View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18025_low_40 (Length: 248)

Name: NF18025_low_40
Description: NF18025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18025_low_40
NF18025_low_40
[»] chr3 (70 HSPs)
chr3 (1-234)||(362995-363226)
chr3 (1-66)||(33206809-33206874)
chr3 (1-66)||(42832040-42832105)
chr3 (1-66)||(46328902-46328967)
chr3 (1-63)||(27066662-27066724)
chr3 (1-66)||(14417920-14417985)
chr3 (1-66)||(30157054-30157119)
chr3 (1-66)||(45713532-45713597)
chr3 (1-66)||(50144584-50144649)
chr3 (6-66)||(34344756-34344816)
chr3 (1-48)||(49146136-49146183)
chr3 (1-63)||(35477783-35477845)
chr3 (1-66)||(36331704-36331769)
chr3 (1-66)||(39492873-39492938)
chr3 (1-66)||(43566774-43566839)
chr3 (1-66)||(43774237-43774302)
chr3 (1-66)||(47191425-47191490)
chr3 (1-66)||(48821016-48821081)
chr3 (5-66)||(53870890-53870951)
chr3 (1-49)||(2732715-2732763)
chr3 (5-65)||(28206516-28206576)
chr3 (1-48)||(24537879-24537926)
chr3 (1-55)||(16006495-16006549)
chr3 (1-63)||(48173338-48173400)
chr3 (1-66)||(13539942-13540007)
chr3 (1-66)||(15498258-15498323)
chr3 (5-66)||(17439943-17440004)
chr3 (1-66)||(32508772-32508837)
chr3 (1-66)||(40786332-40786397)
chr3 (1-66)||(49639080-49639145)
chr3 (1-66)||(50724419-50724484)
chr3 (1-66)||(50788364-50788429)
chr3 (1-66)||(54983683-54983748)
chr3 (1-65)||(3955360-3955424)
chr3 (2-66)||(18201455-18201519)
chr3 (1-65)||(42270992-42271056)
chr3 (1-48)||(335026-335073)
chr3 (1-66)||(10959185-10959250)
chr3 (1-66)||(24559441-24559506)
chr3 (1-66)||(27183659-27183724)
chr3 (1-63)||(35483321-35483383)
chr3 (1-66)||(13616053-13616117)
chr3 (1-66)||(20244186-20244251)
chr3 (5-66)||(27739829-27739890)
chr3 (1-66)||(36727441-36727506)
chr3 (1-66)||(38176106-38176171)
chr3 (1-66)||(47062045-47062110)
chr3 (1-65)||(8175812-8175876)
chr3 (1-65)||(20623756-20623820)
chr3 (1-33)||(24160539-24160571)
chr3 (1-65)||(37279679-37279743)
chr3 (1-45)||(46710875-46710919)
chr3 (1-49)||(48347267-48347315)
chr3 (1-48)||(23820681-23820728)
chr3 (1-60)||(48558738-48558797)
chr3 (1-66)||(9625035-9625100)
chr3 (21-63)||(24751512-24751554)
chr3 (1-66)||(36476411-36476476)
chr3 (14-48)||(53472690-53472724)
chr3 (1-35)||(54295258-54295292)
chr3 (1-66)||(18399630-18399695)
chr3 (3-66)||(24136728-24136793)
chr3 (1-66)||(31698585-31698650)
chr3 (21-62)||(36256661-36256702)
chr3 (21-66)||(47427795-47427840)
chr3 (20-61)||(49019254-49019295)
chr3 (2-50)||(16277945-16277993)
chr3 (1-33)||(22432922-22432954)
chr3 (1-45)||(45431679-45431722)
chr3 (1-45)||(49429512-49429555)
[»] chr2 (54 HSPs)
chr2 (1-66)||(44422159-44422224)
chr2 (1-66)||(34018048-34018113)
chr2 (1-64)||(3037602-3037665)
chr2 (1-64)||(8234772-8234835)
chr2 (1-66)||(580761-580826)
chr2 (1-66)||(11133128-11133193)
chr2 (1-66)||(17154701-17154766)
chr2 (1-65)||(20122454-20122518)
chr2 (1-66)||(3179376-3179441)
chr2 (1-66)||(19905633-19905698)
chr2 (2-66)||(7086306-7086370)
chr2 (1-65)||(17115523-17115587)
chr2 (2-66)||(32891334-32891398)
chr2 (1-63)||(9796949-9797011)
chr2 (1-63)||(11837041-11837103)
chr2 (1-66)||(1836640-1836705)
chr2 (1-66)||(22538591-22538656)
chr2 (1-66)||(30474173-30474238)
chr2 (1-66)||(36665482-36665547)
chr2 (1-65)||(15392190-15392254)
chr2 (1-45)||(41535241-41535285)
chr2 (13-64)||(2557563-2557614)
chr2 (19-66)||(31956937-31956984)
chr2 (1-66)||(2304342-2304407)
chr2 (2-48)||(16973961-16974007)
chr2 (1-63)||(31564141-31564203)
chr2 (1-66)||(18386790-18386855)
chr2 (9-66)||(29664663-29664720)
chr2 (1-66)||(44721682-44721747)
chr2 (1-65)||(2114414-2114478)
chr2 (9-65)||(33001532-33001588)
chr2 (1-44)||(2935869-2935912)
chr2 (11-66)||(14483635-14483690)
chr2 (1-48)||(16028104-16028151)
chr2 (2-49)||(17239954-17240001)
chr2 (1-48)||(20684016-20684063)
chr2 (2-48)||(18255674-18255720)
chr2 (1-66)||(34034402-34034467)
chr2 (1-66)||(43871005-43871070)
chr2 (1-63)||(1244621-1244685)
chr2 (1-66)||(9547105-9547170)
chr2 (21-66)||(11190077-11190122)
chr2 (1-34)||(29035028-29035061)
chr2 (5-66)||(34620574-34620635)
chr2 (1-62)||(36426838-36426899)
chr2 (20-65)||(38746186-38746231)
chr2 (1-66)||(41195920-41195985)
chr2 (1-66)||(45523717-45523782)
chr2 (1-45)||(10262791-10262835)
chr2 (1-49)||(11727385-11727433)
chr2 (1-66)||(12206550-12206617)
chr2 (1-45)||(20451855-20451899)
chr2 (1-49)||(26206320-26206368)
chr2 (1-66)||(44487743-44487810)
[»] chr1 (67 HSPs)
chr1 (1-66)||(37733807-37733872)
chr1 (2-66)||(19793579-19793643)
chr1 (1-66)||(15368857-15368922)
chr1 (1-66)||(46116152-46116217)
chr1 (1-66)||(11213427-11213492)
chr1 (1-66)||(11405508-11405573)
chr1 (1-66)||(15774290-15774355)
chr1 (1-66)||(34560316-34560381)
chr1 (1-66)||(42831999-42832064)
chr1 (1-66)||(47939177-47939242)
chr1 (2-66)||(35593816-35593880)
chr1 (1-66)||(3532952-3533017)
chr1 (1-66)||(8364386-8364451)
chr1 (1-66)||(21884627-21884692)
chr1 (1-66)||(39433410-39433475)
chr1 (1-66)||(49251373-49251438)
chr1 (1-66)||(12553246-12553313)
chr1 (1-48)||(23463982-23464029)
chr1 (1-66)||(17064245-17064310)
chr1 (1-66)||(32711122-32711187)
chr1 (1-66)||(9769556-9769623)
chr1 (1-61)||(11802003-11802063)
chr1 (6-66)||(38019925-38019985)
chr1 (1-48)||(1031639-1031686)
chr1 (19-66)||(11907277-11907324)
chr1 (1-63)||(538310-538372)
chr1 (4-66)||(37490945-37491007)
chr1 (1-47)||(39434670-39434716)
chr1 (5-66)||(9527482-9527543)
chr1 (1-66)||(30649145-30649210)
chr1 (9-66)||(39994826-39994883)
chr1 (1-66)||(48110581-48110646)
chr1 (1-66)||(50859345-50859410)
chr1 (1-65)||(4354084-4354148)
chr1 (1-65)||(4616925-4616989)
chr1 (1-49)||(6014513-6014561)
chr1 (1-66)||(9768785-9768852)
chr1 (1-65)||(22346471-22346535)
chr1 (1-66)||(50199452-50199519)
chr1 (1-48)||(18923881-18923928)
chr1 (1-65)||(41677112-41677178)
chr1 (3-66)||(3341712-3341777)
chr1 (14-48)||(23345053-23345087)
chr1 (1-66)||(32635192-32635258)
chr1 (1-66)||(40678875-40678940)
chr1 (1-66)||(749565-749629)
chr1 (21-66)||(3276432-3276477)
chr1 (5-66)||(4069588-4069649)
chr1 (1-66)||(4429460-4429525)
chr1 (1-66)||(16109998-16110063)
chr1 (1-66)||(17056858-17056923)
chr1 (1-34)||(17350113-17350146)
chr1 (21-66)||(20357531-20357576)
chr1 (21-66)||(20562379-20562424)
chr1 (1-66)||(23930522-23930587)
chr1 (1-34)||(29491522-29491555)
chr1 (1-34)||(38021304-38021337)
chr1 (1-34)||(39238768-39238801)
chr1 (1-66)||(50755397-50755461)
chr1 (1-45)||(19424098-19424141)
chr1 (1-45)||(23368732-23368775)
chr1 (1-45)||(25421906-25421950)
chr1 (1-65)||(27745209-27745273)
chr1 (1-33)||(33844669-33844701)
chr1 (1-33)||(33949277-33949309)
chr1 (5-48)||(41182830-41182874)
chr1 (1-66)||(50177222-50177289)
[»] scaffold0178 (1 HSPs)
scaffold0178 (1-63)||(4375-4437)
[»] chr5 (56 HSPs)
chr5 (1-63)||(42455375-42455437)
chr5 (1-66)||(29096286-29096351)
chr5 (2-66)||(6806618-6806682)
chr5 (1-66)||(29331295-29331360)
chr5 (5-66)||(30403806-30403867)
chr5 (1-66)||(32158392-32158457)
chr5 (1-65)||(10943768-10943832)
chr5 (1-65)||(38618660-38618724)
chr5 (1-63)||(20762333-20762395)
chr5 (1-66)||(843346-843411)
chr5 (1-66)||(1244705-1244770)
chr5 (1-66)||(18478055-18478120)
chr5 (1-66)||(19058982-19059047)
chr5 (1-66)||(36226113-36226178)
chr5 (2-66)||(2029106-2029170)
chr5 (1-48)||(8015887-8015934)
chr5 (1-62)||(6561950-6562011)
chr5 (1-66)||(3535912-3535979)
chr5 (2-66)||(29841401-29841465)
chr5 (13-61)||(33729842-33729890)
chr5 (19-66)||(9577363-9577410)
chr5 (1-64)||(33800945-33801008)
chr5 (1-66)||(18872573-18872636)
chr5 (1-66)||(5156949-5157014)
chr5 (1-62)||(9963468-9963529)
chr5 (5-66)||(15978655-15978716)
chr5 (1-63)||(17137846-17137910)
chr5 (1-66)||(18202071-18202136)
chr5 (1-66)||(20945869-20945934)
chr5 (1-66)||(43166721-43166786)
chr5 (5-65)||(6014835-6014895)
chr5 (1-61)||(27219546-27219606)
chr5 (1-66)||(28537187-28537254)
chr5 (23-66)||(38307724-38307767)
chr5 (1-66)||(1463923-1463988)
chr5 (1-66)||(4674793-4674858)
chr5 (1-66)||(20735153-20735218)
chr5 (1-66)||(36045112-36045177)
chr5 (19-65)||(41843728-41843774)
chr5 (1-66)||(7234850-7234915)
chr5 (1-66)||(10508632-10508697)
chr5 (1-66)||(13754058-13754123)
chr5 (1-30)||(20191493-20191522)
chr5 (1-66)||(23925595-23925660)
chr5 (1-66)||(29106016-29106081)
chr5 (13-66)||(29144206-29144259)
chr5 (1-46)||(42618411-42618456)
chr5 (1-65)||(3102106-3102170)
chr5 (13-49)||(4216810-4216846)
chr5 (1-45)||(7988900-7988944)
chr5 (1-65)||(9408929-9408993)
chr5 (1-33)||(12262990-12263022)
chr5 (6-59)||(19453931-19453988)
chr5 (1-45)||(26302493-26302537)
chr5 (1-66)||(34010587-34010654)
chr5 (1-45)||(35168632-35168675)
[»] chr7 (50 HSPs)
chr7 (1-66)||(34948158-34948223)
chr7 (1-63)||(21285334-21285396)
chr7 (5-66)||(14102517-14102578)
chr7 (5-66)||(14412534-14412595)
chr7 (1-66)||(29658250-29658315)
chr7 (1-66)||(33202532-33202597)
chr7 (1-66)||(22965936-22966001)
chr7 (1-66)||(38451915-38451980)
chr7 (1-66)||(47552265-47552330)
chr7 (3-55)||(8724434-8724486)
chr7 (10-65)||(8214171-8214226)
chr7 (12-66)||(47403566-47403620)
chr7 (1-66)||(2261462-2261527)
chr7 (5-66)||(4169132-4169193)
chr7 (5-66)||(5787517-5787578)
chr7 (1-62)||(30644221-30644282)
chr7 (1-66)||(38025393-38025458)
chr7 (1-62)||(42887206-42887267)
chr7 (2-66)||(3595340-3595404)
chr7 (3-66)||(17900857-17900920)
chr7 (1-48)||(33555121-33555168)
chr7 (2-65)||(45198077-45198140)
chr7 (5-59)||(38792268-38792322)
chr7 (1-63)||(43902517-43902579)
chr7 (13-66)||(2366421-2366474)
chr7 (1-66)||(4042246-4042311)
chr7 (1-66)||(22706006-22706071)
chr7 (2-47)||(31694123-31694168)
chr7 (1-66)||(35368448-35368513)
chr7 (1-60)||(25711114-25711174)
chr7 (1-45)||(25818338-25818382)
chr7 (1-45)||(28914877-28914920)
chr7 (13-65)||(29710080-29710132)
chr7 (1-65)||(45011637-45011701)
chr7 (11-66)||(27907874-27907929)
chr7 (1-48)||(30152793-30152840)
chr7 (12-66)||(22047583-22047637)
chr7 (20-66)||(25086928-25086974)
chr7 (1-63)||(37129340-37129402)
chr7 (1-66)||(46337845-46337911)
chr7 (1-66)||(17997716-17997781)
chr7 (1-34)||(19126789-19126822)
chr7 (5-66)||(42286380-42286441)
chr7 (9-66)||(44843751-44843808)
chr7 (1-66)||(4590589-4590656)
chr7 (1-48)||(8725133-8725181)
chr7 (1-33)||(16814749-16814781)
chr7 (1-61)||(22741257-22741317)
chr7 (1-65)||(29779033-29779097)
chr7 (2-66)||(46915017-46915080)
[»] chr6 (46 HSPs)
chr6 (1-66)||(25020506-25020571)
chr6 (1-63)||(16251504-16251566)
chr6 (1-66)||(9438354-9438419)
chr6 (1-66)||(9491713-9491778)
chr6 (1-66)||(12089149-12089214)
chr6 (2-66)||(12127887-12127951)
chr6 (1-66)||(3448404-3448469)
chr6 (1-66)||(5134412-5134477)
chr6 (1-66)||(18904661-18904726)
chr6 (1-66)||(22983632-22983697)
chr6 (1-66)||(23804711-23804776)
chr6 (2-66)||(3591307-3591371)
chr6 (1-65)||(7720482-7720546)
chr6 (1-65)||(31761206-31761270)
chr6 (1-63)||(35190815-35190877)
chr6 (1-66)||(2945648-2945713)
chr6 (1-66)||(10377102-10377167)
chr6 (1-66)||(19165403-19165467)
chr6 (1-66)||(22389728-22389793)
chr6 (5-66)||(30566114-30566175)
chr6 (1-48)||(12101938-12101985)
chr6 (1-66)||(2970241-2970306)
chr6 (1-66)||(6530182-6530247)
chr6 (2-59)||(19417875-19417932)
chr6 (1-65)||(29284170-29284234)
chr6 (1-66)||(34396135-34396200)
chr6 (1-45)||(7563575-7563619)
chr6 (1-49)||(15126294-15126342)
chr6 (19-66)||(5678195-5678242)
chr6 (2-48)||(6025383-6025428)
chr6 (1-63)||(6270590-6270652)
chr6 (1-66)||(14981680-14981745)
chr6 (2-48)||(18631525-18631571)
chr6 (1-47)||(23771085-23771131)
chr6 (1-34)||(6144016-6144049)
chr6 (1-66)||(6652261-6652326)
chr6 (1-66)||(9424496-9424560)
chr6 (9-66)||(10424513-10424570)
chr6 (1-66)||(19279501-19279566)
chr6 (1-66)||(19642527-19642590)
chr6 (1-62)||(26528619-26528680)
chr6 (1-34)||(33628951-33628984)
chr6 (1-33)||(17751348-17751380)
chr6 (14-66)||(18991420-18991471)
chr6 (14-66)||(22501084-22501136)
chr6 (1-65)||(34365787-34365851)
[»] chr4 (82 HSPs)
chr4 (1-62)||(28221289-28221350)
chr4 (1-66)||(12856236-12856301)
chr4 (1-66)||(20753103-20753168)
chr4 (2-66)||(31578070-31578134)
chr4 (1-48)||(34773679-34773726)
chr4 (1-63)||(3465635-3465697)
chr4 (1-66)||(3442895-3442960)
chr4 (1-66)||(17859830-17859895)
chr4 (1-66)||(30295565-30295630)
chr4 (1-66)||(30324467-30324532)
chr4 (1-66)||(33944341-33944406)
chr4 (1-66)||(38433363-38433428)
chr4 (1-66)||(41003150-41003215)
chr4 (2-66)||(22478718-22478782)
chr4 (1-61)||(36257746-36257806)
chr4 (2-66)||(41943960-41944024)
chr4 (1-65)||(53697959-53698023)
chr4 (7-66)||(30152172-30152231)
chr4 (1-60)||(30616052-30616111)
chr4 (1-48)||(47017942-47017989)
chr4 (1-63)||(36008327-36008389)
chr4 (2-48)||(37032175-37032221)
chr4 (1-66)||(9924908-9924973)
chr4 (1-66)||(36576316-36576381)
chr4 (5-66)||(49280647-49280708)
chr4 (1-66)||(56546427-56546492)
chr4 (2-66)||(1297906-1297970)
chr4 (2-66)||(10098178-10098242)
chr4 (5-65)||(12820384-12820444)
chr4 (1-49)||(13211347-13211395)
chr4 (1-65)||(15021477-15021541)
chr4 (1-49)||(26254004-26254052)
chr4 (2-66)||(29269293-29269357)
chr4 (1-61)||(32885740-32885800)
chr4 (1-65)||(44074905-44074969)
chr4 (1-48)||(10757771-10757818)
chr4 (1-48)||(10970942-10970989)
chr4 (1-66)||(5430342-5430408)
chr4 (1-66)||(8690266-8690331)
chr4 (1-66)||(9693014-9693079)
chr4 (1-66)||(14149845-14149910)
chr4 (5-66)||(20266918-20266980)
chr4 (1-66)||(28520709-28520774)
chr4 (2-48)||(31601859-31601905)
chr4 (1-66)||(48968188-48968253)
chr4 (1-63)||(56314813-56314875)
chr4 (1-66)||(9285637-9285702)
chr4 (1-66)||(31156198-31156263)
chr4 (2-55)||(34684621-34684674)
chr4 (1-66)||(37274632-37274697)
chr4 (12-61)||(39992898-39992947)
chr4 (1-66)||(43143772-43143837)
chr4 (1-66)||(52560816-52560881)
chr4 (9-66)||(53291502-53291559)
chr4 (1-66)||(54304907-54304972)
chr4 (19-63)||(534745-534789)
chr4 (1-61)||(11039919-11039979)
chr4 (19-63)||(27584039-27584083)
chr4 (1-57)||(45141220-45141276)
chr4 (1-49)||(45350328-45350376)
chr4 (1-49)||(45359807-45359855)
chr4 (1-45)||(48512251-48512295)
chr4 (1-45)||(49089276-49089320)
chr4 (19-66)||(2487357-2487404)
chr4 (1-48)||(3544428-3544475)
chr4 (1-48)||(6637718-6637765)
chr4 (5-48)||(24234070-24234113)
chr4 (2-61)||(31480324-31480383)
chr4 (1-44)||(35747482-35747525)
chr4 (1-61)||(49039426-49039488)
chr4 (1-66)||(42411431-42411497)
chr4 (1-66)||(53354944-53355009)
chr4 (1-66)||(53815748-53815813)
chr4 (13-66)||(548865-548918)
chr4 (1-34)||(7768798-7768831)
chr4 (9-66)||(13073133-13073190)
chr4 (1-66)||(21476059-21476124)
chr4 (1-49)||(4045063-4045111)
chr4 (9-45)||(6330935-6330971)
chr4 (12-48)||(31152581-31152617)
chr4 (1-45)||(37889606-37889649)
chr4 (1-33)||(55677157-55677189)
[»] chr8 (67 HSPs)
chr8 (1-66)||(8682433-8682498)
chr8 (1-66)||(14683928-14683993)
chr8 (1-66)||(15042343-15042408)
chr8 (1-66)||(4798519-4798584)
chr8 (1-66)||(24074558-24074623)
chr8 (1-66)||(25689366-25689431)
chr8 (1-66)||(36359696-36359761)
chr8 (1-66)||(43468683-43468748)
chr8 (1-48)||(34073235-34073282)
chr8 (1-55)||(5184876-5184930)
chr8 (1-66)||(9737340-9737403)
chr8 (1-66)||(28378864-28378930)
chr8 (1-66)||(7649580-7649645)
chr8 (1-66)||(10184779-10184844)
chr8 (1-66)||(14010750-14010815)
chr8 (1-66)||(17987427-17987492)
chr8 (5-66)||(23239180-23239241)
chr8 (1-66)||(43874955-43875020)
chr8 (1-65)||(30542816-30542880)
chr8 (2-66)||(37154567-37154631)
chr8 (1-66)||(40249856-40249923)
chr8 (1-45)||(42761864-42761908)
chr8 (1-48)||(33570425-33570472)
chr8 (1-48)||(33982242-33982289)
chr8 (1-66)||(2696585-2696650)
chr8 (1-66)||(2800071-2800136)
chr8 (1-66)||(7314785-7314850)
chr8 (1-66)||(3379626-3379690)
chr8 (1-66)||(9525009-9525074)
chr8 (1-66)||(10970318-10970383)
chr8 (1-66)||(13762490-13762555)
chr8 (1-66)||(14684194-14684259)
chr8 (1-66)||(23857301-23857366)
chr8 (1-66)||(24608461-24608526)
chr8 (1-66)||(33524448-33524513)
chr8 (1-66)||(39258632-39258697)
chr8 (1-66)||(41125412-41125476)
chr8 (1-61)||(7603789-7603849)
chr8 (1-61)||(39484353-39484413)
chr8 (1-48)||(6064429-6064476)
chr8 (1-48)||(10199738-10199785)
chr8 (1-48)||(10309656-10309703)
chr8 (5-48)||(11823018-11823061)
chr8 (19-66)||(37128798-37128845)
chr8 (2-49)||(42688109-42688156)
chr8 (1-48)||(44070364-44070411)
chr8 (1-63)||(8740637-8740699)
chr8 (1-66)||(22426453-22426518)
chr8 (1-56)||(22438570-22438627)
chr8 (1-66)||(31129354-31129419)
chr8 (32-66)||(34632065-34632099)
chr8 (1-66)||(38790550-38790615)
chr8 (1-47)||(44136274-44136320)
chr8 (1-66)||(13702330-13702395)
chr8 (13-66)||(27558849-27558902)
chr8 (1-66)||(220338-220405)
chr8 (1-66)||(689493-689560)
chr8 (1-66)||(733961-734028)
chr8 (1-66)||(857857-857924)
chr8 (1-41)||(8034582-8034622)
chr8 (1-45)||(13537310-13537354)
chr8 (1-45)||(13626858-13626902)
chr8 (1-45)||(14012664-14012708)
chr8 (1-45)||(19957321-19957364)
chr8 (20-60)||(30461607-30461647)
chr8 (1-45)||(30942598-30942642)
chr8 (1-65)||(44923276-44923340)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-65)||(166648-166712)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-63)||(26812-26874)
scaffold0009 (1-65)||(108340-108404)
[»] scaffold1086 (1 HSPs)
scaffold1086 (5-66)||(2544-2605)
[»] scaffold0533 (1 HSPs)
scaffold0533 (1-66)||(9378-9443)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-66)||(49872-49937)
[»] scaffold0021 (1 HSPs)
scaffold0021 (2-63)||(111679-111740)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-61)||(1473-1533)
[»] scaffold1990 (1 HSPs)
scaffold1990 (1-48)||(946-993)
[»] scaffold0229 (1 HSPs)
scaffold0229 (1-48)||(22476-22522)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-48)||(47313-47360)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-55)||(8612-8666)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-66)||(7128-7193)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-34)||(17941-17974)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-66)||(101883-101948)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-66)||(43675-43740)
[»] scaffold0002 (1 HSPs)
scaffold0002 (9-66)||(440459-440518)


Alignment Details
Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 362995 - 363226
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgacnnnnnnnnnnnnn-taaataatgtattgattttt 99  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||              ||||||||||||||||||||    
T  362995 gttcgaaccccggataccccacttattcactttataaggtgaattctaatcactaggctatctgacaaaaaaaataaaaataaataatgtattgattttt 363094  T
Q  100 ggaatggttaattaatgttaannnnnnnnnnnngacaaaattattgttaatttatgtaatcgaaattttaccgtacttaaataagttttaggaaataaat 199  Q
