View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18026_high_1 (Length: 1095)
Name: NF18026_high_1
Description: NF18026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18026_high_1 |
 | |
|
| [»] scaffold0671 (1 HSPs) |
| | |
|
| [»] scaffold0065 (1 HSPs) |
| | |
|
| [»] scaffold0359 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0076 (1 HSPs) |
| | |
|
| [»] scaffold0585 (1 HSPs) |
| | |
|
| [»] scaffold0146 (1 HSPs) |
| | |
|
| [»] scaffold0096 (1 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0075 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 559; Significance: 0; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Complemental strand, 18774658 - 18774040
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18774658 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
18774559 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
18774558 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaatggaa |
18774459 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18774458 |
taaaagacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggt |
18774359 |
T |
|
| Q |
308 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774358 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
18774259 |
T |
|
| Q |
408 |
caccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaa |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774258 |
caccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaa |
18774159 |
T |
|
| Q |
508 |
caatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaatttt |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
18774158 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttctgcaagcaatttttatcaattcataattaaaagtcaaatatgatcaatttt |
18774059 |
T |
|
| Q |
608 |
cacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
18774058 |
cacaaaatagtgttcatca |
18774040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 206 - 626
Target Start/End: Complemental strand, 16417711 - 16417292
Alignment:
| Q |
206 |
aataaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtg |
305 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16417711 |
aataaaagacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtg |
16417612 |
T |
|
| Q |
306 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagccta |
405 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
16417611 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgattgaaaccacaaatcagccta |
16417512 |
T |
|
| Q |
406 |
aacaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcatt |
505 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16417511 |
aacaccaattcaaaaccaaattctca-ttttcaactcaaatcattgtcaaaattaatctcaatacataattttcgtttctttttggcacaccctttcatt |
16417413 |
T |
|
| Q |
506 |
aacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaatt |
605 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16417412 |
aacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaatt |
16417313 |
T |
|
| Q |
606 |
ttcacaaaatagtgttcatca |
626 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
16417312 |
ttcataaaatagtgttcatca |
16417292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 8 - 354
Target Start/End: Complemental strand, 17462721 - 17462373
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
17462721 |
catcatcatgatcatcaagaccagacaccctaattcattgatttgtcttgaaaccatttcttgtattcatgttaatttacttcagccataggaaataacg |
17462622 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcat--ttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattg |
205 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17462621 |
atagattaatttggttgaaggaatcttaagagttatttgcatttttttctttgtaattcaacaagtgtccctcctacctatatataagacacgaaaattg |
17462522 |
T |
|
| Q |
206 |
aat-aaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcc-tttcttg |
303 |
Q |
| |
|
||| ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17462521 |
aataaaaaggcaagttaatttttgtt--aaaaaagtgagtaattgctctttaggttcttgattggaccttgtattgatcatatcaagaatccttttcttg |
17462424 |
T |
|
| Q |
304 |
tggtgatcttcattccatagacttatcattttctaggattagaaagtgtgg |
354 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17462423 |
tggtgatcttcattccatagacttataattttctaggattagaaagtgtgg |
17462373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 350 - 626
Target Start/End: Complemental strand, 17459868 - 17459593
Alignment:
| Q |
350 |
tgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcatttttcaactcaaatcat |
449 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17459868 |
tgtggcgtccctaaactctccattctatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcatttt-caactcaaatcat |
17459770 |
T |
|
| Q |
450 |
tgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgcgcctttaatta |
549 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||| ||||||| | ||||||||| |
|
|
| T |
17459769 |
tgtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaacaataattttagatcatttcttatgttttgagactttaatta |
17459670 |
T |
|
| Q |
550 |
atctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17459669 |
atctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
17459593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 8 - 230
Target Start/End: Complemental strand, 17470628 - 17470404
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17470628 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
17470529 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttt-tctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattga |
