View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18018_high_8 (Length: 507)
Name: NF18018_high_8
Description: NF18018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18018_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 453; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 24 - 484
Target Start/End: Original strand, 39262043 - 39262503
Alignment:
| Q |
24 |
aaaagaatgtggttcagtatgtacttgtaaaatataaaatttctgtaattgaaaaggtagaaaatggatgataactattgtaagtaaatcattgttaaca |
123 |
Q |
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| T |
39262043 |
aaaagaatgtggttcagtatgtacttgtaaaatataaaatttccgtaattgaaaaggtagaaaatggatgataactattgtaagtaaatcattgttaaca |
39262142 |
T |
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| Q |
124 |
tatttttattgcaagaaaaagaattgggtttaccattaaatttttggattgttgtgagtgtggacatgccgacatggaatgaaaattgattaaaaaataa |
223 |
Q |
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| T |
39262143 |
tatttttattgcaagaaaaagaattgggtttaccattaaatttttggattgttgtgagtgtggacatgccgacatggaatgaaaattgattaaaaaataa |
39262242 |
T |
|
| Q |
224 |
taatgattcacaaacaccaagacgtaggtaaaatagtagtaacaaacatgtggatgagtgaatgttaacttgatatcagtatctactgttacagtgttac |
323 |
Q |
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| T |
39262243 |
taatgattcacaaacaccaagacgtaggtaaaatagtagtaacaaacatgtggatgagtgaatgttaacttaatatcagtatctactgttacagtgttac |
39262342 |
T |
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| Q |
324 |
tattctccataagaccaaaatcacttactgtgctgatttggagtcctcaaactgttttatagatacaattggtgatcacagtgaagttgtgcttaatgta |
423 |
Q |
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| T |
39262343 |
tattctccataagaccaaaatcacttactgtgctgatttggagtcctcaaactgttttatagatacaattggtgatcacagtgaagttgtgcttaatgta |
39262442 |
T |
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| Q |
424 |
tagctgtccattaaacaataaagacagaacatccacttgaattattatatttctatgttct |
484 |
Q |
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| T |
39262443 |
tagctgtccattaaacaataaagacagaacatccacttgaattattatatttctatgttct |
39262503 |
T |
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