    |||||||||||||||||||||            |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  363095 ggaatggttaattaatgttaattttttttt---gacaaaattaatgttaatttatgtaatcgaaattttaccgtacttaaataatttttaggaaataaat 363191  T
Q  200 taaatatttgtagaatgactaaaatattattacat 234  Q
    ||||||||| |||||||||||||||||||||||||    
T  363192 taaatatttatagaatgactaaaatattattacat 363226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33206809 - 33206874
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  33206809 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 33206874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42832105 - 42832040
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||    
T  42832105 gttcgaaccccggacactccatttattcaccttataaggtgaattctagccactaggctacctgac 42832040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46328967 - 46328902
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  46328967 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 46328902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27066662 - 27066724
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||    
T  27066662 gttcgaaccccggacaccccacttattcaccttatgaggtgaattctagtcactaggctacct 27066724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14417920 - 14417985
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  14417920 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacctgac 14417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30157054 - 30157119
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||| ||||    
T  30157054 gttcgaaccccggacacccaacttattcaccttataaggtgaattctaaccactaggctacttgac 30157119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45713532 - 45713597
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||    
T  45713532 gttcgaactccggacaccccacttattcaccttataaggtgaattctaactactaggctacctgac 45713597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50144649 - 50144584
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  |||||| ||| |||||    
T  50144649 gttcgaaccccggacactccacttattcaccttataaggtgaattctacccactagactatctgac 50144584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 34344816 - 34344756
Alignment:
Q  6 aaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  34344816 aaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 34344756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 49146136 - 49146183
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49146136 gttcgaaccccggacaccccacttattcactttataaggtgaattcta 49146183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35477783 - 35477845
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||    
T  35477783 gttcgaactccggacaccccacttattcaccttataaggtgaattctagtcattaggctacct 35477845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36331769 - 36331704
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||  |||||| |||||||||    
T  36331769 gttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactagactacctgac 36331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39492873 - 39492938
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| ||||||||| || |||||||||||||||||| ||||| ||||||||||    
T  39492873 gttcgaaccccagacaccccacttatttacgttataaggtgaattctaaccactaagctacctgac 39492938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43566839 - 43566774
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  43566839 gttcgaacctcagacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 43566774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43774237 - 43774302
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  43774237 gttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactaggttacctgac 43774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47191425 - 47191490
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| ||||||| |||||||||  ||||||||||||||||    
T  47191425 gttcgaaccccgaacaccccacttattcaccttataagatgaattctagccactaggctacctgac 47191490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48821016 - 48821081
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| || ||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  48821016 gttcgaacctcgaacacttcacttattcaccttataaggtgaattttaaccactaggctacctgac 48821081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 53870890 - 53870951
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  53870890 gaactccggacaccccacttattcacattataaggtgaattctagtcattaggctacctgac 53870951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2732715 - 2732763
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  2732715 gttcgaaccccggacaccccacttattcaccttataaggtgaattctaa 2732763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 28206576 - 28206516
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||| |||||  |||||||||||| |||||||||||||||||| |||||||||||||||    
T  28206576 gaaccctggacatcccacttattcaccttataaggtgaattctaaccactaggctacctga 28206516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24537879 - 24537926
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  24537879 gttcgaaccccggacaccccacttattcaccttataaggtgaattcta 24537926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16006549 - 16006495
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcacta 55  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||| |||||    
T  16006549 gttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccacta 16006495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48173338 - 48173400
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||  ||||| |||||||    
T  48173338 gttcgaaccccggacacctcacttattcaccttataaggtgaattctagccactaagctacct 48173400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13540007 - 13539942
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||||  || ||| |||||||||    
T  13540007 gttcgaaccccggacaccccacttatttaccttataaggtgaattctagccattagactacctgac 13539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15498258 - 15498323
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| ||||||||||||  |||||| ||||||||||  |||||||||| |||||    
T  15498258 gttcgaaccccggacattccacttattcatcttataatgtgaattctagacactaggctatctgac 15498323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 17440004 - 17439943
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||| |||| || |||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  17440004 gaacctcggataccccacttattcaccttataaggtgaattttaaccactaggctacctgac 17439943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32508837 - 32508772
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||  ||||| | ||||||||    
T  32508837 gttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaagttacctgac 32508772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40786332 - 40786397
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | ||| | |||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  40786332 gttcgaacctcagacgccccacttattctctttataaggtgaattctaaccactaggctacttgac 40786397  T

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Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49639080 - 49639145
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| || ||||||||||||||  ||||||| ||||||||    
T  49639080 gttcgaaccccgaacaccccacttattcaccttgtaaggtgaattctagccactaggttacctgac 49639145  T

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Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50724419 - 50724484
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||| ||| || ||||||||||  ||||||||||||||||    
T  50724419 gttcgaacctcggacaccccacttattcaccttaaaaagtgaattctagccactaggctacctgac 50724484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50788429 - 50788364
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||| ||| || ||||||||||  ||||||||||||||||    
T  50788429 gttcgaacctcggacaccccacttattcaccttaaaaagtgaattctagccactaggctacctgac 50788364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 54983748 - 54983683
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||  |||||  |||||||||    
T  54983748 gttcgaaccccggacaccccatttattcaccttataaggtgaattctagccactaaactacctgac 54983683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3955360 - 3955424
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||  |||||  ||||||||    
T  3955360 gttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactaaactacctga 3955424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 18201519 - 18201455
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| | |||||||||| |||||||||||||||||  | ||||| ||||||||    
T  18201519 ttcgaaccccggacaccctacttattcaccttataaggtgaattctagccgctaggttacctgac 18201455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42271056 - 42270992
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||| |||||||| | |||||||||| |||||||||||||||||   ||||||||||||||    
T  42271056 gttcgaactccggacaccctacttattcaccttataaggtgaattctagctactaggctacctga 42270992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 335073 - 335026
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||    
T  335073 gttcgaaccctggacaccccacttattcaccttataaggtgaattcta 335026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10959185 - 10959250
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| ||||| ||||||| |||||||||    
T  10959185 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagtcactagactacctgac 10959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24559441 - 24559506
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||| ||||||| ||||||||    
T  24559441 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctaaccactaggttacctgac 24559506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27183724 - 27183659
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  27183724 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 27183659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35483321 - 35483383
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||| ||||||||| |||||||||||| ||||||||| |||||||  |||||| ||||||    
T  35483321 gttcgaatcccggacaccccacttattcaccttataaggtaaattctagccactagactacct 35483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13616117 - 13616053
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||  |||||||||||||||||  ||||| ||||||||||    
T  13616117 gttcgaacctcggacaccccacttattcatcttataaggtgaattctagccacta-gctacctgac 13616053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20244186 - 20244251
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||||||| || ||| | |||||||    
T  20244186 gttcgaaccccggatacttcacgtattcaccttataaggtgaattctaaccattagaccacctgac 20244251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 27739829 - 27739890
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| ||| |||||||| |||||||||||| ||||  |||||| |||||||||    
T  27739829 gaaccccggacaccccatttattcacattataaggtgaactctagccactagtctacctgac 27739890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36727506 - 36727441
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||  |||||||||||||||||  ||||| | ||||||||    
T  36727506 gttcgaacctcggacaccccacttattcatcttataaggtgaattctagccactaagttacctgac 36727441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38176106 - 38176171
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||  |||||||||||| ||||||||| || |||||  |||||||||||||||    
T  38176106 gttcgaaccccagacagcccacttattcaccttataaggttaaatctaactactaggctacctgac 38176171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47062110 - 47062045
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| |||||  || ||||| |||||||    
T  47062110 gttcgaaccccggacaccccatttattaactttataaggtgagttctagccaataggcaacctgac 47062045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8175812 - 8175876
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||| ||| |||| |||||||||||| |||||||||||||||||  ||| || ||||||||    
T  8175812 gttcgaactccgaacaccccacttattcaccttataaggtgaattctagccaccagactacctga 8175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20623820 - 20623756
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||| | |||||| |||||||||||| |||||||||||||||||  ||||| ||| |||||    
T  20623820 gttcgaactcaggacaccccacttattcaccttataaggtgaattctagccactaagctgcctga 20623756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24160571 - 24160539
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  24160571 gttcgaaccccggacactccacttattcacttt 24160539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37279679 - 37279743
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||| || ||||| |||||||||||| |||||||||||||| || ||||||  ||||||||    
T  37279679 gttcgaactccagacaccccacttattcaccttataaggtgaattatagtcactaaactacctga 37279743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46710919 - 46710875
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||    
T  46710919 gttcgaacctcagacaccccacttattcactttataaggtgaatt 46710875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48347315 - 48347267
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||||||||    
T  48347315 gttcgaacctcagacaccccacttattcattttataaggtgaattctaa 48347267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 23820681 - 23820728
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||| ||||| |||||||||||  |||||||||||||||||    
T  23820681 gttcgaaccccagacaccccacttattcatcttataaggtgaattcta 23820728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48558738 - 48558797
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggcta 60  Q
    ||||||||| || |||  ||||||||||||||||||||||||||| ||  ||||||||||    
T  48558738 gttcgaacctcgaacatcccacttattcactttataaggtgaattatagccactaggcta 48558797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9625035 - 9625100
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  |||||| |||||||||    
T  9625035 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactagactacctgac 9625100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 24751512 - 24751554
Alignment:
Q  21 acttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||| |||||||||||||||||  |||||||||||||    
T  24751512 acttattcaccttataaggtgaattctagccactaggctacct 24751554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36476411 - 36476476
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt-ctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||||||| || ||||||| |||  ||||||||||||||||    
T  36476411 gttcgaaccccgaacaccccacttattcacttta-aaagtgaattcctagccactaggctacctgac 36476476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 53472690 - 53472724
Alignment:
Q  14 acactccacttattcactttataaggtgaattcta 48  Q
    |||| ||||||||||||||||||||||||||||||    
T  53472690 acaccccacttattcactttataaggtgaattcta 53472724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 54295258 - 54295292
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttat 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  54295258 gttcgaacctcggacactccacttattcactttat 54295292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18399695 - 18399630
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| | ||| |||||| ||| |||||||||||||  |||||| |||| ||||    
T  18399695 gttcgaaccccggacacgctactcattcaccttaaaaggtgaattctagccactagactacttgac 18399630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 24136793 - 24136728
Alignment:
Q  3 tcgaaccccggacactccacttattcacttt-ataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||| ||||||||||||||| | |||||||| |||||  ||||||||||| ||||    
T  24136793 tcgaaccccggacaccccacttattcactttaaaaaggtgaatttctagccactaggctacttgac 24136728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31698585 - 31698650
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| || |||| |||||||||||  |||||||||||||||||  |||||| ||| |||||    
T  31698585 gttcgaacctcgaacaccccacttattcatcttataaggtgaattctagccactagactatctgac 31698650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 36256702 - 36256661
Alignment:
Q  21 acttattcactttataaggtgaattctaatcactaggctacc 62  Q
    |||||||||| |||||||||||||||||  ||||||||||||    
T  36256702 acttattcaccttataaggtgaattctagccactaggctacc 36256661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 47427795 - 47427840
Alignment:
Q  21 acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| ||||||||||||| |||| ||||| ||||||||||    
T  47427795 acttattcaccttataaggtgaatactaaccactaagctacctgac 47427840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 49019254 - 49019295
Alignment:
Q  20 cacttattcactttataaggtgaattctaatcactaggctac 61  Q
    ||||||||||| |||||||||||||||||| |||||| ||||    
T  49019254 cacttattcaccttataaggtgaattctaaccactagactac 49019295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 16277993 - 16277945
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaat 50  Q
    ||||||| |||||||  |||||||||||| ||||||| |||||||||||    
T  16277993 ttcgaactccggacatcccacttattcaccttataagatgaattctaat 16277945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22432954 - 22432922
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    |||| ||||||||||||||||||||||||||||    
T  22432954 gttcaaaccccggacactccacttattcacttt 22432922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45431679 - 45431722
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  45431679 gttcgaaccccggacaccccacttattcacctt-taaggtgaatt 45431722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49429512 - 49429555
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  49429512 gttcgaaccccggacaccccacttattcacctt-taaggtgaatt 49429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44422159 - 44422224
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  44422159 gttcgaaccccggacaccccacttattcactttataaggtaaattctaaccactaggctacctgac 44422224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34018113 - 34018048
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  34018113 gttcgaacctcggacaccccacttattcaccttataaggtgaattctaaccactaggctacctgac 34018048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3037665 - 3037602
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctg 64  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||    
T  3037665 gttcgaaccccggacaccccacttattcaccttataaggtgaattctaggcactaggctacctg 3037602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8234835 - 8234772
