View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18021_low_16 (Length: 409)
Name: NF18021_low_16
Description: NF18021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18021_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 33494898 - 33494660
Alignment:
| Q |
1 |
tagtttttgtctcctaaagtgatttctacactcaaatctattgtttaactcattcttatatatgataagacctaaacataaatcatttacctaactttac |
100 |
Q |
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| T |
33494898 |
tagtttttgtctcctaaagtgatttctacactcaaatctattgtttaactcattcttatatatgataagacctaaacataaatcatttacctaactttac |
33494799 |
T |
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| Q |
101 |
ttttaatctaaatcaaaatcaatttcctccaaaaccaaacatacactgacaaaattaacacacgtattgatcaaagatggaaaagaaatgtaaacttaca |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33494798 |
ttttaatctaaataaaaatcaatttcctccaaaaccaaacatacactgacaaaattaacacacgtattgatcaaagatggaaaagaaatgtaaacttaca |
33494699 |
T |
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| Q |
201 |
caannnnnnnnatatagtaaacaacttacgctttctgtgttg |
242 |
Q |
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||| ||||||||||||||||||||||||||||||| |
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| T |
33494698 |
caa---tttttatatagtaaacaacttacgctttctgtgttg |
33494660 |
T |
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