaaaccctctttcaaattattagatgcatttattattttttttctaaaca 9461434  T
Q  405 taccc 409  Q
    |||||    
T  9461433 taccc 9461429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 412
Target Start/End: Original strand, 31945767 - 31945885
Alignment:
Q  295 aatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttt 393  Q
    |||||||| ||||||||||||| | ||| |  |||||||| ||||||||||||  |||||||||||    |||||||||||||||||||||||||| |||    
T  31945767 aatgtactccctccgtccttatatgtaaccactcatttgattttatttttgtctctaaatgtaaacttcttttcaaattactagatgcatttattatttt 31945866  T
Q  394 tttcctaaacataccccta 412  Q
    ||||||||||||| |||||    
T  31945867 tttcctaaacatatcccta 31945885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 34513115 - 34513191
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||| | ||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  34513115 tttatttttgttcctaaatgtaaactccttttcaaattactagatgcatttattatttttttctaaacataccccta 34513191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 16186788 - 16186707
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta--ttattttttcctaaacatac 407  Q
    ||||||| |||| |||||||| ||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  16186788 catttgattttacttttgtccttaaatataaaccctttttcaaattactagatgcatttattttattttttcctaaacatac 16186707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 6791594 - 6791509
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||  |||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  6791594 catttgattttatttttgtctttaaatgtaaaccccttttcaacttactagatgcatttattatttttttcctaaacatactccta 6791509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 15982012 - 15981931
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacatacc 408  Q
    ||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||| ||||| | |||||||||    
T  15982012 catttaactttatttttgtccctaaatgtaaaccttttttcaaattactagatgcatttattatattttttcaaaacatacc 15981931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 30465857 - 30465934
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacat 405  Q
    |||||||||||||||||| |||||||||||||    |||||||||||||||||||||||||| |||||||||||||||    
T  30465857 atttgactttatttttgttcataaatgtaaacttcttttcaaattactagatgcatttattatttttttcctaaacat 30465934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 16327336 - 16327261
Alignment:
Q  334 actttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacatacc 408  Q
    ||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  16327336 actttatttttgtctctaaatataaaccccttttcaaattactagatgcatttattatatttttcctaaacatacc 16327261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 16350734 - 16350659
Alignment:
Q  334 actttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacatacc 408  Q
    ||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  16350734 actttatttttgtctctaaatataaaccccttttcaaattactagatgcatttattatatttttcctaaacatacc 16350659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 33607556 - 33607488
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33607556 ttgtccctaaatataaacactttttcaaattactagatgcatttatt-ttttttcctaaacataccccta 33607488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 1764060 - 1763949
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||  |||||||| ||||||||||||  ||||| ||||| |  || ||||||| ||||||||||||||||| |||||    
T  1764060 tactccctccgtccctatatctaagcactcatttgattttatttttgtctctaaatataaacacctttccaaattattagatgcatttattattattttc 1763961  T
Q  398 ctaaacataccc 409  Q
    ||||||||||||    
T  1763960 ctaaacataccc 1763949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 22410730 - 22410812
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||||| |  |||||||||||||| ||||||||||| |||||||    
T  22410730 catttgattttatttttgtccctaaatgtaaatcctttttcaaataataagatgcatttattatttttttcctaagcataccc 22410812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 31486964 - 31487035
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcatttattattt-tttcctaaacataccccta 412  Q
    ||||||| |||||||||| ||| ||| |||||||||||| |||||||||||| |||||||||||||| ||||    
T  31486964 tttgtccttaaatgtaaatccttttttaaattactagatacatttattatttctttcctaaacatactccta 31487035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 197336 - 197402
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattt 393  Q
    |||||||||||||||||||||| |||||||||||    ||| |||||||||||||| ||||||||||    
T  197336 tcatttgactttatttttgtccttaaatgtaaacttctttttaaattactagatgcctttattattt 197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 3887867 - 3887915
Alignment:
Q  365 tttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3887867 tttcaaattattagatgcatttattatttttttcctaaacataccccta 3887915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 31536231 - 31536163
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||| ||||| ||||||  | |||||||||||  |||||||||||||| |||||||||||||||||    
T  31536231 catttgattttatatttgtcactgaatgtaaaccccttttcaaattactagttgcatttattatttttt 31536163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 11082579 - 11082518
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||  || |||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  11082579 taaatgtaaattctttttcaaat-actagatgcatttattattctttcctaaaaataccccta 11082518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 5895921 - 5895864
Alignment:
Q  356 taaaccctatttcaaattactagatgcatttatt-attttttcctaaacataccccta 412  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||| || ||||||    
T  5895921 taaaccccttttcaaattactagatgcatttattaattttttcctaaatatgccccta 5895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 10260491 - 10260578
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatt---tattattttttcctaaacataccccta 412  Q
    ||||||| |||||||||||   ||||||||||   | |||||||||||||||||||||   |||| ||||||||||| ||||||||||    
T  10260491 catttgattttatttttgtttttaaatgtaaattttttttcaaattactagatgcatttactatttttttttcctaagcataccccta 10260578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 11303075 - 11302988