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctg 64  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||    
T  8234835 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctg 8234772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 580826 - 580761
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||  ||||||||||||||||    
T  580826 gttcgaaccccggacaccccacttattcaccttataagatgaattctagccactaggctacctgac 580761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11133128 - 11133193
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  11133128 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggttacctgac 11133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17154701 - 17154766
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||  ||||||||||||||||    
T  17154701 gttcgaaccccggacaccccacttattcaccttataaggtgagttctagccactaggctacctgac 17154766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20122518 - 20122454
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||  |||||||||||||||    
T  20122518 gttcgaaccccggacacgccacttattcatcttataaggtgaattctagccactaggctacctga 20122454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3179376 - 3179441
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  3179376 gttcgaacctcagacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 3179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19905698 - 19905633
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||  || |||||||||||||    
T  19905698 gttcgaaccccggacacccgacttattcaccttataaggtgaattctagccattaggctacctgac 19905633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 7086306 - 7086370
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| |||| ||| |||||||| |||||||||||||||||| |||||| |||||||||    
T  7086306 ttcgaaccccgaacaccccaattattcaccttataaggtgaattctaaccactagactacctgac 7086370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17115587 - 17115523
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||   ||||||||||||||    
T  17115587 gttcgaaccccggacatcccatttattcactttataaggtgaattctagcaactaggctacctga 17115523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 32891334 - 32891398
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| |||||||||||  ||||||| |||||||||  ||||||||||||||||    
T  32891334 ttcgaaccccggacaccccacttattcatcttataagatgaattctagccactaggctacctgac 32891398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9796949 - 9797011
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||  |||||| ||||||    
T  9796949 gttcgaaccccggacaccccacttattcatcttataaggtgaattctagacactagcctacct 9797011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11837041 - 11837103
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||||||||  ||||||||||| |||||| ||||||||||  |||||||||||||    
T  11837041 gttcgaaccccggacacctcacttattcaccttataaagtgaattctagccactaggctacct 11837103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1836640 - 1836705
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| | ||||||||||  ||||||||||||||||  |||||||||| |||||    
T  1836640 gttcgaaccccggacaccctacttattcaccatataaggtgaattctagccactaggctatctgac 1836705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22538591 - 22538656
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||| ||||  ||||||||||| |||||||||||||||||  ||||||||||||||||    
T  22538591 gttcgaatcccgaacacctcacttattcaccttataaggtgaattctagccactaggctacctgac 22538656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30474238 - 30474173
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||  |||| || ||||||||    
T  30474238 gttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactgggttacctgac 30474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36665482 - 36665547
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||||  ||||| | ||||||||    
T  36665482 gttcgaacctcggacaccccacttattcattttataaggtgaattctatccactaagttacctgac 36665547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15392254 - 15392190
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||| |||||||  |||||||||||||||||||||| ||| ||  |||||||||||||||    
T  15392254 gttcgaacctcggacacctcacttattcactttataaggtgtattttagccactaggctacctga 15392190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41535241 - 41535285
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  41535241 gttcgaaccccggataccccacttattcactttataaggtgaatt 41535285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 2557614 - 2557563
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaatcactaggctacctg 64  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| ||||||    
T  2557614 gacactccacttattcaccttataaggtgaattctagccactaggttacctg 2557563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 31956937 - 31956984
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  31956937 ccacttattcacgttataaggtgaattctaaccaccaggctacctgac 31956984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2304342 - 2304407
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||| |||||| || ||||| |||||| ||||||||||||||||    
T  2304342 gttcgaaccccggacaccccacttatttacttta-aaagtgaatttctaaccactaggctacctgac 2304407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 16973961 - 16974007
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  16973961 ttcgaaccccggacaccccacttatttaccttataaggtgaattcta 16974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31564141 - 31564203
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||||| || |||||||||||| ||||||| |||||||||  |||||| ||||||    
T  31564141 gttcgaaccccggaaaccccacttattcaccttataagatgaattctagccactagactacct 31564203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18386855 - 18386790
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| |||||||||||| ||||||| |||||||||  | ||||||||| ||||    
T  18386855 gttcgaactccggacaccccacttattcaccttataagatgaattctagccgctaggctacttgac 18386790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 29664663 - 29664720
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| |||||||||||  |||||||||||||||||  |||||| |||||||||    
T  29664663 cccggacaccccacttattcatcttataaggtgaattctagccactagactacctgac 29664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44721747 - 44721682
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| ||| |||||||| |||||||||||||||||  ||||||| || |||||    
T  44721747 gttcgaacctcggacaccccatttattcaccttataaggtgaattctagccactaggttatctgac 44721682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2114478 - 2114414
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||||||||  || |||||||| |||||||||||||||||  |||| | ||||||||    
T  2114478 gttcgaaccccggacacctcatttattcaccttataaggtgaattctagccactggactacctga 2114414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 33001588 - 33001532
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||| |||||||||||  |||||||||||||||||   ||||||||||||||    
T  33001588 cccggacaccccacttattcatcttataaggtgaattctagctactaggctacctga 33001532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2935869 - 2935912
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaat 44  Q
    ||||||||| ||||||| || |||||||||||||||||||||||    
T  2935869 gttcgaacctcggacaccccgcttattcactttataaggtgaat 2935912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 14483690 - 14483635
Alignment:
Q  11 cggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||||||||||  |||||||||||||||||| || ||| |||||||||    
T  14483690 cggacaccccacttattcatcttataaggtgaattctaaccaatagactacctgac 14483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16028151 - 16028104
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||||    
T  16028151 gttcgaactccagacatcccacttattcactttataaggtgaattcta 16028104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 17239954 - 17240001
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    |||||||| ||||||| |||||||||||  ||||||||||||||||||    
T  17239954 ttcgaacctcggacaccccacttattcatcttataaggtgaattctaa 17240001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20684016 - 20684063
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||| ||||  ||||||||||| |||||||||||||||||    
T  20684016 gttcgaaccccgaacacgtcacttattcaccttataaggtgaattcta 20684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 18255674 - 18255720
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||| ||||||| |||||||||||| ||||||| |||||||||    
T  18255674 ttcgaacctcggacaccccacttattcacattataagatgaattcta 18255720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34034402 - 34034467
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  |||||| |||||||||    
T  34034402 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactagactacctgac 34034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43871005 - 43871070
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  43871005 gttcgaatcccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 43871070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1244621 - 1244685
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacct 63  Q
    ||||||||||||||||| |||||||||||| ||  | |||||||||||||  |||||| ||||||    
T  1244621 gttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagccactagactacct 1244685  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9547170 - 9547105
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||| |||| |||||||||||  |||||||||||||||||  || ||| |||||||||    
T  9547170 gttcgaatcccgaacaccccacttattcatcttataaggtgaattctagccaatagactacctgac 9547105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 11190122 - 11190077
Alignment:
Q  21 acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| ||||||| |||||||||  ||||||||||||||||    
T  11190122 acttattcaccttataagatgaattctagccactaggctacctgac 11190077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29035028 - 29035061
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  29035028 gttcgaaccccggacaccccacttattcacttta 29035061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 34620574 - 34620635
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||| | |||||||| |||||||||||||||||  |||||| |||| ||||    
T  34620574 gaaccccagacactctatttattcaccttataaggtgaattctagccactagactacttgac 34620635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36426899 - 36426838
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacc 62  Q
    |||||||| ||| |||| |||||||||||  |||||||||||||||||  ||||| ||||||    
T  36426899 gttcgaactccgaacaccccacttattcatcttataaggtgaattctagccactatgctacc 36426838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 38746186 - 38746231
Alignment:
Q  20 cacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||||| | ||||||| ||||||| ||||||||    
T  38746186 cacttattcactttataagataaattctagtcactagactacctga 38746231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41195985 - 41195920
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||| ||||  || |||||||| | |||||||||||||||  ||||||||||||||||    
T  41195985 gttcgaatcccgaacacctcatttattcacctaataaggtgaattctagccactaggctacctgac 41195920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45523717 - 45523782
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||  ||||  ||| ||||||| |||||||||||||||||| |||||  |||||||||    
T  45523717 gttcgaaccccaaacacctcacctattcaccttataaggtgaattctaaccactaaactacctgac 45523782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10262791 - 10262835
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||| ||||| |||||||||||| |||||| |||||||    
T  10262791 gttcgaaccccagacaccccacttattcaccttataaagtgaatt 10262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11727385 - 11727433
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    |||||||||||  |||| |||||||||||| |||||| |||||||||||    
T  11727385 gttcgaaccccaaacaccccacttattcaccttataaagtgaattctaa 11727433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12206550 - 12206617
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| || ||||||||| ||  | |||||||||||||  ||||||||||||||||    
T  12206550 gttcgaaccccgaacaccccgcttattcaccttgaaaaaggtgaattctagccactaggctacctgac 12206617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20451899 - 20451855
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||||||||||  ||||||||||||||||||||| || |||||||    
T  20451899 gttcgaaccccaaacactccacttattcactttaaaaagtgaatt 20451855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26206368 - 26206320
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||||| || |||| |||||||||||| ||||||| ||||||||||    
T  26206368 gttcgaacctcgaacaccccacttattcaccttataagttgaattctaa 26206320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44487810 - 44487743
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||  |||||||||||| ||  | |||||||||||||| |||||  |||||||||    
T  44487810 gttcgaaccccggacatcccacttattcaccttaaaaaaggtgaattctaaccactaacctacctgac 44487743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37733807 - 37733872
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  37733807 gttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggctacctgac 37733872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 19793579 - 19793643
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19793579 ttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggctacctgac 19793643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15368857 - 15368922
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  15368857 gttcgaaccccggacaccccacttattcattttataaggtgaattctagccactaggctacctgac 15368922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46116217 - 46116152
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  46116217 gttcgaaccccggacaccccaattattcaccttataaggtgaattctaaccactaggctacctgac 46116152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11213492 - 11213427
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||| |||||||||    
T  11213492 gttcgaaccccggacaccccacttatttactttataaggtgaattctagtcaatagactacctgac 11213427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11405508 - 11405573
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  11405508 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacctgac 11405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15774355 - 15774290
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  15774355 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacctgac 15774290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34560381 - 34560316
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  34560381 gttcgaacctcggacaccccacttattcaccttataaggtgaattctagtcactagactacctgac 34560316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42831999 - 42832064
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  42831999 gttcaaaccccggacaccccacttattcaccttataaggtgaattctagtcactaggctatctgac 42832064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47939242 - 47939177
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  47939242 gttcgaactccggacaccccacttattcaccttattaggtgaattctaaccactaggctacctgac 47939177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 35593816 - 35593880
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||||||||    
T  35593816 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccgctaggctacctgac 35593880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3533017 - 3532952
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||   |||||||||||||||    
T  3533017 gttccaaccccggacaccccacttattcaccttataaggtgaattctagctactaggctacctgac 3532952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8364451 - 8364386
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| || | |||||||||||| || |||||||||||||| |||||||||||||||||    
T  8364451 gttcgaaccccgaacgccccacttattcaccttttaaggtgaattctagtcactaggctacctgac 8364386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21884627 - 21884692
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||| |||||| |||| ||||    
T  21884627 gttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccactagactacatgac 21884692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39433410 - 39433475
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||  ||||||||| ||||||    
T  39433410 gttcgaacctcggacaccccacttattcaccttataaggtgaattctagccactaggctgcctgac 39433475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49251438 - 49251373
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||| ||||||||||| ||||||| ||||||||    
T  49251438 gttcgaaccccagacaccccacttattcaccttataatgtgaattctaaccactaggttacctgac 49251373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12553246 - 12553313
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||||||  ||||||||||||||||    
T  12553246 gttcgaaccccggacaccccacttattcactttgaaaaaggtgaattctagccactaggctacctgac 12553313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23464029 - 23463982
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  23464029 gttcgaaccccggacaccccacttgttcactttataaggtgaattcta 23463982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17064310 - 17064245
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||||  || |||||||||||||    
T  17064310 gttcgaaccactgacaccccacttattcacgttataaggtgaattctatccattaggctacctgac 17064245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32711187 - 32711122
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||  |||||| ||| |||||    
T  32711187 gttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactagactatctgac 32711122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9769623 - 9769556
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||  | |||||||||||||| ||||| ||||||||||    
T  9769623 gttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctaaccactaagctacctgac 9769556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11802063 - 11802003
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    |||||||||||||||||| || |||||||| ||||||||| ||||||| ||||||| ||||    
T  11802063 gttcgaaccccggacacttcatttattcacgttataaggtaaattctagtcactagactac 11802003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 38019985 - 38019925
Alignment:
Q  6 aaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||| ||||| |||||||||||| |||||| ||||||||||  ||||||||||||||||    
T  38019985 aaccccagacaccccacttattcaccttataaagtgaattctagccactaggctacctgac 38019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1031639 - 1031686
