View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18018_low_7 (Length: 510)

Name: NF18018_low_7
Description: NF18018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18018_low_7
NF18018_low_7
[»] chr2 (10 HSPs)
chr2 (12-482)||(3737174-3737653)
chr2 (341-464)||(14166957-14167081)
chr2 (405-464)||(8184117-8184177)
chr2 (404-464)||(14385144-14385205)
chr2 (356-465)||(16813640-16813749)
chr2 (356-465)||(16852919-16853028)
chr2 (341-423)||(37183251-37183333)
chr2 (404-464)||(11522136-11522197)
chr2 (413-465)||(36641930-36641983)
chr2 (404-464)||(42946680-42946741)
[»] chr5 (11 HSPs)
chr5 (341-464)||(19389784-19389908)
chr5 (341-464)||(13293940-13294064)
chr5 (342-465)||(10437977-10438102)
chr5 (404-464)||(29799701-29799762)
chr5 (421-464)||(12063942-12063985)
chr5 (395-464)||(17668090-17668160)
chr5 (413-464)||(1935063-1935115)
chr5 (421-465)||(2679841-2679885)
chr5 (413-464)||(5088826-5088878)
chr5 (392-464)||(6632701-6632773)
chr5 (368-463)||(41923186-41923282)
[»] chr6 (6 HSPs)
chr6 (341-446)||(13380530-13380638)
chr6 (368-465)||(20820495-20820593)
chr6 (341-462)||(32719344-32719467)
chr6 (404-464)||(20381822-20381883)
chr6 (368-464)||(34557128-34557225)
chr6 (349-464)||(26713862-26713978)
[»] scaffold0991 (1 HSPs)
scaffold0991 (341-448)||(3239-3348)
[»] scaffold0007 (1 HSPs)
scaffold0007 (342-445)||(68925-69028)
[»] chr1 (15 HSPs)
chr1 (368-465)||(28848754-28848852)
chr1 (366-465)||(50226056-50226156)
chr1 (393-446)||(33643686-33643740)
chr1 (367-464)||(40243388-40243488)
chr1 (404-464)||(41432718-41432779)
chr1 (341-464)||(50476528-50476653)
chr1 (421-465)||(32287662-32287706)
chr1 (374-465)||(33324657-33324749)
chr1 (409-464)||(9315011-9315066)
chr1 (421-464)||(9861273-9861316)
chr1 (368-446)||(15426249-15426325)
chr1 (395-464)||(39886880-39886950)
chr1 (404-464)||(20712172-20712233)
chr1 (421-462)||(34749973-34750014)
chr1 (368-464)||(52073414-52073511)
[»] chr8 (11 HSPs)
chr8 (368-464)||(16424165-16424263)
chr8 (404-464)||(27085412-27085473)
chr8 (342-422)||(3393974-3394054)
chr8 (369-465)||(41866082-41866179)
chr8 (394-464)||(1839776-1839847)
chr8 (394-464)||(10878738-10878809)
chr8 (341-462)||(26772610-26772733)
chr8 (421-464)||(28517216-28517259)
chr8 (375-464)||(32188-32278)
chr8 (404-464)||(41455323-41455384)
chr8 (424-464)||(32158850-32158890)
[»] chr4 (11 HSPs)
chr4 (341-464)||(516054-516180)
chr4 (371-464)||(24682952-24683046)
chr4 (404-464)||(52430531-52430592)
chr4 (341-462)||(29114201-29114324)
chr4 (413-465)||(368130-368183)
chr4 (404-460)||(24662707-24662764)
chr4 (404-464)||(37662707-37662768)
chr4 (368-464)||(47063710-47063807)
chr4 (413-464)||(28880064-28880116)
chr4 (424-464)||(43167048-43167088)
chr4 (413-464)||(48620362-48620414)
[»] chr3 (17 HSPs)
chr3 (356-465)||(49183701-49183811)
chr3 (368-464)||(1132891-1132988)
chr3 (394-464)||(7302138-7302209)
chr3 (405-464)||(46891451-46891511)
chr3 (342-464)||(52620791-52620915)
chr3 (394-464)||(4247171-4247242)
chr3 (394-460)||(11500155-11500222)
chr3 (394-464)||(32858884-32858955)
chr3 (341-462)||(38639579-38639702)
chr3 (421-464)||(39966834-39966877)
chr3 (413-464)||(50201639-50201690)
chr3 (341-462)||(53664567-53664690)
chr3 (404-464)||(15499255-15499316)
chr3 (404-464)||(27922025-27922086)
chr3 (404-464)||(29623300-29623361)
chr3 (404-464)||(35283151-35283212)
chr3 (368-443)||(37457031-37457107)
[»] chr7 (13 HSPs)
chr7 (342-446)||(39856349-39856454)
chr7 (368-464)||(43348195-43348292)
chr7 (375-465)||(38505299-38505390)
chr7 (404-464)||(21687497-21687558)
chr7 (401-464)||(7347843-7347907)
chr7 (394-464)||(1277992-1278063)
chr7 (395-465)||(33872075-33872146)
chr7 (341-462)||(45940368-45940491)
chr7 (404-465)||(13044211-13044273)
chr7 (395-464)||(14676285-14676355)
chr7 (423-464)||(4787959-4788000)
chr7 (421-465)||(35264847-35264891)
chr7 (413-464)||(43741768-43741820)
[»] scaffold0119 (1 HSPs)
scaffold0119 (395-465)||(37176-37247)
[»] scaffold0263 (1 HSPs)
scaffold0263 (404-465)||(12214-12276)
[»] scaffold0002 (1 HSPs)
scaffold0002 (374-463)||(90842-90932)


Alignment Details
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 12 - 482
Target Start/End: Complemental strand, 3737653 - 3737174
Alignment:
Q  12 gaagaatatgtggtgtgtgccaagtgccaattgcgtcggtgtgttgttatcttttct--------gcaatctgttgatggatgatgtttagatggaaagg 103  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  3737653 gaagaaaatatggtgtgtgccaagtgccaattgcgtcggtgtgttgttatcttttctcattgtgtgcaatctgttgatggatgatgtttagatggaaagg 3737554  T
Q  104 aaaaagaaaaggacatgacaataaaaccattttaatttgcatatcataaggaagcaaccaatgagaaaactacacnnnnnnnnnnnnnnnnaacaaacta 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||    
T  3737553 aaaaagaaaaggacatgacaataaaaccattttaatttgcatatcataaggaagcaaccaatgagaaaactacactttatttttatttttcaacaaacta 3737454  T
Q  204 aattagttcacttaaattgatgttttatttgcgagtttggaggagaaacgatacgagaggtttggaagnnnnnnnn-gagtatgtggaagaaatagatga 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||         ||| |||||||||||||||||||    
T  3737453 aattagttcacttaaattgatgttttatttgcgagtttggaggagaaaagatacgagaggtttggaagaaaaaaaaagagcatgtggaagaaatagatga 3737354  T
Q  303 tattgagaggnnnnnnntttgggggttaannnnnnnnncataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagag 402  Q
