View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18021_high_26 (Length: 352)
Name: NF18021_high_26
Description: NF18021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18021_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 43091878 - 43092211
Alignment:
| Q |
1 |
atgcaaacttttacataaaactggagataatataagacatgtaaagtttgcagaattttacttttccataataagagaaaatataagttgcattaatgta |
100 |
Q |
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| T |
43091878 |
atgcaaacttttacataaaactggagataatataagacatgtaaagtttgcagaattttacttttccataataagagaaaatataagttgcattaatgta |
43091977 |
T |
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| Q |
101 |
gaagatatttgtcatctcacatacaaagggaagcttagataaaatgtttgttgttatgaagttggtgaaatgattatcccaagaacaaatttataggaat |
200 |
Q |
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| T |
43091978 |
gaagatatttgtcatctcacatacaaagggaagcttaggtaaaatgtttgttgttatgaagttggcgaaatgattatctcaagaacaaatttataggaat |
43092077 |
T |
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| Q |
201 |
aagaatatgcatttatgtaacacttttccctgtgttgttagcaacatattcatcgttaaaaataatttcataagattgaacatcactgcacacacacgaa |
300 |
Q |
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| T |
43092078 |
aagaatatgcatttatgtaacacttttccctgtgttgttagcaacatattcatcgttaaaaataaattcataagattgaacatcactgcacacacacgaa |
43092177 |
T |
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| Q |
301 |
agcacaactgataaaatatcggccattttaaaaa |
334 |
Q |
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| T |
43092178 |
aacacaactgacaaaatatcggccattttaaaaa |
43092211 |
T |
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