View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18022_low_6 (Length: 293)

Name: NF18022_low_6
Description: NF18022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18022_low_6
NF18022_low_6
[»] chr2 (39 HSPs)
chr2 (19-293)||(30712579-30712854)
chr2 (19-141)||(13829313-13829435)
chr2 (21-141)||(6896044-6896163)
chr2 (23-138)||(40692182-40692298)
chr2 (23-138)||(3913557-3913672)
chr2 (23-137)||(16104152-16104267)
chr2 (23-138)||(2085949-2086065)
chr2 (23-138)||(5278931-5279047)
chr2 (23-138)||(18685713-18685829)
chr2 (19-138)||(19513782-19513902)
chr2 (26-138)||(27462900-27463012)
chr2 (23-138)||(30326428-30326544)
chr2 (23-138)||(32497792-32497908)
chr2 (23-138)||(33366487-33366603)
chr2 (23-138)||(34338687-34338803)
chr2 (23-138)||(35114662-35114778)
chr2 (23-138)||(39461191-39461307)
chr2 (23-133)||(9733027-9733138)
chr2 (38-141)||(16062188-16062291)
chr2 (34-138)||(37308533-37308638)
chr2 (23-138)||(4641393-4641509)
chr2 (23-138)||(18793358-18793474)
chr2 (23-138)||(26418800-26418916)
chr2 (23-131)||(28824654-28824762)
chr2 (23-71)||(32766602-32766650)
chr2 (19-138)||(42365454-42365574)
chr2 (23-138)||(11114750-11114865)
chr2 (34-136)||(16177989-16178091)
chr2 (34-138)||(38993179-38993280)
chr2 (23-138)||(17540591-17540707)
chr2 (19-94)||(33889164-33889240)
chr2 (230-281)||(19494377-19494428)
chr2 (51-138)||(26981816-26981902)
chr2 (26-84)||(20907521-20907579)
chr2 (19-57)||(38623393-38623431)
chr2 (97-138)||(33889135-33889176)
chr2 (23-138)||(37003965-37004082)
chr2 (34-138)||(42706235-42706340)
chr2 (23-111)||(1247060-1247148)
[»] chr1 (48 HSPs)
chr1 (21-141)||(6029471-6029591)
chr1 (19-122)||(15540058-15540161)
chr1 (23-141)||(11772804-11772922)
chr1 (23-141)||(31004016-31004134)
chr1 (23-138)||(24339809-24339925)
chr1 (23-138)||(42510411-42510527)
chr1 (23-138)||(10384254-10384369)
chr1 (23-141)||(25539739-25539857)
chr1 (36-138)||(38087181-38087283)
chr1 (23-138)||(844896-845012)
chr1 (23-138)||(7183804-7183920)
chr1 (23-141)||(38663016-38663134)
chr1 (23-141)||(50304535-50304653)
chr1 (19-138)||(1351603-1351722)
chr1 (19-143)||(6144154-6144278)
chr1 (23-138)||(12890124-12890240)
chr1 (23-138)||(51703334-51703450)
chr1 (39-138)||(26764978-26765077)
chr1 (23-138)||(39281781-39281896)
chr1 (23-138)||(16386740-16386856)
chr1 (23-138)||(16451013-16451129)
chr1 (23-138)||(17327821-17327937)
chr1 (23-138)||(17887833-17887949)
chr1 (23-138)||(41972798-41972914)
chr1 (23-138)||(16476327-16476442)
chr1 (19-147)||(50540221-50540350)
chr1 (23-94)||(26118387-26118459)
chr1 (19-138)||(32270244-32270359)
chr1 (23-138)||(41968021-41968137)
chr1 (23-138)||(46154786-46154902)
chr1 (34-141)||(8838822-8838929)
chr1 (23-116)||(6711218-6711312)
chr1 (23-138)||(28340475-28340591)
chr1 (23-138)||(35387483-35387599)
chr1 (23-141)||(42512942-42513057)
chr1 (23-138)||(44738213-44738329)
chr1 (19-91)||(45658755-45658827)
chr1 (23-138)||(51264381-51264497)
chr1 (23-138)||(21071616-21071726)
chr1 (26-138)||(1601054-1601172)
chr1 (19-80)||(13994242-13994304)
chr1 (97-138)||(3415101-3415142)
chr1 (97-138)||(34663828-34663869)
chr1 (19-56)||(50382571-50382608)
chr1 (50-138)||(5109617-5109705)
chr1 (23-63)||(16437324-16437364)
chr1 (23-94)||(30105852-30105924)
chr1 (23-138)||(45491047-45491163)
[»] chr7 (49 HSPs)
chr7 (19-138)||(329352-329471)
chr7 (19-136)||(48445405-48445522)
chr7 (14-138)||(41211290-41211415)
chr7 (23-138)||(21784752-21784868)
chr7 (23-138)||(10932655-10932771)
chr7 (19-138)||(18470565-18470685)
chr7 (23-138)||(32873867-32873983)
chr7 (23-138)||(36769667-36769783)
chr7 (19-137)||(22724126-22724244)
chr7 (19-141)||(34295498-34295620)
chr7 (14-138)||(26994314-26994439)
chr7 (39-135)||(11822116-11822212)
chr7 (23-138)||(30599106-30599222)
chr7 (23-138)||(30849344-30849460)
chr7 (23-138)||(9913407-9913522)
chr7 (23-138)||(9927095-9927210)
chr7 (23-138)||(48894599-48894714)
chr7 (19-133)||(22724625-22724739)
chr7 (25-137)||(3892126-3892239)
chr7 (23-138)||(3922801-3922917)
chr7 (23-138)||(12982184-12982300)
chr7 (23-138)||(46633578-46633694)
chr7 (23-141)||(43368080-43368198)
chr7 (19-83)||(11250558-11250623)
chr7 (19-84)||(16028018-16028082)
chr7 (23-138)||(11321983-11322099)
chr7 (23-138)||(18386406-18386522)
chr7 (22-138)||(41665672-41665788)
chr7 (23-130)||(47947649-47947757)
chr7 (23-130)||(47953079-47953187)
chr7 (34-93)||(14608501-14608560)
chr7 (13-138)||(1870015-1870141)
chr7 (26-84)||(15035354-15035412)
chr7 (12-138)||(37966856-37966982)
chr7 (23-71)||(1363586-1363634)
chr7 (26-138)||(23349392-23349504)
chr7 (23-91)||(26652795-26652863)
chr7 (23-94)||(40753080-40753152)
chr7 (23-91)||(43214023-43214091)
chr7 (23-132)||(26371907-26372017)
chr7 (88-138)||(34117354-34117404)
chr7 (97-138)||(16962993-16963034)
chr7 (19-84)||(29455940-29456005)
chr7 (23-80)||(34117392-34117449)
chr7 (97-138)||(40753051-40753092)
chr7 (73-138)||(43189392-43189457)
chr7 (23-80)||(46448742-46448799)
chr7 (23-138)||(43158784-43158900)
chr7 (97-141)||(46448801-46448845)
[»] chr4 (49 HSPs)
chr4 (21-141)||(3649514-3649634)
chr4 (19-139)||(22318470-22318590)
chr4 (23-138)||(9807037-9807152)
chr4 (34-141)||(50729627-50729734)
chr4 (19-84)||(39078596-39078661)
chr4 (19-138)||(20802617-20802737)
chr4 (23-138)||(21579906-21580022)
chr4 (19-138)||(53200730-53200854)
chr4 (19-137)||(30942670-30942788)
chr4 (21-98)||(26083259-26083336)
chr4 (34-122)||(7001751-7001839)
chr4 (23-138)||(21202620-21202736)
chr4 (23-138)||(37865633-37865749)
chr4 (23-138)||(7555047-7555162)
chr4 (19-138)||(29592781-29592895)
chr4 (23-141)||(55065423-55065541)
chr4 (34-138)||(52319206-52319311)
chr4 (23-138)||(24002218-24002334)
chr4 (23-138)||(43640979-43641095)
chr4 (23-138)||(49152189-49152305)
chr4 (23-138)||(2786845-2786960)
chr4 (23-136)||(50186411-50186524)
chr4 (23-138)||(14296477-14296593)
chr4 (23-138)||(23521760-23521876)
chr4 (23-138)||(37931801-37931916)
chr4 (23-138)||(50178583-50178698)
chr4 (23-136)||(33177122-33177236)
chr4 (23-141)||(37695631-37695749)
chr4 (14-114)||(6776482-6776583)
chr4 (23-140)||(52949600-52949716)
chr4 (23-138)||(14314725-14314841)
chr4 (23-138)||(29785627-29785743)
chr4 (23-94)||(33552932-33553004)
chr4 (23-91)||(44324432-44324500)
chr4 (19-138)||(56154501-56154621)
chr4 (23-84)||(24210252-24210314)
chr4 (15-60)||(41711806-41711851)
chr4 (23-138)||(34929795-34929911)
chr4 (23-94)||(53343567-53343639)
chr4 (14-61)||(10184870-10184917)
chr4 (19-138)||(13110209-13110327)
chr4 (23-109)||(20518112-20518199)
chr4 (25-138)||(12600766-12600880)
chr4 (23-141)||(47642581-47642699)
chr4 (97-138)||(46680655-46680696)
chr4 (23-94)||(29616094-29616166)
chr4 (23-59)||(32858283-32858319)
chr4 (97-141)||(36497109-36497153)
chr4 (23-94)||(47361499-47361571)
[»] chr5 (28 HSPs)
chr5 (22-141)||(37148676-37148795)
chr5 (21-141)||(18470529-18470649)
chr5 (23-141)||(4689801-4689919)
chr5 (14-138)||(4818234-4818359)
chr5 (23-143)||(5673016-5673137)
chr5 (26-138)||(2351557-2351670)
chr5 (23-139)||(7770382-7770498)
chr5 (23-138)||(8136716-8136832)
chr5 (23-138)||(32528592-32528708)
chr5 (23-138)||(35701154-35701270)
chr5 (23-138)||(7725912-7726027)
chr5 (23-137)||(34794765-34794880)
chr5 (23-141)||(3735232-3735350)
chr5 (23-138)||(41790565-41790681)
chr5 (36-138)||(20119648-20119750)
chr5 (23-138)||(24036110-24036223)
chr5 (23-138)||(40182341-40182457)
chr5 (51-138)||(7523048-7523135)
chr5 (19-93)||(31770690-31770765)
chr5 (19-141)||(31644322-31644443)
chr5 (34-138)||(11963218-11963323)
chr5 (23-94)||(24181727-24181799)
chr5 (23-94)||(29241299-29241371)
chr5 (22-141)||(32093083-32093200)
chr5 (23-61)||(14011549-14011587)
chr5 (23-83)||(5571745-5571806)
chr5 (97-138)||(24181787-24181828)
chr5 (29-113)||(35954916-35955000)
[»] scaffold0050 (1 HSPs)
scaffold0050 (19-141)||(43048-43170)
[»] scaffold0280 (1 HSPs)
scaffold0280 (21-141)||(13788-13908)
[»] chr8 (37 HSPs)
chr8 (19-141)||(15001341-15001464)
chr8 (21-112)||(29611165-29611256)
chr8 (19-138)||(35225540-35225659)
chr8 (23-141)||(37618504-37618622)
chr8 (19-138)||(8673163-8673283)
chr8 (23-141)||(40388915-40389033)
chr8 (23-138)||(31513695-31513811)
chr8 (23-138)||(34101385-34101501)
chr8 (23-138)||(45113933-45114048)
chr8 (23-138)||(13407047-13407163)
chr8 (19-138)||(32303693-32303813)
chr8 (23-138)||(45446332-45446448)
chr8 (23-141)||(30501020-30501138)
chr8 (23-138)||(32020113-32020229)
chr8 (23-138)||(41709654-41709770)
chr8 (51-138)||(17805567-17805654)
chr8 (23-141)||(22999132-22999250)
chr8 (23-138)||(29672435-29672551)
chr8 (23-138)||(34063005-34063121)
chr8 (23-113)||(5968976-5969067)
chr8 (14-141)||(10656789-10656918)
chr8 (23-138)||(3251768-3251884)
chr8 (23-138)||(6386453-6386569)
chr8 (19-138)||(27103836-27103956)
chr8 (23-138)||(29563338-29563454)
chr8 (34-139)||(4599539-4599644)
chr8 (34-127)||(6460152-6460245)
chr8 (23-94)||(30543134-30543206)
chr8 (23-138)||(31731941-31732057)
chr8 (23-142)||(37474593-37474712)
chr8 (23-93)||(7591559-7591629)
chr8 (23-93)||(41548541-41548611)
chr8 (34-71)||(9624182-9624219)
chr8 (19-60)||(16485917-16485958)
chr8 (14-138)||(25478125-25478245)
chr8 (23-94)||(14005156-14005228)
chr8 (19-94)||(37664391-37664467)
[»] chr3 (36 HSPs)
chr3 (19-137)||(3867736-3867849)
chr3 (23-141)||(51925299-51925417)
chr3 (23-138)||(5442169-5442285)
chr3 (23-138)||(28675668-28675784)
chr3 (23-138)||(4851547-4851663)
chr3 (23-138)||(25860512-25860628)
chr3 (19-138)||(51259867-51259987)
chr3 (23-138)||(31883113-31883228)
chr3 (19-138)||(3864761-3864881)
chr3 (23-141)||(33364869-33364987)
chr3 (23-138)||(1344798-1344914)
chr3 (34-138)||(22484845-22484949)
chr3 (23-138)||(26282478-26282594)
chr3 (23-138)||(53557886-53558002)
chr3 (23-141)||(10747093-10747211)
chr3 (23-136)||(12349262-12349376)
chr3 (23-137)||(50386547-50386661)
chr3 (23-138)||(2134948-2135064)
chr3 (23-94)||(34026589-34026661)
chr3 (23-138)||(43175447-43175563)
chr3 (23-138)||(53046732-53046848)
chr3 (34-138)||(21373818-21373914)
chr3 (23-138)||(39052929-39053046)
chr3 (19-142)||(3964163-3964287)
chr3 (23-138)||(21221451-21221567)
chr3 (23-77)||(28625010-28625064)
chr3 (19-61)||(44267698-44267740)
chr3 (75-141)||(52300356-52300421)
chr3 (97-138)||(3695438-3695479)
chr3 (97-138)||(20609799-20609840)
chr3 (97-138)||(34026560-34026601)
chr3 (24-84)||(40094435-40094496)
chr3 (35-71)||(26847271-26847307)
chr3 (23-138)||(29584753-29584869)
chr3 (34-138)||(29645944-29646048)
chr3 (23-138)||(47958523-47958639)
[»] scaffold0025 (1 HSPs)
scaffold0025 (23-141)||(5543-5661)
[»] chr6 (29 HSPs)
chr6 (23-141)||(17867709-17867828)
chr6 (23-141)||(17877492-17877611)
chr6 (19-137)||(18597290-18597408)
chr6 (23-138)||(10959878-10959993)
chr6 (23-138)||(17443140-17443255)
chr6 (23-138)||(29814742-29814858)
chr6 (23-138)||(14925592-14925707)
chr6 (23-138)||(18057397-18057512)
chr6 (23-138)||(23636101-23636216)
chr6 (51-138)||(28502336-28502423)
chr6 (23-138)||(2614773-2614889)
chr6 (24-143)||(11212129-11212249)
chr6 (23-138)||(15277073-15277189)
chr6 (23-138)||(24203240-24203356)
chr6 (51-138)||(4494263-4494350)
chr6 (23-137)||(32409988-32410103)
chr6 (23-141)||(10485033-10485150)
chr6 (23-141)||(31870236-31870354)
chr6 (60-138)||(34684159-34684237)
chr6 (23-138)||(3932943-3933059)
chr6 (23-138)||(14808136-14808251)
chr6 (32-80)||(5650849-5650897)
chr6 (23-93)||(32132516-32132587)
chr6 (51-138)||(32805355-32805442)
chr6 (68-138)||(11381970-11382040)
chr6 (34-84)||(32614085-32614135)
chr6 (19-94)||(167055-167131)
chr6 (34-70)||(7396270-7396306)
chr6 (19-135)||(29054239-29054354)
[»] scaffold0650 (1 HSPs)
scaffold0650 (20-141)||(1743-1864)
[»] scaffold0054 (1 HSPs)
scaffold0054 (23-138)||(23454-23570)
[»] scaffold0729 (1 HSPs)
scaffold0729 (14-114)||(4673-4774)
[»] scaffold0208 (1 HSPs)
scaffold0208 (23-138)||(2441-2557)
[»] scaffold0098 (1 HSPs)
scaffold0098 (23-138)||(51316-51432)
[»] scaffold0027 (1 HSPs)
scaffold0027 (23-138)||(15049-15165)
[»] scaffold0014 (1 HSPs)
scaffold0014 (14-138)||(101826-101951)
[»] scaffold0169 (2 HSPs)
scaffold0169 (23-138)||(12639-12755)
scaffold0169 (23-138)||(18157-18273)


Alignment Details
Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 30712854 - 30712579
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||| | ||||||||||||||||||| ||||||||| |    
T  30712854 atcatataaaacaaaaaattattcaataccataaaaatttgtcctttgctgttatgcgctgtgttgtgttgttctgcattgtactgttctgtccagtact 30712755  T
Q  119 tacttttttgcaaaccaaacgcattctaagttgcaagttagcaaattacacccacttannnnnnnnnact-aaaaaacccatttgtca-ttactcaactt 216  Q
    ||||||||| |||||||||| ||| |||| ||||||||||||||  |||||||||||          ||| ||||||||||||||||| |||||||||||    
T  30712754 tacttttttacaaaccaaacacatcctaaattgcaagttagcaagctacacccactt-gttttttttactaaaaaaacccatttgtcatttactcaactt 30712656  T
Q  217 aattaaattgaagggtaagtttgtgattttctttaatctttttccgttgctaacaaaacaaatgtcgtactatcctc 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  30712655 aattaaattgaagggtaagtttgtgattttctttaatctttttcctttgctaacaaaacaaatgtcgcactatcctc 30712579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 13829435 - 13829313
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||| ||||||||||||| ||||||||||||| || || |||| |||||||||||| |||||||||| ||||||||||||||||| || |    
T  13829435 atcatataaaacaaaaaattattcaatatcataaaaatttgttctgtgatgttctgccttgtgttgtgctgttctgctttgtactgttttgtccaataat 13829336  T
Q  119 tacttttttgcaaaccaaacgca 141  Q
    |||| ||||||||||||||||||    
T  13829335 tactgttttgcaaaccaaacgca 13829313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 6896163 - 6896044
Alignment:
Q  21 catataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattta 120  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||||| ||||||| |||  |||| |||    
T  6896163 catataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgccttgtgttgtgttgttctgcattatactgttctgt-tagtactta 6896065  T
Q  121 cttttttgcaaaccaaacgca 141  Q
    || ||||||||||||||||||    
T  6896064 ctgttttgcaaaccaaacgca 6896044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 40692298 - 40692182
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| ||||||||| |||||||| || |||| ||||||||||||  |||||||   |||||||||| |||| |||||||||    
T  40692298 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttatgtctagtatttac 40692199  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||||| |||||    
T  40692198 tgttttgcaaatcaaac 40692182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 3913557 - 3913672
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| | |||||||||| |||||||||||| |||| ||||||| |||||||||||| | |||||||  || ||||||| | || ||||||||||    
T  3913557 tataaaacaaaatattattcaatgccataaaaatttatcctatgttgttctgccttgtgttgtgttgttctgtcttatactgttctatcaagtatttact 3913656  T
Q  123 tttttgcaaaccaaac 138  Q
     ||||||||| |||||    
T  3913657 gttttgcaaatcaaac 3913672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 16104267 - 16104152
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||| ||| ||||||| ||||||||||||  |||||||   |||||||||||||||||||| ||      
T  16104267 tataaaacaaaaaattactcaatgccataaaaaatttgccctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgt 16104168  T
Q  122 ttttttgcaaaccaaa 137  Q
    | ||||||||||||||    
T  16104167 tgttttgcaaaccaaa 16104152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 2086065 - 2085949
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| |||||  |||||||| |||||| | ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  2086065 tataaaacaaaaaattactcaatggcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 2085966  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  2085965 tgttttgcaaaccaaac 2085949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 5278931 - 5279047
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||||||||||||   ||||||   |||||||||| |||| |||| ||||    
T  5278931 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtcaagtacttac 5279030  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  5279031 tgttttgcaaaccaaac 5279047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 18685829 - 18685713
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| || |||||||||  |||||||   |||||||||| ||||||||| || |    
T  18685829 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 18685730  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  18685729 tgttttgcaaaccaaac 18685713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 19513782 - 19513902
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||  || |||| || ||| | |||  |||||||   |||||||||||| |||||||     
T  19513782 atcatataaaacaaaaaattactcaataccataaaaaatttgtcccgtgctgttctgtcttctattgtactgttctatcttgtactgttttatccagtac 19513881  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    ||||| |||||||||||||||    
T  19513882 ttactgttttgcaaaccaaac 19513902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 27462900 - 27463012
Alignment:
Q  26 aaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttactttt 125  Q
    ||||||| ||||||||||||  |||| ||||||||| | ||||||| | |||||||||| |||||||||  ||| |||||||| |||| || || || ||    
T  27462900 aaaacaaaaaattattcaatgtcatataaatttgtcatgtgttgttctaccttgtgttgtgctgttctgttttgcactgttttatccaatacttgctgtt 27462999  T
Q  126 ttgcaaaccaaac 138  Q
    |||||||||||||    
T  27463000 ttgcaaaccaaac 27463012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 30326428 - 30326544
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||||| ||||| || |||| ||||||||||||  | |||||   |||||||||| ||||||||| || |    
T  30326428 tataaaacaaaaaattactcaattccataaaaattttgtcctgtgctgttctgccttgtgttgtacggttctatcttgtactgttctgtccagtacttgc 30326527  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  30326528 tcttttgcaaaccaaac 30326544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 32497908 - 32497792
