View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18025_low_32 (Length: 288)
Name: NF18025_low_32
Description: NF18025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18025_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 39600622 - 39600353
Alignment:
| Q |
1 |
aaaataaattttaaaaactgtatgaacaaaggcaacatacatgaaattgaaaaaattatgacacattagtaaaactcagataacagaattaataatctac |
100 |
Q |
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| T |
39600622 |
aaaataaattttaaaaactgtatgaacaaaggcaacatacatgaaattgaaaaaattatgacacattagtaaaactcagataacagaattaatagtctac |
39600523 |
T |
|
| Q |
101 |
gagagagaactttcgactttttaatactacaaaattcttttttaatgcttcaggaatgggatcgagaacttcatttttcaatggttgatggagactttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39600522 |
gagagagaactttcgactttttaatactacaaaattcttttttaatgcttcaggaatgggatcgagaacttcatttttcaatggttgatggagactttaa |
39600423 |
T |
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| Q |
201 |
gaagtttgagggaaaatggtctgtaaaatctggaacaaggtagaacctatgtttcttaaagttaatactt |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39600422 |
gaagtttgagggaaaatggtctgtaaaatctggaacaaggtagaacctatgtttcttaaagttaatactt |
39600353 |
T |
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