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  1031639 gttcgaaccccgaacaccccacttattcaccttataaggtgaattcta 1031686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 11907324 - 11907277
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||    
T  11907324 ccacttattcatattataaggtgaattctaaccactaggctacctgac 11907277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 538372 - 538310
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||| |||| |||||||||||| ||||||| |||||||||  || ||||||||||    
T  538372 gttcgaaccccgaacaccccacttattcaccttataagatgaattctagacaataggctacct 538310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 37490945 - 37491007
Alignment:
Q  4 cgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||| ||||||| || ||||||||  |||||||||||||||||  ||||||||||||||||    
T  37490945 cgaaccacggacaccccgcttattcatcttataaggtgaattctagccactaggctacctgac 37491007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39434670 - 39434716
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattct 47  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  39434670 gttcgaacctcggacaccccacttattcaccttataaggtgaattct 39434716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 9527482 - 9527543
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||| |||||| |||||||||||  |||||||||||||||||  |||||| |||||||||    
T  9527482 gaaccctggacaccccacttattcatcttataaggtgaattctagccactagactacctgac 9527543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30649145 - 30649210
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||| ||||||||||  ||| | ||||||||||    
T  30649145 gttcgaaccccagacaccccacttattcaccttataacgtgaattctagccacaatgctacctgac 30649210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 39994883 - 39994826
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||  |||||||||||| |||||||||||||||||  |||||||||| |||||    
T  39994883 cccggacatcccacttattcaccttataaggtgaattctagccactaggctatctgac 39994826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48110581 - 48110646
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| |||||||  ||||||||||  |||||||||||| ||||  ||||||||||||||||    
T  48110581 gttcgaacctcggacacctcacttattcatcttataaggtgaaatctagccactaggctacctgac 48110646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50859410 - 50859345
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||||||| |||| ||||||| ||| |||||||||||||  ||||||||||| ||||    
T  50859410 gttcaaaccccggacaccccacatattcaccttaaaaggtgaattctagccactaggctacttgac 50859345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4354148 - 4354084
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||  ||||||| |||||||||||| |||||| ||||||||||  ||| |||||||||||    
T  4354148 gttcgaacttcggacaccccacttattcaccttataaagtgaattctagccaccaggctacctga 4354084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4616925 - 4616989
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||| | ||||| |||||||||||| |||||| ||||||||||  |||||| ||||||||    
T  4616925 gttcgaaccacagacaccccacttattcaccttataaagtgaattctagccactagactacctga 4616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6014561 - 6014513
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    |||||||  |||||||| |||||||||||| ||||||||||||||||||    
T  6014561 gttcgaattccggacaccccacttattcaccttataaggtgaattctaa 6014513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9768852 - 9768785
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||  | |||||||||||||   |||||||||||||||    
T  9768852 gttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagctactaggctacctgac 9768785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22346471 - 22346535
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||| | |||| ||| |||||||| |||||||||||| ||||  |||||||||||||||    
T  22346471 gttcgaaccctgaacaccccatttattcaccttataaggtgaactctagccactaggctacctga 22346535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50199519 - 50199452
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||  | ||||| |||||||  ||||||||||||||||    
T  50199519 gttcgaaccccggacaccccacttattcaccttgaaaaaggtcaattctagccactaggctacctgac 50199452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18923928 - 18923881
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||| ||||||| |||| ||||||| |||||||||||||||||    
T  18923928 gttcgaacctcggacaccccacgtattcaccttataaggtgaattcta 18923881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41677112 - 41677178
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctga 65  Q
    |||||||| |||||||| |||||||||||| ||  | |||||||||||||  |||||||||||||||    
T  41677112 gttcgaactccggacaccccacttattcaccttgaaaaaggtgaattctagccactaggctacctga 41677178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 3341777 - 3341712
Alignment:
Q  3 tcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||| |||||||||||| ||  | |||||||||||||  ||||||||| ||||||    
T  3341777 tcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagccactaggctgcctgac 3341712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 23345087 - 23345053
Alignment:
Q  14 acactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||||||||||||||    
T  23345087 acactccacttattcaccttataaggtgaattcta 23345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32635192 - 32635258
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||  ||||||| |||||  ||||||||||| ||||    
T  32635192 gttcgaaccccggacaccccacttattcaccttaagaggtgaatttctagccactaggctacttgac 32635258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40678875 - 40678940
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    |||||| |||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  40678875 gttcgatccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 40678940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 749629 - 749565
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| ||||||| |||||||||  |  |||||||||||||    
T  749629 gttcgaaccccg-acaccccacttattcaccttataagatgaattctagccgttaggctacctgac 749565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 3276477 - 3276432
Alignment:
Q  21 acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||||    
T  3276477 acttattcaccttacaaggtgaattctagccactaggctacctgac 3276432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 4069649 - 4069588
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||  |||||||||||||| |||  ||||||||||||  ||||||||||| ||||    
T  4069649 gaaccccggattctccacttattcaccttaagaggtgaattctacccactaggctacttgac 4069588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4429525 - 4429460
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| | ||| ||||||||||||  |||||||||||||||||  |||||| ||| |||||    
T  4429525 gttcgaaccctgaacattccacttattcatcttataaggtgaattctagccactagactatctgac 4429460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16110063 - 16109998
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||  | |||||||||||||| | ||||| |||||||||||  ||||| |||||||||    
T  16110063 gttcgaaccccaaagactccacttattcattctataaagtgaattctaacaactagactacctgac 16109998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17056923 - 17056858
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||| | |||||||||||| |||  || ||||||||||  |||||||||||||||    
T  17056923 gttcgaaccccagacgccccacttattcaccttactagatgaattctaacaactaggctacctgac 17056858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17350113 - 17350146
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  17350113 gttcgaaccccggacaccccacttattcacttta 17350146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 20357531 - 20357576
Alignment:
Q  21 acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| |||||||||||||||||| ||||||| || |||||    
T  20357531 acttattcaccttataaggtgaattctaaccactaggttatctgac 20357576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 20562424 - 20562379
Alignment:
Q  21 acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| |||||||||||||||||| ||||||| || |||||    
T  20562424 acttattcaccttataaggtgaattctaaccactaggttatctgac 20562379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23930587 - 23930522
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| |||||| ||| ||||| || |||||| ||||| ||||  ||||||||||||||||    
T  23930587 gttcgaaccctggacaccccatttatttaccttataaagtgaactctagccactaggctacctgac 23930522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29491522 - 29491555
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  29491522 gttcgaaccccggacaccccacttattcacttta 29491555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 38021304 - 38021337
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  38021304 gttcgaaccccggacaccccacttattcacttta 38021337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39238768 - 39238801
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  39238768 gttcgaaccccggacaccccacttattcacttta 39238801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50755397 - 50755461
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| ||||| |||||| |||||||||||| |||||| ||||||||||  ||||||||||| ||||    
T  50755397 gttcaaaccctggacac-ccacttattcaccttataaagtgaattctagccactaggctacttgac 50755461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19424098 - 19424141
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  19424098 gttcgaaccccggacaccccacttattcacctt-taaggtgaatt 19424141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23368775 - 23368732
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||    
T  23368775 gttcgaaccccggacaccccacttattcacatta-aaggtgaatt 23368732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25421906 - 25421950
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||| |||||| |||||||||||||||||| ||| ||||||||||    
T  25421906 gttcaaaccccagacactccacttattcaccttaaaaggtgaatt 25421950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27745209 - 27745273
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||| ||| |||||||| |||||| |||| |||||  |||||  ||||||||    
T  27745209 gttcgaaccccggacaccccatttattcaccttataaagtgagttctagccactaaactacctga 27745273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33844669 - 33844701
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  33844669 gttcgaaccccggacaccccacttattcacttt 33844701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33949309 - 33949277
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  33949309 gttcgaaccccggacaccccacttattcacttt 33949277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 41182830 - 41182874
Alignment:
Q  5 gaaccccggacactccacttattcacttt-ataaggtgaattcta 48  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||    
T  41182830 gaaccccggacaccccacttattcactttgaaaaggtgaattcta 41182874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50177222 - 50177289
Alignment:
Q  1 gttcgaaccccggacactccacttattcact--ttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| ||| |||| ||||||||||||   |||||| ||||||||||| ||||| ||||||||||    
T  50177222 gttcgaactccgaacaccccacttattcacaccttataaagtgaattctaaccactaagctacctgac 50177289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4375 - 4437
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  4375 gttcgaaccccggacactccacttattcactttataaggtgaattctagacactagactacct 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42455437 - 42455375
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  42455437 gttcgaaccccggacactccacttattcaccttataaggtgaattctagccactaggctacct 42455375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29096351 - 29096286
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  29096351 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 29096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 6806682 - 6806618
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  || |||||||||||||    
T  6806682 ttcgaaccccggacactccacttattcacattataaggtgaattctagccattaggctacctgac 6806618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29331295 - 29331360
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||  ||||||||||||||||    
T  29331295 gttcgaaccccgaacactccacttattcatcttataaggtgaattctagccactaggctacctgac 29331360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 30403806 - 30403867
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  30403806 gaaccccggacaccccacttattcaccttataaggtgaattctaaccactaagctacctgac 30403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32158457 - 32158392
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  32158457 gttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 32158392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10943768 - 10943832
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||  |||||||||||||||    
T  10943768 gttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactaggctacctga 10943832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38618724 - 38618660
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||   ||||||||||||||    
T  38618724 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagcaactaggctacctga 38618660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20762333 - 20762395
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  20762333 gttcgaaccctggacaccccacttattcaccttataaggtgaattctagtcactagactacct 20762395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 843411 - 843346
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||||||  |||||||||  ||||||||||||||||    
T  843411 gttcgaaccccggacaccccacttattcaccttataaattgaattctagccactaggctacctgac 843346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1244770 - 1244705
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  1244770 gttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactaggttacctgac 1244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18478055 - 18478120
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||  || |||||||||||||    
T  18478055 gttcgaaccctggacaccccacttattcaccttataaggtgaattctagccattaggctacctgac 18478120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19059047 - 19058982
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||  |||||| |||||||||    
T  19059047 gttcgaaccctggacaccccacttattcaccttataaggtgaattctagccactagcctacctgac 19058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36226178 - 36226113
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||||||| |||||||  |||||||||||||| ||  ||||||||||||||||    
T  36226178 gttcgaaccccggacactccatttattcatcttataaggtgaattatagccactaggctacctgac 36226113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 2029170 - 2029106
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||  |||||||||| |||||    
T  2029170 ttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaggctatctgac 2029106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8015887 - 8015934
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  8015887 gttcgaaccccggacaccccacttattcaccttataaggtgaattcta 8015934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6561950 - 6562011
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacc 62  Q
    |||||||| ||| |||| |||| ||||||| |||||||||||||||||| ||||||||||||    
T  6561950 gttcgaactccgaacaccccacatattcaccttataaggtgaattctaaccactaggctacc 6562011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3535979 - 3535912
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||  | || ||||||||||| ||||||||||||||||    
T  3535979 gttcgaaccccggacaccccacttattcaccttaaaaaaagtgaattctaaccactaggctacctgac 3535912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 29841401 - 29841465
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| |||||||||| | ||||||||| |||||||  || |||||||||||||    
T  29841401 ttcgaaccccggacaccccacttattccccttataaggtaaattctagccattaggctacctgac 29841465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 33729842 - 33729890
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  33729842 gacaccccacttattcaccttataaggtgaattctaaccactaggctac 33729890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 9577363 - 9577410
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  9577363 ccacttattcaccttataaggtgaattctagccactaggctacctgac 9577410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33800945 - 33801008
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctg 64  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| |||||   |||||||||||||    
T  33800945 gttcgaaccccagacaccccacttattcaccttataaggtgagttctagctactaggctacctg 33801008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18872573 - 18872636
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| |||  ||||||||||||  ||||||||||||||||    
T  18872573 gttcgaaccccgaacaccccacttattcacctta--aggtgaattctagccactaggctacctgac 18872636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5156949 - 5157014
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||  ||||| | |||||||||| |||||||||||||||||  |||||| |||||||||    
T  5156949 gttcgaaccctagacaccctacttattcaccttataaggtgaattctagccactagactacctgac 5157014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9963468 - 9963529
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacc 62  Q
    ||||||||  ||||| | |||||||||||| |||||| ||||||||||| ||||||||||||    
T  9963468 gttcgaacttcggaccccccacttattcaccttataaagtgaattctaaccactaggctacc 9963529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 15978716 - 15978655
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||  |||| |||||||||||| |||||||||||||| ||| ||||||||||| ||||    
T  15978716 gaaccccaaacaccccacttattcaccttataaggtgaattttaaccactaggctacttgac 15978655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17137910 - 17137846
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacct 63  Q
    ||||||||||| |||||||||||||||||| ||  | || ||||||||||| |||||||||||||    
T  17137910 gttcgaacccccgacactccacttattcaccttgaaaaacgtgaattctaaccactaggctacct 17137846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18202136 - 18202071
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| || |||||| | |||||||||| |||||||||||||| ||  ||||||||||||||||    
T  18202136 gttcgaatcctggacacccaacttattcaccttataaggtgaattatagccactaggctacctgac 18202071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20945934 - 20945869
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||  |||||||| |||||||||||| |||||||||||||||||  ||||||  ||||||||    
T  20945934 gttcgaaatccggacaccccacttattcaccttataaggtgaattctagccactagattacctgac 20945869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43166721 - 43166786