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| |||||| |||||  |||||||   ||||| |||| ||||||||| ||||    
T  32497908 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtattgttctgtccagtacttac 32497809  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  32497808 tgttttgcaaaccaaac 32497792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 33366603 - 33366487
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| ||||||||| |||||||| || |||| || |||||||||  |||||||   ||||| |||| ||||||||| || |    
T  33366603 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgacttgtgttgtactgttctatcttgtattgttctgtccagtacttgc 33366504  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  33366503 tgttttgcaaaccaaac 33366487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 34338803 - 34338687
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||||| ||||| || |||| ||||||||||||  |||||||   |||||||||| ||||||||| ||      
T  34338803 tataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgt 34338704  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  34338703 tgttttgcaaaccaaac 34338687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 35114778 - 35114662
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||| | ||||||||| |||||||| ||  ||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  35114778 tataaaacaaaaaattactcattgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 35114679  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  35114678 tgttttgcaaaccaaac 35114662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 39461307 - 39461191
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    ||||||| || |||||| ||||| ||||||||| |||||| | || |||| ||||||||||||  |||||||   ||||| |||| ||||||||| ||||    
T  39461307 tataaaataaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtattgttatgtccagtacttac 39461208  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  39461207 tgttttgcaaaccaaac 39461191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 9733027 - 9733138
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| |||||||| ||||||||| ||  ||| ||||||||||||  |||||||   || ||||||| ||||||||| || |    
T  9733027 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgc 9733126  T
Q  122 ttttttgcaaac 133  Q
    | ||||||||||    
T  9733127 tgttttgcaaac 9733138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 16062188 - 16062291
Alignment:
Q  38 tattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaa 137  Q
    ||||||||||||||||||||||| || ||||||| || ||| ||||| | |||| ||  ||||||||||||||| | || ||||| ||||||| | ||||    
T  16062188 tattcaataccataaaaatttgttctgtgttgttctgtcttatgttgtgttgttatgtcttgtactgttttgtcaaatagttactgttttgcagatcaaa 16062287  T
Q  138 cgca 141  Q
    ||||    
T  16062288 cgca 16062291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 37308638 - 37308533
Alignment:
Q  34 aaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaa 132  Q
    |||||| ||||| ||||||||| |||||| | ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| ||  | |||||||||    
T  37308638 aaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaa 37308539  T
Q  133 ccaaac 138  Q
    ||||||    
T  37308538 ccaaac 37308533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 4641509 - 4641393
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| |||||   ||||||| |||||||| ||||||| |||||| |||||  |||||||  ||| ||||||| ||||||||| || |    
T  4641509 tataaaacaaaaaattactcaatggtataaaaaatttgtcctgtgttgttctgccttatgttgtactgttctatattttactgttctgtccagtacttgc 4641410  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||||| |||||    
T  4641409 tgttttgcaaagcaaac 4641393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 18793358 - 18793474
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| | |||| |||||  |||||||   || ||||||||||||||||| |||     
T  18793358 tataaaacaaaaaattactcaatcccataaaaaatttgtcttgtgatgttctaccttatgttgtactgttctattttatactgttttgtccagtacttat 18793457  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  18793458 tattttgcaaaccaaac 18793474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 26418916 - 26418800
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||| | |||||||| ||| ||| | ||||||| ||||||| |||| |||||||||  ||| |||||| |||| | || ||||    
T  26418916 tataaaacaaaaaattactcattgccataaaatttttgtcatgtgttgttctgccttgcgttgtgctgttctgtcttgcactgttctgtcaaatacttac 26418817  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  26418816 tgttttgcaaaccaaac 26418800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 28824654 - 28824762
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| || |||||| ||  |||||||||||||| | | ||||| || ||| ||||| |||||||||  ||||||||||  |||||||| |||||    
T  28824654 tataaaacaaaaatttattccatgtcataaaaatttgtcatgtattgttctgtcttatgttgtgctgttctgtcttgtactgttcagtccagtacttact 28824753  T
Q  123 tttttgcaa 131  Q
     ||||||||    
T  28824754 gttttgcaa 28824762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 32766602 - 32766650
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgtt 71  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  32766602 tataaaacaaaaaattattcaatgccataaaaatttgtcctgtgttgtt 32766650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 42365574 - 42365454
Alignment:
Q  19 atcatataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| |||| |||||||| || | ||||||| ||||||||||||  |||||||   || |  |||||| |||| ||     
T  42365574 atcatataaaacaaaaaattactcaatgccataaaaaatttatcttgtgttgttctgccttgtgttgtactgttctatcttatgttgttttttccaatac 42365475  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    ||||| |||||||||||||||    
T  42365474 ttactgttttgcaaaccaaac 42365454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 11114865 - 11114750
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||| | |||||||||||| |||||||||||| || | | ||||| || ||||||||| | |||||||  ||||||  || |||  |||| |||||    
T  11114865 tataaaacgaaaaattattcaatgccataaaaatttttcttatattgttctgtcttgtgttgtgttgttctgtcttgtacaattatgtttagtacttact 11114766  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  11114765 gttttgcaaaccaaac 11114750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 16177989 - 16178091
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||||||| | ||||||||||||| | ||||||| |  ||||||||| | || | ||  ||| |||||| ||||||||| ||||| ||||||||||    
T  16177989 aaattattcaatgctataaaaatttgtcgtgtgttgttctatcttgtgttgtgttgatatgtcttgcactgttctgtccagtacttactgttttgcaaac 16178088  T
Q  134 caa 136  Q
    |||    
T  16178089 caa 16178091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 38993179 - 38993280
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||||||||||||||   |||||| | ||||||| |||||| ||||| ||||| ||   || || |||| ||||||||| ||||| ||||||||||    
T  38993179 aaattattcaataccataa---tttgtcttgtgttgttctgccttatgttgtgctgtcctatcttatattgttctgtccagtacttactattttgcaaac 38993275  T
Q  134 caaac 138  Q
    |||||    
T  38993276 caaac 38993280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 17540707 - 17540591
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatt-tgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| | |||| | || |||| ||||||||||||  |||||||   || ||||||| | ||||||| || |    
T  17540707 tataaaacaaaaaattactcaatgccataaaaaatatgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctatccagtacttgc 17540608  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  17540607 tgttttgcaaaccaaac 17540591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 33889240 - 33889164
Alignment:
Q  19 atcatataaaacaagaaattattcaataccata-aaaatttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||||||| |||||| ||||||||||| |||||||||  | || |||| ||||||||||||  ||||||||    
T  33889240 atcatataaaacaaaaaattactcaataccataaaaaatttgttatgtgctgttctgccttgtgttgtactgttctg 33889164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 19494377 - 19494428
Alignment:
Q  230 ggtaagtttgtgattttctttaatctttttccgttgctaacaaaacaaatgt 281  Q
    ||||||||||| | |||| ||||| ||||||||||||||| |||||||||||    
T  19494377 ggtaagtttgtaaatttcattaatgtttttccgttgctaagaaaacaaatgt 19494428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 26981816 - 26981902
Alignment:
Q  51 aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||| |||| || |||| |||||||||||| |||||| ||  |||||||||| ||||||||| ||| ||  |||||||||||||    
T  26981816 aaaaatttatcctgtgctgttctgccttgtgttgtgctgttttgtcttgtactgttctgtccagtactta-ttgcttgcaaaccaaac 26981902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 20907579 - 20907521
Alignment:
Q  26 aaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttg 84  Q
    ||||||| ||||||||||||  |||||||||||||| | ||||||| | ||||||||||    
T  20907579 aaaacaaaaaattattcaatgacataaaaatttgtcatatgttgttctcccttgtgttg 20907521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 38623393 - 38623431
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatt 57  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  38623393 atcatataaaacaaaaaattattcaatatcataaaaatt 38623431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 33889176 - 33889135
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  33889176 ttgtactgttctgtccagtacttactgttttgcaaaccaaac 33889135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 37003965 - 37004082
Alignment:
Q  23 tataaaacaagaaattattcaataccat-aaaaatttgtcctt-tgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattta 120  Q
    ||||||| || |||||||||||| |||| |||||||||||||| || |||| | |||||| |||  |||||||   || ||||||| |||| |||| ||     
T  37003965 tataaaataaaaaattattcaatgccataaaaaatttgtccttgtgctgttttaccttgtattgtactgttctatcttatactgttctgtctagtacttg 37004064  T
Q  121 cttttttgcaaaccaaac 138  Q
    || |||||||||||||||    
T  37004065 ctgttttgcaaaccaaac 37004082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 42706340 - 42706235
Alignment:
Q  34 aaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaa 132  Q
    |||||| ||||| ||||||||| |||||||| || |||| || |||||||||   ||||||   |||||||||| |||| |||  ||||| |||||||||    
T  42706340 aaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtattgttctatcttgtactgttatgtcaagtgcttactgttttgcaaa 42706241  T
Q  133 ccaaac 138  Q
    ||||||    
T  42706240 ccaaac 42706235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 1247148 - 1247060
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtc 111  Q
    ||||||| || |||||||||||| ||||||||||||||| | |  |||  ||| |||||||| | |||||||  |||||||||| ||||    
T  1247148 tataaaataaaaaattattcaatgccataaaaatttgtcttgtactgtactgctttgtgttgtgttgttctgtcttgtactgttatgtc 1247060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 6e-43; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 6029471 - 6029591
Alignment:
Q  21 catataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattta 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||  ||||||||| |||    
T  6029471 catataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgctgtccagtactta 6029570  T
Q  121 cttttttgcaaaccaaacgca 141  Q
    || ||||||||||||||||||    
T  6029571 ctattttgcaaaccaaacgca 6029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 15540058 - 15540161
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||| |||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |    
T  15540058 atcatataaaacaaaaaattattcaataccataaaaacttgtcatgtgttgttatgccttgtgttgtgctgttctgcattgtactgttctgtccagtact 15540157  T
Q  119 tact 122  Q
    ||||    
T  15540158 tact 15540161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 11772804 - 11772922
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||| |||||| |||||||||||||||||| || | || |||||||||||| | |||| ||  |||||||||| ||||||||| ||||     
T  11772804 tataaaacaaaaaataattcaaaaccataaaaatttgtcctgtgctattctgccttgtgttgtgttgttatgtcttgtactgttatgtccagtacttacc 11772903  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  11772904 gttttgcaaaccaaacgca 11772922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 31004134 - 31004016
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| ||||||||||||||||| || |||| | |||||| ||| ||||||||   |||||||||| ||| ||||| || ||    
T  31004134 tataaaacaaaaaattattcaatgccataaaaatttgtcctgtgatgttctcccttgtattgcgctgttctttcttgtactgttctgtacagtacttgct 31004035  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  31004034 gttttgcaaaccaaacgca 31004016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 24339809 - 24339925
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| |||||||| ||||||||| || |||| ||||||||||||  |||||||   |||||||||| |||||||||||| |    
T  24339809 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtatttgc 24339908  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||| |||||||    
T  24339909 tgttttgcagaccaaac 24339925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 42510527 - 42510411
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| ||||||||| |||||||| || |||| ||||||||||||  |||||||   |||||||||| ||||||||| ||||    
T  42510527 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttac 42510428  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||||| |||||    
T  42510427 tgttttgcaaatcaaac 42510411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 10384369 - 10384254
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| | ||||||| ||||||  ||||||| |||| ||||||| ||||||| |  |||||||||| || |||||| |||||    
T  10384369 tataaaacaaaaaattattcaatgcaataaaaaattgtccagtgttgttttgccctgtgttgtgctgttcggtcttgtactgttatgcccagtacttact 10384270  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  10384269 gttttgcaaaccaaac 10384254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 25539857 - 25539739
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||  ||||||||||||||||| || | || ||||||||||||   |||| ||  |||||||||| ||||||||| ||||     
T  25539857 tataaaacaaaaaattattcaaagccataaaaatttgtcctgtgctattctgccttgtgttgtattgttatgtcttgtactgttatgtccagtacttacc 25539758  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  25539757 gttttgcaaaccaaacgca 25539739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 38087181 - 38087283
Alignment:
Q  36 attattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaacca 135  Q
    |||||||||| ||||||||||||||||| || |||| |||||| |||||  ||||||||  |||||||||| ||||||||| ||| | ||||||||||||    
T  38087181 attattcaatgccataaaaatttgtcctgtgctgttctgccttatgttgtactgttctgtcttgtactgttatgtccagtacttaatgttttgcaaacca 38087280  T
Q  136 aac 138  Q
    |||    
T  38087281 aac 38087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 844896 - 845012
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  844896 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 844995  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  844996 tgttttgcaaaccaaac 845012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 7183920 - 7183804
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| | ||||| || |||||||||  |||||||   |||||||||| ||||||||| ||||    
T  7183920 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtattgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttac 7183821  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  7183820 tgttttgcaaaccaaac 7183804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 38663134 - 38663016
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| ||||||| | |||| | ||| | ||||||   |||||||||||||| | ||| || ||    
T  38663134 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttctcccttatattgtgttgttctttcttgtactgttttgtactgtacttgct 38663035  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  38663034 gttttgcaaaccaaacgca 38663016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 50304653 - 50304535
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| | |||||| ||| ||||||||   |||||||||| ||| | ||| || ||    
T  50304653 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgct 50304554  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  50304553 gttttgcaaaccaaacgca 50304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 1351603 - 1351722
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||| | ||||| |||||||| ||||||| | ||||||| ||||||||||||  |||||||   |||||||||| |||| ||||     
T  1351603 atcatataaaacaaaaaat-actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtcaagtac 1351701  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    ||||| |||||||||||||||    
T  1351702 ttactgttttgcaaaccaaac 1351722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 6144154 - 6144278
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||  |||||||||||||||||||||||||||| | || |||| |||||| ||||| | ||  ||   |||||||||| ||| ||||  |    
T  6144154 atcatataaaacagaaaattattcaataccataaaaatttgtcttgtgatgttctgccttatgttgtgttgccctatcttgtactgttctgttcagtgat 6144253  T
Q  119 tacttttttgcaaaccaaacgcatt 143  Q
    |||| ||||||||||||||| ||||    
T  6144254 tactgttttgcaaaccaaacacatt 6144278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 12890240 - 12890124
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| ||| |||| || |||| ||||||||||||  |||||||   |||||||||| |||| |||| ||||    
T  12890240 tataaaacaaaaaattactcaatgccataaaaaatttatcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttac 12890141  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  12890140 tattttgcaaaccaaac 12890124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 51703334 - 51703450
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | | ||||| ||||||||||||  ||||| |   |||||||||||||||||||| || |    
T  51703334 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtattgttttgccttgtgttgttctgttatatcttgtactgttttgtccagtacttgc 51703433  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  51703434 tgttttgcaaaccaaac 51703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 138