    ||||||||||        |||||||||||         |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3737353 tattgagaggaaaaaaaattgggggttaatttttctt-cataatacaaaatcatcctcatttgaagaactcaaaaattgtattagaaaagagttttagag 3737255  T
Q  403 tgtttacataaattcttc-aatttaatatatgtagttataatattttttaaactaaaaatatagggtgttgttaaccggtg 482  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| || |||||||||    
T  3737254 tgtttacataaattcttcaaatttaatatatgtagttataatatttttaaaattaaaaatatagggtgctgctaaccggtg 3737174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 341 - 464
Target Start/End: Original strand, 14166957 - 14167081
Alignment:
Q  341 cataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagtta 439  Q
    ||||||| ||||||||| ||||||||  |||| |||||||||||||||| | |||||| ||| |||||||||| || ||| |||||||| ||||| ||||    
T  14166957 cataatataaaatcatcatcatttaagaaactaaaaaattgtattagaataaagttttggagggtttacataattttttcaaatttaatctatgttgtta 14167056  T
Q  440 taatattttttaaactaaaaatata 464  Q
    ||||||| ||  || ||||||||||    
T  14167057 taatattcttagaattaaaaatata 14167081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 8184177 - 8184117
Alignment:
Q  405 tttacataaattcttca-atttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||| ||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||    
T  8184177 tttacatgaattcttcagatttaatctatgtacttataatattttttaaattaaaaatata 8184117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 14385144 - 14385205
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||| || ||||||| |||||| |||||||||||||||||||| ||| ||||||||||    
T  14385144 gtttacatgaaatcttcaaatttaatctatgtagttataatatttttaaaattaaaaatata 14385205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 465
Target Start/End: Original strand, 16813640 - 16813749
Alignment:
Q  356 tcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattc-ttcaatttaatatatgtagttataatattttttaaac 454  Q
    |||| |||| || |||| |||||||||||| ||  |||||||| ||| ||||| |||||||| || |||||||| ||||| ||||  |||||||| |||     
T  16813640 tccttatttgaaaaactaaaaaattgtattggaggagagttttggagggtttatataaattctttaaatttaatctatgttgtta-catatttttaaaat 16813738  T
Q  455 taaaaatatag 465  Q
    |||||||||||    
T  16813739 taaaaatatag 16813749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 465
Target Start/End: Original strand, 16852919 - 16853028
Alignment:
Q  356 tcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattc-ttcaatttaatatatgtagttataatattttttaaac 454  Q
    |||| |||| || |||| |||||||||||| ||  |||||||| ||| ||||| |||||||| || |||||||| ||||| ||||  |||||||| |||     
T  16852919 tccttatttgaaaaactaaaaaattgtattggaggagagttttggagggtttatataaattctttaaatttaatctatgttgtta-catatttttaaaat 16853017  T
Q  455 taaaaatatag 465  Q
    |||||||||||    
T  16853018 taaaaatatag 16853028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 423
Target Start/End: Complemental strand, 37183333 - 37183251
Alignment:
Q  341 cataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaat 423  Q
    |||||||||||||  | ||||||| ||| |||||||||||||||| || || | |||| ||| ||||| || |||||||||||    
T  37183333 cataatacaaaatttttctcattttaaggactcaaaaattgtattggagaaaatttttcgagggtttatatgaattcttcaat 37183251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 11522197 - 11522136
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || |||||||||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  11522197 gtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatata 11522136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 465
Target Start/End: Complemental strand, 36641983 - 36641930
Alignment:
Q  413 aattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||||||||| |||||||| ||| |||||||||||||| ||| |||||||||||    
T  36641983 aattcttcaaatttaatatgtgttgttataatatttttaaaattaaaaatatag 36641930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 42946741 - 42946680
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| ||||||||||||| |||||||||||| |||||| |||| || ||| ||||||||||    
T  42946741 gtttatataaattcttcaaatttaatatatgttgttatactattcttaaaattaaaaatata 42946680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 464
Target Start/End: Complemental strand, 19389908 - 19389784
Alignment:
Q  341 cataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtta 439  Q
    |||||||||||||| |||||||||   ||||| |||||||||||| ||  ||  |||| ||| |||||||| |||||||||| |||||| ||||||||||    
T  19389908 cataatacaaaatcctcctcatttggggaactaaaaaattgtattggaggaggattttggagggtttacatgaattcttcaaatttaatctatgtagtta 19389809  T
Q  440 taatattttttaaactaaaaatata 464  Q
    |||||||||| ||| ||||||||||    
T  19389808 taatatttttaaaattaaaaatata 19389784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 464
Target Start/End: Complemental strand, 13294064 - 13293940
Alignment:
Q  341 cataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtta 439  Q
    |||||||||||||| |||||||||||  |||| |||||||||||| ||  || || || ||| ||||| ||  ||||||||| |||||| | ||| ||||    
T  13294064 cataatacaaaatcctcctcatttaagaaacttaaaaattgtattggaggagggtcttggagggtttatatgtattcttcaagtttaatctctgttgtta 13293965  T
Q  440 taatattttttaaactaaaaatata 464  Q
    |||||||||| |||  |||||||||    
T  13293964 taatatttttaaaataaaaaatata 13293940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 465
Target Start/End: Original strand, 10437977 - 10438102