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||  |||| |||||||||||| |||||||||||||||||  |||||||||| |||||    
T  43166721 gttcgaatcccaaacaccccacttattcaccttataaggtgaattctagccactaggctatctgac 43166786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 6014835 - 6014895
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||| ||||||||  ||||||||||  |||||||||||||||||  |||||||||||||||    
T  6014835 gaactccggacacctcacttattcatcttataaggtgaattctagccactaggctacctga 6014895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27219606 - 27219546
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    |||| ||||||| |||| |||||||||||| | |||||||||||||||  |||||||||||    
T  27219606 gttcaaaccccgtacaccccacttattcacctaataaggtgaattctagccactaggctac 27219546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28537187 - 28537254
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||  | | |||||||||||  ||||||||||| ||||    
T  28537187 gttcgaaccccggacaccccacttattcactttgaaaatggtgaattctagccactaggctacttgac 28537254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 38307724 - 38307767
Alignment:
Q  23 ttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||  ||||||||||||||||| |||||||||||||||||    
T  38307724 ttattcagcttataaggtgaattctagtcactaggctacctgac 38307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1463923 - 1463988
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||| ||||||||||||    
T  1463923 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccaccaggctacctgac 1463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4674858 - 4674793
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||| |||||  |||||||||    
T  4674858 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctaaccactaaactacctgac 4674793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20735218 - 20735153
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  20735218 gttcgaatcccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 20735153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36045177 - 36045112
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||| || ||||| |||||||    
T  36045177 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctaaccaataggccacctgac 36045112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 41843728 - 41843774
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||| ||||||||||||||||||  | ||||||||||||    
T  41843728 ccacttattcaccttataaggtgaattctaacaagtaggctacctga 41843774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7234915 - 7234850
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| || || ||| |||||||| |||||||||||||||||  |||||| |||| ||||    
T  7234915 gttcgaaccccagataccccatttattcaccttataaggtgaattctagccactagtctacttgac 7234850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10508632 - 10508697
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| || |||||| |||||||||||| |||||||||||||| ||  || ||||||| |||||    
T  10508632 gttcgaaacctggacaccccacttattcaccttataaggtgaattttagccaataggctatctgac 10508697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13754058 - 13754123
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||  ||||||| ||| |||||||  ||||||||||||||||||   ||||||||||||||    
T  13754058 gttcgaacgtcggacaccccatttattcatcttataaggtgaattctaactgctaggctacctgac 13754123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 20191493 - 20191522
Alignment:
Q  1 gttcgaaccccggacactccacttattcac 30  Q
    ||||||||||||||||||||||||||||||    
T  20191493 gttcgaaccccggacactccacttattcac 20191522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23925595 - 23925660
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||||| || |||||||||||  |||||||||||||||||  |||||| |||| ||||    
T  23925595 gttcgaatcccggataccccacttattcatcttataaggtgaattctagccactagactacttgac 23925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29106081 - 29106016
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||  ||||| |||||||||||| ||||||||| |||||||  ||| || |||||||||    
T  29106081 gttcgaaccctagacaccccacttattcaccttataaggttaattctagccaccagactacctgac 29106016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 29144206 - 29144259
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||| ||| |||||||| |||||||||||||||||| ||||||  ||||||||    
T  29144206 gacaccccatttattcacgttataaggtgaattctaaccactagattacctgac 29144259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42618456 - 42618411
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattc 46  Q
    ||||||| |||||| || |||||||||||||||||||| |||||||    
T  42618456 gttcgaatcccggataccccacttattcactttataagatgaattc 42618411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3102170 - 3102106
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||| |||| ||| ||||| ||||||||| ||||||||||  ||||||  |||||||    
T  3102170 gttcgaaccccgaacaccccatttatttactttataaagtgaattctagccactagattacctga 3102106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 4216846 - 4216810
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaa 49  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  4216846 gacaccccacttattcaccttataaggtgaattctaa 4216810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7988900 - 7988944
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||| ||||||  ||||||||||||||||||| |||||||    
T  7988900 gttcgaacctcggacatcccacttattcactttataaagtgaatt 7988944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9408993 - 9408929
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||||||||  || |||||||  ||||||| |||||||||| |||||  ||||||||    
T  9408993 gttcgaaccccggacacctcatttattcaacttataagatgaattctaaccactaaactacctga 9408929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12262990 - 12263022
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12262990 gttcgaaccccgaacactccacttattcacttt 12263022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 19453988 - 19453931
Alignment:
Q  6 aaccccggacactccacttattcactttata----aggtgaattctaatcactaggct 59  Q
    ||||| |||||| |||||||||||| |||||    |||||||||||||||||||||||    
T  19453988 aaccctggacaccccacttattcaccttatatacaaggtgaattctaatcactaggct 19453931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26302537 - 26302493
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||| ||||||| |||||||||||  ||||||||||||||    
T  26302537 gttcgaacctcggacaccccacttattcatcttataaggtgaatt 26302493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34010587 - 34010654
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttata--aggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||   || |||||||| |||||  |||||||||||| ||||||| |||||||||    
T  34010587 gttcgaaccccggacatctcatttattcaccttatataaggtgaattctagtcactagactacctgac 34010654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35168675 - 35168632
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  35168675 gttcgaaccccggacaccccacttattcacctt-taaggtgaatt 35168632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34948158 - 34948223
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  34948158 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 34948223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21285396 - 21285334
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||    
T  21285396 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 21285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 14102517 - 14102578
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||    
T  14102517 gaaccccggacaccccacttattcaccttataaggtgaattctaactactaggctacctgac 14102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 14412534 - 14412595
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||    
T  14412534 gaaccccggacaccccacttattcaccttataaggtgaattctaactactaggctacctgac 14412595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29658315 - 29658250
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||| ||||    
T  29658315 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacttgac 29658250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33202597 - 33202532
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||  ||||||||||||||||    
T  33202597 gttcgaaccccggacaccccacttattcatcttataaggtgaattctagccactaggctacctgac 33202532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22966001 - 22965936
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||| |||||| |||| ||||    
T  22966001 gttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccactagactacatgac 22965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38451915 - 38451980
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||  |||||| |||||||||    
T  38451915 gttcgaatcccggacaccccacttattcacattataaggtgaattctagccactagactacctgac 38451980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47552265 - 47552330
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||  ||| ||||||||||||    
T  47552265 gttcgaaccccggacaccctacttattcaccttataaggtgaattctagccaccaggctacctgac 47552330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 8724434 - 8724486
Alignment:
Q  3 tcgaaccccggacactccacttattcactttataaggtgaattctaatcacta 55  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  8724434 tcgaacctcggacaccccacttattcaccttataaggtgaattctaatcacta 8724486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 8214171 - 8214226
Alignment:
Q  10 ccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||| ||||||||    
T  8214171 ccggacaccccacttattcaccttataaggtgaattctaaccactagactacctga 8214226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 47403620 - 47403566
Alignment:
Q  12 ggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  47403620 ggacactccacttattcaccttataaggtgaattctagccactaagctacctgac 47403566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2261527 - 2261462
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| | |||||||||| |||||||||||||||||  ||||| ||||||||||    
T  2261527 gttcgaatcccggacacccaacttattcaccttataaggtgaattctagacactatgctacctgac 2261462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 4169132 - 4169193
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||  ||||||| ||||||||    
T  4169132 gaaccccggacaccccacttattcaccttataaagtgaattctagccactaggttacctgac 4169193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 5787517 - 5787578
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||  |||| |||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  5787517 gaaccccaaacaccccacttattcaccttataaggtgaattctagtcactaggctacttgac 5787578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30644221 - 30644282
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacc 62  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||  |||||| |||||    
T  30644221 gttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactagtctacc 30644282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38025393 - 38025458
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| |||||| ||||||||||||  ||||||||||||| |||  ||||||||||||||||    
T  38025393 gttcgaacctcggacattccacttattcatcttataaggtgaatcctagccactaggctacctgac 38025458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42887206 - 42887267
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacc 62  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||||  |||||| |||||    
T  42887206 gttcgaaccccggacaccccacttatttaccttataaggtgaattctagccactagactacc 42887267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 3595340 - 3595404
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| |||| ||| |||||||| |||||||||||||||||  | ||||||||||||||    
T  3595340 ttcgaaccccgaacaccccaattattcaccttataaggtgaattctaggctctaggctacctgac 3595404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 17900920 - 17900857
Alignment:
Q  3 tcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| | |||||||||| | |||||||||||||||||  ||||||||||| ||||    
T  17900920 tcgaaccccggactccccacttattctccttataaggtgaattctagccactaggctacttgac 17900857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33555121 - 33555168
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||    
T  33555121 gttcgaaccccggacactccacttattcatcttataagctgaattcta 33555168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 45198140 - 45198077
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||  || ||| ||||||||    
T  45198140 ttcgaaccccggacaccccatttattcaccttataaggtgaattctagccattagactacctga 45198077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 38792268 - 38792322
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggct 59  Q
    ||||||||||||| | |||||||||| |||||||||||||||||  |||||||||    
T  38792268 gaaccccggacaccctacttattcaccttataaggtgaattctagccactaggct 38792322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43902579 - 43902517
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||||| || |||| |||||||||||| |||||||||||||||||  ||||| |||||||    
T  43902579 gttcgaaccacgaacaccccacttattcaccttataaggtgaattctagccactatgctacct 43902517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 2366421 - 2366474
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||| |||||||||||| |||||||||||||||||  || |||||||||||||    
T  2366421 gacaccccacttattcaccttataaggtgaattctagccattaggctacctgac 2366474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4042311 - 4042246
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||  ||||||| | ||||||||| |||||||||||||||||| || |||| |||||||||    
T  4042311 gttcgaacttcggacacccaacttattcattttataaggtgaattctagtcgctagactacctgac 4042246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22706071 - 22706006
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| ||| |||||||| |||||||||||| ||||||| |||||||||   |||||||||||||||    
T  22706071 gttcaaactccggacaccccacttattcaccttataagatgaattctagctactaggctacctgac 22706006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 31694123 - 31694168
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattct 47  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  31694123 ttcgaactccggacaccccacttatttactttataaggtgaattct 31694168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35368448 - 35368513
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| ||| |||||||| |||||||||||||||||  |||| ||||| |||||    
T  35368448 gttcgaactccggacaccccatttattcaccttataaggtgaattctagccactgggctatctgac 35368513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25711174 - 25711114
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttat-aaggtgaattctaatcactaggcta 60  Q
    ||||||||| ||||||| ||||||||||||||||| || ||||||||||  ||||||||||    
T  25711174 gttcgaacctcggacaccccacttattcactttataaatgtgaattctatccactaggcta 25711114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25818338 - 25818382
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||||||||||| |||||||||||||||||  |||||||||||||    
T  25818338 gttcgaaccccgaacactccacttattcaccatataaggtgaatt 25818382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28914920 - 28914877
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  28914920 gttcgaaccccggacaccccacttattcacttta-aaggtgaatt 28914877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 29710132 - 29710080
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||||||||  |||||||||||||||||  ||||| |||||||||    
T  29710132 gacactccacttattcatcttataaggtgaattctagccactaagctacctga 29710080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45011701 - 45011637
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||| |||| || |||||||||||| |||||||||||||||||  || |||| |||||||    
T  45011701 gttcgaacctcggagaccccacttattcaccttataaggtgaattctagccattagggtacctga 45011637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 27907929 - 27907874
Alignment:
Q  11 cggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||||||||||  |||||||||||||| ||  ||||||||||||||||    
T  27907929 cggacaccccacttattcatcttataaggtgaattttagccactaggctacctgac 27907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30152793 - 30152840
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||| |||| |||||||||||| ||||||| |||||||||    
T  30152793 gttcgaaccccgaacaccccacttattcaccttataagatgaattcta 30152840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 22047583 - 22047637
Alignment:
Q  12 ggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||| |||||||||||| ||||||| |||||||||  ||||| ||||||||||    
T  22047583 ggacaccccacttattcaccttataagatgaattctagccactaagctacctgac 22047637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 25086974 - 25086928
Alignment:
Q  20 cacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| |||||||||||||||||| | ||| ||||||||||    
T  25086974 cacttattcaccttataaggtgaattctaaccgctatgctacctgac 25086928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37129402 - 37129340
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||| |||| ||||||| |||||||||||| ||||||||| |||||||  || ||||||||||    
T  37129402 gttcaaacctcggacaccccacttattcaccttataaggtaaattctagccagtaggctacct 37129340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46337911 - 46337845
Alignment:
Q  1 gttcgaaccccggacactcc-acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| |||||| || |||||||||| ||||||  |||||||||  ||||||||||||||||    
T  46337911 gttcgaaccctggacacccccacttattcaccttataaattgaattctagccactaggctacctgac 46337845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17997781 - 17997716
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||| |||||| ||| |||||||| ||| |||||||||||||  |||||| |||| ||||    
T  17997781 gttcgaaccctggacaccccatttattcaccttaaaaggtgaattctagccactagactacttgac 17997716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19126789 - 19126822
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  19126789 gttcgaaccccggacaccccacttattcacttta 19126822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 42286380 - 42286441
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||| ||||||||| || |||||||||||||||||| || ||  |||||||||    
T  42286380 gaacaccggacaccccacttatttaccttataaggtgaattctaaccaataaactacctgac 42286441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 44843751 - 44843808
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||| |||||||  |||||||||||||||||| |||||| ||| |||||    
T  44843751 cccggacaccccatttattcatcttataaggtgaattctaaccactagactatctgac 44843808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4590656 - 4590589