Target Start/End: Original strand, 26764978 - 26765077
Alignment:
Q  39 attcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    ||||||| | ||||||||||||||| | ||||| |||||||||||| | ||||||   |||||||||| ||||||||| ||||| ||||||||| |||||    
T  26764978 attcaatgctataaaaatttgtcctatattgttctgccttgtgttgtgttgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaac 26765077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 39281896 - 39281781
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||  ||||||||||||  |||| ||| ||||| | ||||||||||| |||||||| ||||||||   || |||| || ||||||||| |||||    
T  39281896 tataaaacataaaattattcaatgtcatacaaagttgtcatgtgttgttatgcattgtgttgtgctgttctatcttatactattctgtccagtacttact 39281797  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  39281796 gttttgcaaaccaaac 39281781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 16386856 - 16386740
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| |||||||| |||  |||||||   |||||||||| |||||| || || |    
T  16386856 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtattgtactgttctatcttgtactgttctgtccaatacttgc 16386757  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  16386756 tgttttgcaaaccaaac 16386740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 16451129 - 16451013
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || | || |||| |||||||  || ||||   |||||||||| ||||||||| ||||    
T  16451129 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctattctgccatgtgttgtactattctatcttgtactgttctgtccagtacttac 16451030  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  16451029 tgttttgcaaaccaaac 16451013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 17327821 - 17327937
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||  |||||||| ||||||||| ||||||| |||||||| |||  |||||||   || ||||||| |||||| || ||||    
T  17327821 tataaaacaacaaattactcaacgccataaaaaatttgtcctatgttgttctgccttgtattgtactgttctatcttatactgttctgtccaatacttac 17327920  T
Q  122 ttttttgcaaaccaaac 138  Q
    ||||||||||| |||||    
T  17327921 ttttttgcaaatcaaac 17327937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 17887949 - 17887833
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | ||||||| ||||||||||||   ||||||   ||||||| || ||||| ||| ||||    
T  17887949 tataaaacaacaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactattctgtcccgtacttac 17887850  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  17887849 tgttttgcaaaccaaac 17887833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 41972914 - 41972798
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| | ||| ||||||||| |||||| | || |||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  41972914 tataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 41972815  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  41972814 tgttttgcaaaccaaac 41972798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 16476327 - 16476442
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||  |||||||||||| ||||| ||||||||| | || ||||||||||| ||| | | ||||||   || || |||| ||||||||| |||||    
T  16476327 tataaaacataaaattattcaatgccatacaaatttgtcatgtggtgttatgccttatgtcgtgttgttctatcttatattgttatgtccagtacttact 16476426  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  16476427 gttttgcaaaccaaac 16476442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 50540350 - 50540221
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| ||||||||| |||| ||| || |||| || | |||||||  |||||||   || ||||||| |||| ||||     
T  50540350 atcatataaaacaacaaattactcaatgccataaaaaatttgccctgtgctgttctgacgtgtgttgtactgttctatcttatactgttctgtcaagtac 50540251  T
Q  118 ttacttttttgcaaaccaaacgcattctaa 147  Q
    ||||| ||||||||||||||| || |||||    
T  50540250 ttactgttttgcaaaccaaacacactctaa 50540221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 26118387 - 26118459
Alignment:
Q  23 tataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||||||||| |||| ||||||||||||| || |||| ||||||||||||  ||||||||    
T  26118387 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctg 26118459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 32270359 - 32270244
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| ||||||||| |||||||| |  |||     |||||||||  |||||||   ||||||||||||||||||||     
T  32270359 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcctattctgt-----cttgtgttgtactgttctatcttgtactgttttgtccagtac 32270265  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    || || |||||||||||||||    
T  32270264 ttgctgttttgcaaaccaaac 32270244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 41968021 - 41968137
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||| |  ||||||| ||||||| | | |||||  ||||||||||| | |||||||  |||||||||| ||||||| | ||||    
T  41968021 tataaaacaaaaaattactcattgtcataaaaaatttgtcatgtattgttccgccttgtgttgtgttgttctgtcttgtactgttctgtccagcacttac 41968120  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  41968121 tgttttgcaaaccaaac 41968137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 46154902 - 46154786
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| ||||||||||||  |||||||| |||||| | ||  |||||| ||||||||   |||||||   || ||||||||||||||||| ||||    
T  46154902 tataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgccgttatgtcttgtgttatactgttctatcttatactgttttgtccagtacttac 46154803  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||| ||||    
T  46154802 tgttttgcaaactaaac 46154786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 8838929 - 8838822
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||||||| | ||||||||||||  | |||| || |  ||||||||| | |||||||  || ||| ||| |||| |||||||||| ||||||||||    
T  8838929 aaattattcaatgctataaaaatttgttatgtgtttttctatcttgtgttgtgttgttctgtcttatacagttatgtctagtatttactgttttgcaaac 8838830  T
Q  134 caaacgca 141  Q
    ||||||||    
T  8838829 caaacgca 8838822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 6711218 - 6711312
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagta 116  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| ||||||||||||  |||||||   |||||||||| |||||||||    
T  6711218 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttgtgttgtactgttctattttgtactgttctgtccagta 6711312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 28340475 - 28340591
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaat-ttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||  ||||| | |  |||| ||||||||||||  |||||||   |||||||||| |||||| || ||||    
T  28340475 tataaaacaaaaaattactcaatgccataaaaaaattgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttac 28340574  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||| |||||||||    
T  28340575 tgttttgtaaaccaaac 28340591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 35387483 - 35387599
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| | ||||||||||  |||||||   ||||| | || ||||||||| || |    
T  35387483 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctaccttgtgttgtactgttctatcttgtattattatgtccagtacttgc 35387582  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  35387583 tgttttgcaaaccaaac 35387599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 42512942 - 42513057
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||   ||||||||||||||| || |||| | |||||| ||| ||||||||   |||||||||| ||| | ||| |   |    
T  42512942 tataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtact---t 42513038  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  42513039 gttttgcaaaccaaacgca 42513057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 44738213 - 44738329
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | ||||||| | ||||||||||   ||||||   || ||||||| |||| |||| || |    
T  44738213 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtattgttctatcttctactgttctgtctagtacttgc 44738312  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  44738313 tgttttgcaaaccaaac 44738329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 45658827 - 45658755
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgtt 91  Q
    |||||||||||||| |||||||||||  ||||||||||||||| | || | || || ||||||||| ||||||    
T  45658827 atcatataaaacaaaaaattattcaaagccataaaaatttgtcatgtgctattctgtcttgtgttgtgctgtt 45658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 51264497 - 51264381
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || | || || |||||||||  |||||||   |||||||||| |||||| || || |    
T  51264497 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctattctgtcttgtgttgtactgttctatcttgtactgttctgtccaatacttgc 51264398  T
Q  122 ttttttgcaaaccaaac 138  Q
    |  ||||||||||||||    
T  51264397 tgatttgcaaaccaaac 51264381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 21071726 - 21071616
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||   ||||||||||||| | | ||||| |||||||||||| ||| |      ||||||||||| |||||||| |||||    
T  21071726 tataaaacaaaaaattattcaatgtaataaaaatttgtcatgtattgttctgccttgtgttgtgctat-----cttgtactgtttagtccagtacttact 21071632  T
Q  123 tttttgcaaaccaaac 138  Q
     |||| ||||| ||||    
T  21071631 gttttacaaacaaaac 21071616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 1601172 - 1601054
Alignment:
Q  26 aaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgt-----tctgcattgtactgttttgtccagtattt 119  Q
    ||||||| |||||| ||| | ||||||||| |||||| | ||||||| |||||||||||| | |||     |||   |||||||||||||||||||| ||    
T  1601172 aaaacaaaaaattactcattgccataaaaaatttgtcttgtgttgttctgccttgtgttgtgttgtgttgttctttcttgtactgttttgtccagtactt 1601073  T
Q  120 acttttttgcaaaccaaac 138  Q
    ||| ||||||| |||||||    
T  1601072 actgttttgcagaccaaac 1601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 13994242 - 13994304
Alignment:
Q  19 atcatataaaacaagaaattattcaataccata-aaaatttgtcctttgttgttatgccttgt 80  Q
    |||||||||||||  ||||||||||||| |||| |||||||||| | ||||||| ||||||||    
T  13994242 atcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgttgttctgccttgt 13994304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 3415101 - 3415142
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||||||||||||| ||||| |||| ||||||||||    
T  3415101 ttgtactgttttgtccagtacttactgttttacaaaccaaac 3415142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 34663869 - 34663828
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  34663869 ttgtactgttctgtccagtacttactgttttgcaaaccaaac 34663828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 50382571 - 50382608
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaat 56  Q
    |||||||||||||| | |||||||||||||||||||||    
T  50382571 atcatataaaacaaaatattattcaataccataaaaat 50382608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 5109705 - 5109617
Alignment:
Q  50 taaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||||| | || |||||||| |||||||| ||| || ||  ||||||| ||  |||||||| ||||| |||| ||||||||||    
T  5109705 taaaaatttgtcatatggtgttatgctttgtgttgcgctattttgtcttgtactcttcagtccagtacttactgttttacaaaccaaac 5109617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 16437364 - 16437324
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcct 63  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  16437364 tataaaacaaaaaattactcaatgccataaaaatttgtcct 16437324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 30105852 - 30105924
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| | ||| |||||||| ||||||||  ||||||| ||||||||||||  ||||||||    
T  30105852 tataaaacaaaaaattacttaatgccataaaaaatttgtccagtgttgttctgccttgtgttgtactgttctg 30105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 45491047 - 45491163
Alignment:
Q  23 tataaaacaagaaattattcaataccata-aaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||| |||||||||| | || |||| ||||||||||||   ||||||   || || |||| ||||||||| || |    
T  45491047 tataaaacaaaaaattactcaatgccatacaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttatattgttctgtccagtaattgc 45491146  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||| |||||||    
T  45491147 tgttttgcataccaaac 45491163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 329471 - 329352
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||| ||||||||||||||||||||| ||||||||| |    
T  329471 atcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgccttgtgttgtgctgttctgcattgtactgttctgtccagtact 329372  T
Q  119 tacttttttgcaaaccaaac 138  Q
    |||| |||||||||||||||    
T  329371 tactgttttgcaaaccaaac 329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 48445522 - 48445405
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| | |||| |||||||||||||||||||||||| |    
T  48445522 atcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgccttgtgttgtgttgttatgcattgtactgttttgtccagtact 48445423  T
Q  119 tacttttttgcaaaccaa 136  Q
    |||| | |||||||||||    
T  48445422 tactgtcttgcaaaccaa 48445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 41211290 - 41211415
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    |||| ||| |||||||||| |||||| ||||| ||||||||| |||||||| ||||||| ||||||||||||   ||||||   ||||||||||||||||    
T  41211290 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtattgttctatcttgtactgttttgtcc 41211389  T
Q  113 agtatttacttttttgcaaaccaaac 138  Q
    |||| || || |||||||||||||||    
T  41211390 agtacttgctgttttgcaaaccaaac 41211415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 21784868 - 21784752
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||  |||||| ||||| |||||||| |||||| || ||||||| ||||||||||||  |||||||   |||||||||||||||||||| ||||    
T  21784868 tataaaacataaaattactcaatgccataaaagatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttac 21784769  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  21784768 tgttttgcaaaccaaac 21784752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 10932655 - 10932771
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| |||| |||||||  |||||||   |||||||||| ||||||||| ||||    
T  10932655 tataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctgttctgccgtgtgttgtactgttctatcttgtactgttctgtccagtacttac 10932754  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  10932755 tgttttgcaaaccaaac 10932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 18470685 - 18470565
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| ||||||||| |||||| | || |||| ||||||||||||  |||||||   |||||||||| |||||||||     
T  18470685 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtac 18470586  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    || || |||||||||||||||    
T  18470585 ttgctgttttgcaaaccaaac 18470565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 32873867 - 32873983
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  32873867 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 32873966  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  32873967 tgttttgcaaaccaaac 32873983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 36769667 - 36769783
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| ||||||||||||  |||||||   |||||||||| ||||||||| ||||    
T  36769667 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttac 36769766  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  36769767 tgttttgcaaaccaaac 36769783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 22724126 - 22724244
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||| |||  ||||||||||||||||||||||||| || | ||||||| |||||| ||||| | ||| ||   || |||| |||||||| |||||    
T  22724126 atcatataatacagaaaattattcaataccataaaaatttatcttgtgttgttctgccttatgttgtgttgtcctatcttatactattttgtccggtatt 22724225  T
Q  119 tacttttttgcaaaccaaa 137  Q
    |||| ||||||||||||||    
T  22724226 tactattttgcaaaccaaa 22724244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 34295498 - 34295620
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||| ||||||||||||  |||||||||||||| | || |||| | |||||| ||| | ||||||   |||||||||||||| | ||| |    
T  34295498 atcatataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttgtactgtact 34295597  T
Q  119 tacttttttgcaaaccaaacgca 141  Q
    | || ||||||||||||||||||    
T  34295598 tgctgttttgcaaaccaaacgca 34295620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 26994314 - 26994439
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    |||| ||| |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  |||||||   |||| ||||| |||||    
T  26994314 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtcctgttctgtcc 26994413  T
Q  113 agtatttacttttttgcaaaccaaac 138  Q
    |||| || || |||||||||||||||    
T  26994414 agtactttctgttttgcaaaccaaac 26994439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 11822212 - 11822116
Alignment:
Q  39 attcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaacca 135  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||| | ||||||   || ||||||| ||| ||||| ||||| ||||||||||||    
T  11822212 attcaatgccataaaaatttgtcctatgttgttctgccttgtgttgtgttgttctattttatactgttatgttcagtacttactgttttgcaaacca 11822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 30599106 - 30599222
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| |||||  ||||||| ||||||| | ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| ||||    
T  30599106 tataaaacaacaaattactcaatttcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttac 30599205  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||| |||||||||    
T  30599206 tgttttgtaaaccaaac 30599222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 30849344 - 30849460
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaat-ttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||  ||||||| ||||||| || |||||||||  |||||||   |||||||||| |||| |||| ||||    