206 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
17470528 |
atagattaatttggctgaaggaatcttaagagttatttgcattttatatttgtaattcagcaagtgtccctcctacctatatataggacacaaaaattga |
17470429 |
T |
|
| Q |
207 |
at-aaaagacaagttaatttttgtt |
230 |
Q |
| |
|
|| ||||| |||||||||||||||| |
|
|
| T |
17470428 |
ataaaaaggcaagttaatttttgtt |
17470404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 17465122 - 17465064
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccattt |
66 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17465122 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccattt |
17465064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 240 - 361
Target Start/End: Original strand, 18446160 - 18446280
Alignment:
| Q |
240 |
tgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcc-atagacttatcattttcta |
338 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||| | ||||| |||||||||||| |||||||||||| || ||| ||| |||||||||||| ||||| |
|
|
| T |
18446160 |
tgagcaattgctcttt-ggttctggattggaccaatt-ttgattatatcaagaatcttttcttgtggtggtcctcaatcccatagacttatcactttctt |
18446257 |
T |
|
| Q |
339 |
ggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
18446258 |
ggattagaaagtgtggcgtccct |
18446280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 20730984 - 20731028
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20730984 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20731028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 555; Significance: 0; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 555; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Complemental strand, 13180244 - 13179623
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13180244 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
13180145 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13180144 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaa |
13180045 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180044 |
taaaagacaagttaattttcgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
13179945 |
T |
|
| Q |
308 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13179944 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
13179845 |
T |
|
| Q |
408 |
caccaattc--aaaaccaaattctcatttttcaact-caaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcat |
504 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13179844 |
caccaattcaaaaaaccaaattctcatttttcaactccaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcat |
13179745 |
T |
|
| Q |
505 |
taacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaat |
604 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13179744 |
taacaatatttttagttcatttcttgtgttttgtgcttttaattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaat |
13179645 |
T |
|
| Q |
605 |
tttcacaaaatagtgttcatca |
626 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
13179644 |
tttcacaaaatagtgttcatca |
13179623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 555; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Complemental strand, 13184902 - 13184281
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13184902 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
13184803 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13184802 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaa |
13184703 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184702 |
taaaagacaagttaattttcgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
13184603 |
T |
|
| Q |
308 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184602 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
13184503 |
T |
|
| Q |
408 |
caccaattc--aaaaccaaattctcatttttcaact-caaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcat |
504 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184502 |
caccaattcaaaaaaccaaattctcatttttcaactccaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcat |
13184403 |
T |
|
| Q |
505 |
taacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaat |
604 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184402 |
taacaatatttttagttcatttcttgtgttttgtgcttttaattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaat |
13184303 |
T |
|
| Q |
605 |
tttcacaaaatagtgttcatca |
626 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
13184302 |
tttcacaaaatagtgttcatca |
13184281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Complemental strand, 33758322 - 33757706
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
33758322 |
catcatcatgatcatcaagaccagccactctcattcatttatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaatactg |
33758223 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattga |
206 |
Q |
| |
|
|||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
33758222 |
atagattaatttggctgaag-aatcttaagagttatttgcattttttctttgtaattcaacaagtgtccctcctacctatatatatgacacgaaaattga |
33758124 |
T |
|
| Q |
207 |
ataaaa-gacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtg |
305 |
Q |
| |
|
|||||| | |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
33758123 |
ataaaaaggcaagttaatttttgttaaaaaa--gcgagtaattgctctttaggttctagattggaccttgtattgatcatataaagaatcctttcttgtg |
33758026 |
T |
|
| Q |
306 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagccta |
405 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33758025 |
gtgatcttcattcaatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagccta |
33757926 |
T |
|
| Q |
406 |
aacaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcatt |
505 |
Q |
| |
|
|||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
33757925 |
aacaccaattcaaaaccaaattataatttt-caactcaaaccattgtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcatt |
33757827 |
T |
|
| Q |
506 |
aacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaatt |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
33757826 |
aacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaatt |
33757727 |
T |
|
| Q |
606 |
ttcacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
33757726 |
ttcacaaaatagtgttcatca |
33757706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 890 - 1095
Target Start/End: Original strand, 25866 - 26071
Alignment:
| Q |
890 |
tttacaccaaatgttcaaatatccagtctctcataattacataagctttttcagcatcctcgtcttcggccagagatccagatcggtgggcaaatccgtg |
989 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| || |||| ||||||||||| |||||| ||| |||| ||| ||||||||||||||| || |
|
|
| T |
25866 |
tttacaccaaatgttcatgtatccagtctctcataattacgtaggcttgttcagcatccttgtcttcttccacagattcaggtcggtgggcaaatccatg |
25965 |
T |
|
| Q |
990 |
acctctaccagagaatatcactactttggagcctctgtcaattttagtttgaatattttttatttcacttacagcacaaagtgggtcattgtcccctaaa |
1089 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25966 |
acctctaccagggaatatcactactttggagccactatcaattgtagtctgaatattttttatttcacttacagcacaaattgggtcattgtcccctaaa |
26065 |
T |
|
| Q |
1090 |
ataaac |
1095 |
Q |
| |
|
|||||| |
|
|
| T |
26066 |
ataaac |
26071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 683 - 891
Target Start/End: Original strand, 25619 - 25815
Alignment:
| Q |
683 |
ttactatgttgtgctctatacacaacctgatctatagcgtaatacaccagttatatgtccctaattcaactactaagtgggggatctagtatttaggttg |
782 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||||| ||| |
|
|
| T |
25619 |
ttactatgttttgctctatactcaacctgatctatagcctaatacaccaattataagtccccaattcaactactaagtgggggat------------ttg |
25706 |
T |
|
| Q |
783 |
ctaatccatatgaaattcattgacttaaaaattggatccaaaatgttcacaaaaaattgtataggaaagttaacagacagtctacaaacacaaaaatcat |
882 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||| || |||||||||||||||||||| |
|
|
| T |
25707 |
ctaatccataagaaattcattgacttaaaaattggatccaaaatgttcacaaaaaagtgtacaagaaagttgacaggcattctacaaacacaaaaatcat |
25806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 16019571 - 16019451
Alignment:
| Q |
240 |
tgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttc-attccatagacttatcattttcta |
338 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||| || || ||| |||||||||| ||||| |
|
|
| T |
16019571 |
tgagcaattgctcttt-ggttctggatttgaccaatt-ttgatcatatcaagaatcctttcttgtggtgatcctcaatcccagagacttatcactttctt |
16019474 |
T |
|
| Q |
339 |
ggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
|||||||||||||| | |||||| |
|
|
| T |
16019473 |
ggattagaaagtgtagtgtccct |
16019451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 5553584 - 5553646
Alignment:
| Q |
319 |
catagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
5553584 |
catagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
5553646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 22271244 - 22271285
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtc |
358 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
22271244 |
tccatagacttatcactttctgggattagaaagtgtggcgtc |
22271285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 539; Significance: 0; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Original strand, 37260129 - 37260746
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
37260129 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
37260228 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37260229 |
atagattaatttggatgaaggaatcctaagagttatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaa |
37260328 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37260329 |
taaaagacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
37260428 |
T |
|
| Q |
308 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
37260429 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccaattcttgtttgaaaccacgaatcagcctaaa |
37260528 |
T |
|
| Q |
408 |
caccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaa |
507 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
37260529 |
caccaattcaaaatcaaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattga |
37260627 |
T |
|
| Q |
508 |
caatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaatttt |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37260628 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaatttt |
37260727 |
T |
|
| Q |
608 |
cacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
37260728 |
cacaaaatagtgttcatca |
37260746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 626 - 725
Target Start/End: Original strand, 21352240 - 21352339
Alignment:
| Q |
626 |
atgttatcttgaagcggtttggactgagtttaatttctttatgttattttagtttctttactatgttgtgctctatacacaacctgatctatagcgtaat |
725 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21352240 |
atgttatgttgaagcagtttggactgagtttaatttctttatgttattttagtttcattactatgttgttctctatacacaacctgatctatagcgtaat |
21352339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 890 - 1005
Target Start/End: Original strand, 21352468 - 21352585
Alignment:
| Q |
890 |
tttacaccaaatgttcaaatatccagtctctcataattacataagctttttcagcatcct--cgtcttcggccagagatccagatcggtgggcaaatccg |
987 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
21352468 |