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgc-atttatta--ttttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| |||||||||||    |||||||| |||||||||  |||||||  ||||||| ||||||||||||||    
T  11303075 catttgattttatttttgtccttaaatgtaaacttcttttcaaataactagatgctttttattattttttttcttaaacataccccta 11302988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 412
Target Start/End: Complemental strand, 3729598 - 3729555
Alignment:
Q  369 aaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||    
T  3729598 aaattattagatgcatttattatttttttctaaacatactccta 3729555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 395
Target Start/End: Original strand, 12514504 - 12514534
Alignment:
Q  365 tttcaaattactagatgcatttattattttt 395  Q
    |||||||||||||||||||||||||||||||    
T  12514504 tttcaaattactagatgcatttattattttt 12514534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 27442598 - 27442538
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    ||||||||||||| |||||||||||||| ||||||||||| | | ||||| ||||||||||||    
T  27442598 tttatttttgtcc-taaatgtaaaccct-tttcaaattacaacacgcattaattattttttcc 27442538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 5457400 - 5457324
Alignment:
Q  331 ttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatacc 408  Q
    |||||||||||||| ||  ||||| |||| ||  |||||||||| |||||||||||||| ||||  ||||||||||||    
T  5457400 ttgactttatttttatctctaaatataaatccattttcaaattattagatgcatttatt-ttttcccctaaacatacc 5457324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 12802825 - 12802871
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacatacccctat 413  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||    
T  12802825 tttcaaattactagatgcgtttat--ttttttcataaacatacccctat 12802871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 12503533 - 12503583
Alignment:
Q  365 tttcaaattactagatgcatttattatttttt---cctaaacataccccta 412  Q
    |||||||||||| |||||||| ||||||||||   ||||||||||||||||    
T  12503533 tttcaaattactggatgcattaattatttttttaccctaaacataccccta 12503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 31062503 - 31062460
Alignment:
Q  368 caaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||    
T  31062503 caaattactagatgcatttattat-ttttcttgaacataccccta 31062460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 31780322 - 31780259
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacatacccct 411  Q
    ||||| ||||| | |||||||||||||||||  |||||||||  || |||||||||||||||||    
T  31780322 taaatataaactccatttcaaattactagatagatttattattattattcctaaacatacccct 31780259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 298 - 412
Target Start/End: Original strand, 5084945 - 5085060
Alignment:
Q  298 gtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-tttttt 396  Q
    ||||| ||||||||| ||| | |||||   ||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||||    
T  5084945 gtactccctccgtccctatatctaagcacccatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattattttttt 5085044  T
Q  397 cctaaacataccccta 412  Q
    ||||||||||||||||    
T  5085045 cctaaacataccccta 5085060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 51390424 - 51390505
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||||||||| |||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  51390424 catttgactttaattttgtccctaaatgtaaacccctttttaaattactagatgcatttattattttttcctaaacataccc 51390505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 48721756 - 48721839
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    |||||| ||||||||||||| ||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48721756 atttgattttatttttgtccctaaatgtaaccctcttttcaaattactagatgcatttattattttttcctaaacataccccta 48721839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 15512638 - 15512752
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  15512638 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 15512737  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  15512738 ctaaacataccccta 15512752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 28948821 - 28948935
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  28948821 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 28948920  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  28948921 ctaaacataccccta 28948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 47753922 - 47754008
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacataccccta 412  Q
    |||||||||||||||||||||| |||| ||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  47753922 tcatttgactttatttttgtccctaaacgtaaacccattttcaacttactagatgcatttattatatttttcctaaacataccccta 47754008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 3831263 - 3831179
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt-attttttcctaaacataccccta 412  Q
    |||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3831263 atttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattaattttttcctaaacatatcccta 3831179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 5321879 - 5321994
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt-- 396  Q
    |||| ||||||||| ||||| ||| |   ||||||| ||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||      
T  5321879 tactccctccgtccctatgtctaaacacccatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatacatttattatttttttc 5321978  T
Q  397 cctaaacataccccta 412  Q
    ||||||||||||||||    
T  5321979 cctaaacataccccta 5321994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 32047649 - 32047573
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  32047649 tttatttttatccctaaatgtaaaccctttttcaaattacttgatgcatttattattttttcttaaacataccccta 32047573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 412
Target Start/End: Original strand, 52141039 - 52141146
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaaca 404  Q
    ||||||| ||| ||||||| | ||||||| ||||||||||||| ||||||||||| |  |||||||| ||||||||||||||||| ||||||||||||||    
T  52141039 tccgtccatatatttaagcatccatttgattttatttttgtccctaaatgtaaactccttttcaaatcactagatgcatttattatttttttcctaaaca 52141138  T
Q  405 taccccta 412  Q
    || |||||    