T  30849344 tataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgttgttctgtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttac 30849443  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  30849444 tgttttgcaaaccaaac 30849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 9913522 - 9913407
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||| | |||||||||||| ||||||||||||||| | || |||| | |||||| ||| | ||||||   |||||||||| ||| |||||||| ||    
T  9913522 tataaaactaaaaattattcaattccataaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgct 9913423  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  9913422 gttttgcaaaccaaac 9913407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 9927210 - 9927095
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||| | |||||||||||| ||||||||||||||| | || |||| | |||||| ||| | ||||||   |||||||||| ||| |||||||| ||    
T  9927210 tataaaactaaaaattattcaattccataaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgct 9927111  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  9927110 gttttgcaaaccaaac 9927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 48894714 - 48894599
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| | ||||||| ||||||  || |||| | ||||||||||  |||||| |  |||||||||| |||| | ||||||||    
T  48894714 tataaaacaaaaaattattcaatgcaataaaaaattgtccagtgctgttttaccttgtgttgtactgttcggtcttgtactgttatgtcaaatatttact 48894615  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  48894614 gttttgcaaaccaaac 48894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 22724625 - 22724739
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||| |||  |||||||||||||||| |||||||| || | ||||||| |||||| ||||| | | ||||   |||||||||| ||||||||| |    
T  22724625 atcatataatacagaaaattattcaataccagaaaaatttatcttgtgttgttctgccttatgttgtgatattctatcttgtactgttctgtccagtact 22724724  T
Q  119 tacttttttgcaaac 133  Q
    |||| ||||||||||    
T  22724725 tactattttgcaaac 22724739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 3892126 - 3892239
Alignment:
Q  25 taaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttactt 123  Q
    |||||||| |||||| ||||| |||||||| ||||||| | || |||| ||||||||||||  |||||||   || ||||||| ||||||||| |||||     
T  3892126 taaaacaaaaaattactcaatgccataaaaaatttgtcatatgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactg 3892225  T
Q  124 ttttgcaaaccaaa 137  Q
    ||||||||||||||    
T  3892226 ttttgcaaaccaaa 3892239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 3922801 - 3922917
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| ||| || ||||| ||||||||| |||||||| || |||| ||||||||||||  ||| |||   |||||||||| ||||||||| || |    
T  3922801 tataaaacaaaaaaatactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactggtctatcttgtactgttctgtccagtacttgc 3922900  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  3922901 tgttttgcaaaccaaac 3922917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 12982300 - 12982184
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||||| ||| | || |||| ||||||||||||  |||||||   |||||||||| | ||||||| || |    
T  12982300 tataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctctccagtacttgc 12982201  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  12982200 tcttttgcaaaccaaac 12982184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 46633694 - 46633578
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | ||||||| ||||||||||||  |||||||   ||||||| || |||||| || || |    
T  46633694 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtactattatgtccaatacttgc 46633595  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  46633594 tgttttgcaaaccaaac 46633578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 43368198 - 43368080
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||   ||||||||||||| | || |||| | |||||| ||| ||||||||   |||||||||| ||| | ||| || ||    
T  43368198 tataaaacaaaaaattattcaatgtgataaaaatttgtcatgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgct 43368099  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  43368098 gttttgcaaaccaaacgca 43368080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 11250623 - 11250558
Alignment:
Q  19 atcatataaaacaagaaattattcaataccata-aaaatttgtcctttgttgttatgccttgtgtt 83  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||| || |||| |||||||||||    
T  11250623 atcatataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgccttgtgtt 11250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 16028018 - 16028082
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttg 84  Q
    ||||||||| |||| ||||| || |||||||||||||| |||||| ||||||||||||||||||||    
T  16028018 atcatataagacaa-aaattgttaaataccataaaaatctgtcctatgttgttatgccttgtgttg 16028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 11321983 - 11322099
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | |  |||| ||||||||||||  |||||||   |||||||||| |||||  || ||||    
T  11321983 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtccgatacttac 11322082  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  11322083 tgttttgcaaaccaaac 11322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 18386522 - 18386406
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| |||||  |||||||| |||||| | ||||||| ||||||||||||   ||||||   |||||| |||||||||| || || |    
T  18386522 tataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctattttgtaccgttttgtccaatacttgc 18386423  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  18386422 tgttttgcaaaccaaac 18386406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 41665672 - 41665788
Alignment:
Q  22 atataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    ||||||||||  |||||||||||||||||||||||||||| | || | |||||| || ||||| ||||| ||   ||||| |||| ||| | ||| ||||    
T  41665672 atataaaacagaaaattattcaataccataaaaatttgtcttgtgctattatgcgttatgttgtgctgtcctatcttgtattgttatgttccgtacttac 41665771  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||| |||||||||    
T  41665772 tgttttgtaaaccaaac 41665788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 47947757 - 47947649
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | || |||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  47947757 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 47947658  T
Q  122 ttttttgca 130  Q
    | |||||||    
T  47947657 tgttttgca 47947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 47953187 - 47953079
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | || |||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  47953187 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 47953088  T
Q  122 ttttttgca 130  Q
    | |||||||    
T  47953087 tgttttgca 47953079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 14608501 - 14608560
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttct 93  Q
    ||||| || |||||||||||| |||||||| |||||||||||||||||||| | ||||||    
T  14608501 aaattgtttaataccataaaagtttgtcctatgttgttatgccttgtgttgtgttgttct 14608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 1870141 - 1870015
Alignment:
Q  13 aaaaatatcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtc 111  Q
    ||||| ||| |||||||||| |||||| |||||  |||||||| ||| || | || |||| ||||||||||||  |||||||  ||||||||||| |||     
T  1870141 aaaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttatcatgtgctgttctgccttgtgttgtactgttctatattgtactgttatgta 1870042  T
Q  112 cagtatttacttttttgcaaaccaaac 138  Q
    |||||  | || |||||||||||||||    
T  1870041 cagtacatgctgttttgcaaaccaaac 1870015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 15035354 - 15035412
Alignment:
Q  26 aaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttg 84  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||| ||  ||||||||    
T  15035354 aaaacaaaaaattattcaataccataaaaatttgtcatgtgttgttctgttttgtgttg 15035412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 37966982 - 37966856
Alignment:
Q  12 caaaaatatcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtc 111  Q
    |||||| ||| |||||||||| |||||||| ||||||||||||||||||  | |  | || ||| |||||||| |||||| ||  || || | || ||||    
T  37966982 caaaaaaatcgtataaaacaaaaaattatttaataccataaaaatttgttatgtactattctgctttgtgttgtgctgttatgtcttatattattatgtc 37966883  T
Q  112 cagtatttacttttttgcaaaccaaac 138  Q
     |||| ||||| |||||||||||||||    
T  37966882 tagtacttactattttgcaaaccaaac 37966856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 1363634 - 1363586
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgtt 71  Q
    |||||||||| |||||||||||| ||||||||||||||| | |||||||    
T  1363634 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgttgtt 1363586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 23349392 - 23349504
Alignment:
Q  26 aaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttactttt 125  Q
    ||||||| ||||||||||||   ||||||||||||| | || |||| | |||| |||||   ||||||   |||||||||| |||||| || ||||| ||    
T  23349392 aaaacaaaaaattattcaatgttataaaaatttgtcatgtgctgttctaccttatgttgttttgttctatcttgtactgttatgtccattacttactatt 23349491  T
Q  126 ttgcaaaccaaac 138  Q
    |||||||||||||    
T  23349492 ttgcaaaccaaac 23349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26652863 - 26652795
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgtt 91  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| | |||||| ||| ||||||    
T  26652863 tataaaacaaaaaattattcaatgtcataaaaatttgtcctatgctgttctcccttgtattgtgctgtt 26652795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 40753152 - 40753080
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| ||||||| ||| ||||||||  ||||||||    
T  40753152 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgctttgtgttgtactgttctg 40753080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 43214023 - 43214091
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgtt 91  Q
    |||||||||| |||| |||||||  |||||||||||||||| || |||| | |||||||||| ||||||    
T  43214023 tataaaacaaaaaatgattcaatgtcataaaaatttgtcctgtgctgttctaccttgtgttgtgctgtt 43214091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 26371907 - 26372017
Alignment:
Q  23 tataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| |||| ||||||||||| | || |||| ||  || |||||  |||||||   |||||||||| ||||||||| ||||    
T  26371907 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgatgttctgttttatgttgtactgttctatcttgtactgttatgtccagtacttac 26372006  T
Q  122 ttttttgcaaa 132  Q
    | |||| ||||    
T  26372007 tgtttttcaaa 26372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 34117404 - 34117354
Alignment:
Q  88 tgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||  |||||||||| ||||||||| ||||| |||||||||||||||    
T  34117404 tgttctgtcttgtactgttatgtccagtacttactgttttgcaaaccaaac 34117354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 16963034 - 16962993
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  16963034 ttgtactgttctgtccagtacttactgttttgcaaaccaaac 16962993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 29455940 - 29456005
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttg 84  Q
    ||||||||| || | | ||||||||||||||||||| |||||| | ||||||| |||||| |||||    
T  29455940 atcatataagaccaaatattattcaataccataaaagtttgtcatgtgttgttttgccttatgttg 29456005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 34117449 - 34117392
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgt 80  Q
    |||||||| | |||||||||||| ||||||||||||||| | ||||||| || |||||    
T  34117449 tataaaacgaaaaattattcaatgccataaaaatttgtcttgtgttgttctgtcttgt 34117392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 40753092 - 40753051
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  40753092 ttgtactgttctgtccagtacttactgttttgcaaaccaaac 40753051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 43189392 - 43189457
Alignment:
Q  73 tgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    ||||||||||||  |||||||   || ||||||| ||||||||| ||||| |||||||||||||||    
T  43189392 tgccttgtgttgtactgttctatcttatactgttatgtccagtacttactgttttgcaaaccaaac 43189457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 46448742 - 46448799
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgt 80  Q
    |||||||||| |||||||||||| | ||||||| ||||||  ||||||| ||||||||    
T  46448742 tataaaacaaaaaattattcaatgcaataaaaaattgtccaatgttgttttgccttgt 46448799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 43158784 - 43158900
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| |  |||| || |||||||||  |||||||   |||||||| | | || |||| || |    
T  43158784 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgttctgtcttgtgttgtactgttctatcttgtactgctctatctagtacttgc 43158883  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  43158884 tgttttgcaaaccaaac 43158900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 46448801 - 46448845
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaacgca 141  Q
    |||||||||| |||| |||| ||||| ||||||||||||||||||    
T  46448801 ttgtactgttatgtcaagtacttactattttgcaaaccaaacgca 46448845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 3649634 - 3649514
Alignment:
Q  21 catataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattta 120  Q
    ||||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||| ||||||||||||| |||||| |||||||||| |||    
T  3649634 catataaaacaagaaattattcaataccataaaaatttgtgatgtgctgttatgccttgtgttgtgctgttctgcattatactgtgttgtccagtactta 3649535  T
Q  121 cttttttgcaaaccaaacgca 141  Q
    || ||||||||||||||||||    
T  3649534 ctattttgcaaaccaaacgca 3649514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 22318470 - 22318590
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |||||||||||||||||| || ||||||||| |    
T  22318470 atcatataaaacaagaaattattcaatatcataaaaatttgtcatgtgttgttatgtcttgtgttgtgctgttctgcattgtactcttctgtccagtact 22318569  T
Q  119 tacttttttgcaaaccaaacg 139  Q
    |||| ||||||||||||||||    
T  22318570 tactgttttgcaaaccaaacg 22318590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 9807152 - 9807037
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||  |||||||||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||   |||||||||| ||||||||| |||||    
T  9807152 tataaaacataaaattattcaatgccatacaaatttgtcctgtgctgttatgccttgtgttgtgctgttctatcttgtactgttctgtccagtacttact 9807053  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  9807052 attttgcaaaccaaac 9807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 50729627 - 50729734
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||| |||| ||||||||||||| || || ||||||||||||||||| ||||||||||||| ||||||   |||||||||||||| ||||||||||    
T  50729627 aaattatttaatatcataaaaatttgttctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgccgtccagtatttactattttgcaaac 50729726  T
Q  134 caaacgca 141  Q
    ||||||||    
T  50729727 caaacgca 50729734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 39078661 - 39078596
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttg 84  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  39078661 atcatataaaataagaaattattcaataccataaaaatttatcctgtgttgttatgccttgtgttg 39078596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 20802617 - 20802737
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||| |||||     
T  20802617 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtac 20802716  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    || || |||||||||||||||    
T  20802717 ttgctgttttgcaaaccaaac 20802737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 21580022 - 21579906
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||| | |||||| ||||||||||||||| |||||||| ||||||| ||||||||||||  |||||||   || ||||||| ||||||||| ||||    
T  21580022 tataaaactaaaaattactcaataccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttac 21579923  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  21579922 tgttttgcaaaccaaac 21579906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 53200730 - 53200854
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtac-----tgttttgtcca 113  Q
    |||||| ||||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||| | |||||||  ||||||     |||| | ||||    
T  53200730 atcatacaaaacaaaaaattattcaataccataaaaatttgttctgtgttgttatgccttatgttgtgatgttctgttttgtactgatatgttctatcca 53200829  T
Q  114 gtatttacttttttgcaaaccaaac 138  Q
    ||| ||||| |||||||||||||||    
T  53200830 gtacttactcttttgcaaaccaaac 53200854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 30942788 - 30942670
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||||||||||||||||||||| | ||||||||||||| | || | |||| |||||| |||   ||||||  |||||||||||||||||| || |    
T  30942788 atcatataaaacaagaaattattcaatgctataaaaatttgtcatatgctattataccttgtattgtaatgttcttaattgtactgttttgtccaatact 30942689  T
Q  119 tacttttttgcaaaccaaa 137  Q
    |||| |||| |||||||||    
T  30942688 tactgttttacaaaccaaa 30942670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 26083336 - 26083259
Alignment:
Q  21 catataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcatt 98  Q
    ||||||||||| ||||||||||||||||||||||||||||| | |  ||||||||||||||||| | |||||||||||    
T  26083336 catataaaacatgaaattattcaataccataaaaatttgtcgtgtactgttatgccttgtgttgtgttgttctgcatt 26083259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 7001839 - 7001751
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||||| ||||||||||||||||| | ||||| || ||||||||| | |||||||  ||||||| ||||||||||||||||||    
T  7001839 aaattattcaatgccataaaaatttgtcctgtattgttctgtcttgtgttgtgatgttctgtcttgtactattttgtccagtatttact 7001751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 21202736 - 21202620
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||| | ||||||||| |||||| | || |||| ||  |||||||| |||||||||  |||||||||||||||||||| ||||    