Alignment:
Q  342 ataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtta 439  Q
    ||||||||||||| |||||||||| || |||| |||| ||||||| ||  || ||||| ||| ||| | || |||||||||| |||||| ||||| | ||    
T  10437977 ataatacaaaatcctcctcatttagaggaactaaaaagttgtattggaggagggttttggagggttaatatcaattcttcaaatttaatctatgttgcta 10438076  T
Q  440 taatattttttaaactaaaaatatag 465  Q
    || ||||||| ||| |||||||||||    
T  10438077 tactatttttaaaattaaaaatatag 10438102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 29799701 - 29799762
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||||| ||| ||||||||||    
T  29799701 gtttatataaattcttcaaatttaatatatgttattataatatttttaaaattaaaaatata 29799762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 12063985 - 12063942
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||    
T  12063985 aatttaatatatgttgttataatatttttaaaattaaaaatata 12063942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 17668160 - 17668090
Alignment:
Q  395 ttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||| ||| |||||||| |||||||||| |||||| ||||||||||||||||| || ||| | ||||||||    
T  17668160 ttttggagggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaattgaaaatata 17668090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 464
Target Start/End: Complemental strand, 1935115 - 1935063
Alignment:
Q  413 aattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  1935115 aattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatata 1935063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 2679885 - 2679841
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||||||| ||||| |||||||||||||| ||| |||||||||||    
T  2679885 aatttaatctatgttgttataatatttttaaaattaaaaatatag 2679841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 464
Target Start/End: Complemental strand, 5088878 - 5088826
Alignment:
Q  413 aattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||| |||||| ||||||||||||||||| || ||| ||||||||||    
T  5088878 aattcttcaaatttaatttatgtagttataatattcttaaaattaaaaatata 5088826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 464
Target Start/End: Original strand, 6632701 - 6632773
Alignment:
Q  392 gagttttagagtgtttacataaattcttcaatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||| |||| ||||| || |||| ||||| |||||||||||  |||||||||| || ||| ||||||||||    
T  6632701 gagtttgagagggtttatatgaattattcaaattaatatatgttattataatattcttaaaattaaaaatata 6632773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 463
Target Start/End: Original strand, 41923186 - 41923282
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatat 463  Q
    ||||| || ||||||| ||||| ||| ||||  || ||||| || |||||||||| |||||| ||||| |||||||||||||| | | |||||||||    
T  41923186 gaactaaacaattgtactagaagagaattttgaagggtttatatgaattcttcaaatttaatctatgttgttataatatttttaagattaaaaatat 41923282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 446
Target Start/End: Original strand, 13380530 - 13380638
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag--aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagt 437  Q
    ||||||| ||||||||||||||||   |  ||||||||||||||||| ||| || ||||| ||| ||||||||||||||||| |||||||| ||||||||    
T  13380530 cataatataaaatcatcctcatttggggggaactcaaaaattgtattggaagagggttttggagcgtttacataaattcttcaaatttaatctatgtagt 13380629  T
Q  438 tataatatt 446  Q
    |||||||||    
T  13380630 tataatatt 13380638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 368 - 465
Target Start/End: Complemental strand, 20820593 - 20820495
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    ||||| |||||||||||| ||  ||||||||||||  |||| || |||| ||||| |||||||||||| |||||| ||||||| ||| |||||||||||    
T  20820593 gaactaaaaaattgtattggatgagagttttagaggatttatatgaatttttcaaatttaatatatgttgttatattatttttaaaattaaaaatatag 20820495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 462
Target Start/End: Complemental strand, 32719467 - 32719344
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtt 438  Q
    |||||||||||| | |||||||||  || |||| |||||||||||| ||  || ||||| ||| ||| | |  |||||||||| |||||| ||||| |||    
T  32719467 cataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgtt 32719368  T
Q  439 ataatattttttaaactaaaaata 462  Q
    ||||||||||| ||| ||||||||    
T  32719367 ataatatttttaaaattaaaaata 32719344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 20381883 - 20381822
Alignment:
Q  404 gtttacataaattcttcaattt-aatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || ||||||||||||| ||||||||| ||||||||||| || ||| ||||||||||    
T  20381883 gtttatatgaattcttcaattttaatatatgttgttataatattcttaaaattaaaaatata 20381822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 34557225 - 34557128
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||||||||| || ||  ||| ||||  || |||||||| |||||||||| ||||||  ||||| ||||||||||||| ||  ||||||||||    
T  34557225 gaactcaaaaattgttttggaggagaattttgaagcgtttacatgaattcttcaaatttaatcaatgtatttataatatttttaaagttaaaaatata 34557128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 464
Target Start/End: Original strand, 26713862 - 26713978
Alignment:
Q  349 aaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagttataatattt 447  Q
    |||||| |||||||||   |||||||||||||||||| ||  || ||||| ||| ||||| || |||||||| |||||| | ||||| |||||| ||||     