T  52141139 tatcccta 52141146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 30898450 - 30898535
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacatacccctat 413  Q
    |||||| ||||||||||| | |||||||||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  30898450 atttgattttatttttgttcctaaatgtaaaccctttttcaaattaccagatacatttattatttttttcctaaacatacccctat 30898535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 34012702 - 34012622
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccc 409  Q
    |||||| ||||||||||||  |||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||    
T  34012702 atttgattttatttttgtcgttaaatgtaaacttttttttaaattactagatgcatttattattttttcctaaacataccc 34012622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 46732848 - 46732931
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt-cctaaacataccccta 412  Q
    |||||||||||||||||||| |||||||||| ||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||    
T  46732848 atttgactttatttttgtccctaaatgtaaatccttttttaaattacta-atgcatttattattttttccctaaacataccccta 46732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 28334106 - 28334192
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccccta 412  Q
    ||||||| |||| |||||||| |||||||||||||  ||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  28334106 catttgattttacttttgtccctaaatgtaaaccccttttcaaattactagatgcatttatttttatttttcctaaacataccccta 28334192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 412
Target Start/End: Complemental strand, 36085209 - 36085102
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaaca 404  Q
    ||||||| ||| | |||||  |||||| | ||||||||||||| |||||||||| | | |||||||||||||||||||||||||||| ||||| ||||||    
T  36085209 tccgtccctatatctaagcactcatttaattttatttttgtccctaaatgtaaatcttttttcaaattactagatgcatttattatttttttcttaaaca 36085110  T
Q  405 taccccta 412  Q
    ||||||||    
T  36085109 taccccta 36085102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 32716038 - 32715925
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  32716038 tactccctccgtccctatatctaagcacccatttgattttatttttgtctctaaatgtaaaccct-tttcaaattactagatgcgtttattatttttttc 32715940  T
Q  398 ctaaacataccccta 412  Q
     ||||||||||||||    
T  32715939 ataaacataccccta 32715925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 46495525 - 46495447
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    |||||| ||||||||||||| |||||||||| ||| ||| ||||||| ||||||||||||||||||||||||| |||||    
T  46495525 atttgattttatttttgtccgtaaatgtaaatccttttttaaattacaagatgcatttattattttttcctaagcatac 46495447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 25269593 - 25269509
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| |||| |||||| | ||||| |||||||  |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25269593 catttgattttacttttgttcctaaatataaaccccttttcaaattactagatgcatttattactttttcttaaacataccccta 25269509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 44163439 - 44163372
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  44163439 catttgactttatttttatccctaaatgtaaacccc-tttcaaattactagatgcatttattatttttt 44163372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 47643757 - 47643693
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||||| |||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  47643757 catttgattttatttttgtccataaatgtaaacccctttccaaattactagatgcatttattatt 47643693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 7957572 - 7957657
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt---attttttcctaaacataccc 409  Q
    |||||||||||||||||||| | |||||||||||||   ||||||||||||||||||||||||    |||||||||||||||||||    
T  7957572 tcatttgactttatttttgttcttaaatgtaaacccctcttcaaattactagatgcatttattttatttttttcctaaacataccc 7957657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 34696769 - 34696847
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacat 405  Q
    ||||||| ||||||||||| | |||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||    
T  34696769 catttgattttatttttgttcctaaatgtaaaccccttttcaaattactagatgtatttattatttttttcctaaacat 34696847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 33232057 - 33231972
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||| |||| |||||||| ||||| ||||  |  |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33232057 catttgattttacttttgtccctaaatataaattcattttcaaattactagatgcatttattatttttttcctaaacataccccta 33231972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 25063429 - 25063342
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgc--atttatta-ttttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||| |  |||||||| ||||||||||||||||||||||    
T  25063429 catttgattttatttttgtccttaaatgtaaactccttttcaaattactagatacatatttattatttttttcctaaacataccccta 25063342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 32152373 - 32152290
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||| ||||||||||||||| || ||||||| ||  ||| || |||||| ||||||||||||||||||||||||||||||||||    
T  32152373 catttaactttatttttgtccttagatgtaaatcccttttgaa-ttactatatgcatttattattttttcctaaacataccccta 32152290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 34102578 - 34102503
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacat 405  Q
    |||||| ||||||||||||| ||||| ||| | || |||||||||| ||||||||||||||||||||||||||||||    
T  34102578 atttgattttatttttgtccctaaatataaccact-tttcaaattattagatgcatttattattttttcctaaacat 34102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 35365868 - 35365932
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||||||||||||||||||| |||| | ||||||  ||||||||||||||||||||||||||||    
T  35365868 catttgactttatttttgtccctaaacgcaaacccattttcaaattactagatgcatttattatt 35365932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 51997173 - 51997093
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacatac 407  Q
    ||||||| ||||||||||||| ||||||||| |||  ||||||||||| | |||||||||||||| |||||||||||||||    
T  51997173 catttgattttatttttgtccctaaatgtaatccccttttcaaattacaatatgcatttattatttttttcctaaacatac 51997093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 10160917 - 10160846