T  21202736 tataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgttctgttttgtgttgtgctgttctgtcttgtactgttttgtccagtacttac 21202637  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  21202636 tattttgcaaaccaaac 21202620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 37865749 - 37865633
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaat-ttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| |||||||||  ||||| | ||||||| ||||||||||||  |||||||   |||||||||| ||||| ||| ||||    
T  37865749 tataaaacaaaaaattattcaatgccataaaaaaattgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtcccgtacttac 37865650  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  37865649 tgttttgcaaaccaaac 37865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 7555047 - 7555162
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| ||||||||||||||| | || |||| || ||||||||| | |||| ||  ||||||||||  ||||| || |||||    
T  7555047 tataaaacaaaaaattattcaatgccataaaaatttgtcgtgtgatgttctgtcttgtgttgtgttgttttgtcttgtactgttaagtccaatacttact 7555146  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  7555147 attttgcaaaccaaac 7555162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 29592895 - 29592781
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||| |||||||||||| ||| ||||||||||| | |  |||| ||||||||||||     |||||  |||||||| | |||||||||||    
T  29592895 atcatataaaacaaaaaattattcaatgccaaaaaaatttgtcttgttctgttctgccttgtgttg-----ttctgtcttgtactgatatgtccagtatt 29592801  T
Q  119 tacttttttgcaaaccaaac 138  Q
    |||| |||||||||||||||    
T  29592800 tactgttttgcaaaccaaac 29592781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 55065423 - 55065541
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||| ||||| ||||||||||||||||| || |||| ||||||||||||  || || |   || ||||||| ||||||||| || ||    
T  55065423 tataaaacaaaaaattactcaatgccataaaaatttgtcctgtgctgttctgccttgtgttgtactattttatcttatactgttatgtccagtacttgct 55065522  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  55065523 gttttgcaaaccaaacgca 55065541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 52319311 - 52319206
Alignment:
Q  34 aaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaa 132  Q
    |||||| ||||| ||||||||| |||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| || || |||||||||    
T  52319311 aaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 52319212  T
Q  133 ccaaac 138  Q
    ||||||    
T  52319211 ccaaac 52319206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 24002334 - 24002218
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||| ||||| |||||||| || |||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  24002334 tataaaacaaaaaattactcaatgccaaaaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 24002235  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  24002234 tgttttgcaaaccaaac 24002218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 43641095 - 43640979
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||||| ||||| || |||| ||||||||||||  |||||||   |||||||||| |||| |||| || |    
T  43641095 tataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttgc 43640996  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  43640995 tgttttgcaaaccaaac 43640979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 49152189 - 49152305
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  |||||||   || ||||||| ||||||||| || |    
T  49152189 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgc 49152288  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  49152289 tgttttgcaaaccaaac 49152305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 2786960 - 2786845
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| | ||||||| |||||   || |||| |||||| ||||| | ||||| |  |||||||||| ||||||||| |||||    
T  2786960 tataaaacaaaaaattattcaatgcaataaaaaattgtctagtgctgttttgccttatgttgtgttgttcggtcttgtactgttatgtccagtacttact 2786861  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  2786860 gttttgcaaaccaaac 2786845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 50186524 - 50186411
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    ||||||| || ||||||||||||  |||||||||||||||| |||||||||| ||| ||||| ||| || ||  || |||||||  ||| |||| |||||    
T  50186524 tataaaataaaaaattattcaatgtcataaaaatttgtcctatgttgttatgtcttatgttgtgctattttgtcttatactgttcagtcaagtacttact 50186425  T
Q  123 tttttgcaaaccaa 136  Q
     |||||||||||||    
T  50186424 gttttgcaaaccaa 50186411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 14296593 - 14296477
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||| ||||||||  |||||||  ||||| ||||| ||||||||| |||     
T  14296593 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtccagtacttat 14296494  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||||| |||||    
T  14296493 tgttttgcaaatcaaac 14296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 23521876 - 23521760
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | || |||| ||||||||||||  ||||| |   |||||||||| ||||||||| || |    
T  23521876 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttttatcttgtactgttctgtccagtacttgc 23521777  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  23521776 tgttttgcaaaccaaac 23521760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 37931916 - 37931801
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||| | |||||||||||| ||||||||| ||||| | || |||| |||||||| ||  | | || ||  |||||||||| ||||||||| |||||    
T  37931916 tataaaacgaaaaattattcaatgccataaaaagttgtcttgtgctgttctgccttgtattatgttattatgtcttgtactgttatgtccagtacttact 37931817  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  37931816 gttttgcaaaccaaac 37931801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 50178583 - 50178698
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| | |||||| ||| | ||||||   |||||||||| ||| | ||| || ||    
T  50178583 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgatgttctcccttgtattgtgatgttctttcttgtactgttctgtactgtacttgct 50178682  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  50178683 gttttgcaaaccaaac 50178698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 33177122 - 33177236
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||  |||||| ||||| |||||||| ||||||||||||||||| || |||||||||  |||||||   || ||||||| |||| |||| ||||    
T  33177122 tataaaacataaaattactcaatgccataaaatatttgtcctttgttgttctgtcttgtgttgtactgttctatcttatactgttctgtcaagtacttac 33177221  T
Q  122 ttttttgcaaaccaa 136  Q
      |||||||||||||    
T  33177222 cgttttgcaaaccaa 33177236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 37695631 - 37695749
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| ||||||||||||||| | || |||| | |||||| ||| | ||||||   |||||||||| ||| ||||| ||  |    
T  37695631 tataaaacaaaaaattattcaatgccataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtacttgtt 37695730  T
Q  123 tttttgcaaaccaaacgca 141  Q
     |||||||||| |||||||    
T  37695731 gttttgcaaactaaacgca 37695749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 6776583 - 6776482
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    |||| ||| |||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||||||||||||  |||||||   |||||||||| |||||    
T  6776583 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 6776484  T
Q  113 ag 114  Q
    ||    
T  6776483 ag 6776482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 52949716 - 52949600
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| || | || | |||||| ||| ||||||||   |||||||||| ||| | ||| || ||    
T  52949716 tataaaacaa-aaattattcaatgtcataaaaatttgtcctgtgctattctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgct 52949618  T
Q  123 tttttgcaaaccaaacgc 140  Q
     |||||||||||||||||    
T  52949617 gttttgcaaaccaaacgc 52949600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 14314841 - 14314725
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||| ||||||||  |||||||  ||||| ||||| ||||||||| |||     
T  14314841 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtccagtacttat 14314742  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||| ||||| |||||    
T  14314741 tgtttagcaaatcaaac 14314725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 29785627 - 29785743
Alignment:
Q  23 tataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| |||| ||||||||||| | || |||| ||||||||||||  |||||||   || ||||||| ||| ||||| |||     
T  29785627 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgttcagtacttat 29785726  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||||| |||||    
T  29785727 tgttttgcaaatcaaac 29785743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 33552932 - 33553004
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||  ||||||||    
T  33552932 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttttgccttgtgttgtactgttctg 33553004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 44324432 - 44324500
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgtt 91  Q
    |||||||||| |||||||||||| ||||||||||||||| | || |||| |||||| ||||| ||||||    
T  44324432 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgccttatgttgtgctgtt 44324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 56154621 - 56154501
Alignment:
Q  19 atcatataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| |||| ||||||||||| | |  |||| ||||||||||||  |||||||   || ||||||| |||||||||     
T  56154621 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttatactgttctgtccagtac 56154522  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    ||  | |||||||||||||||    
T  56154521 ttgttgttttgcaaaccaaac 56154501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 24210314 - 24210252
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttg 84  Q
    |||||||||| |||||| |||||||||||||| ||||||| | ||||||| ||||||||||||    
T  24210314 tataaaacaaaaaattactcaataccataaaatatttgtcatgtgttgttctgccttgtgttg 24210252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 41711851 - 41711806
Alignment:
Q  15 aaatatcatataaaacaagaaattattcaataccataaaaatttgt 60  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||    
T  41711851 aaatatcgtataaaacaaaaaattattcaatagcataaaaatttgt 41711806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 34929911 - 34929795
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| || ||| | ||| |||||||||||| ||| | || |||| ||||||||||||  || || |   ||||||||||||||| ||| |||||    
T  34929911 tataaaacaaaaatttactgaatgccataaaaattttgtcatgtgctgttctgccttgtgttgtactattttattttgtactgttttgtctagtttttac 34929812  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  34929811 tgttttgcaaaccaaac 34929795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 53343567 - 53343639
Alignment:
Q  23 tataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||||||||| |||| ||||||||||| | ||||||| ||| ||||||||  ||||||||    
T  53343567 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgttctgcattgtgttgtactgttctg 53343639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 10184870 - 10184917
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaaatttgtc 61  Q
    |||||||||||||| |||| ||||| ||||||||||||||| ||||||    
T  10184870 aaaatatcatataagacaaaaaattgttcaataccataaaagtttgtc 10184917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 13110327 - 13110209
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||| ||||||| ||||||| |||| |||||||||||||| ||  |||||| | ||||||| |  | ||||||   ||||| |||||| |||| || |    
T  13110327 atcatacaaaacaa-aaattatgcaatgccataaaaatttgttctgcgttgttctaccttgtgctatgttgttctatcttgtattgttttatccactact 13110229  T
Q  119 tacttttttgcaaaccaaac 138  Q
    |||| |||||||||||||||    
T  13110228 tactgttttgcaaaccaaac 13110209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 20518112 - 20518199
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttg 109  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  || ||||   |||||||||||||    
T  20518112 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactattctatcttgtactgttttg 20518199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 12600880 - 12600766
Alignment:
Q  25 taaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttactt 123  Q
    |||||||| ||| || ||||| ||||||||| ||||||   || |||| || |||||||||  |||||||   |||||||||| ||||||||| || ||     
T  12600880 taaaacaaaaaactactcaatgccataaaaaatttgtcaagtgctgttctgacttgtgttgtactgttctatcttgtactgttctgtccagtacttgctg 12600781  T
Q  124 ttttgcaaaccaaac 138  Q
    |||||||||||||||    
T  12600780 ttttgcaaaccaaac 12600766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 47642581 - 47642699
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  ||||||||||| |||| || |||| | |||||| ||| | ||||||   |||||||||| ||| |  || ||  |    
T  47642581 tataaaacaaaaaattattcaatgtcataaaaatttatcctgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgtactatacttgtt 47642680  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  47642681 gttttgcaaaccaaacgca 47642699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 46680655 - 46680696
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  46680655 ttgtactgttctgtccagtacttactattttgcaaaccaaac 46680696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 29616166 - 29616094
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | ||||||| || |||||||||  ||||||||    
T  29616166 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgtcttgtgttgtactgttctg 29616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 32858319 - 32858283
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttg 59  Q
    |||||||||| |||||||||||||| |||||||||||    
T  32858319 tataaaacaaaaaattattcaatactataaaaatttg 32858283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 36497153 - 36497109
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaacgca 141  Q
    |||||||||| ||||||||| || || ||||||||||||||||||    
T  36497153 ttgtactgttatgtccagtacttgctgttttgcaaaccaaacgca 36497109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 47361499 - 47361571
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| |||||| ||||||| ||||||| | || |||| ||||||||||||  ||||||||    
T  47361499 tataaaacaaaaaattactcaatatcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctg 47361571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 37148676 - 37148795
Alignment:
Q  22 atataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||| ||| ||||||||||||||||| ||||    
T  37148676 atataaaataagaaattattcaataccataaaaatttgtcctgtgctgttataccttgtgttgtgctgttctgtattatactgttttgtccagtacttac 37148775  T
Q  122 ttttttgcaaaccaaacgca 141  Q
    | ||||||||||||||||||    
T  37148776 tgttttgcaaaccaaacgca 37148795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 18470529 - 18470649
Alignment:
Q  21 catataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattta 120  Q
    |||||||||||||||||||||||||||||||||||||||| || || ||||||| ||||| ||| ||||||||||||| ||||||  ||||||||| |||    
T  18470529 catataaaacaagaaattattcaataccataaaaatttgttctgtgctgttatgtcttgtattgtgctgttctgcattatactgtgctgtccagtactta 18470628  T
Q  121 cttttttgcaaaccaaacgca 141  Q
    || ||||||||||||||||||    
T  18470629 ctattttgcaaaccaaacgca 18470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 4689801 - 4689919
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||| | ||||||| |||||| ||||| | |||||||  |||||||||| |||||| || || ||    
T  4689801 tataaaacaaaaaattattcaatgtcataaaaatttgtcatgtgttgttctgccttatgttgtgttgttctgtcttgtactgttatgtccattacttgct 4689900  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  4689901 gttttgcaaaccaaacgca 4689919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 4818234 - 4818359
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    |||| ||| |||||||||| |||||| ||||| |||||||| ||||||| | ||||||| ||||||||||||  |||||||   |||||||||| |||||    
T  4818234 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgcactgttctatcttgtactgttctgtcc 4818333  T
Q  113 agtatttacttttttgcaaaccaaac 138  Q
    |||| || || |||||||||||||||    
T  4818334 agtacttgctgttttgcaaaccaaac 4818359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 5673137 - 5673016
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||| | |||||||| |||||||||||| ||||||||||||||||| |||||| |   |||||||||| |||| |||| ||||    
T  5673137 tataaaacaaaaaattactcattgccataaaatatttgtcctttgatgttatgccttgtgttgtgctgttatatcttgtactgttctgtcaagtacttac 5673038  T
Q  122 ttttttgcaaaccaaacgcatt 143  Q
    | ||||| ||||||||| ||||    
T  5673037 tgttttgtaaaccaaacacatt 5673016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 2351670 - 2351557
Alignment:
Q  26 aaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttt 124  Q
    ||||||| |||||| ||||| ||||||||| ||| |||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| || || |    
T  2351670 aaaacaaaaaattactcaatgccataaaaaatttatcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgt 2351571  T
Q  125 tttgcaaaccaaac 138  Q
    ||||||||||||||    
T  2351570 tttgcaaaccaaac 2351557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 7770382 - 7770498
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| || | || || ||||||||| | |||||||  ||||||  || ||||||||| || ||    
T  7770382 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctattctgtcttgtgttgtgttgttctgtcttgtacgattatgtccagtacttgct 7770481  T
Q  123 tttttgcaaaccaaacg 139  Q
     ||||||||||||||||    
T  7770482 gttttgcaaaccaaacg 7770498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 8136832 - 8136716
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaat-ttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| | |||| ||||| |||||||||  ||||||| ||||||||||||||||||||  |||||||   ||||||| || ||||||||| ||||    