tttacaccaaatgttcaaatatccagtctctcataattacataagcttgttcagcatcctcgcgtcttcgttcagagatccggatcggtgggcaaatccg |
21352567 |
T |
|
| Q |
988 |
tgacctctaccagagaat |
1005 |
Q |
| |
|
||||||||| ||| |||| |
|
|
| T |
21352568 |
tgacctctatcagggaat |
21352585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 831 - 891
Target Start/End: Original strand, 21352357 - 21352417
Alignment:
| Q |
831 |
acaaaaaattgtataggaaagttaacagacagtctacaaacacaaaaatcatatgcatgtt |
891 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21352357 |
acaaaaaattgtataggaaagttgacagacagtctacaaatacaaaaatcatatgcatgtt |
21352417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 6473884 - 6473948
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
6473884 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
6473948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 22062186 - 22062122
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
22062186 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
22062122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 359
Target Start/End: Complemental strand, 20190474 - 20190431
Alignment:
| Q |
316 |
ttccatagacttatcattttctaggattagaaagtgtggcgtcc |
359 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
20190474 |
ttccatagacttatcagtttcttggattagaaagtgtggcgtcc |
20190431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 20127181 - 20127245
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
20127181 |
tccatagacttatcgctttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
20127245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0671 (Bit Score: 534; Significance: 0; HSPs: 1)
Name: scaffold0671
Description:
Target: scaffold0671; HSP #1
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Original strand, 1847 - 2463
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1847 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
1946 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1947 |
atagattaatttggctgaaggaatcctaagagttatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaa |
2046 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2047 |
taaaagacaagttaatttttgttaaaaaaa-gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
2145 |
T |
|
| Q |
308 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
2146 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctgcattccaattcttgtttgaaaccacaaatcagcctaaa |
2245 |
T |
|
| Q |
408 |
caccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaa |
507 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
2246 |
caccaattcaaaaccaaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacatgattttcgtttctttttggcacaccttttcattaa |
2344 |
T |
|
| Q |
508 |
caatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaatttt |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2345 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaatttt |
2444 |
T |
|
| Q |
608 |
cacaaaatagtgttcatca |
626 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
2445 |
ctcaaaatagtgttcatca |
2463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 514; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Original strand, 16156756 - 16157365
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16156756 |
catcatcatgatcatcaagaccagccac--------attgatttgtcgtgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
16156847 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16156848 |
atagattaatttggcggaaggaatcctaagagttatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaa |
16156947 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156948 |
taaaagacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
16157047 |
T |
|
| Q |
308 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16157048 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaa |
16157147 |
T |
|
| Q |
408 |
caccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaa |
507 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
16157148 |
caccaattcaaaaccaaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcatttctttttggcacaccctttcattaa |
16157246 |
T |
|
| Q |
508 |
caatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaatttt |
607 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16157247 |
caatatttttagttcatttctagtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaatttt |
16157346 |
T |
|
| Q |
608 |
cacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
16157347 |
cacaaaatagtgttcatca |
16157365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 500; E-Value: 0
Query Start/End: Original strand, 8 - 627
Target Start/End: Complemental strand, 21368997 - 21368380
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21368997 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgttaccattttttgtattcatgttaatttacttcagccataggaaataatg |
21368898 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattga |
206 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
21368897 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattga |
21368798 |
T |
|
| Q |
207 |
ataaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtgg |
306 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21368797 |
ataaaaaggaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtgg |
21368700 |
T |
|
| Q |
307 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaa |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21368699 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcatccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaa |
21368600 |