Alignment:
Q  340 tttttgtccataaatgtaaaccc-tatttcaaattactagatgcatttattatt-ttttcctaaacataccc 409  Q
    ||||||||| ||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||    
T  10160917 tttttgtccctaaatgtaaacccctttttcaaattactagatgcgtttattatttttttcctaaacataccc 10160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 412
Target Start/End: Complemental strand, 3143644 - 3143535
Alignment:
Q  305 ctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaa 402  Q
    |||||||| ||| |||||||   ||||||| ||||||||||||| |||||||| ||||  ||||||||||  |||||||||||||||  ||||| | |||    
T  3143644 ctccgtccctatatttaagcacccatttgattttatttttgtccctaaatgtacaccccttttcaaattatcagatgcatttattattattttttccaaa 3143545  T
Q  403 cataccccta 412  Q
    ||||||||||    
T  3143544 cataccccta 3143535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 5852598 - 5852668
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacata 406  Q
    ||||||||| | | |||||||||| |   ||||||||||||||||||||||||||||||||||||||||||    
T  5852598 tttatttttattcttaaatgtaaaactcttttcaaattactagatgcatttattattttttcctaaacata 5852668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 28723537 - 28723622
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccccta 412  Q
    |||||| ||||||||||||| ||||| |||||    ||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  28723537 atttgattttatttttgtccttaaatataaacatcttttcaaattactagatgcagttattattatttttcctaaacataccccta 28723622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 4817792 - 4817872
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt-ttcctaaacatac 407  Q
    ||||||| ||||||||||||| ||||||||||| |  || |||||||||||||| |||||||||||| ||| |||||||||    
T  4817792 catttgattttatttttgtccttaaatgtaaactcatttccaaattactagatgtatttattattttgttcttaaacatac 4817872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 4829592 - 4829672
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt-ttcctaaacatac 407  Q
    ||||||| ||||||||||||| ||||||||||| |  || |||||||||||||| |||||||||||| ||| |||||||||    
T  4829592 catttgattttatttttgtccttaaatgtaaactcatttccaaattactagatgtatttattattttgttcttaaacatac 4829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 9684582 - 9684670
Alignment:
Q  308 cgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||| | ||||| | ||||||| |||||||||||   |||||||||||||  ||| |||||| |||||||||||||||||||||    
T  9684582 cgtccttatatctaagcatccatttgattttatttttgttattaaatgtaaacccctttttaaattattagatgcatttattatttttt 9684670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 25258539 - 25258463
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||| | ||||||||||  |  ||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  25258539 tttatttttgttcttaaatgtaaattcattttcaaattacaagatgcatttattatttttttctaaacatactccta 25258463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 409
Target Start/End: Original strand, 29302386 - 29302457
Alignment:
Q  339 atttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    |||||||||| ||||| |||| |   |||||||||||||||||||||||||| |||||||||||||||||||    
T  29302386 atttttgtccttaaatataaatctcttttcaaattactagatgcatttattatttttttcctaaacataccc 29302457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 3072350 - 3072273
Alignment:
Q  331 ttgactttatttttgtccataaatgtaaaccctattt-caaattactagatgcatttattattttttcctaaacatacc 408  Q
    |||||||||||||||| | ||||||||| || ||||| ||||||| ||||| ||||||||||||||| |||||||||||    
T  3072350 ttgactttatttttgttcctaaatgtaa-ccttatttacaaattagtagatacatttattatttttttctaaacatacc 3072273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 4813362 - 4813427
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttatta--ttttttcctaaacata 406  Q
    |||||| ||||| |||||||  ||||||||||||||||||||||||||  ||||||||||||||||    
T  4813362 ttgtccctaaatataaaccccttttcaaattactagatgcatttattattttttttcctaaacata 4813427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 46591320 - 46591234
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacataccccta 412  Q
    |||||||||||||||||||||  || ||||||||  | ||||||||||||||||| ||||||||| ||||||| ||| | |||||||    
T  46591320 tcatttgactttatttttgtctttagatgtaaactttttttcaaattactagatgtatttattatctttttcccaaatacaccccta 46591234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 9380663 - 9380727
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatacc 408  Q
    |||||| |||||||||||||   ||||||||||||||||||||||||| |||||||| ||||||||    
T  9380663 ttgtccctaaatgtaaacccatattcaaattactagatgcatttatta-tttttccttaacatacc 9380727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 404
Target Start/End: Original strand, 16395430 - 16395512
Alignment:
Q  320 taagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaaca 404  Q
    ||||| || |||||||||||||||||| | |||||| |||| || ||| |||||| ||||||||||||||| |||||||||||||    
T  16395430 taagcatttatttgactttatttttgttcgtaaatgcaaactcttttt-aaattattagatgcatttatta-tttttcctaaaca 16395512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 24415206 - 24415142
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||||||||||||||| ||| ||||| |||| ||  ||| ||||||||||||||||||||||||    
T  24415206 catttgactttatttttatccttaaatataaatccccttttaaattactagatgcatttattatt 24415142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 23982477 - 23982563
Alignment:
Q  327 tcatttgactttattttt-gtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||||||||||  | ||| |||||||||||  ||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  23982477 tcatttgactttatttttatttcat-aatgtaaaccccttttcaaattgctagatacatttattattattttcctaaacatatcccta 23982563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 44652777 - 44652832
Alignment:
Q  358 aaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||    
T  44652777 aaccctcttttaaattattagatgcatttattatttttttcctaaacataccccta 44652832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 15911461 - 15911519
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacatacc 408  Q
    ||||| |||||||  |||||||||| ||||||||| ||||||||||| |||||||||||    