T  8136832 tataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttgttatgccttgtgttgtactgttctatcttgtactattctgtccagtacttac 8136733  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||| ||||||||||    
T  8136732 tgttttacaaaccaaac 8136716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 32528708 - 32528592
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| ||||||||| |||||| | || |||| |||||| |||||  |||||||   |||||||||| ||||||||| ||||    
T  32528708 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttac 32528609  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||||||| |||||    
T  32528608 tattttgcaaatcaaac 32528592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 35701270 - 35701154
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||| | ||||||||| |||||||| |||| || ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  35701270 tataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttattctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 35701171  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  35701170 tgttttgcaaaccaaac 35701154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 7725912 - 7726027
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| ||||||||||||||||| |  | || | |||||||||| | ||| |||  |||||||||| |||| |||| |||||    
T  7725912 tataaaacaaaaaattattcaattccataaaaatttgtcctatactattctaccttgtgttgtgatgtactgtcttgtactgttatgtctagtacttact 7726011  T
Q  123 tttttgcaaaccaaac 138  Q
     ||||||||| |||||    
T  7726012 gttttgcaaatcaaac 7726027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 34794880 - 34794765
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| ||| ||||| ||| || | ||||||| ||||||||||||  |||||||   |||||||||| |||||| || ||||    
T  34794880 tataaaacaaaaaattattcaatgccacaaaaaatttatcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttac 34794781  T
Q  122 ttttttgcaaaccaaa 137  Q
    | ||||||||||||||    
T  34794780 tgttttgcaaaccaaa 34794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 3735350 - 3735232
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| | |||||| ||| ||| ||||   |||||||||| ||| |||||  | ||    
T  3735350 tataaaacaaaaaattattcaatgtcataaaaatttgtcctatgctgttctcccttgtattgtgctattctttcttgtactgttctgtacagtacctgct 3735251  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  3735250 gttttgcaaaccaaacgca 3735232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 41790565 - 41790681
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||  |||||| ||||| |||||||| ||||||| | ||||||| ||||||||||||  |||||||   || ||||||| ||||||||| ||||    
T  41790565 tataaaacataaaattactcaatgccataaaatatttgtcatgtgttgttctgccttgtgttgtactgttctattttatactgttctgtccagtacttac 41790664  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||| |||||||||    
T  41790665 tgttttgtaaaccaaac 41790681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 20119750 - 20119648
Alignment:
Q  36 attattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaacca 135  Q
    |||||||||| | || |||||||||| | |  |||| |||||||||||| ||||||||   |||||||||| |||||| || ||||| ||||||||||||    
T  20119750 attattcaatgctattaaaatttgtcatgtactgttctgccttgtgttgtgctgttctatcttgtactgttctgtccaatacttactgttttgcaaacca 20119651  T
Q  136 aac 138  Q
    |||    
T  20119650 aac 20119648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 24036223 - 24036110
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  ||  |||||||||| | ||||||| || ||| ||||| |||||||||  ||||||||||  || ||||| ||| |    
T  24036223 tataaaacaaaaaattattcaatgtca--aaaatttgtcatgtgttgttctgtcttatgttgtgctgttctgtcttgtactgttcagtacagtacttatt 24036126  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  24036125 gttttgcaaaccaaac 24036110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 40182457 - 40182341
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | || |||| ||||||||||||  |||||||   ||||| |||| ||||||||| || |    
T  40182457 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttttgccttgtgttgtactgttctttcttgtattgttctgtccagtacttgc 40182358  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||| |||||||||    
T  40182357 tgttttggaaaccaaac 40182341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 7523135 - 7523048
Alignment:
Q  51 aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    ||||||||||||| || |||| ||||||||||||  |||||||   |||||||||| |||||| || || || |||||||||||||||    
T  7523135 aaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttcctgttttgcaaaccaaac 7523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 31770690 - 31770765
Alignment:
Q  19 atcatataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttct 93  Q
    |||||||||||||| |||||| ||||| |||| ||||||||||||| || |||| ||||||||||||  |||||||    
T  31770690 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 31770765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 31644443 - 31644322
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||  ||||||||||||  |||||||||||||| | ||||||| | |||||| ||| ||| |||| | |||||||||| ||  | |||      
T  31644443 atcatataaaacataaaattattcaatgtcataaaaatttgtcttgtgttgttctaccttgtattgtgctattcttc-ttgtactgttctgcactgtaca 31644345  T
Q  119 tacttttttgcaaaccaaacgca 141  Q
    | || ||||||||||||||||||    
T  31644344 tgctgttttgcaaaccaaacgca 31644322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 11963323 - 11963218
Alignment:
Q  34 aaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaa 132  Q
    |||||| ||||| ||||||||| |||||| | |||| || ||| ||||||||  |||||||   |||||||||| ||||||||| || || |||||||||    
T  11963323 aaattactcaatgccataaaaaatttgtcatgtgttattctgctttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaa 11963224  T
Q  133 ccaaac 138  Q
    ||||||    
T  11963223 ccaaac 11963218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 24181727 - 24181799
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  ||||||||    
T  24181727 tataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctg 24181799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 29241371 - 29241299
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||||||||||||  ||||||||    
T  29241371 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctg 29241299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 32093083 - 32093200
Alignment:
Q  22 atataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    ||||||||||  ||| | |||||||||||||||||||||  | || |||| |||||||||||  | |||||||  |  ||||||| ||||||||| ||||    
T  32093083 atataaaacataaaaattttcaataccataaaaatttgtgttgtgctgttctgccttgtgttatgttgttctgtctcttactgttctgtccagtacttac 32093182  T
Q  122 ttttttgcaaaccaaacgca 141  Q
      ||||||||| ||||||||    
T  32093183 --ttttgcaaatcaaacgca 32093200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 14011549 - 14011587
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtc 61  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  14011549 tataaaacaagaaattgttcaataacataaaaatttgtc 14011587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 5571745 - 5571806
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgtt 83  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| |||||||||||    
T  5571745 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgtt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 24181787 - 24181828
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  24181787 ttgtactgttctgtccagtacttactgttttgcaaaccaaac 24181828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 35955000 - 35954916
Alignment:
Q  29 acaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcca 113  Q
    |||| ||||||||||||||||||||||||| |||  |  | || ||||||||| || |||||||||  ||| |||||| ||||||    
T  35955000 acaaaaaattattcaataccataaaaatttatccaatactattttgccttgtgatgtgctgttctgtcttgcactgttctgtcca 35954916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 43048 - 43170
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||||||||||||||||||||||||| |||||||||  || | || ||||||||||| ||| ||||||||||||||||||| | |||| |||| |    
T  43048 atcatataaaacaagaaattattcaataccacaaaaatttgatctgtattattatgccttgtattgtgctgttctgcattgtactgctctgtctagtact 43147  T
Q  119 tacttttttgcaaaccaaacgca 141  Q
    |||| ||||||||||||||||||    
T  43148 tactgttttgcaaaccaaacgca 43170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 13788 - 13908
Alignment:
Q  21 catataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattta 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||| ||  | ||||||||||| ||||||| ||||||||| |||    
T  13788 catataaaacaagaaattattcaataccataaaaatttgtcctgtgcaattatgccttgtattttgttgttctgcattatactgttctgtccagtactta 13887  T
Q  121 cttttttgcaaaccaaacgca 141  Q
    || ||||||||| ||||||||    
T  13888 ctgttttgcaaatcaaacgca 13908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 15001464 - 15001341
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||  |||||||||||||||||||||| ||| || | ||||||| |||||||||||| |||||||||  |||||||||| |||||||||     
T  15001464 atcatataaaacagaaaattattcaataccataaaaaatttatcttgtgttgttctgccttgtgttgtgctgttctgtcttgtactgttctgtccagtac 15001365  T
Q  118 ttacttttttgcaaaccaaacgca 141  Q
    ||||| ||||||||||||||||||    
T  15001364 ttactgttttgcaaaccaaacgca 15001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 29611165 - 29611256
Alignment:
Q  21 catataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||||| ||||||| |||||    
T  29611165 catataaaacaagaaattattcaataccataaaaatttgtcctgtgttgttatgccttgtgttgtgttgttatgcattatactgttctgtcc 29611256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 35225659 - 35225540
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||||||| || ||||||||| | ||| |||  ||||||| || ||||||||| |    
T  35225659 atcatataaaacaggaaattattcaataccataaaaatttgtcttgtgttgttctgtcttgtgttgtgttgtcctgtcttgtactattctgtccagtact 35225560  T
Q  119 tacttttttgcaaaccaaac 138  Q
    |||| |||||||||||||||    
T  35225559 tactgttttgcaaaccaaac 35225540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 37618504 - 37618622
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| ||||||| ||||||| | || |||| |||||||||||| |||||| ||  |||||||||| ||||||||| ||||     
T  37618504 tataaaacaaaaaattattcaatgccataaacatttgtcatgtgctgttctgccttgtgttgtgctgttatgttttgtactgttatgtccagtacttacc 37618603  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  37618604 gttttgcaaaccaaacgca 37618622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 8673163 - 8673283
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| |||||||||||| ||||| || |||| ||||||||||||  |||||||   ||||||||||||||||||||     
T  8673163 atcatataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttttgtccagtac 8673262  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    || || |||||||||||||||    
T  8673263 ttgctgttttgcaaaccaaac 8673283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 40389033 - 40388915
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    ||||||| || |||||||||||| |||||||| ||| |||| ||||||| |||||||||||| |||||| ||  ||||||| || ||||||||| ||||     
T  40389033 tataaaataaaaaattattcaatgccataaaattttttcctgtgttgttctgccttgtgttgtgctgttatgtcttgtactcttatgtccagtacttacc 40388934  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  40388933 attttgcaaaccaaacgca 40388915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 31513695 - 31513811
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | ||||||| ||||||||||||  |||||||   ||||||||||||||||| || ||||    
T  31513695 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccaatacttac 31513794  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  31513795 tgttttgcaaaccaaac 31513811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 34101501 - 34101385
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||  ||||||||| |||||||| || |||| ||||||||||||  |||||||   || ||||||||||||||||| ||||    
T  34101501 tataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgatgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttac 34101402  T
Q  122 ttttttgcaaaccaaac 138  Q
    |||||||||||||||||    
T  34101401 ttttttgcaaaccaaac 34101385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 45114048 - 45113933
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||  ||||||||||||  |||| |||||| || | |||||||||||||||||||| |||| |||   |||||||||| ||||||||| |||||    
T  45114048 tataaaacataaaattattcaatgtcatacaaatttatcatgtgttgttatgccttgtgttgtgctgctctatcttgtactgttatgtccagtacttact 45113949  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  45113948 gttttgcaaaccaaac 45113933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 13407047 - 13407163
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| | |||||| ||||||| | ||||||| ||||||||||||  |||||||  ||||||||||| ||||||||| ||||    
T  13407047 tataaaacaaaaaattactcaatgctataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatattgtactgttctgtccagtacttac 13407146  T
Q  122 ttttttgcaaaccaaac 138  Q
    | ||||| |||||||||    
T  13407147 tgttttgtaaaccaaac 13407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 32303693 - 32303813
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| |||||||| ||||||||| || |||| |||||| |||||  |||||||   |||||||||| |||||||||     
T  32303693 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtactgttctgtccagtac 32303792  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    || || |||||||||||||||    
T  32303793 ttgctgttttgcaaaccaaac 32303813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 45446448 - 45446332
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | || |||| ||||||||||||  |||||||   |||||||||| ||||||||| ||||    
T  45446448 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttac 45446349  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  45446348 tgttttgcaaaccaaac 45446332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 30501138 - 30501020
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| || ||| ||||| | |||||||  ||||||| || |||| |||||||  |    
T  30501138 tataaaacaaaaaattattcaatgtcataaaaatttgtcctatggtgttttgtcttatgttgtgttgttctgtcttgtactattatgtcaagtatttgtt 30501039  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  30501038 gttttgcaaaccaaacgca 30501020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 32020113 - 32020229
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  32020113 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 32020212  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  32020213 tgttttgcaaaccaaac 32020229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 41709770 - 41709654
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaat-ttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||  ||||||| || |||| ||||||||||||  |||||||   ||||| |||| ||||||||| ||||    
T  41709770 tataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgctgttctgccttgtgttgtactgttctatcttgtattgttctgtccagtacttac 41709671  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  41709670 tgttttgcaaaccaaac 41709654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 17805654 - 17805567
Alignment:
Q  51 aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    ||||||||||||| ||||||| | |||||||||| | | |||||  ||||||||||||||| |||| ||||| |||||||||||||||    
T  17805654 aaaaatttgtcctgtgttgttctaccttgtgttgtgttattctgtcttgtactgttttgtcaagtacttactgttttgcaaaccaaac 17805567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 22999250 - 22999132
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  ||||||||||||| || || |||| | |||||| ||| ||||||||   ||||||||||||||   ||| || ||    
T  22999250 tataaaacaaaaaattattcaatgtcataaaaatttgttctgtgctgttctcccttgtattgtgctgttctttcttgtactgttttgtattgtacttgct 22999151  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  22999150 gttttgcaaaccaaacgca 22999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 29672435 - 29672551
Alignment:
Q  23 tataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||| ||||||||||||| ||||||| || |||||||||  |||||||   ||||| |||| ||||||||  ||||    
T  29672435 tataaaacaaaaaattactcaatgccatgaaaaatttgtcctgtgttgttctgtcttgtgttgcactgttctatcttgtattgttctgtccagttcttac 29672534  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||| ||||||||||    
T  29672535 tgttttacaaaccaaac 29672551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 34063121 - 34063005
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| ||||||||| |||||| | ||||||  |||||| |||||  |||||||   |||||||||| ||||||||| || |    
T  34063121 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgtgctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgc 34063022  T
Q  122 ttttttgcaaaccaaac 138  Q
      |||||||||||||||    
T  34063021 ggttttgcaaaccaaac 34063005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 5968976 - 5969067
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcca 113  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||    
T  5968976 tataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtactgttctatcttgtactgttctgtcca 5969067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 10656789 - 10656918
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcca 113  Q
    |||| ||| ||||||| || ||||||||||||| |||||||||||||| |  ||||||||| ||||||||| | ||||||   ||||||| || ||| ||    
T  10656789 aaaaaatcgtataaaagaaaaaattattcaataacataaaaatttgtcatacgttgttatgtcttgtgttgtgttgttctctcttgtactattatgttca 10656888  T
Q  114 gtat--ttacttttttgcaaaccaaacgca 141  Q
     |||  ||| | ||||||||||||||||||    
T  10656889 atatacttattgttttgcaaaccaaacgca 10656918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 3251768 - 3251884
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  |||||||   || || |||| |||||  || ||||    