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa--ttctaatcactaggctacctgac 66  Q
    ||||||| |||||||||  ||||||||||  ||||||||||||  |||||  ||||||||||||||||    
T  4590656 gttcgaatcccggacaccacacttattcatcttataaggtgaattttctagccactaggctacctgac 4590589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8725181 - 8725133
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttat-aaggtgaattcta 48  Q
    |||||||||||| |||| |||||||||||| |||| |||||||||||||    
T  8725181 gttcgaaccccgaacaccccacttattcaccttataaaggtgaattcta 8725133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16814749 - 16814781
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    ||||||||||| |||||||||||||||||||||    
T  16814749 gttcgaaccccagacactccacttattcacttt 16814781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22741257 - 22741317
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    ||||||| | ||||||| |||||||||||  |||||||||||||||||  |||||| ||||    
T  22741257 gttcgaatctcggacaccccacttattcatcttataaggtgaattctagccactagactac 22741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29779033 - 29779097
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||| ||| | ||| ||||||||||| |||||||||||| ||||  | |||||||||||||    
T  29779033 gttcgaactccgaatacttcacttattcaccttataaggtgaactctagccgctaggctacctga 29779097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 46915017 - 46915080
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| |||| ||||||||||  |||| || ||||||||||| || |||||||||||||    
T  46915017 ttcgaaccccgaacac-ccacttattcggtttagaaagtgaattctaaccagtaggctacctgac 46915080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25020571 - 25020506
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  25020571 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 25020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16251566 - 16251504
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  16251566 gttcgaactccggacaccccacttattcaccttataaggtgaattctagtcactaggctacct 16251504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9438354 - 9438419
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||| ||||    
T  9438354 gttcgaaccccggacaccccactcattcaccttataaggtgaattctaaccactaggctacttgac 9438419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9491778 - 9491713
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||| |||||    
T  9491778 gttcgaaccccggacaccccacttattcaccttataagatgaattctaaccactaggctaactgac 9491713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12089149 - 12089214
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  12089149 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggatacctgac 12089214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 12127951 - 12127887
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||  |||||| |||||||||    
T  12127951 ttcgaaccccggacacgccacttattcaccttataaggtgaattctagccactagactacctgac 12127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3448404 - 3448469
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||  || |||||||||||||    
T  3448404 gttcgaaccccggacaccccacttattcatcttataaggtgaattctagccaataggctacctgac 3448469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5134477 - 5134412
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  5134477 gttcgaacctcagacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 5134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18904726 - 18904661
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| | |||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  18904726 gttcgaactctggacaccccacttattcaccttataaggtgaattctagccactaggctacctgac 18904661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22983632 - 22983697
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||| ||||| ||||| ||||    
T  22983632 gttcgaaccccggacaccccacttattcatcttataaggtgaattctaaccactatgctacgtgac 22983697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23804776 - 23804711
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||| ||||| ||||| ||||    
T  23804776 gttcgaaccccggacaccccacttattcatcttataaggtgaattctaaccactatgctacgtgac 23804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 3591371 - 3591307
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||| || ||||| ||||||||    
T  3591371 ttcgaaccccggacaccctacttattcaccttataaggtgaattctagtcgctaggttacctgac 3591307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7720546 - 7720482
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||||||  | |||||||||||||    
T  7720546 gttcgaaccccggacaccccacttattcaccttataaggtggattctagccgctaggctacctga 7720482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31761206 - 31761270
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||| ||| ||||| | |||||||||| |||||||||||||||||||||||| |||||||||    
T  31761206 gttcgaatcccagacaccctacttattcaccttataaggtgaattctaatcactaagctacctga 31761270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35190815 - 35190877
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||  |||||| ||||||    
T  35190815 gttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactagactacct 35190877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2945648 - 2945713
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||| ||||||| ||||||||| ||| ||||||||||||| || |||||||||||||||||    
T  2945648 gttcaaacctcggacaccccacttattaactgtataaggtgaattttagtcactaggctacctgac 2945713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10377167 - 10377102
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| ||||||| |||||||||  |||||| |||||||||    
T  10377167 gttcgaaccccgaacaccccacttattcacgttataagatgaattctagccactagactacctgac 10377102  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19165403 - 19165467
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||  |||||| |||||||||    
T  19165403 gttcgaaccccg-acaccccacttattcaccttataaggtgaattctagccactagtctacctgac 19165467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22389793 - 22389728
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||  | |||| |||||||||    
T  22389793 gttcgaatcccggacaccccacttattcaccttataaggtgaattctagccgctagactacctgac 22389728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 30566114 - 30566175
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |  |||||| |||||||||    
T  30566114 gaaccccggacaccccacttattcaccttataaggtgaattccagccactagactacctgac 30566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12101938 - 12101985
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||    
T  12101938 gttcgaaccccggacaccctacttattcaccttataaggtgaattcta 12101985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2970241 - 2970306
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||||||| |||||||||||| ||||||| |||||||||  || | |||||||||||    
T  2970241 gttcaaaccccggacaccccacttattcaccttataagatgaattctagccatttggctacctgac 2970306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6530247 - 6530182
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||| ||||||| |||||||||||| |||||||||||||||||  |||||| |||| ||||    
T  6530247 gttcaaacctcggacaccccacttattcaccttataaggtgaattctagccactagactacttgac 6530182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 19417875 - 19417932
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggct 59  Q
    |||||| ||| ||||| |||||||||||  ||||||||||||||||| ||||||||||    
T  19417875 ttcgaatcccagacaccccacttattcatcttataaggtgaattctagtcactaggct 19417932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29284170 - 29284234
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctga 65  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  |||||||||||||||    
T  29284170 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctga 29284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34396135 - 34396200
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| | | |||||||| |||||||||||||||||| || ||| |||||||||    
T  34396135 gttcgaactccggacaccctatttattcaccttataaggtgaattctaaccaatagactacctgac 34396200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7563619 - 7563575
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||    
T  7563619 gttcaaaccccggacaccccacttattcaccttataaggtgaatt 7563575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15126294 - 15126342
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    |||||||| |||||||| ||| |||||||| ||||||||||||||||||    
T  15126294 gttcgaactccggacaccccatttattcaccttataaggtgaattctaa 15126342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 5678242 - 5678195
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||||||||||||||||  |||||| |||||||||    
T  5678242 ccacttattcaccttataaggtgaattctatccactagactacctgac 5678195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 6025428 - 6025383
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  6025428 ttcgaaccccggaca-tccacttattcatcttataaggtgaattcta 6025383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6270652 - 6270590
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||| | |||| ||| |||||||| |||||||||||||||||  ||||||| |||||    
T  6270652 gttcgaaccctgaacaccccaattattcaccttataaggtgaattctagccactaggttacct 6270590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14981745 - 14981680
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    |||||||||| |||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  14981745 gttcgaaccctggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 14981680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 18631525 - 18631571
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||  | || ||||||||||||||||||||||||||||||    
T  18631525 ttcgaaccccaaataccccacttattcactttataaggtgaattcta 18631571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23771085 - 23771131
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattct 47  Q
    |||||||| |||||||| ||| ||||||||| |||||||||||||||    
T  23771085 gttcgaactccggacaccccatttattcactctataaggtgaattct 23771131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6144016 - 6144049
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  6144016 gttcgaaccccggacaccccacttattcacttta 6144049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6652261 - 6652326
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| || ||||| ||| |||||||| |||||| ||||||| ||  ||||||||||||||||    
T  6652261 gttcgaactccagacaccccatttattcaccttataaagtgaattatagccactaggctacctgac 6652326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9424496 - 9424560
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| ||||  ||||||||||| ||||||||||||||||| || |||| ||| |||||    
T  9424496 gttcgaaccccg-acacctcacttattcaccttataaggtgaattctagtcgctagactatctgac 9424560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 10424570 - 10424513
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| |||||||||||| |||||| || |||||||  |||| |||||||||||    
T  10424570 cccggacaccccacttattcaccttataaagtaaattctagccacttggctacctgac 10424513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19279501 - 19279566
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||| ||||||| | |||||||    ||||||||||||||    
T  19279501 gttcgaacctcggacaccccacttattcaccttataagataaattctagaagctaggctacctgac 19279566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19642590 - 19642527
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| | |||| ||||||||| | ||||||||||||||||    
T  19642590 gttcgaaccccagacaccccacttattcac-taataacgtgaattct-agcactaggctacctgac 19642527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26528619 - 26528680
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacc 62  Q
    |||| |||| ||||||| |||||||||||| ||||||||| |||| ||| |||||| |||||    
T  26528619 gttcaaacctcggacaccccacttattcaccttataaggtaaattttaaacactagactacc 26528680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33628984 - 33628951
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  33628984 gttcgaaccccggacaccccacttattcacttta 33628951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17751380 - 17751348
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  17751380 gttcgaaccccggacaccccacttattcacttt 17751348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 18991471 - 18991420
Alignment:
Q  14 acactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||||||||| |||||||||||||||  ||||||||||| ||||    
T  18991471 acaccccacttattcactt-ataaggtgaattctagccactaggctacttgac 18991420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 22501084 - 22501136
Alignment:
Q  14 acactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| |||||||||||| || ||||||||||||||  |||||| |||||||||    
T  22501084 acaccccacttattcaccttgtaaggtgaattctagccactagactacctgac 22501136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34365787 - 34365851
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||| || ||||||||||||||||  |||||| ||||||||||  ||||| | |||||||    
T  34365787 gttcgaacctcgaacactccacttattcatcttataaagtgaattctagccactaagttacctga 34365851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28221350 - 28221289
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacc 62  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  28221350 gttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggctacc 28221289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12856236 - 12856301
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| |||| |||||    
T  12856236 gttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactatgctatctgac 12856301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20753168 - 20753103
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||  ||||||||||||||||    
T  20753168 gttcgaaccccggacaccacacttattcaccttataaggtgaattctagccactaggctacctgac 20753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 31578070 - 31578134
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  31578070 ttcgaaacccggacaccccacttattcacattataaggtgaattctagccactaggctacctgac 31578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34773726 - 34773679
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34773726 gttcgaaccccggacaccccacttattcactttataaggtgaattcta 34773679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3465635 - 3465697
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| ||||||    
T  3465635 gttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactagactacct 3465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3442895 - 3442960
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||| || ||| |||||||||    
T  3442895 gttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccagtagactacctgac 3442960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17859830 - 17859895
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| ||||  ||||||||||| |||||||||||||||||  ||||||||||||||||    
T  17859830 gttcgaaccccgaacacctcacttattcaccttataaggtgaattctagccactaggctacctgac 17859895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30295565 - 30295630
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| ||| |||||||||||||  ||||||||||||||||    
T  30295565 gttcgaaccccagacaccccacttattcaccttagaaggtgaattctagccactaggctacctgac 30295630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30324467 - 30324532
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| ||| |||||||||||||  ||||||||||||||||    
T  30324467 gttcgaaccccagacaccccacttattcaccttagaaggtgaattctagccactaggctacctgac 30324532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33944406 - 33944341
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| || | |||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  33944406 gttcgaacctcgaatactccacttattcattttataaggtgaattctagccactaggctacctgac 33944341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38433363 - 38433428
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||  |||| ||||||||||    
T  38433363 gttcgaaccccagacaccccacttattcaccttataaggtgaattctaacaactaagctacctgac 38433428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41003215 - 41003150
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| |||||||||||| ||| ||| |||||||||| ||||||||||||||||    
T  41003215 gttcgaactccggacaccccacttattcaccttacaagatgaattctaaccactaggctacctgac 41003150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 22478782 - 22478718
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||||  |||||| ||||||||    
T  22478782 ttcgaaccccggacaccccatttattcaccttataaggtgaattctaactactaggttacctgac 22478718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36257746 - 36257806
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||  |||||||||||    
T  36257746 gttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactaggctac 36257806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 41943960 - 41944024
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| | |||||||||| |||||||||||||||||  | ||||||||||||||    
T  41943960 ttcgaaccccggacaccctacttattcaccttataaggtgaattctagccgctaggctacctgac 41944024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53698023 - 53697959
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||||   ||||||||||||||    
T  53698023 gttcgaaccccggacaccccacttatttaccttataaggtgaattctagcaactaggctacctga 53697959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 30152172 - 30152231
Alignment:
Q  7 accccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| |||||||||||| |||||||||||||||||  || |||||||||||||    
T  30152172 accccggacaccccacttattcaccttataaggtgaattctagccaataggctacctgac 30152231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30616052 - 30616111
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggcta 60  Q
    |||||| |||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  30616052 gttcgagccccggacaccccacttattcactttaaaaagtgaattctagtcactaggcta 30616111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47017989 - 47017942
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  47017989 gttcgaaccccggacaccccacttattcaccttataaggtgaattcta 47017942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36008327 - 36008389
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||  ||||| |||||||    
T  36008327 gttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaagctacct 36008389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 37032221 - 37032175