T  15911461 taaatataaaccccttttcaaattattagatgcatgtattatttttttctaaacatacc 15911519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 402
Target Start/End: Complemental strand, 49033889 - 49033815
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttcctaaa 402  Q
    |||||| |||| |||||||| ||||  |||||||  ||| ||||||||||||||||||| |||||||||||||||    
T  49033889 atttgattttacttttgtccctaaacataaacccctttttaaattactagatgcatttatttattttttcctaaa 49033815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 13723377 - 13723443
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcatttatta----ttttttcctaaacataccccta 412  Q
    ||||| |||||||  ||||||||||||||||||||||||||    ||||||||||||||| ||||||    
T  13723377 taaatataaaccccttttcaaattactagatgcatttattattatttttttcctaaacatgccccta 13723443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 41737322 - 41737221
Alignment:
Q  293 aaaatgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||| |||| ||||||||| ||| | ||||  ||||||| || |||||||||||| |||| ||||||||  |||||||||| ||||   ||||||||||    
T  41737322 aaaatatactccctccgtccctatatctaagtattcatttaacgttatttttgtccctaaacgtaaacccattttcaaattattagacatatttattatt 41737223  T
Q  393 tt 394  Q
    ||    
T  41737222 tt 41737221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 8877952 - 8877904
Alignment:
Q  365 tttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  8877952 tttcaaattactagatgcatttattatttttttaataaacataccccta 8877904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 13145598 - 13145550
Alignment:
Q  365 tttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  13145598 tttcaaattactagatgtattaattatttttttcctaaacataccccta 13145550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 408
Target Start/End: Complemental strand, 13699011 - 13698967
Alignment:
Q  365 tttcaaattactagatgcatttattatttttt-cctaaacatacc 408  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  13699011 tttcaaattactagttgcatttattattttttccctaaacatacc 13698967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 15179619 - 15179564
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    ||||||||||| |||||||||||| ||| ||| |||||| |||||||||||||||||    
T  15179619 tttatttttgttcataaatgtaaaaccttttt-aaattattagatgcatttattatt 15179564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 17426652 - 17426696
Alignment:
Q  368 caaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||||    
T  17426652 caaattattagatgcatttattattttttcctaaatatatcccta 17426696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 44395774 - 44395687
Alignment:
Q  309 gtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    |||| ||| |||||| |||||||||| ||||||||| ||| ||||| |||| |   ||| |||||| || ||||||||||||||||||    
T  44395774 gtccctatatttaagttttcatttgattttatttttatccttaaatataaatctctttttaaattattaaatgcatttattatttttt 44395687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 13353028 - 13352970
Alignment:
Q  350 taaatgtaaaccctatt-tcaaattactagatgcatttattattttttcctaaacatac 407  Q
    |||||||||||||  || ||||||||||||||||| ||||| ||||||||| |||||||    
T  13353028 taaatgtaaacccatttatcaaattactagatgcacttattcttttttccttaacatac 13352970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 20564972 - 20564912
Alignment:
Q  350 taaatgtaaaccctatttcaaattactagatgcat---ttattattttttcctaaacatac 407  Q
    ||||| |||| ||| ||||||||||||||||||||   ||||||||||| |||||||||||    
T  20564972 taaatataaaacctttttcaaattactagatgcatttgttattatttttccctaaacatac 20564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 409
Target Start/End: Original strand, 8984585 - 8984630
Alignment:
Q  365 tttcaaattactagatgcatttattat-tttttcctaaacataccc 409  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||    
T  8984585 tttcaaattactagatgcatttattttatttttcctaaacttaccc 8984630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 4082106 - 4082058
Alignment:
Q  365 tttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||||| |||||||| ||||| |||||||||||||| |||||    
T  4082106 tttcaaattactaaatgcatttgttattattttcctaaacatatcccta 4082058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 12844037 - 12844097
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||| |||||||||||||  ||| ||||||| | | ||||| ||||||||||    
T  12844037 tttatttttgtccctaaatgtaaacccctttttaaattacaacacgcattaattatttttt 12844097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 31305515 - 31305447
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctattt 367  Q
    |||| ||||||||| ||| | |||||  |||||||||||||| ||||||| | ||||||||||| ||||    
T  31305515 tactccctccgtccctatatctaagcactcatttgactttatgtttgtccctgaatgtaaaccccattt 31305447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 404
Target Start/End: Original strand, 32321895 - 32321931
Alignment:
Q  368 caaattactagatgcatttattattttttcctaaaca 404  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  32321895 caaattactatatgcatttattattttttcttaaaca 32321931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 1800 - 1885
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat-tttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1800 catttgactttatttttgtccctcaatgtaaaccccttttcaaattactagatgcatttattatgtttttcctaaacataccccta 1885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 38378 - 38448
Alignment:
Q  342 tttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38378 tttgtccttaaatgtaaatcctttttcaaattactagatgcatttattattttttcctaaacataccccta 38448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 27642752 - 27642638
Alignment:
Q  296 atgtacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-tt 394  Q
    ||||||| ||||||||| ||| | |||||  |||||||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||| ||    
T  27642752 atgtactccctccgtccctatatgtaagcactcatttgattttatttttgtccataaatataaactccttttcaaattactagatgcatttattattatt 27642653  T
Q  395 ttcctaaacataccc 409  Q
    || ||||||||||||    
T  27642652 tttctaaacataccc 27642638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 39690343 - 39690457
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttc 397  Q