T  3251768 tataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctgttctgccttgtgttgtactgttctatcttatattgttctgtccgatacttac 3251867  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  3251868 tgttttgcaaaccaaac 3251884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 6386569 - 6386453
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||  | || |||| ||||||||||||  |||||||   |||||||||| ||||||||| ||      
T  6386569 tataaaacaaaaaattactcaatgccataaaaaatttgttttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgt 6386470  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  6386469 tgttttgcaaaccaaac 6386453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 27103956 - 27103836
Alignment:
Q  19 atcatataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| |||| ||||||||||| | || |||| ||||||||||||   ||||||   |||||||||| |||||||||     
T  27103956 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtaatgttctatcttgtactgttctgtccagtac 27103857  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    ||  | ||||||||| |||||    
T  27103856 ttgttgttttgcaaatcaaac 27103836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 29563338 - 29563454
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | ||||||| | ||||||||||  |||||||   |||||||||| ||| || || || |    
T  29563338 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgttcaatacttgc 29563437  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  29563438 tgttttgcaaaccaaac 29563454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 4599644 - 4599539
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||||||||| |||||||||| || | ||||||| || ||||||||| | |||||||  || || |||||||| |||||  |||| ||| |||||     
T  4599644 aaattattcaatacaataaaaatttatcatatgttgttctgtcttgtgttgtgttgttctgtcttatattgttttgttcagtacatactatttagcaaat 4599545  T
Q  134 caaacg 139  Q
    ||||||    
T  4599544 caaacg 4599539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 6460245 - 6460152
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttactttttt 127  Q
    |||||||||||||||||||||||||||||| || |  | |||| |||| || |||||| ||   |||||||||||||| |||| ||||| ||||    
T  6460245 aaattattcaataccataaaaatttgtcctgtgctactctgccctgtgctgtgctgttttgtcctgtactgttttgtcaagtacttactgtttt 6460152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 30543134 - 30543206
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||  |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||  ||||||||    
T  30543134 tataaaacataaaattactcaatgccataaaatatttgtcctgtgttgttctgccttgtgttgtactgttctg 30543206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 31732057 - 31731941
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | || | || || |||||||||  |||||||   || |||| || ||||||||| ||||    
T  31732057 tataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctattctgtcttgtgttgtactgttctatcttatacttttctgtccagtacttac 31731958  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  31731957 tgttttgcaaaccaaac 31731941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 37474712 - 37474593
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    ||||||| || ||||||||||||  |||||||||||||| | || |||||| |||||| ||| ||||||||   |||||||| | | | | ||| || ||    
T  37474712 tataaaataaaaaattattcaatgtcataaaaatttgtcatgtgctgttatcccttgtattgtgctgttctttcttgtactgctatatgctgtacttgct 37474613  T
Q  123 tttttgcaaaccaaacgcat 142  Q
     |||||||||||||| ||||    
T  37474612 gttttgcaaaccaaaagcat 37474593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 7591559 - 7591629
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttct 93  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| | |||||| |||  |||||||    
T  7591559 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctcccttgtattgtactgttct 7591629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 41548611 - 41548541
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttct 93  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| | |||||| ||| | ||||||    
T  41548611 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgatgttctcccttgtattgtgttgttct 41548541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 9624219 - 9624182
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgtt 71  Q
    |||||||||||||||||||||||||||| | |||||||    
T  9624219 aaattattcaataccataaaaatttgtcatgtgttgtt 9624182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 16485917 - 16485958
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgt 60  Q
    ||||||||| |||  |||||||||||||||||||||||||||    
T  16485917 atcatataatacagaaaattattcaataccataaaaatttgt 16485958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 25478245 - 25478125
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    |||| ||| |||||||||| |||||| ||||| ||||||||| ||||||||     ||| ||||||||||||   ||||||   || ||||||||||||     
T  25478245 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcct-----gttctgccttgtgttgtattgttctatcttatactgttttgtca 25478151  T
Q  113 agtatttacttttttgcaaaccaaac 138  Q
    |||| ||||| |||| ||||||||||    
T  25478150 agtacttactgttttacaaaccaaac 25478125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 14005156 - 14005228
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| |||||  ||||||| ||||||||| ||||||| || |||||||||  ||||||||    
T  14005156 tataaaacaaaaaattactcaatgtcataaaaaatttgtcctatgttgttctgtcttgtgttgtactgttctg 14005228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 37664391 - 37664467
Alignment:
Q  19 atcatataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||||||| |||||| ||||| |||| ||||||||||| | || |||| ||| ||||||||  ||||||||    
T  37664391 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgcattgtgttgtactgttctg 37664467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 3867736 - 3867849
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||     || |||||||||||||||||| ||| ||||| |    
T  3867736 atcatataaaacaagaaattattcaataccataaaaacttgtcatgtgttgttatgccttgt-----gccgttctgcattgtactgttatgttcagtact 3867830  T
Q  119 tacttttttgcaaaccaaa 137  Q
    |||| ||||||||||||||    
T  3867831 tactgttttgcaaaccaaa 3867849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 51925299 - 51925417
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| ||||||||||||||| | || |||| |||||||||||| |||||| ||  |||||||||| | ||||||| ||||     
T  51925299 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgccttgtgttgtgctgttatgtcttgtactgttatatccagtacttacc 51925398  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  51925399 gttttgcaaaccaaacgca 51925417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 5442285 - 5442169
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| ||||||||| |||||| | ||||||||| |||||| |||  |||||||  ||||||||||| ||||||||| || |    
T  5442285 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgttataccttgtattgtactgttctaaattgtactgttctgtccagtacttgc 5442186  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  5442185 tattttgcaaaccaaac 5442169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 28675784 - 28675668
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| |||     
T  28675784 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttat 28675685  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  28675684 tgttttgcaaaccaaac 28675668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 4851547 - 4851663
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| | ||||| ||||||||||||  |||||||   |||||||||||||||| ||| || |    
T  4851547 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtcttgttctgccttgtgttgtactgttctatcttgtactgttttgtccggtacttgc 4851646  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  4851647 tgttttgcaaaccaaac 4851663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 25860512 - 25860628
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||| | |||||||| ||||||||| |||||||||||||| ||||| ||||||||   |||||||||| ||||||||  ||||    
T  25860512 tataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttgttatgccttttgttgtgctgttctatcttgtactgttctgtccagtgcttac 25860611  T
Q  122 ttttttgcaaaccaaac 138  Q
      |||||||||||||||    
T  25860612 cgttttgcaaaccaaac 25860628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 51259867 - 51259987
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| |||||||||||| ||| | || |||| ||||||||||||  |||||||   |||||||||| | |||||||     
T  51259867 atcatataaaacaaaaaattactcaatgccataaaaattttgtcttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctatccagtac 51259966  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    ||||| |||||||||||||||    
T  51259967 ttactgttttgcaaaccaaac 51259987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 31883113 - 31883228
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| ||||||| | |||||| ||| ||||||||   |||||||||| ||| | ||| || ||    
T  31883113 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgct 31883212  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  31883213 attttgcaaaccaaac 31883228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 3864761 - 3864881
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||| |||||| ||||| ||||||||| |||||||| || |||||||| || |||||   ||||||   |||||||||| ||| |||||     
T  3864761 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttatgcgttatgttgtaatgttctatcttgtactgttctgtgcagtac 3864860  T
Q  118 ttacttttttgcaaaccaaac 138  Q
    ||||| |||||||||||||||    
T  3864861 ttactgttttgcaaaccaaac 3864881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 33364869 - 33364987
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  ||||||||||||||||  |||||| |  ||||| ||| ||| ||||   |||||||||||||| | ||| || ||    
T  33364869 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgggttgttctctcttgtattgtgctattctttcttgtactgttttgtactgtacttgct 33364968  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  33364969 gttttgcaaaccaaacgca 33364987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 1344798 - 1344914
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaat-ttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||||  ||||| | || |||| || |||||||||  |||||||   |||||||||||||||||||| || |    
T  1344798 tataaaacaaaaaattactcaatgccataaaaaaattgtcatgtgatgttctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgc 1344897  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  1344898 tattttgcaaaccaaac 1344914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 22484845 - 22484949
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||||||||||||||||||||||| | || |||| | |||| ||||| | ||| ||   || ||||||| ||||||||| ||||| ||||||||||    
T  22484845 aaattattcaataccataaaaatttgtcttgtgctgttctaccttatgttgtgttgtcctatcttatactgttatgtccagtacttactgttttgcaaac 22484944  T
Q  134 caaac 138  Q
    |||||    
T  22484945 caaac 22484949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 26282478 - 26282594
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| |||||||| ||||||| | || |||| || |||||||||  |||||||   |||||||||| | ||||||| || |    
T  26282478 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctatccagtacttgc 26282577  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  26282578 tgttttgcaaaccaaac 26282594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 53557886 - 53558002
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| ||||||||||||  ||||| | | ||||| |||| |||| |||| ||||    
T  53557886 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttataccttgtattgttctgtcaagtacttac 53557985  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  53557986 tgttttgcaaaccaaac 53558002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 10747211 - 10747093
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||| | || |||| | |||||| ||| | ||||||   |||||||||||| | | ||| || ||    
T  10747211 tataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttatactgtacttgct 10747112  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  10747111 gttttgcaaaccaaacgca 10747093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 12349262 - 12349376
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| ||||||||||||  |||||||   |||||||||| |||||| || || |    
T  12349262 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttatgtccaatacttgc 12349361  T
Q  122 ttttttgcaaaccaa 136  Q
    | |||||||||||||    
T  12349362 tcttttgcaaaccaa 12349376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 50386547 - 50386661
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||   ||||||||||||||| || |||| | |||||| ||| ||||||||   |||||||||| ||| | ||| || ||    
T  50386547 tataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgttctcccttgtattgtgctgttcttttttgtactgttctgtactgtacttgct 50386646  T
Q  123 tttttgcaaaccaaa 137  Q
     ||||||||||||||    
T  50386647 gttttgcaaaccaaa 50386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 2135064 - 2134948
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| | ||||||| ||||||||||||  |||||||   |||||  ||| |||| |||| || |    
T  2135064 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtaacgttctgtctagtacttgc 2134965  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  2134964 tgttttgcaaaccaaac 2134948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 34026661 - 34026589
Alignment:
Q  23 tataaaacaagaaattattcaataccata-aaaatttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||| |||||| ||||||||||| |||||||||||| || |||| ||||||||||||  ||||||||    
T  34026661 tataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctg 34026589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 43175563 - 43175447
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||||||||||||| ||| || | || |||| || ||||| ||   |||||||   |||||||||||||||||||| || |    
T  43175563 tataaaacaaaaaattactcaataccataaaaaatttatcgtgtgctgttctgtcttgtattatactgttctatcttgtactgttttgtccagtacttgc 43175464  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  43175463 tgttttgcaaaccaaac 43175447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 53046732 - 53046848
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| ||||| || ||||||| ||||||||||||  |||||||   ||||| |||| ||| ||||| ||      
T  53046732 tataaaacaaaaaattactcaatgccataaaaaatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtattgttctgttcagtacttgt 53046831  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  53046832 tgttttgcaaaccaaac 53046848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 21373914 - 21373818
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||||||| ||||||||||||||||| |||        ||||||||| |||||||||  ||||| |||| |||||| || ||||| ||||||||||    
T  21373914 aaattattcaatgccataaaaatttgtcctgtgt--------cttgtgttgtgctgttctgtcttgtattgttctgtccaatacttactgttttgcaaac 21373823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 39052929 - 39053046
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa--atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattta 120  Q
    |||||||||| |||||| ||||| | ||||||  ||||||| | ||||||| |  |||||||||  |||||||   |||||||||| ||| ||| |||||    
T  39052929 tataaaacaacaaattactcaatgctataaaaaaatttgtcatgtgttgttctatcttgtgttgtactgttctatcttgtactgttctgttcagcattta 39053028  T
Q  121 cttttttgcaaaccaaac 138  Q
    || |||||||||||||||    
T  39053029 ctattttgcaaaccaaac 39053046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 3964287 - 3964163
Alignment:
Q  19 atcatataaaacaagaaattattcaataccata-aaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtat 117  Q
    |||||||||||||  ||||||||||||| |||| |||||||||| | || |||| |||||||| ||| | |||  ||  |||| ||||| | || ||||     
T  3964287 atcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgctgttctgccttgtattgtgttgtgttgtcttgtgctgttctatcaagtac 3964188  T
Q  118 ttacttttttgcaaaccaaacgcat 142  Q
    ||||| ||||||||| |||||||||    
T  3964187 ttactgttttgcaaatcaaacgcat 3964163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 21221451 - 21221567
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||||||| | || |||| |||||| |||||  |||||||   |||||||||| |||| |||| || |    
T  21221451 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtctagtacttgc 21221550  T
Q  122 ttttttgcaaaccaaac 138  Q
    | | |||||||||||||    
T  21221551 tgtattgcaaaccaaac 21221567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 28625010 - 28625064
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgcct 77  Q
    ||||| |||| ||||||||||||||||||||| |||||| | ||||||| |||||    
T  28625010 tataagacaaaaaattattcaataccataaaagtttgtcttgtgttgttctgcct 28625064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 44267740 - 44267698
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtc 61  Q
    |||||||||||||| |||||||| ||||| |||||||||||||    
T  44267740 atcatataaaacaaaaaattattgaatacgataaaaatttgtc 44267698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 52300421 - 52300356
Alignment:
Q  75 ccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaacgca 141  Q
    |||| ||||| |||||||||| |||||||||| |||||| || ||| | ||||||||||||||||||    
T  52300421 ccttttgttgtgctgttctgctttgtactgttctgtccaataatta-tgttttgcaaaccaaacgca 52300356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 3695438 - 3695479
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| |||| ||||||||||||||||    
T  3695438 ttgtactgttctgtccagtacttacatttttgcaaaccaaac 3695479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 20609799 - 20609840
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  20609799 ttgtactgttctgtccagtacttactgttttgcaaaccaaac 20609840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 34026601 - 34026560
Alignment:
Q  97 ttgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||||||||| ||||||||| ||||| |||||||||||||||    
T  34026601 ttgtactgttctgtccagtacttactgttttgcaaaccaaac 34026560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 40094496 - 40094435
Alignment:
Q  24 ataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttg 84  Q
    ||||||||| |||||| ||||| ||||||||| |||||| | ||||||| ||||||||||||    
T  40094496 ataaaacaaaaaattactcaatgccataaaaattttgtcatgtgttgttctgccttgtgttg 40094435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 26847307 - 26847271
Alignment:
Q  35 aattattcaataccataaaaatttgtcctttgttgtt 71  Q
    ||||||||||||||||||||||||||| | |||||||    
T  26847307 aattattcaataccataaaaatttgtcttgtgttgtt 26847271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 29584869 - 29584753
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    ||||||| || |||||| ||||| | ||||||| ||||| || |  |||| |||||| |||||  |||||||   |||||||||| ||||||||| || |    
T  29584869 tataaaataaaaaattactcaatgcaataaaaaatttgttctgtactgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgc 29584770  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  29584769 tgttttgcaaaccaaac 29584753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 29646048 - 29645944
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaac 133  Q
    |||||||| ||| ||||||||||||||| | || |||||| |||| ||||| | |||| ||  ||||| |||| |||||| || ||  | ||||||||||    
T  29646048 aaattatttaatgccataaaaatttgtcttgtgatgttataccttatgttgtgttgttttgtcttgtattgttctgtccaatacttgttattttgcaaac 29645949  T
Q  134 caaac 138  Q
    |||||    
T  29645948 caaac 29645944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 47958523 - 47958639
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| |||||  |||||||| ||||| || || |||| |||||||| |||   ||||||   ||||| |||| ||||||||| || |    
T  47958523 tataaaacaaaaaattactcaatgacataaaaaatttgttctatgctgttctgccttgtattgtagtgttctatcttgtattgttctgtccagtacttgc 47958622  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  47958623 tgttttgcaaaccaaac 47958639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 5543 - 5661
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||||||||||||| || |||| |||||||||||| | |||||||  |||||||||| ||||||||| || ||    
T  5543 tataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctgccttgtgttgtgttgttctgtcttgtactgttatgtccagtacttgct 5642  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  5643 gttttgcaaaccaaacgca 5661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 17867828 - 17867709
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  17867828 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgc 17867729  T
Q  122 ttttttgcaaaccaaacgca 141  Q
    | ||||||||||||||||||    
T  17867728 tgttttgcaaaccaaacgca 17867709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 17877611 - 17877492
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| || |    
T  17877611 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgc 17877512  T
Q  122 ttttttgcaaaccaaacgca 141  Q
    | ||||||||||||||||||    
T  17877511 tgttttgcaaaccaaacgca 17877492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 18597290 - 18597408
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    |||||||||||||| ||||||||||||||||||||||||| |  | ||||||| | ||| |||||| | |||||||| |||||||||| |||||| || |    
T  18597290 atcatataaaacaaaaaattattcaataccataaaaatttattatgtgttgttctacctagtgttgtgttgttctgctttgtactgttctgtccaatact 18597389  T
Q  119 tacttttttgcaaaccaaa 137  Q
    |||| |||| |||||||||    
T  18597390 tactgttttacaaaccaaa 18597408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 10959993 - 10959878
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| | || ||||||| ||||||||||||||| | ||||||| ||||||||| || | |||||||  |||||||||| | ||||||| |||||    
T  10959993 tataaaacaaaatatcattcaatgccataaaaatttgtcatgtgttgttctgccttgtgctgtgatgttctgtcttgtactgttctatccagtacttact 10959894  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  10959893 gttttgcaaaccaaac 10959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 17443255 - 17443140
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||  ||||||||||||  |||| ||||||||||| || ||||||||||||||||| | ||||||   |||||||||| |||||| ||||| ||    
T  17443255 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttgtactgttctgtccaatatttgct 17443156  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  17443155 gttttgcaaaccaaac 17443140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 29814858 - 29814742
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaat-ttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| | |||| ||||| |||||||||  ||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| ||||    
T  29814858 tataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttac 29814759  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  29814758 tgttttgcaaaccaaac 29814742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 14925592 - 14925707
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||  ||||||||||||  |||| ||||||||||| || ||||||||||||||||| | ||||||   || ||||||| ||||| ||| |||||    
T  14925592 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttttactgttatgtcccgtacttact 14925691  T
Q  123 tttttgcaaaccaaac 138  Q
    | ||||||||||||||    
T  14925692 tctttgcaaaccaaac 14925707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 18057512 - 18057397
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||  ||||||||||||  |||| ||||||||||| || | ||||||||||||||| ||||||||   || ||||||| | |||| || |||||    
T  18057512 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctattatgccttgtgttgtgctgttctatcttttactgttctatccaatacttact 18057413  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  18057412 gttttgcaaaccaaac 18057397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 23636216 - 23636101
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| |||||||||  |||| | |   ||| |||||| ||||| | |||||||  |||||||||| | |||||||||||||    
T  23636216 tataaaacaaaaaattattcaatgccataaaaaactgtcatgtacagttctgccttctgttgtgttgttctgtcttgtactgttatatccagtatttact 23636117  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  23636116 gttttgcaaaccaaac 23636101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 28502423 - 28502336
Alignment:
Q  51 aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    ||||| ||||||| ||||||| ||||||||||||  |||||||   |||||||||| ||||||||| ||||| |||||||||||||||    
T  28502423 aaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaac 28502336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 2614889 - 2614773
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    ||||||| || |||||| ||||| ||||||||| |||||| | ||||||| ||||||||||||  |||||||   || ||||||||||||||||| ||      
T  2614889 tataaaataaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttgt 2614790  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  2614789 tgttttgcaaaccaaac 2614773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 11212249 - 11212129
Alignment:
Q  24 ataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    ||||||||| |||||| ||||  |||||||| ||||||||| || |||| ||||||||||||  |||||||   |||||||||| |||||| || || ||    
T  11212249 ataaaacaaaaaattactcaaggccataaaacatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttgct 11212150  T
Q  123 tttttgcaaaccaaacgcatt 143  Q
     ||||||||||||||| ||||    
T  11212149 gttttgcaaaccaaacacatt 11212129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 15277073 - 15277189
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaattt-gtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||| ||| ||| | ||||||| |||||| |||||  |||||||   |||||||||| ||||||||| || |    
T  15277073 tataaaacaaaaaattactcaatgccataaaatttttgtcatgtgttgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgc 15277172  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  15277173 tgttttgcaaaccaaac 15277189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 24203356 - 24203240
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||| || |||| ||||||||||||  |||||||    ||||||||| |||||| || || |    
T  24203356 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcatgtactgttctgtccaatacttgc 24203257  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  24203256 tgttttgcaaaccaaac 24203240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 4494263 - 4494350
Alignment:
Q  51 aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    ||||||||||||| ||||||| |||||| ||||| ||||||||    ||||||||| |||| |||| ||||| |||||||||||||||    
T  4494263 aaaaatttgtcctgtgttgttctgccttatgttgtgctgttctatcctgtactgttctgtctagtacttactgttttgcaaaccaaac 4494350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 32409988 - 32410103
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| ||||||||||||  ||||||| ||||||| | || |||| ||||||||||||  |||||||   || ||||||| |||| |||||||||    
T  32409988 tataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtctagtatttac 32410087  T
Q  122 ttttttgcaaaccaaa 137  Q
    | ||||||||| ||||    
T  32410088 tgttttgcaaatcaaa 32410103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 10485150 - 10485033
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| ||||||||||||  |||||| ||||||||| ||||||| | |||||| ||| ||||||||   |||||||||| ||| | ||| || ||    
T  10485150 tataaaacaaaaaattattcaatgtcataaatatttgtcctgtgttgtt-tcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgct 10485052  T
Q  123 tttttgcaaaccaaacgca 141  Q
     |||| |||||||||||||    
T  10485051 gttttacaaaccaaacgca 10485033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 31870236 - 31870354
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||||| |||||||||||| ||||||||||||||| | ||||||| | |||| | ||| | ||||||   |||||||||| ||| || || ||  |    
T  31870236 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgttgttctcccttatattgtgttgttctttcttgtactgttatgtacaatacttgat 31870335  T
Q  123 tttttgcaaaccaaacgca 141  Q
     ||||||||||||||||||    
T  31870336 gttttgcaaaccaaacgca 31870354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 34684159 - 34684237
Alignment:
Q  60 tcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||| |||||||||||||| ||||| | ||| |||  ||||||||||||||||| || ||||| |||||||||||||||    
T  34684159 tcctgtgttgttatgccttatgttgtgttgtcctgtcttgtactgttttgtccaatacttactgttttgcaaaccaaac 34684237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 3932943 - 3933059
Alignment:
Q  23 tataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||||||||| |||| ||||||||||||| || |||| || |||||||||  |||||||   || ||||||||| |||| || ||      
T  3932943 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgtcttgtgttgtactgttctatcttatactgttttatccaatacttgt 3933042  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  3933043 tattttgcaaaccaaac 3933059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 14808136 - 14808251
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttact 122  Q
    |||||||| | |||||||||||| ||||||||||||||||| || | || | |||||| ||| | ||||||   |||||||||| ||| || |||||  |    
T  14808136 tataaaactaaaaattattcaattccataaaaatttgtcctgtgctattctcccttgtattgtgttgttctttcttgtactgttctgtacaatatttgtt 14808235  T
Q  123 tttttgcaaaccaaac 138  Q
     |||||||||||||||    
T  14808236 gttttgcaaaccaaac 14808251  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 5650849 - 5650897
Alignment:
Q  32 agaaattattcaataccataaaaatttgtcctttgttgttatgccttgt 80  Q
    |||||| ||||||||||| ||||||||||| |||||||||||| |||||    
T  5650849 agaaatcattcaataccacaaaaatttgtcatttgttgttatgtcttgt 5650897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 32132516 - 32132587
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttct 93  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  |||||||    
T  32132516 tataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 32132587  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 32805442 - 32805355
Alignment:
Q  51 aaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    ||||||||||| | || |||| ||||||||||||   ||||||   |||||||||| ||||||||| || || |||||||||||||||    
T  32805442 aaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaaac 32805355  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 11382040 - 11381970
Alignment:
Q  68 tgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttacttttttgcaaaccaaac 138  Q
    |||| ||||||||||||  |||||||   |||||||||| ||| ||||| ||||| |||||||||||||||    
T  11382040 tgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttactattttgcaaaccaaac 11381970  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 32614085 - 32614135
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttg 84  Q
    |||||||  |||||||||||| |||||| | ||||||||||||||||||||    
T  32614085 aaattatataataccataaaagtttgtcatatgttgttatgccttgtgttg 32614135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 167055 - 167131
Alignment:
Q  19 atcatataaaacaagaaattattcaataccat-aaaaatttgtcctttgttgttatgccttgtgttgggctgttctg 94  Q
    |||||||||||||| |||||| |||||  ||| ||||||||||| | || |||| ||||||||||||  ||||||||    
T  167055 atcatataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctg 167131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 7396270 - 7396306
Alignment:
Q  34 aaattattcaataccataaaaatttgtcctttgttgt 70  Q
    |||||||||||||||||||||||||||| | ||||||    
T  7396270 aaattattcaataccataaaaatttgtcatgtgttgt 7396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 29054354 - 29054239
Alignment:
Q  19 atcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatt 118  Q
    ||||||||| |||  ||||||||||||||||||||| ||| || | || |||| || ||| ||||| | ||| ||   |||||||||| ||||||||| |    
T  29054354 atcatataatacagaaaattattcaataccataaaa-tttatcttgtgctgttctgtcttatgttgtgttgtcctatcttgtactgttatgtccagtact 29054256  T
Q  119 tacttttttgcaaacca 135  Q
    || | ||||||||||||    
T  29054255 tattattttgcaaacca 29054239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 1743 - 1864
Alignment:
Q  20 tcatataaaacaagaaattattcaataccataaaaatttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtattt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||| || ||||||| |  ||||||||| |||||| ||| |||||| ||| |||| | || ||    
T  1743 tcatataaaacaaaaaattattcaataccataaaaatttgttctgtgttgttctctcttgtgttgtgctgttttgctttgtacagttctgtcaaatactt 1842  T
Q  120 acttttttgcaaaccaaacgca 141  Q
    | | ||||||||| ||||||||    
T  1843 attgttttgcaaatcaaacgca 1864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 23570 - 23454
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||||  || |||| ||||||||||||   ||||||   |||||||||| |||||||||||| |    
T  23570 tataaaacaaaaaattactcaatgccataaaaaatttgtccagtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtccagtatttgc 23471  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  23470 tgttttgcaaaccaaac 23454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 4673 - 4774
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    |||| ||| |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||  |||||||   |||||||||| |||||    
T  4673 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 4772  T
Q  113 ag 114  Q
    ||    
T  4773 ag 4774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 2441 - 2557
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| |||||  |||||||| |||||| | || |||| ||||||||||||  || ||||   |||||||||| ||||||||| || |    
T  2441 tataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactattctatcttgtactgttctgtccagtacttgc 2540  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  2541 tgttttgcaaaccaaac 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 51432 - 51316
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| |||||  |||||||| |||||| | || |||| || ||||| ||   |||||||  ||||||||||| ||||||||| || |    
T  51432 tataaaacaaaaaattactcaatgtcataaaaaatttgtcttgtgctgttctgtcttgtattatactgttctatattgtactgttctgtccagtacttgc 51333  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  51332 tgttttgcaaaccaaac 51316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 15165 - 15049
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaaatttgtcctt-tgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| |||||||  ||| | | | ||||||| |||||| |||||  |||||||   |||||||||| ||||| ||| ||||    
T  15165 tataaaacaacaaattactcaatgccataaattttttttcatgtgttgttctgccttatgttgtactgttctattttgtactgttctgtccggtacttac 15066  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  15065 tgttttgcaaaccaaac 15049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 101951 - 101826
Alignment:
Q  14 aaaatatcatataaaacaagaaattattcaataccataaaaa-tttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtcc 112  Q
    |||| ||| |||||||||| |||||| ||||| ||||||||| |||||||| || |||| | |||| | |||  |||||||   || ||||||| |||||    
T  101951 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctaccttatattgtactgttctatcttatactgttctgtcc 101852  T
Q  113 agtatttacttttttgcaaaccaaac 138  Q
     ||| || || |||||||||||||||    
T  101851 ggtacttgctgttttgcaaaccaaac 101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 12639 - 12755
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| | |||||| ||||||| | || |||| || | |||||||  |||||||   |||||||||| | ||||||| || |    
T  12639 tataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgc 12738  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  12739 tgttttgcaaaccaaac 12755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 18157 - 18273
Alignment:
Q  23 tataaaacaagaaattattcaataccataaaa-atttgtcctttgttgttatgccttgtgttgggctgttctgcattgtactgttttgtccagtatttac 121  Q
    |||||||||| |||||| ||||| | |||||| ||||||| | || |||| || | |||||||  |||||||   |||||||||| | ||||||| || |    
T  18157 tataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgc 18256  T
Q  122 ttttttgcaaaccaaac 138  Q
    | |||||||||||||||    
T  18257 tgttttgcaaaccaaac 18273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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