T  26713862 aaaatcctcctcatttggggaactcaaaaattgtattggaggagggttttggagggtttatatgaattcttcaaatttattctatgttgttatattattc 26713961  T
Q  448 tttaaactaaaaatata 464  Q
    || | | ||||||||||    
T  26713962 ttaatattaaaaatata 26713978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 3239 - 3348
Alignment:
Q  341 cataatacaaaatcatcctcatttaaagaactcaaaa-attgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtt 438  Q
    |||||||||||||| |||||||||   ||||| |||| ||||||||||| ||||||||||||| ||||| |  |||||||||| |||||| ||||| |||    
T  3239 cataatacaaaatcctcctcatttggggaacttaaaaaattgtattagagaagagttttagagggtttatacgaattcttcaattttaatctatgttgtt 3338  T
Q  439 ataatatttt 448  Q
    ||||||||||    
T  3339 ataatatttt 3348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 342 - 445
Target Start/End: Complemental strand, 69028 - 68925
Alignment:
Q  342 ataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaatttaatatatgtagttata 441  Q
    ||||||||||||| | |  |||| | |||| ||||||||||||||||  |||||||| |   |||||||| ||||||||||||||||||||||| |||||    
T  69028 ataatacaaaatctttcaaattttaggaacacaaaaattgtattagaggagagtttttggaggtttacatgaattcttcaatttaatatatgtaattata 68929  T
Q  442 atat 445  Q
    ||||    
T  68928 atat 68925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 465
Target Start/End: Complemental strand, 28848852 - 28848754
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||||||||||||||||| ||  || ||||| ||  |||||||| |||||||||| |||||| || ||||||||||||||||| ||| |||||||||||    
T  28848852 gaactcaaaaattgtattggaggagggttttggatggtttacatgaattcttcaaatttaatctaagtagttataatatttttaaaattaaaaatatag 28848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 465
Target Start/End: Original strand, 50226056 - 50226156
Alignment:
Q  366 aagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||| |||||||||||| ||  || ||||| ||| ||||| || |||||||| |||||||| ||||| |||||| ||||||| ||| ||||||||||    
T  50226056 aagaactaaaaaattgtattggaggagcgtttttgagggtttatatgaattcttctaatttaatctatgttgttatattatttttaaaattaaaaatata 50226155  T
Q  465 g 465  Q
    |    
T  50226156 g 50226156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 33643686 - 33643740
Alignment:
Q  393 agttttagagtgtttacataaattcttc-aatttaatatatgtagttataatatt 446  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||    
T  33643686 agttttagagggtttacataaattcttcaaatttaatttatgtagtgataatatt 33643740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 464
Target Start/End: Original strand, 40243388 - 40243488
Alignment:
Q  367 agaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc---aatttaatatatgtagttataatattttttaaactaaaaatat 463  Q
    |||||| |||| || ||||||| |||||||| |||| ||||| |||||||||||   ||| |||| ||||| ||||||||||| || ||| |||||||||    
T  40243388 agaactaaaaagttatattagagaagagtttgagagagtttatataaattcttcaaaaatataatctatgttgttataatattcttaaaattaaaaatat 40243487  T
Q  464 a 464  Q
    |    
T  40243488 a 40243488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 41432779 - 41432718
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||| |||||||||| |||||| ||||||||||||||||| || ||| ||||||||||    
T  41432779 gtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaattaaaaatata 41432718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 464
Target Start/End: Original strand, 50476528 - 50476653
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaattt-aatatatgtagtt 438  Q
    ||||||||||||||  |||||||| | | ||||||||||||||||| ||  || ||||| ||| ||||| || |||| || ||||| ||| ||||| |||    
T  50476528 cataatacaaaatccccctcatttgagggaactcaaaaattgtattggaggagggttttcgagggtttatatgaattttttaatttcaatctatgttgtt 50476627  T
Q  439 ataatattttttaaactaaaaatata 464  Q
    |||||||| || ||| ||||||||||    
T  50476628 ataatattcttaaaattaaaaatata 50476653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 32287662 - 32287706
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||||||||||||| | |||||||||||| |||||||||||||||    
T  32287662 aatttaatatatgttgatataatatttttaaaactaaaaatatag 32287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 465
Target Start/End: Original strand, 33324657 - 33324749
Alignment:
Q  374 aaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||||||||||||||  || ||||||||| ||||| || |||||||| ||||||||  |||| |||||| ||||||| ||| ||||| |||||    
T  33324657 aaaaattgtattagaggagggttttagagggtttatatgaattcttcaaatttaatcaatgttgttatattatttttaaaattaaaattatag 33324749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 464
Target Start/End: Complemental strand, 9315066 - 9315011
Alignment:
Q  409 cataaattcttcaatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||||| ||||| ||||||||||||||||| || ||| | ||||||||    
T  9315066 cataaattcttcaaattaatctatgtagttataatattcttaaaatttaaaatata 9315011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 9861316 - 9861273
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||    
T  9861316 aatttaatatatgttgttataatatttttaaaattaaaaatata 9861273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 15426325 - 15426249
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaatttaatatatgtagttataatatt 446  Q
    |||||||||||||||||| || ||||||||| | | |||||||| |||| |  |||||||| |||||| ||||||||||    
