View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18024_high_8 (Length: 363)
Name: NF18024_high_8
Description: NF18024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18024_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 20 - 349
Target Start/End: Complemental strand, 22701802 - 22701473
Alignment:
| Q |
20 |
tagtagtattagttttcttccttagcaatgtctctatggtactagatatttttgtttttcggtgcaattattgtttgaagttatttgactgcttattttg |
119 |
Q |
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| T |
22701802 |
tagtagtattagttttcttccttagcaatgtctctatggtactagatatttttgtttttcggtgcaattattgtttgaagttatttgactgcttattttg |
22701703 |
T |
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| Q |
120 |
tttcatatctctgcagacttgagtgttcaagcaatcactagttggttactatcgaaaacatttggggttcagaatgtgtcaattgttgcggaagaagatg |
219 |
Q |
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| T |
22701702 |
tttcatatctctgcagacttgagtgttcaagcaatcactagttggttactatcgaaaacatttggggttcagaatgtgtcaattgttgcggaagaagatg |
22701603 |
T |
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| Q |
220 |
tagaaactttcaccaaggatgattcaacaggcttactggaagctgttgtggatacagtcaatgagtctttagcttttgcatccatgtatggtctccaaag |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22701602 |
tagaaactttcaccaaggatgattcaacaggcttactggaagctgttgtggatacagtcaatgagtctttagcttttgcatccatgtatggtctccaaag |
22701503 |
T |
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| Q |
320 |
tccagacataactcttggaacatcagaagt |
349 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
22701502 |
tccagacataactcttggaacatcagaagt |
22701473 |
T |
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