View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18025_low_46 (Length: 229)
Name: NF18025_low_46
Description: NF18025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18025_low_46 |
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Alignment Details
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 12295467 - 12295307
Alignment:
| Q |
18 |
gtattttagtagtttcgatgatttaataaagccagttgggttttagttggaggagtaagtgtaaagattctgtttctggaaacttttgtaattgaccaaa |
117 |
Q |
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| T |
12295467 |
gtattttagtagtttcaatgatttaataaagccagttgggttttagttggaggagtaagtgtaaagattctgtttctggaaacttttgtaattgaccaaa |
12295368 |
T |
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| Q |
118 |
ataccatatgaatagtgtgaaatcacttaaatacctatagtccgttttatgttgtgacttt |
178 |
Q |
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| T |
12295367 |
ataccatatgaatagtgtgaaatcacttaaatacctatagtccgttttatgttgtgacttt |
12295307 |
T |
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