T  15426325 gaactcaaaaattgtattggagaagagttttggggggtttacatgaattgt--aatttaatttatgtatttataatatt 15426249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 464
Target Start/End: Complemental strand, 39886950 - 39886880
Alignment:
Q  395 ttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||| ||| ||||| || |||||||||| |||||| ||||| |||||| ||||||| ||||||||||||||    
T  39886950 ttttggagagtttatatgaattcttcaaatttaatctatgttgttatattatttttaaaactaaaaatata 39886880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 20712233 - 20712172
Alignment:
Q  404 gtttacataaattcttcaattt-aatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| ||||||||||||| || ||| ||||| |||||||||||||| ||| ||||||||||    
T  20712233 gtttatataaattcttcaaattcaatctatgttgttataatatttttaaaattaaaaatata 20712172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 462
Target Start/End: Complemental strand, 34750014 - 34749973
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaata 462  Q
    |||||||| |||||||||||||||||||| ||| ||||||||    
T  34750014 aatttaatttatgtagttataatatttttaaaattaaaaata 34749973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 52073511 - 52073414
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaattt-aatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||||||| ||||  || ||||| ||| ||||| || |||| ||||| || ||| || |||||||||||||| || ||| ||||||||||    
T  52073511 gaactcaaaaattgtactagaggagggttttggagggtttagatgaatttttcaaattcaatctaagtagttataatattcttaaaattaaaaatata 52073414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 368 - 464
Target Start/End: Original strand, 16424165 - 16424263
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagtttt-agagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| |||||||||||||||  ||  |||| |||| ||||| || |||||||||| |||||||||||||||||||||||| || ||| ||||||||||    
T  16424165 gaactaaaaaattgtattagaggaggattttgagagggtttatatgaattcttcaaatttaatatatgtagttataatattcttaaaattaaaaatata 16424263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 27085412 - 27085473
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || |||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  27085412 gtttatatgaattcttcaaatttaatatatgttgttataatattttttaaattaaaaatata 27085473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 3393974 - 3394054
Alignment:
Q  342 ataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa 422  Q
    ||||||||||||| |||||||||| |||||||||||||| |||| ||  ||||||||  |  |||||||| ||||||||||    
T  3393974 ataatacaaaatcctcctcatttagagaactcaaaaattatattggaggagagtttttcaaggtttacatcaattcttcaa 3394054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 41866179 - 41866082
Alignment:
Q  369 aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||| |||||||||||| ||  || |||||  || ||||| ||||||||||||| |||||| ||||| |||||| ||||||| ||| |||||||||||    
T  41866179 aactaaaaaattgtattggaggagggttttgaagggtttatataaattcttcaaatttaatctatgttgttatattatttttaaaattaaaaatatag 41866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 1839847 - 1839776
Alignment:
Q  394 gttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||| |||| ||||| || |||||||||| |||||||||||| |||||||||||||| ||| |||| |||||    
T  1839847 gtttaagagggtttatatgaattcttcaaatttaatatatgttgttataatatttttaaaattaaacatata 1839776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 10878809 - 10878738
Alignment:
Q  394 gttttagagtgtttacataaattcttca-atttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||| |||| ||||| || | ||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  10878809 gtttgagagggtttatatgagttcttcacatttaatatatgttgttataatatttttaaaattaaaaatata 10878738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 462
Target Start/End: Complemental strand, 26772733 - 26772610
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtt 438  Q
    |||||||||||| | || |||||| ||| |||| |||||||||||| ||  || ||||| ||| ||| | |  |||||||||| |||||| ||||| |||    
T  26772733 cataatacaaaaccctcatcatttgaaggaactaaaaaattgtattggatgagggttttggagggttaataagaattcttcaaatttaatttatgttgtt 26772634  T
Q  439 ataatattttttaaactaaaaata 462  Q
    ||||||||||| ||| ||||||||    
T  26772633 ataatatttttaaaattaaaaata 26772610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 28517259 - 28517216
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||||||||||||||||| || ||| ||||||||||    
T  28517259 aatttaatatatgtagttataatattcttaaaattaaaaatata 28517216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 32188 - 32278
Alignment:
Q  375 aaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||||||||  |||||||| ||  ||||| || |||||||| ||| |||| ||||| ||||||||||| || ||| ||||||||||    
T  32188 aaaattgtattagaggagagtttttgacggtttatatgaattcttcaaatgtaatttatgttgttataatattcttaaaattaaaaatata 32278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 41455323 - 41455384
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || |||||||||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  41455323 gtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatata 41455384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 32158850 - 32158890
Alignment:
Q  424 ttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||||| |||||||||||||| ||| ||||||||||    
T  32158850 ttaatatatgttgttataatatttttaaaattaaaaatata 32158890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 341 - 464