    |||| ||||||||| ||| | |||||   ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  39690343 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 39690442  T
Q  398 ctaaacataccccta 412  Q
    |||||||||||||||    
T  39690443 ctaaacataccccta 39690457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 3631004 - 3631088
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||| ||||||||| | | ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3631004 catttgattttatttttattcttaaatgtaaactctttttcaaattactagatgtatttattattttttcctaaacataccccta 3631088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 4738839 - 4738763
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  4738839 tttatttttgtccctaaatgtaaactctcttttaaattactagatgcatttattaatttttcctaaacataccccta 4738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 15898319 - 15898429
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--ttttt 396  Q
    |||| ||||||||| ||| | ||||| | | ||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||  |||||    
T  15898319 tactccctccgtccctatatctaagcatccgtttgactttatttttgtccctaaatataaactctttttcaaattactagatgcatttattattattttt 15898418  T
Q  397 cctaaacatac 407  Q
    |||||||||||    
T  15898419 cctaaacatac 15898429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 21912338 - 21912253
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| ||||||||||| |  ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  21912338 catttgattttatttttgtccctaaatgtaaactccttttcaaattacaagatgcatttattattattttcctaaacataccccta 21912253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 412
Target Start/End: Original strand, 25017534 - 25017645
Alignment:
Q  305 ctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaa---attactagatgcatttatta-ttttttccta 400  Q
    |||||||| ||| | ||||| ||||||||||||||||||||||| |||||||||||||  ||||||   ||||||| |||||||||||| ||||||||||    
T  25017534 ctccgtccctatatctaagcattcatttgactttatttttgtccttaaatgtaaaccccctttcaaattattactatatgcatttattatttttttccta 25017633  T
Q  401 aacataccccta 412  Q
    || |||||||||    
T  25017634 aatataccccta 25017645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 27925491 - 27925406
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    ||||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  27925491 catttgactttatttttgtccctaaatgtaaatcccttttcaaattactagatgcatttattattttttttctaaacatatcccta 27925406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 412
Target Start/End: Complemental strand, 5845401 - 5845309
Alignment:
Q  321 aagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatt-attttttcctaaacataccccta 412  Q
    |||| |||||||||||||||||||||   |||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  5845401 aagccttcatttgactttatttttgtttctaaatgtaaatcctctttcaaattattagatgcatttattaattttttcctaaacatactccta 5845309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 412
Target Start/End: Original strand, 35568869 - 35568976
Alignment:
Q  306 tccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaaca 404  Q
    ||||||| ||| | ||||| | ||||| | ||||||||||||| ||| |||||||||  ||||||||||||| |||||||||||||| ||||||||||||    
T  35568869 tccgtccctatatctaagcatccatttaattttatttttgtccctaattgtaaaccccttttcaaattactaaatgcatttattattattttcctaaaca 35568968  T
Q  405 taccccta 412  Q
    ||||||||    
T  35568969 taccccta 35568976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 36177540 - 36177428
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--tttt 396  Q
    |||| ||||||||| ||| | ||||| | ||||||| ||||||||||||| ||||||||||  |  ||||||||||||||||| ||||||||||  ||||    
T  36177540 tactccctccgtccatatatctaagcatccatttgattttatttttgtccctaaatgtaaattcattttcaaattactagatgtatttattatttttttt 36177441  T
Q  397 cctaaacataccc 409  Q
    |||||||||||||    
T  36177440 cctaaacataccc 36177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 15966971 - 15967054
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||| ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  15966971 atttaactttatttttgtccctaaatgtaaacc-tctttcaaattactagatgcatttattatttttttcttaaagataccccta 15967054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 10523159 - 10523245
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcat---ttattattttttc-ctaaacataccccta 412  Q
    ||||||||||||||||||||||||||||||||  || |||||||||| |||||||||   ||||||||||||| |||||||||||||||    
T  10523159 catttgactttatttttgtccataaatgtaaa--ctttttcaaattattagatgcatttattattattttttctctaaacataccccta 10523245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 398
Target Start/End: Original strand, 36750633 - 36750732
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    |||||| ||||||| ||| |||| || | ||||||| ||||||||||||| ||||| ||||| |  ||||||||||||||||||||||||| ||||||||    
T  36750633 tacttcttccgtccctatatttaggcatccatttgattttatttttgtccctaaatataaacgccttttcaaattactagatgcatttatttttttttcc 36750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 20975690 - 20975776
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttattttttcctaaacataccccta 412  Q
    |||||||| ||||||||||| | ||||||||||| |  ||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  20975690 tcatttgattttatttttgttcttaaatgtaaactccttttcaaattactagatgcatttattttttttttcctaaacatgccccta 20975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 129839 - 129758
Alignment:
Q  312 cttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattt 393  Q
    ||||| ||||||| ||||||||||||||||||||||  || || |||||| | ||| |||||||||||||||||||||||||    
T  129839 cttatatttaagcattcatttgactttatttttgtctctacatataaaccattttttaaattactagatgcatttattattt 129758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 396
Target Start/End: Complemental strand, 7510758 - 7510689
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||||| |||||| ||||||||||| |  |||||||||||||||| |||||||||||||||    
T  7510758 tcatttgactttattattgtccctaaatgtaaacgccttttcaaattactagatacatttattatttttt 7510689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 38972015 - 38972095
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    |||||||||||||||| ||| ||||| |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||    