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||    
T  37032221 ttcgaaccccggacaccccacttattcaccttataaggtgaattcta 37032175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9924908 - 9924973
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||||||||||||||||| || || |||||||| ||  |||||| |||||||||    
T  9924908 gttcgaaccccggacactccacttattcaccttgtatggtgaattttatccactagactacctgac 9924973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36576316 - 36576381
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||| || ||||  ||||||||    
T  36576316 gttcgaaccccggacaccccacttattcaccttataagatgaattctagtcgctagattacctgac 36576381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 49280708 - 49280647
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||| ||||||  ||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  49280708 gaaccctggacacctcacttattcaccttataaggtgaattctaaccactaggctacttgac 49280647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 56546492 - 56546427
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | ||||| |||||||||||||||| || ||||||||||  ||||||||||||||||    
T  56546492 gttcgaaccacagacaccccacttattcactttaaaaagtgaattctagccactaggctacctgac 56546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1297906 - 1297970
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||| ||| || | ||||||||    
T  1297906 ttcgaaccctgaacactccacttattcaccttataaggtgaattctagtcattaagttacctgac 1297970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 10098178 - 10098242
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| |||||||||||  ||||||| |||||||||  |||||| |||||||||    
T  10098178 ttcgaaccccggacaccccacttattcatcttataagatgaattctagccactagactacctgac 10098242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 12820444 - 12820384
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||| |||||| |||||||||||| |||||||||||||||||  |||||||||| ||||    
T  12820444 gaaccctggacaccccacttattcaccttataaggtgaattctagccactaggctatctga 12820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13211395 - 13211347
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  13211395 gttcgaaccccggacactccacttattcatttgataaggtaaattctaa 13211347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15021477 - 15021541
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||||||    
T  15021477 gttcgaaccccgaacagcccacttattcaccttataaggtgaattatagccactaggctacctga 15021541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26254004 - 26254052
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  26254004 gttcgaatcccggacactccacttattcactttataatgtaaattctaa 26254052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 29269357 - 29269293
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| |||||||||||  ||||| |||||||| ||  ||||||||||||||||    
T  29269357 ttcgaaccccggacaccccacttattcatcttatatggtgaattttagccactaggctacctgac 29269293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32885740 - 32885800
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||  ||||| |||||    
T  32885740 gttcgaacctcggacaccccacttattcaccttataaggtgaattctatccactaagctac 32885800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44074905 - 44074969
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||| ||  || ||||||||||||    
T  44074905 gttcgaatcccggacaccccacttattcaccttataaggtgaattttagccattaggctacctga 44074969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10757818 - 10757771
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  10757818 gttcgaaccccggacaccccacttattcaccttataaggtaaattcta 10757771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10970989 - 10970942
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  10970989 gttcgaaccccggacaccccacttattcaccttataaggtaaattcta 10970942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5430408 - 5430342
Alignment:
Q  1 gttcgaaccccggacactccactt-attcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||||||||  ||||||||||| ||||    
T  5430408 gttcgaaccccggacaccccactttattcaccttataagatgaattctagccactaggctacatgac 5430342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8690266 - 8690331
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  8690266 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 8690331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9693014 - 9693079
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  9693014 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 9693079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14149845 - 14149910
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  14149845 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 14149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 20266918 - 20266980
Alignment:
Q  5 gaaccccggacactcc-acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| || |||||||||| |||||||||||||||||  ||| ||||||||||||    
T  20266918 gaaccccggacacccccacttattcaccttataaggtgaattctagccaccaggctacctgac 20266980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28520774 - 28520709
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  28520774 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 28520709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 31601859 - 31601905
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||||||| |||||||||||| ||||||| |||||||||    
T  31601859 ttcgaaccccggacaccccacttattcaccttataagatgaattcta 31601905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 48968253 - 48968188
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  48968253 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 48968188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 56314813 - 56314875
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    ||||||||| |||||||  ||||||||||| ||| |||||||||||||  |||||||||||||    
T  56314813 gttcgaaccacggacaccacacttattcacattaaaaggtgaattctagccactaggctacct 56314875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9285702 - 9285637
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| ||||||||| || |||||||||||||||||  |||||| |||| ||||    
T  9285702 gttcgaaccccagacaccccacttattaaccttataaggtgaattctagccactagactacttgac 9285637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31156263 - 31156198
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| ||||| ||  ||||||||||||||| || ||||||||||  ||||||||||||||||    
T  31156263 gttcgaactccggataccgcacttattcactttaaaaagtgaattctagccactaggctacctgac 31156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 34684621 - 34684674
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcacta 55  Q
    |||||||| | ||||| |||||||||||| |||||||||||||||||| |||||    
T  34684621 ttcgaacctcagacaccccacttattcaccttataaggtgaattctaaccacta 34684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37274632 - 37274697
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||  ||||||||| |||||||  || |||| ||||||||    
T  37274632 gttcgaaccccggacaccccacttattcatcttataaggtaaattctagccattaggttacctgac 37274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 39992898 - 39992947
Alignment:
Q  12 ggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    |||||| |||||||||||| |||||||||||||||||  |||||||||||    
T  39992898 ggacaccccacttattcaccttataaggtgaattctagccactaggctac 39992947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43143772 - 43143837
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| |||||||||||| |||||| ||||||| ||   |||||||||||||||    
T  43143772 gttcgaactccggacaccccacttattcaccttataaagtgaattttagagactaggctacctgac 43143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 52560816 - 52560881
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| |  ||||| ||||||||||| |||||||||||||||||  |||||| |||||||||    
T  52560816 gttcgaaccacatacacttcacttattcaccttataaggtgaattctagccactagactacctgac 52560881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 53291502 - 53291559
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | |||||||||| |||||||||||||||||  ||||| ||||||||||    
T  53291502 cccggacacccaacttattcaccttataaggtgaattctatgcactaagctacctgac 53291559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 54304972 - 54304907
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| |||| |||  |||||||||||  |||||||||||||||||  ||||||||||||||||    
T  54304972 gttcgaatcccgaacatcccacttattcagcttataaggtgaattctagccactaggctacctgac 54304907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 534789 - 534745
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||| |||||||||||||||||| || ||||||||||    
T  534789 ccacttattcaccttataaggtgaattctaaccattaggctacct 534745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11039979 - 11039919
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    ||||||| |||||| ||  ||||||||||| |||||||||||||||||| || ||||||||    
T  11039979 gttcgaatcccggagaccgcacttattcaccttataaggtgaattctaaccattaggctac 11039919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 27584083 - 27584039
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||| |||||||||||||||||  |||||||||||||    
T  27584083 ccacttattcaccttataaggtgaattctagccactaggctacct 27584039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45141276 - 45141220
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactagg 57  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||||| ||| ||||    
T  45141276 gttcgaaccccggacacctcacttattcatgttataaggtgaattctagtcagtagg 45141220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45350328 - 45350376
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||||||    
T  45350328 gttcgaaccccggacaccccacttattcaccttataaaatgaattctaa 45350376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45359807 - 45359855
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||||||    
T  45359807 gttcgaaccccggacaccccacttattcaccttataaaatgaattctaa 45359855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48512251 - 48512295
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||    
T  48512251 gttcgtaccccggacaccccacttattcaccttataaggtgaatt 48512295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49089320 - 49089276
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  49089320 gttcgaacccctgacattccacttattcaccttataaggtgaatt 49089276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 2487357 - 2487404
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||    
T  2487357 ccacttattcatcttataaggtgaattctagccactaggctacctgac 2487404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3544475 - 3544428
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||| | | |||||||||| |||||||||||||||||    
T  3544475 gttcgaaccccggactccctacttattcacattataaggtgaattcta 3544428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6637765 - 6637718
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||||    
T  6637765 gttcgaaccccgaacaccccacttattcatcttataaggtgaattcta 6637718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 24234113 - 24234070
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||| |||||||||||  |||||||||||||||||    
T  24234113 gaaccccggacaccccacttattcatcttataaggtgaattcta 24234070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 31480324 - 31480383
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    ||||||||||| |||| |||||||||||| ||| || ||||||||||| |||||| ||||    
T  31480324 ttcgaaccccgaacaccccacttattcaccttaaaacgtgaattctaaccactagactac 31480383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35747525 - 35747482
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaat 44  Q
    |||||||| |||||||| |||||||||||| |||||||||||||    
T  35747525 gttcgaactccggacaccccacttattcaccttataaggtgaat 35747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49039488 - 49039426
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctac 61  Q
    ||||||||||||||||| |||||||||||| ||  | |||||||||||||  |||||||||||    
T  49039488 gttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagccactaggctac 49039426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42411497 - 42411431
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||| |||||| || ||||| |||||  ||||||||||| ||||    
T  42411497 gttcgaaccccggacaccccacttatttactttaaaaagtgaatttctagccactaggctacttgac 42411431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53355009 - 53354944
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||| |||||| ||  |||| |||||| ||||||||||||||||    
T  53355009 gttcgaaccccggacaccccacttatttacttta-aaaatgaatttctaaccactaggctacctgac 53354944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 53815748 - 53815813
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||||||| || || ||||| |||||  ||||||||||||||||    
T  53815748 gttcgaaccccggacaccccacttattcactata-aaagtgaatttctagccactaggctacctgac 53815813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 548918 - 548865
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||| |||||||||||| |||||||||||||| ||   |||||||||||||||    
T  548918 gacaccccacttattcaccttataaggtgaattttagctactaggctacctgac 548865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7768831 - 7768798
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  7768831 gttcgaaccccggacaccccacttattcacttta 7768798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 13073190 - 13073133
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||  ||||||||| || |||||||||||||||||   |||||||||||||||    
T  13073190 cccggacatcccacttattaaccttataaggtgaattctagctactaggctacctgac 13073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21476124 - 21476059
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||  |||||||||||  |||||| ||||||||||  ||||||||||| ||||    
T  21476124 gttcgaactccggacatcccacttattcatcttataaagtgaattctagccactaggctacttgac 21476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4045111 - 4045063
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    |||||||||||  |||| |||||||||||||||| || |||||||||||    
T  4045111 gttcgaaccccaaacaccccacttattcactttaaaaagtgaattctaa 4045063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 6330971 - 6330935
Alignment:
Q  9 cccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  6330971 cccggacaccccacttattcaccttataaggtgaatt 6330935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 31152581 - 31152617
Alignment:
Q  12 ggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  31152581 ggacactccacttatccaccttataaggtgaattcta 31152617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37889649 - 37889606
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||||||||||||||||  |||||||||||||| |||||||||||    
T  37889649 gttcgaaccccggacacctcacttattcacttt-taaggtgaatt 37889606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55677157 - 55677189
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  55677157 gttcgaactccggacactccacttattcacttt 55677189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8682433 - 8682498
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| ||| |||||||| | |||||||||||||||| |||||||||||||||||    
T  8682433 gttcgaaccccggacagtccccttattcattatataaggtgaattctagtcactaggctacctgac 8682498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14683928 - 14683993
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  14683928 gttcgaaccccggacatcccacttattcaccttataaggtgaattctagtcactagactacctgac 14683993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15042408 - 15042343
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||| ||||    
T  15042408 gttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactacgctacttgac 15042343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4798584 - 4798519
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||  |||||| |||||||||    
T  4798584 gttcgaaccccggacaccccacttattcaccttgtaaggtgaattctagccactagactacctgac 4798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24074558 - 24074623
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| |||||||  ||||||||||| |||||||||||||||||  ||||||||||||||||    
T  24074558 gttcgaacctcggacacctcacttattcaccttataaggtgaattctagccactaggctacctgac 24074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25689431 - 25689366
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| | ||||| |||| |||||| ||||||||||| ||||||||||||||||    
T  25689431 gttcgaaccccggacaccctacttaatcaccttataaagtgaattctaaccactaggctacctgac 25689366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36359761 - 36359696
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||  |||||| |||||||||    
T  36359761 gttcgaatcccggacaccccacttattcaccttataaggtgaattctagccactagactacctgac 36359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43468748 - 43468683
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||  |||||||||| |||||    
T  43468748 gttcgaactccggacaccccacttattcaccttataaggtgaattctagccactaggctatctgac 43468683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34073282 - 34073235
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  34073282 gttcgaaccccggacaccccacttattcaccttataaggtgaattcta 34073235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5184930 - 5184876
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcacta 55  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||| |||||    
T  5184930 gttcgaaccctggacaccccacttattcaccttataaggtgaattctaaccacta 5184876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9737403 - 9737340
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||| ||||||||| ||||||||||||||||| ||  ||||||||||||||||    
T  9737403 gttcgaactccggacaccccacttatttactttataaggtgaattata--cactaggctacctgac 9737340  T

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Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28378864 - 28378930
Alignment:
Q  1 gttcgaaccccggacactcc-acttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||| |||||  |||||||||    
T  28378864 gttcgaaccccggacacccccacttattcaccttataaggtgaattctaaccactaaactacctgac 28378930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7649580 - 7649645
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| || |||| |||||||||||| ||| |||||||||||||  ||||||||||||||||    
T  7649580 gttcgaacctcgaacaccccacttattcaccttacaaggtgaattctagccactaggctacctgac 7649645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10184844 - 10184779
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||  || ||| |||||||||    
