View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18018_high_20 (Length: 290)
Name: NF18018_high_20
Description: NF18018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18018_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 12 - 272
Target Start/End: Original strand, 39261779 - 39262039
Alignment:
| Q |
12 |
aacctgtgttgacagaaaatataattgaatgtagttgatgcttgaaattgaagacaaaggtgataattgatgagcttgtcaaactctacagtttagcaag |
111 |
Q |
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| T |
39261779 |
aacctgtgttgacagaaaatataattgaatgtagttgatgcttgaaattgaagacaaaggtgataattgatgagcttgtcaaactctacagtttagcaag |
39261878 |
T |
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| Q |
112 |
gttttgattcactctgaagcattatgaaatctcagccacaaatttgagagcccaagggaccactactttgcaagtttccaaaccctactactctccatac |
211 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39261879 |
gttttgattcattctgaagcattatgaaatctcagccacaaatttgagagcccaagggaccactactttgcaagtttccaaaccctactactctccatac |
39261978 |
T |
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| Q |
212 |
ctgtgacacaaaatgctactggtttgtacttgctgcttttctataattacatcattagctc |
272 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
39261979 |
ctgtgacacaaaatgctactggtttgtacttactgcttttctataattacatcattagctc |
39262039 |
T |
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