View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18025_high_14 (Length: 469)
Name: NF18025_high_14
Description: NF18025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18025_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 394; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 15 - 456
Target Start/End: Original strand, 37216436 - 37216877
Alignment:
| Q |
15 |
acaaacaccactggactctccttgactacctttcatcgttactgaaccccattaagtctcctttgcacaacagaagaaaaaacaatacatgcacttccaa |
114 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
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| T |
37216436 |
acaaacaccaccggactctccttgactacctttcatcgttactgaaccccattaagtctcctttgcacagcagaagaaaaaacaatacacacacttccaa |
37216535 |
T |
|
| Q |
115 |
cattgggatcttgcagacactcctaactcaaccatccaccaacactagagatgtgtcatttcggcggacaagagagtaagcattgtcccaaacgacatga |
214 |
Q |
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|||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37216536 |
cattgggatcttgcagacgctcctaactcaaccatctaccaacactagggatgtgtcatttcggcggacaagagagtaagcattgtcccaaacgacatga |
37216635 |
T |
|
| Q |
215 |
aagaatccttgccaaactcttcgcaaaatgcccagtaaactaatcaacactaacctctttctcaacattgttatcctggtcttaccgaaaattctgcgct |
314 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
37216636 |
aagaatccttgccaaactctttgcaaaatgcccagtaaactaatcaacactaacctctttctcaacattgttatcctggtcttaccgaaaattccgcgct |
37216735 |
T |
|
| Q |
315 |
ttcacccacccattatttatctagtctccccttagccttagtacatttcataacctttttaataacggtgctcgtagctggcttaatagctacccaccct |
414 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37216736 |
ttcacccacccattatttatctagtctccccctagccttagtacatttcataacctttttaataacggtgctcgtagctggcttaatagctactcaccct |
37216835 |
T |
|
| Q |
415 |
ataactccaacactttatttaatgttgtagaatccgaatttc |
456 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37216836 |
ataactccaacactttatttaacgttgtagaatccgaatttc |
37216877 |
T |
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