T  10184844 gttcgaactccggacactccatttattcaccttataaggtgaattctagccattagactacctgac 10184779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14010815 - 14010750
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||  ||||| |||| |||||    
T  14010815 gttcgaaccccggacaccccacttattcaccttataaggtaaattctagccactaagctatctgac 14010750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17987492 - 17987427
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||| ||  ||||||| ||||||||    
T  17987492 gttcgaaccccggacaccccaattattcaccttataaggtgaattatagccactaggatacctgac 17987427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 23239180 - 23239241
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| |||||||||||| |||||| ||||||| ||| |||||| |||||||||    
T  23239180 gaaccccggacaccccacttattcaccttataaagtgaattttaaccactagactacctgac 23239241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43875020 - 43874955
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| || ||||| |||||||||||| ||||||||||||||||||  |||||||||| ||||    
T  43875020 gttcgaacaccagacaccccacttattcaccttataaggtgaattctaacaactaggctacttgac 43874955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30542816 - 30542880
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||| ||| |||| |||||||| |||||||||||||||||| ||||||  |||||||    
T  30542816 gttcgaaccccgaacattccatttattcaccttataaggtgaattctaaccactagaatacctga 30542880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 37154567 - 37154631
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| |||||| ||| |||||||| |||||||||||||||||  |||||| |||||||||    
T  37154567 ttcgaaccctggacaccccatttattcaccttataaggtgaattctaggcactagactacctgac 37154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40249923 - 40249856
Alignment:
Q  1 gttcgaaccccggacact--ccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||| ||||||||   |||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  40249923 gttcgaactccggacacctcccacttattcaccttataagatgaattctaaccactaggctacctgac 40249856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42761908 - 42761864
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||||||| | ||||||||||||||||||||||||||||||||||    
T  42761908 gttcgaactctggacactccacttattcactttataaggtgaatt 42761864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33570472 - 33570425
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  33570472 gttcgaacctcggacaccccacttattcaccttataaggtgaattcta 33570425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33982242 - 33982289
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||    
T  33982242 gttcgaaccccagacaccgcacttattcactttataaggtgaattcta 33982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2696585 - 2696650
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||| | ||||||||||||||||    
T  2696585 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctgaccactaggctacctgac 2696650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2800071 - 2800136
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  2800071 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 2800136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7314785 - 7314850
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt-ctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||||| ||| ||||||||||| |||||    
T  7314785 gttcgaaccccggacaccccacttattcacttta-aaagtgaattcctagtcactaggctatctgac 7314850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3379690 - 3379626
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||  || || ||||||||||    
T  3379690 gttcgaaccccg-acaccccacttattcaccttataaggtgaattctagccattaagctacctgac 3379626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9525009 - 9525074
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| | |||||||||| |||||||||||||||||  |  |||||||||||||    
T  9525009 gttcgaaccccagacaccctacttattcaccttataaggtgaattctagccgttaggctacctgac 9525074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10970318 - 10970383
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||| ||||||| |||| |||||||||||| ||||||| |||||||||  ||||||| ||||||||    
T  10970318 gttcaaaccccgaacaccccacttattcaccttataagatgaattctagccactaggttacctgac 10970383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13762555 - 13762490
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| |||||||||||| ||| ||||| ||||||||||| ||| ||| |||||    
T  13762555 gttcgaaccacggacaccccacttattcaccttacaaggtaaattctaatcattagactatctgac 13762490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14684259 - 14684194
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||  ||||||| |||||||||||  |||||||||||||| ||  ||||||||||||||||    
T  14684259 gttcgaacttcggacaccccacttattcatcttataaggtgaattatagccactaggctacctgac 14684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23857366 - 23857301
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| ||||||| | |||||||||  ||||| |||||||||||  ||||||||||||||||    
T  23857366 gttcgaacctcggacacccgacttattcatcttatacggtgaattctagccactaggctacctgac 23857301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24608526 - 24608461
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| | |||||||||| |||||||||||||||||  |  |||||||||||||    
T  24608526 gttcgaaccccagacaccctacttattcaccttataaggtgaattctagccgttaggctacctgac 24608461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33524448 - 33524513
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||| ||  |||||  |||||||||    
T  33524448 gttcgaaccccggacaccccacttattcactctataaggttaattttagccactaaactacctgac 33524513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39258632 - 39258697
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| || |||||| |||||||||||  ||||||||| |||||||  ||||||||||||||||    
T  39258632 gttcgaatcctggacaccccacttattcatcttataaggtaaattctagccactaggctacctgac 39258697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41125476 - 41125412
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||  |||||||  |||||||||||| |||||||||||||||| | ||||||||||||||||    
T  41125476 gttcgaagtccggacatcccacttattcaccttataaggtgaattct-agcactaggctacctgac 41125412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7603789 - 7603849
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    |||| |||||||||||| |||||||||||  ||||| |||||||||||  |||||||||||    
T  7603789 gttcaaaccccggacaccccacttattcatcttatagggtgaattctagccactaggctac 7603849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39484413 - 39484353
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    |||||||  |||||||| |||||||||||  |||||||||||||||||| ||||| |||||    
T  39484413 gttcgaatgccggacaccccacttattcatcttataaggtgaattctaaccactacgctac 39484353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6064429 - 6064476
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||||||    
T  6064429 gttcgaacctcggacacttcacttattcagcttataaggtgaattcta 6064476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10199785 - 10199738
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||  |||| |||||||||||| |||||||||||||||||    
T  10199785 gttcgaaccccaaacaccccacttattcaccttataaggtgaattcta 10199738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10309703 - 10309656
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  10309703 gttcaaaccccgaacaccccacttattcactctataaggtgaattcta 10309656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 11823018 - 11823061
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  11823018 gaaccccggacaccccacttattcaccttataagatgaattcta 11823061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 37128798 - 37128845
Alignment:
Q  19 ccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||||||| || |||||||||| ||||||| |||||||||    
T  37128798 ccacttattcactttaaaaagtgaattctagtcactagactacctgac 37128845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 42688109 - 42688156
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaa 49  Q
    ||||||||||| |||| ||||||||| || ||||||||||||||||||    
T  42688109 ttcgaaccccgaacaccccacttatttaccttataaggtgaattctaa 42688156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44070411 - 44070364
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||||| ||||||| | |||||||||| |||||||||||||||||    
T  44070411 gttcgaacctcggacaccctacttattcaccttataaggtgaattcta 44070364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8740699 - 8740637
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||| |||||||| | |||||||||  |||||||||||||||||  ||||| |||||||    
T  8740699 gttcgaactccggacaccctacttattcatcttataaggtgaattctagccactaagctacct 8740637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22426453 - 22426518
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattc-taatcactaggctacctgac 66  Q
    ||||||||||| ||||| ||| |||||||||||| || |||||||| ||| ||||||||||||||||    
T  22426453 gttcgaacccctgacaccccatttattcacttta-aaagtgaattcttaaccactaggctacctgac 22426518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22438627 - 22438570
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactag 56  Q
    |||| ||| ||||||||||||||||||||| ||  | |||||||||||||||||||||    
T  22438627 gttcaaactccggacactccacttattcaccttaaaaaaggtgaattctaatcactag 22438570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31129354 - 31129419
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| |||||||||||||||| || ||||| || ||  ||||||||||||||||    
T  31129354 gttcgaaccccggacaccccacttattcacttta-aaagtgaatttttagccactaggctacctgac 31129419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 34632065 - 34632099
Alignment:
Q  32 ttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||||||||||||||| |||||||||    
T  34632065 ttataaggtgaattctaatcactagactacctgac 34632099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38790615 - 38790550
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||| ||||| |||||||||||||||| || ||||| |||||  ||||||||||||||||    
T  38790615 gttcgaaccccagacaccccacttattcacttta-aaagtgaatttctaggcactaggctacctgac 38790550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44136320 - 44136274
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattct 47  Q
    ||||||||||| |||||  || |||||||||||||||||||||||||    
T  44136320 gttcgaaccccagacacctcaattattcactttataaggtgaattct 44136274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13702395 - 13702330
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| | |||||  ||||||||||| |||||||||||||||||  ||||| |||| |||||    
T  13702395 gttcgaacctcagacacctcacttattcaccttataaggtgaattctagccactaagctagctgac 13702330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 27558902 - 27558849
Alignment:
Q  13 gacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||| |||||||||||| |||| ||||||||||||  |||||| |||||||||    
T  27558902 gacaccccacttattcaccttattaggtgaattctagccactagtctacctgac 27558849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 220405 - 220338
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||| ||  | |||||||||||||| |||||| |||| ||||    
T  220405 gttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 220338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 689560 - 689493
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||| ||  | |||||||||||||| |||||| |||| ||||    
T  689560 gttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 689493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 734028 - 733961
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||| ||  | |||||||||||||| |||||| |||| ||||    
T  734028 gttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 733961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 857924 - 857857
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttt--ataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||| ||||||||| |||||||||||| ||  | |||||||||||||| |||||| |||| ||||    
T  857924 gttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaaccactagactacttgac 857857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8034582 - 8034622
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtg 41  Q
    |||||||||||| |||| |||||||||||| ||||||||||    
T  8034582 gttcgaaccccgaacaccccacttattcaccttataaggtg 8034622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13537354 - 13537310
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||    
T  13537354 gttcgaaccccagacaccccacttattcatcttataaggtgaatt 13537310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13626902 - 13626858
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||    
T  13626902 gttcgaaccccagacaccccacttattcatcttataaggtgaatt 13626858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14012664 - 14012708
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||||||  |||||||| |||||||||||| ||||||||||||||    
T  14012664 gttcgaagtccggacaccccacttattcacattataaggtgaatt 14012708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19957364 - 19957321
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  19957364 gttcgaaccccggacaccccacttattcacctt-taaggtgaatt 19957321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 30461607 - 30461647
Alignment:
Q  20 cacttattcactttataaggtgaattctaatcactaggcta 60  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  30461607 cacttattcaccttataaggtgaattctagccactaggcta 30461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30942642 - 30942598
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaatt 45  Q
    |||||||||||| |||| ||||||||| || ||||||||||||||    
T  30942642 gttcgaaccccgaacaccccacttatttaccttataaggtgaatt 30942598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44923340 - 44923276
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    ||||||||||||||| | ||| |||||||  |||||||||||| | || ||||||| ||||||||    
T  44923340 gttcgaaccccggactccccatttattcatcttataaggtgaactatagtcactagactacctga 44923276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 166648 - 166712
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| ||| ||||    
T  166648 gttcgaaccccggacactccacttattcatcttataaggtgaattctagtcactagactatctga 166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26874 - 26812
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||| || ||||| ||||||||||| ||||||||||||||||||| || ||||||||||    
T  26874 gttcgaactccagacaccccacttattcattttataaggtgaattctaaccattaggctacct 26812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 108404 - 108340
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctga 65  Q
    |||| |||||||||||| |||||||||||||||| || || |||||||  || ||| ||||||||    
T  108404 gttcaaaccccggacaccccacttattcactttaaaaagtaaattctagccagtagactacctga 108340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 2544 - 2605
Alignment:
Q  5 gaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |  |||||| |||||||||    
T  2544 gaaccccggacaccccacttattcaccttataaggtgaattccagccactagactacctgac 2605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9378 - 9443
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||  ||| ||||||||||||||||| |||||||||||||||||  |||||||||| |||||    
T  9378 gttcgaattccgaacactccacttattcaccttataaggtgaattctagccactaggctatctgac 9443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49872 - 49937
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||||  |||||| |||||||||    
T  49872 gttcgaaccccgtacaccccacttattcaacttataaggtgaattctagccactagactacctgac 49937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 111740 - 111679
Alignment:
Q  2 ttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacct 63  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||  |  |||||||||||||    
T  111740 ttcgaaccccggacactccatttatccaccttataaggtgaatttcagccactaggctacct 111679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1473 - 1533
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctac 61  Q
    |||| |||||||||||| |||||||||||  ||||| |||||||||||  |||||||||||    
T  1473 gttcaaaccccggacaccccacttattcatcttatagggtgaattctagccactaggctac 1533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 946 - 993
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||| ||| ||||| |||||||||||| |||||||||||||||||    
T  946 gttcgaatcccagacaccccacttattcaccttataaggtgaattcta 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22476 - 22522
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  22476 gttcgaaccccgaacac-ccacttattcaccttataaggtgaattcta 22522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47360 - 47313
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattcta 48  Q
    ||||||| ||| ||||| |||||||||||| |||||||||||||||||    
T  47360 gttcgaatcccagacaccccacttattcaccttataaggtgaattcta 47313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8612 - 8666
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcacta 55  Q
    |||||||||||| |||| | |||||||||| |||||| ||||||||||| |||||    
T  8612 gttcgaaccccgaacaccctacttattcaccttataatgtgaattctaaccacta 8666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7128 - 7193
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaa-ttctaatcactaggctacctgac 66  Q
    ||||||||||||||||| ||| |||||||||||| || ||||| |||||  ||||||||||||||||    
T  7128 gttcgaaccccggacaccccatttattcacttta-aaagtgaatttctagccactaggctacctgac 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17974 - 17941
Alignment:
Q  1 gttcgaaccccggacactccacttattcacttta 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  17974 gttcgaaccccagacactccacttattcacttta 17941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 101883 - 101948
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    |||||||||||  |||  |||||||||||| |||||||||||||||||  |||||| |||| ||||    
T  101883 gttcgaaccccaaacatcccacttattcaccttataaggtgaattctagccactagactacgtgac 101948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43740 - 43675
Alignment:
Q  1 gttcgaaccccggacactccacttattcactttataaggtgaattctaatcactaggctacctgac 66  Q
    ||||||||| || |||| |||||||||||| |||||||||||| ||||   |||| ||||||||||    
T  43740 gttcgaacctcgaacaccccacttattcaccttataaggtgaaatctagcaactaagctacctgac 43675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 440459 - 440518
Alignment:
Q  9 cccggacactccacttattcactttataa--ggtgaattctaatcactaggctacctgac 66  Q
    |||| |||| |||||||||||| ||| ||  |||||||||||| ||||||||||||||||    
T  440459 cccgaacaccccacttattcaccttaaaaaaggtgaattctaaccactaggctacctgac 440518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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