Target Start/End: Original strand, 516054 - 516180
Alignment:
Q  341 cataatacaaaatcatcctcatttaaagaa-ctcaaaaattgtattagaaaagagttttagagtgtttacataa-attcttcaa-tttaatatatgtagt 437  Q
    |||||||||||||  |||||||| | |||| |||||||||||||| |||  |||||||| ||  |||||||| | ||| ||||| ||| |||||||||||    
T  516054 cataatacaaaattctcctcattcagagaaactcaaaaattgtataagatgagagttttggatggtttacatgatattattcaaatttcatatatgtagt 516153  T
Q  438 tataatattttttaaactaaaaatata 464  Q
    | |||||||||| ||| ||||||||||    
T  516154 tgtaatatttttaaaattaaaaatata 516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 464
Target Start/End: Complemental strand, 24683046 - 24682952
Alignment:
Q  371 ctcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||||||||| ||  || ||||||||| |||| ||| |||||||||| |||||| || ||||||||||||||||| |||  |||||||||    
T  24683046 ctcaaaaattgtatttgaggagggttttagagggtttgcatgaattcttcaaatttaatctaggtagttataatatttttaaaataaaaaatata 24682952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 52430592 - 52430531
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || |||||||||| |||||||||||| |||||||||||||| ||| ||||||||||    
T  52430592 gtttatatgaattcttcaaatttaatatatgttgttataatatttttaaaattaaaaatata 52430531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 462
Target Start/End: Complemental strand, 29114324 - 29114201
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtt 438  Q
    |||||||||||| | |||||||||  || |||| |||||||||||| ||  || ||||| ||| ||| | |  |||||||||| |||||| ||||| |||    
T  29114324 cataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgtt 29114225  T
Q  439 ataatattttttaaactaaaaata 462  Q
    ||||||||||| ||| ||||||||    
T  29114224 ataatatttttaaaattaaaaata 29114201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 465
Target Start/End: Original strand, 368130 - 368183
Alignment:
Q  413 aattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||||||||| |||||| ||||| |||||||||||||| ||| |||||||||||    
T  368130 aattcttcaaatttaatttatgttgttataatatttttaaaattaaaaatatag 368183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 24662764 - 24662707
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaa 460  Q
    |||||||| |||| ||||| ||||||| ||||||||||||||||||| ||| ||||||    
T  24662764 gtttacatgaatttttcaaatttaatacatgtagttataatatttttaaaattaaaaa 24662707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 37662707 - 37662768
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || |||||||||| ||||||||||||  ||||||||||||| ||| ||||||||||    
T  37662707 gtttagatgaattcttcaaatttaatatatgttcttataatatttttaaaattaaaaatata 37662768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 464
Target Start/End: Original strand, 47063710 - 47063807
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| |||||||||||| ||| ||  ||| |||| |||||  | |||||||||| |||||||||||| ||||| ||||| || ||| ||||||||||    
T  47063710 gaactaaaaaattgtattggaagaggatttgagagggtttatgtgaattcttcaaatttaatatatgttgttattatattcttaaaattaaaaatata 47063807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 464
Target Start/End: Original strand, 28880064 - 28880116
Alignment:
Q  413 aattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  28880064 aattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatata 28880116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 43167088 - 43167048
Alignment:
Q  424 ttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||||| |||||||||||||| ||| ||||||||||    
T  43167088 ttaatatatgttgttataatatttttaaaattaaaaatata 43167048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 464
Target Start/End: Original strand, 48620362 - 48620414
Alignment:
Q  413 aattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  48620362 aattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatata 48620414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 356 - 465
Target Start/End: Original strand, 49183701 - 49183811
Alignment:
Q  356 tcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagttataatattttttaaac 454  Q
    |||||||||  |||||| |||||||||||||||  || ||||| ||| ||||| || |||||||| |||||||| ||||| |||||| ||||||| |||     
T  49183701 tcctcatttggagaactaaaaaattgtattagaggagggttttggagggtttatatgaattcttcaaatttaatctatgttgttatattatttttaaaat 49183800  T
Q  455 taaaaatatag 465  Q
     ||||||||||    
T  49183801 aaaaaatatag 49183811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 1132988 - 1132891
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattc-ttcaatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||||||||| ||  || ||||| ||| |||||||| ||||| || |||||||| ||||||||| ||||||| || ||| ||||||||||    
T  1132988 gaactcaaaaattgtattggaggagggttttggagggtttacatgaattctttaaatttaatctatgtagttgtaatattcttaaaattaaaaatata 1132891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 7302138 - 7302209
Alignment:
Q  394 gttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||| || |||||||| |||||||||| |||||| ||| ||||||||||||| || ||||||||||||||    
T  7302138 gttttaaagagtttacatgaattcttcaaatttaatctatatagttataatattcttaaaactaaaaatata 7302209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 46891451 - 46891511
Alignment:
Q  405 tttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  46891451 tttatataaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatata 46891511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 464