T  38972015 atttgactttattttt-tccctaaatttaaaccccttttcaaattaatagatgcatttattatttttttcctaaacataccc 38972095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 5151086 - 5151169
Alignment:
Q  327 tcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttat-tattttttcctaaacataccc 409  Q
    |||||||| ||||||||||||| ||||||||||| |  ||| |||||||||||||||||| |  ||||||||||||||||||||    
T  5151086 tcatttgattttatttttgtccctaaatgtaaactccctttgaaattactagatgcatttgtcaattttttcctaaacataccc 5151169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 9946243 - 9946329
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta--ttttttcctaaacataccccta 412  Q
    ||||||| ||||||||||||| |||||||||  |   |||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  9946243 catttgattttatttttgtccctaaatgtaattctcttttcaaattattagatgcatttattattttttttcctaaacataccccta 9946329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 3558921 - 3558995
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccc 409  Q
    ||||||||||||| ||||| ||| ||   |||||||||||||||||||||||||| |||||||||||||||||||    
T  3558921 tttatttttgtccctaaatataaccctcttttcaaattactagatgcatttattatttttttcctaaacataccc 3558995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 31641047 - 31641163
Alignment:
Q  299 tacttcctccgtccttatgtttaagctttcatttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcat---ttattattttt 395  Q
    |||| ||||||||||||| | ||| |  || ||||||||||||||||||| ||||| |||| |   ||||||||||||||||| ||   |||||||||||    
T  31641047 tactccctccgtccttatatgtaaacactcgtttgactttatttttgtccctaaatttaaatctcttttcaaattactagatgtatttattattattttt 31641146  T
Q  396 tcctaaacataccccta 412  Q
    | |||||||||||||||    
T  31641147 ttctaaacataccccta 31641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 406
Target Start/End: Complemental strand, 10934221 - 10934145
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacata 406  Q
    |||||||||||||||| ||  ||||||||||  || |||||||||| |||||||||||||||||||||| ||||||||    
T  10934221 atttgactttattttt-tctttaaatgtaaattctttttcaaattattagatgcatttattattttttcttaaacata 10934145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 29866407 - 29866322
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||||||||||| || | | ||||||||||||   |||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  29866407 catttgactttattctttttcctaaatgtaaacctcttttcaagttactagatgcatttataatttttttcctaaacataccccta 29866322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 34877884 - 34877799
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt-ttcctaaacataccccta 412  Q
    ||||||| |||||||||||||||||||||||| ||  ||| |||||| || |||||||||||||||| |||||||| |||| ||||    
T  34877884 catttgattttatttttgtccataaatgtaaatccccttttaaattattatatgcatttattattttattcctaaatatactccta 34877799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 4857379 - 4857447
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttttt 396  Q
    ||||||||||||||||||||  ||||||||||| |  ||||||||||| | ||||||||||||||||||    
T  4857379 catttgactttatttttgtctctaaatgtaaactcattttcaaattaccaaatgcatttattatttttt 4857447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 36347488 - 36347572
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||| ||||||||||||||||||||||||     |||||||||| |||||||||||||||  ||||||||||||||| |||||    
T  36347488 atttgattttatttttgtccataaatgtaaatttcttttcaaattattagatgcatttattacctttttcctaaacatatcccta 36347572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 18729810 - 18729725
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattat--tttttcctaaacataccccta 412  Q
    ||||||| ||||||||  ||| ||||| |||||||  |||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  18729810 catttgattttatttta-tccctaaatctaaaccccttttcaaattattagatgcatttattattatttttcctaaacataccccta 18729725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 366 - 411
Target Start/End: Original strand, 16039 - 16085
Alignment:
Q  366 ttcaaattactagatgcatttattatt-ttttcctaaacatacccct 411  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  16039 ttcaaattactagatgcatttattattattttcctaaacatacccct 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 7736183 - 7736113
Alignment:
Q  343 ttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacataccccta 412  Q
    |||||| ||||| |||||||  ||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  7736183 ttgtccctaaatataaaccccttttcaaattactagacgcatttattatttttttcctaaacatatcccta 7736113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 25690539 - 25690597
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattt 386  Q
    ||||||| ||||||||||||| |||||||||||||  |||||| |||||||||||||||    
T  25690539 catttgattttatttttgtccctaaatgtaaaccccttttcaacttactagatgcattt 25690597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 401
Target Start/End: Original strand, 32401341 - 32401414
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaa 401  Q
    ||||||||||||||||||||| |||||| |||| || |||||||||||||||  ||||||||||| |||||||||    
T  32401341 catttgactttatttttgtccctaaatgcaaactct-tttcaaattactagaaacatttattattattttcctaa 32401414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 40979098 - 40979183
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcattta-ttatt--ttttcctaaacataccccta 412  Q
    ||||| ||||||||| ||| |||||||||| ||  ||||||||| ||||||||||||| |||||  ||||||||||||||||||||    
T  40979098 tttgattttatttttatccctaaatgtaaagcccttttcaaatttctagatgcatttatttatttattttcctaaacataccccta 40979183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 8717882 - 8717930
Alignment:
Q  365 tttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  8717882 tttcaaattactagatgcacttattatttttttcctaaacataccccta 8717930  T

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Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 43454196 - 43454121
Alignment:
Q  331 ttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacata 406  Q
    |||||||||||||||||  | ||||||||| |  |||||||||||  |||| |||||| |||||||||||||||||    
