View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18024_low_4 (Length: 445)
Name: NF18024_low_4
Description: NF18024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18024_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 5 - 332
Target Start/End: Complemental strand, 14701754 - 14701426
Alignment:
| Q |
5 |
gatataagatatgaagatgtaatgtaactcttttgacacaatgaagcatttatagttgaagttgaacactcataatcaatcatcttctcactttaatgat |
104 |
Q |
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| T |
14701754 |
gatataagatatgaagatgtaatgtaactcttttgacacaatgaagcatttatagttgaagttgaacactcataatcaatcatcttctcactttaatgat |
14701655 |
T |
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| Q |
105 |
ttttgagataatgctgattttcattcccggaaaccactccaacattgctatggatgtacgtggtttgtttgtannnnnnnnnnnngaggtc-actaatcc |
203 |
Q |
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| T |
14701654 |
ttttgagataatgctgattttcattcccggaaaccactccaacattgctaaggatgtacgtggtttgtttgtattttttatttttgaggtctactaatcc |
14701555 |
T |
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| Q |
204 |
tacaaaatcggcttgtaaggtgacgactatccacatccacatgtaacgattgtccaccgcttataaactcatttttagactttatcttatccaatgtgca |
303 |
Q |
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| T |
14701554 |
tacaaaaccggcttgtaaggtgacgactacccatatccacaggtgacgattgtccaccgcttataaactcatttttagactttatcttatccaatgtgca |
14701455 |
T |
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| Q |
304 |
ctcttaatacacactcctcatgccgacaa |
332 |
Q |
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| T |
14701454 |
ctcttaatacacactcctcacaccgacaa |
14701426 |
T |
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