Target Start/End: Complemental strand, 52620915 - 52620791
Alignment:
Q  342 ataatacaaaatcatcctcatttaa-agaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtta 439  Q
    ||||||| ||||| |||||||||   ||||||||||||||||||| ||  || |||||   | ||| | || |||||||||| |||||||||||| ||||    
T  52620915 ataataccaaatcctcctcatttgggagaactcaaaaattgtattggaggagggttttgaggggttaatatgaattcttcaaatttaatatatgttgtta 52620816  T
Q  440 taatattttttaaactaaaaatata 464  Q
    |||||||||| |||  |||||||||    
T  52620815 taatatttttaaaataaaaaatata 52620791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 4247171 - 4247242
Alignment:
Q  394 gttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||  |||||||| |||||||||| |||||| ||| ||||||||||||| || ||| ||||||||||    
T  4247171 gttttagatagtttacatgaattcttcaaatttaatctatttagttataatattcttaaaattaaaaatata 4247242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 11500155 - 11500222
Alignment:
Q  394 gttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaa 460  Q
    ||||| ||| |||||||| |||||||||| |||||||||||| ||||||||||| || ||| ||||||    
T  11500155 gttttggagagtttacattaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaa 11500222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 32858884 - 32858955
Alignment:
Q  394 gttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| ||| |||||||| ||||| |||| |||||| ||||||||||||||||| || ||| ||||||||||    
T  32858884 gttttggagggtttacatgaattcatcaaatttaatctatgtagttataatattcttaaaattaaaaatata 32858955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 462
Target Start/End: Original strand, 38639579 - 38639702
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtt 438  Q
    |||||||||||| | |||||||||  || |||| |||||||||||| ||  || ||||| ||| ||| | |  |||||||||| |||||| ||||| |||    
T  38639579 cataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgtt 38639678  T
Q  439 ataatattttttaaactaaaaata 462  Q
    ||||||||||| ||| ||||||||    
T  38639679 ataatatttttaaaattaaaaata 38639702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 39966877 - 39966834
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||    
T  39966877 aatttaatatatgttgttataatatttttaaaattaaaaatata 39966834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 464
Target Start/End: Original strand, 50201639 - 50201690
Alignment:
Q  413 aattcttcaatttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||| ||||||||||  ||||||||||| || ||||||||||||||    
T  50201639 aattcttcaaattaatatatggtgttataatattcttaaaactaaaaatata 50201690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 462
Target Start/End: Complemental strand, 53664690 - 53664567
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtt 438  Q
    |||||||||||| | |||||||||  || |||| |||||||||||| ||  || ||||| ||| ||| | |  |||||||||| |||||| ||||| |||    
T  53664690 cataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttcgagggttaataagaattcttcaaatttaatttatgttgtt 53664591  T
Q  439 ataatattttttaaactaaaaata 462  Q
    ||||||||||| ||| ||||||||    
T  53664590 ataatatttttaaaattaaaaata 53664567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 15499316 - 15499255
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||| || ||| | ||||||||    
T  15499316 gtttacataaatttttcaaatttaatctatgtagttataatattcttaaaatttaaaatata 15499255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 27922025 - 27922086
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||| |||||||||| |||||| ||||| |||||||||||||  ||| ||||||||||    
T  27922025 gtttacatgaattcttcaaatttaatttatgttgttataatattttaaaaattaaaaatata 27922086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 29623300 - 29623361
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || |||||||||| |||||||||||| |||||||||||||| | | ||||||||||    
T  29623300 gtttatatgaattcttcaaatttaatatatgttgttataatatttttaatattaaaaatata 29623361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 35283151 - 35283212
Alignment:
Q  404 gtttacataaattcttca-atttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||| || ||| ||||||||||    
T  35283151 gtttatatgaattcttcatatttaatatatgttgttataatattcttaaaattaaaaatata 35283212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 443
Target Start/End: Original strand, 37457031 - 37457107
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagttataat 443  Q
    ||||||||| ||| |||||||  | | ||||||||  ||||||| |||||||| |||||||| ||||||||||||||    
T  37457031 gaactcaaagattctattagatgacatttttagaggatttacatgaattcttcgaatttaatctatgtagttataat 37457107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 446
Target Start/End: Complemental strand, 39856454 - 39856349
Alignment:
Q  342 ataatacaaaatcatcctcatttaaagaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttc-aatttaatatatgtagttat 440  Q
    |||||||||||||||||||||||    |||| |||| ||||||| ||  ||||||||||| |||||| || |||||||| |||||| |||| || |||||    
T  39856454 ataatacaaaatcatcctcatttcggaaactaaaaagttgtattggatgagagttttagaatgtttatatgaattcttcaaatttattatacgttgttat 39856355  T
Q  441 aatatt 446  Q
    ||||||    
T  39856354 aatatt 39856349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 43348292 - 43348195
Alignment:
Q  368 gaactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| |||||||||||||||  || ||||| ||| ||| | || |||||||||| |||||| ||||| |||||||||||||| ||| ||||||||||    
T  43348292 gaactaaaaaattgtattagaggagggttttggagggttaatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatata 43348195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 465
Target Start/End: Complemental strand, 38505390 - 38505299
Alignment:
Q  375 aaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    ||||||||||| ||  || ||||| ||| ||||| || |||||||||| |||||| ||||| |||||||||||||| ||| |||||||||||    
T  38505390 aaaattgtattggaggagggttttggagggtttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatatag 38505299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 21687497 - 21687558
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||| ||||||||||||| ||||||||| || |||||||||||||| ||| ||||||||||    
T  21687497 gtttatataaattcttcaaatttaatataagttgttataatatttttaaaattaaaaatata 21687558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 7347907 - 7347843
Alignment:
Q  401 agtgtttacataaattcttcaat-ttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    ||||||||||| ||||||||||  || || |||||||||||||||||||| ||| ||||||||||    
T  7347907 agtgtttacatgaattcttcaaagtttatctatgtagttataatatttttaaaattaaaaatata 7347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 1277992 - 1278063
Alignment:
Q  394 gttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||| |||| ||||| || |||||||||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  1277992 gtttgagagggtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatata 1278063  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 33872146 - 33872075
Alignment:
Q  395 ttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||| ||| ||||| || |||||||||| |||||| ||||| |||||| ||||||||||| |||||||||||    
T  33872146 ttttggagggtttatatgaattcttcaaatttaatctatgttgttatattattttttaaattaaaaatatag 33872075  T

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Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 462
Target Start/End: Complemental strand, 45940491 - 45940368
Alignment:
Q  341 cataatacaaaatcatcctcatttaaag-aactcaaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagtt 438  Q
    |||||||||||| | |||||||||  || |||| |||||||||||| ||  |||||||| ||| ||| | |  |||||||||| |||||| ||||| | |    
T  45940491 cataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagtagagttttggagggttaataagaattcttcaaatttaatttatgttgct 45940392  T
Q  439 ataatattttttaaactaaaaata 462  Q
    ||||||||||| ||| ||||||||    
T  45940391 ataatatttttaaaattaaaaata 45940368  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 13044211 - 13044273
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    ||||| || |||||||||| |||||||||||| |||||| ||||||| ||| |||||||||||    
T  13044211 gtttatatgaattcttcaaatttaatatatgttgttatattatttttaaaattaaaaatatag 13044273  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 14676285 - 14676355
Alignment:
Q  395 ttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||| ||| |||||||| |||||||||| |||||| ||||||||||||||||| || ||| | ||||||||    
T  14676285 ttttggagggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaattgaaaatata 14676355  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 4788000 - 4787959
Alignment:
Q  423 tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||||| |||||||||||||| ||| ||||||||||    
T  4788000 tttaatatatgttgttataatatttttaaaattaaaaatata 4787959  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 35264891 - 35264847
Alignment:
Q  421 aatttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||||||| ||||| |||||||||||||| ||| |||||||||||    
T  35264891 aatttaatttatgttgttataatatttttaaaattaaaaatatag 35264847  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 464
Target Start/End: Original strand, 43741768 - 43741820
Alignment:
Q  413 aattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatata 464  Q
    |||||||||| |||||| |||||| ||||||||||||| ||| ||||||||||    
T  43741768 aattcttcaaatttaatttatgtaattataatatttttaaaattaaaaatata 43741820  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 37176 - 37247
Alignment:
Q  395 ttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    |||| ||| ||||| || |||||||||| |||||||||||| |||||| ||||||| ||| |||||||||||    
T  37176 ttttggagggtttatatgaattcttcaaatttaatatatgttgttatattatttttaaaattaaaaatatag 37247  T

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Target: scaffold0263 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 12276 - 12214
Alignment:
Q  404 gtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatatag 465  Q
    ||||| || |||||||||| |||||| ||||| |||||||||||||| ||| |||||||||||    
T  12276 gtttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatatag 12214  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 463
Target Start/End: Complemental strand, 90932 - 90842
Alignment:
Q  374 aaaaattgtattagaaaagagttttagagtgtttacataaattcttcaa-tttaatatatgtagttataatattttttaaactaaaaatat 463  Q
    |||||||||||| ||  || ||||| ||  ||||| || |||||||||| |||||| ||||| |||||||||||||| ||| |||||||||    
T  90932 aaaaattgtattggaggagggttttggatggtttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatat 90842  T

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