T  43454196 ttgactttatttttgtctctcaatgtaaacaccttttcaaattacatgatgtatttataattttttcctaaacata 43454121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 21574792 - 21574852
Alignment:
Q  355 gtaaaccctatttcaaattactagatgcat---ttattattttttcctaaacataccccta 412  Q
    ||||||| | ||||||||||||||||||||   ||||| ||||||||||||||||||||||    
T  21574792 gtaaaccgtctttcaaattactagatgcatttgttatttttttttcctaaacataccccta 21574852  T

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Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 29874526 - 29874465
Alignment:
Q  327 tcatttgactttattttt-gtccataaatgtaaaccctatttcaaattactagatgcattta 387  Q
    |||||||||||| ||||| || | |||||||||||||  |||||||||||||||||||||||    
T  29874526 tcatttgacttttttttttgttcctaaatgtaaaccccctttcaaattactagatgcattta 29874465  T

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Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 409
Target Start/End: Complemental strand, 10656768 - 10656725
Alignment:
Q  367 tcaaattactagatgcatttatt-attttttcctaaacataccc 409  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  10656768 tcaaattattagatgcatttattaattttttcctaaacataccc 10656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 392
Target Start/End: Original strand, 19281376 - 19281439
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt 392  Q
    |||||| ||||||||||| ||||||| ||||| |  |||||||| |||||||| ||||||||||    
T  19281376 atttgattttatttttgttcataaatataaacgcattttcaaatcactagatgtatttattatt 19281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 394
Target Start/End: Complemental strand, 27798371 - 27798308
Alignment:
Q  331 ttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatttt 394  Q
    |||||||||||||||| | |||||||||| |   ||| ||||||||| ||||||||||||||||    
T  27798371 ttgactttatttttgttcctaaatgtaaatcaccttttaaattactaaatgcatttattatttt 27798308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 16496798 - 16496740
Alignment:
Q  340 tttttgtccataaatgtaaaccctatttcaaattactagatgcatttat-tattttttc 397  Q
    ||||||||| |||||||||| ||  ||||| |||||||||||||||||| |||||||||    
T  16496798 tttttgtccttaaatgtaaatcccctttcatattactagatgcatttatatattttttc 16496740  T

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Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 407
Target Start/End: Original strand, 23648030 - 23648072
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||    
T  23648030 tttcaaattattagatacatttattattttttcctaaatatac 23648072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 407
Target Start/End: Complemental strand, 23810543 - 23810501
Alignment:
Q  365 tttcaaattactagatgcatttattattttttcctaaacatac 407  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||    
T  23810543 tttcaaattattagatacatttattattttttcctaaatatac 23810501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 33862797 - 33862838
Alignment:
Q  365 tttcaaattactagatgcatttatta-ttttttcctaaacat 405  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  33862797 tttcaaattactagatgcatttattacttttttcttaaacat 33862838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 27588059 - 27588011
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattact 376  Q
    ||||||| ||||||||||||| |||||||||||||  || |||||||||    
T  27588059 catttgattttatttttgtccgtaaatgtaaacccctttccaaattact 27588011  T

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Target: scaffold0013 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 49354 - 49270
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcctaaacataccccta 412  Q
    ||||| ||||||||||| ||  |||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49354 catttaactttatttttttctttaaatgtaaatcccttttcaaattactagatgtatttattattttttcctaaacataccccta 49270  T

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Target: scaffold0182 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 22647 - 22561
Alignment:
Q  328 catttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta--ttttttcctaaacataccccta 412  Q
    ||||||||||||||||||||  || |||||||| |  ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22647 catttgactttatttttgtctctacatgtaaacacactttcaaattactagatgcatttattaatttttttcctaaacataccccta 22561  T

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Target: scaffold0559 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 6725 - 6647
Alignment:
Q  330 tttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt-ttttcctaaacatac 407  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||| |||||||||||||||    
T  6725 tttgactttatttttgtccttaaatgtaaacctcatttcaaattactacatgcatttaatattattttcctaaacatac 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 24276 - 24192
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttatta-ttttttcctaaacataccccta 412  Q
    |||||| ||||||||||||| |||||||||| | | ||||||||||||||||||||||| || |||||| |||||||||||||||    
T  24276 atttgattttatttttgtccctaaatgtaaatcttctttcaaattactagatgcatttactattttttttctaaacataccccta 24192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 214824 - 214753
Alignment:
Q  344 tgtccataaatgtaaaccctatttcaaattactagatgcatttattat---tttttcctaaacataccccta 412  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||   ||||| |||||||||||||||    
T  214824 tgtccttaaatgtaaaccccttttcaaattactagatgcatttattatatattttttctaaacataccccta 214753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 25916 - 25831
Alignment:
Q  329 atttgactttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattatt--ttttcctaaacataccccta 412  Q
    |||||| |||| |||||||| ||||||||||||   ||||||||||||||||  ||||||||||  |||| |||||||||||||||    
T  25916 atttgattttagttttgtccctaaatgtaaacctcttttcaaattactagatatatttattatttttttttctaaacataccccta 25831  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 44763 - 44823
Alignment:
Q  336 tttatttttgtccataaatgtaaaccctatttcaaattactagatgcatttattattttttcc 398  Q
    ||||||||||||| |||||||||||||| ||||||||||| | | ||||| ||||||||||||    
T  44763 tttatttttgtcc-taaatgtaaaccct-tttcaaattacaacacgcattaattattttttcc 44823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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