T |
|
| Q |
407 |
acaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcatta |
506 |
Q |
| |
|
||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
21368599 |
acaccaattcaaaactaaattct-aattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcatta |
21368501 |
T |
|
| Q |
507 |
acaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattt |
606 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21368500 |
acaatatttttagttcatttcctgtgttttgtgcctttaattaatctttcagcaaacaacttttatcaattcataattaaaagtcaaatatgaacaattt |
21368401 |
T |
|
| Q |
607 |
tcacaaaatagtgttcatcat |
627 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
21368400 |
tcacaaaatagtgttcatcat |
21368380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 8 - 627
Target Start/End: Complemental strand, 22708028 - 22707433
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| || |||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
22708028 |
catcatcataatcatcaagaccaacca---tcattcattgatttgtcttgtaaccattttttatattgatgttaatttactttagccataggaaataatg |
22707932 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
|| ||||||||| |||||||||||| |||| | ||||||| |||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
22707931 |
attgattaattttgctgaaggaatcttaagtgttatttgccttttcctttgtaattcggcaagtgtcattcctacctatatataggacacgaaaattgaa |
22707832 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||| ||||| | ||||||| | |||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
22707831 |
taaaaattaagttgaattttgttaaaaa---gcgagtaattgctctttaggttatgaattggaccttgtat---------caagaatcctttcttgtggt |
22707744 |
T |
|
| Q |
308 |
gatcttcatt-ccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaa |
406 |
Q |
| |
|
|||||| ||| |||||| ||||||| ||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
22707743 |
gatctttatttccataggcttatcagtttctaggattagaaagtgaggcgtccctaaactttctattgcatttcttgtttgaaaccacaaatcaacctaa |
22707644 |
T |
|
| Q |
407 |
acaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcatta |
506 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| |||| | |||||||| | || || |
|
|
| T |
22707643 |
acaccaattcaaaaccaaattctcatt-----attcaaatcattatcaaaattaatcccaatacataattttcttttccttttggcacatcatt---ata |
22707552 |
T |
|
| Q |
507 |
acaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattt |
606 |
Q |
| |
|
|||||||||| | | |||||||||||||||| |||| ||| |||||||| | |||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
22707551 |
acaatattttcattccatttcttgtgttttgtgcctataa-taatctttaatcaagcaacttttatcaattcataattaaaagtcaaatataaacaattt |
22707453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 9595478 - 9595434
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
9595478 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
9595434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 9646441 - 9646397
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
9646441 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
9646397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 32706452 - 32706493
Alignment:
| Q |
320 |
atagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
32706452 |
atagacttatcactttcttggattagaaagtgtggtgtccct |
32706493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 510; Significance: 0; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 8 - 622
Target Start/End: Original strand, 11475365 - 11475977
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
11475365 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagctttaggaaataatg |
11475464 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcatttttctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattgaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
11475465 |
atagattaatttggctgaaggaatcctaagagttatttgcatatttctttgtaattcagcaagtgtccctcctacctttatataggacacgaaaattgaa |
11475564 |
T |
|
| Q |
208 |
taaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
307 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11475565 |
taaaagacaagttaatttttgttaaaaaaa-gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
11475663 |
T |
|
| Q |
308 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaa |
407 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
11475664 |
gatcttcattccatggacttatcattttctaggattagaaagtgtggcgtctctaaactctccattccatttcttgtctgaaaccacaaatcagcctaaa |
11475763 |
T |
|
| Q |
408 |
caccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaa |
507 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
11475764 |
caccaattcaaaaccaaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattaa |
11475862 |
T |
|
| Q |
508 |
caatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaatttt |
607 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11475863 |
caatatttttagttcatttcttaagttttgtgcctttaattaatctttcagcaatcaacttttatcaattcataattaaaagtcaaatatgaacaatttt |
11475962 |
T |
|
| Q |
608 |
cacaaaatagtgttc |
622 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
11475963 |
cacaaaatagtgttc |
11475977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 239 - 626
Target Start/End: Original strand, 34455690 - 34456079
Alignment:
| Q |
239 |
gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcc-atagacttatcattttct |
337 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
34455690 |
gtgagtaactgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcccacaaacttatcattttct |
34455789 |
T |
|
| Q |
338 |
aggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcatttttc |
437 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||| || ||||| |
|
|
| T |
34455790 |
acgattagaaagtgtggcgtccctaaaccctccattccatttcttgtttgaatccacaaatcagcctaaacacctattcaaatccaaattatc-gttttc |
34455888 |
T |
|
| Q |
438 |
aactcaaatcattgtc-aaaattaatcccaatacataattttcgt-ttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttt |
535 |
Q |
| |
|
|||||||| |||||| |||||||||||||||| ||||||||| | ||| | || ||||| | ||||||| |||||||||| ||| ||||||| ||||| |
|
|
| T |
34455889 |
aactcaaacaattgtcaaaaattaatcccaatatataattttcatgttcct-tttgcacatcatttcattcacaatattttcagtctatttcttatgttt |
34455987 |
T |
|
| Q |
536 |
tgcgcctttaattaatctttcagcaagcaac-ttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
|| |||| || |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
34455988 |
tgtgcctatatttaatctttcagcaagcaactttttaccaattcataattaaaagtcaaatatgaacaattttcacaaaacagtgttcatca |
34456079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 17266760 - 17266675
Alignment:
| Q |
297 |
tttcttgtggtgatcttcat-tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
17266760 |
tttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
17266675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 15019324 - 15019260
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
15019324 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
15019260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 39488191 - 39488127
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
39488191 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
39488127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 9167295 - 9167339
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
9167295 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
9167339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 15017684 - 15017640
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
15017684 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
15017640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 34098832 - 34098873
Alignment:
| Q |
320 |
atagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
34098832 |
atagacttatcactttattggattagaaagtgtggcgtccct |
34098873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065 (Bit Score: 496; Significance: 0; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Complemental strand, 34134 - 33516
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
34134 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttactccagccttaggaaataatg |
34035 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattga |
206 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| |
|
|
| T |
34034 |
atggattaatttggctgaaggaatcctaagagttatttgcattttttctttgtaattcagcaagtgtccctcctatctatatataggacacaaaaattga |
33935 |
T |
|
| Q |
207 |
ataaaagacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtgg |
306 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
33934 |
ataaaaaggaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggacattgtattgatcatatcaagaatcctttcttgtgg |
33835 |
T |
|
| Q |
307 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaa |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
33834 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactcttcattccatttcttgtttgaaaccacaaatcagcctaa |
33735 |
T |
|
| Q |
407 |
acaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcatta |
506 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
33734 |
acaccaattcaaaaccaaattctca-ttttcaactcaaatcattgtcaaaaataatcccaatgcataattttcgtttccttttggcacaccctttcatta |
33636 |
T |
|
| Q |
507 |
acaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattt |
606 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
33635 |
acaataattttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattt |
33536 |
T |
|
| Q |
607 |
tcacaaaatagtgttcatca |
626 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
33535 |
tcacaaaatagtgttcatca |
33516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 470; Significance: 0; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 8 - 626
Target Start/End: Complemental strand, 22821651 - 22821033
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
22821651 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttgttgtattcatgttaatttacttcaaccataggaaataatg |
22821552 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataagacacgaaaattga |
206 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
22821551 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttttaattcggcaagtgtccctcctacctatatataggacacggaaattga |
22821452 |
T |
|
| Q |
207 |
ataaaa--gacaagttaatttttgttnnnnnnnngtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgt |
304 |
Q |
| |
|
|||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22821451 |
ataaaaagggcaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgg |
22821354 |
T |
|
| Q |
305 |
ggtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcct |
404 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22821353 |
ggtgaacttcattccatagacttatcattttctaagattagaaagtgtggcgttcctaaactctccattccatttcttgtttgaaaccacaaatcagcct |
22821254 |
T |
|
| Q |
405 |
aaacaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcat |
504 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
22821253 |
aaacaccaattcaaaaccaaattctca-ttttcaactcaattcattgccaaaattaatcccaatacataattttcgtttccttttggcacaccctttcat |
22821155 |
T |
|
| Q |
505 |
taacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaat |
604 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
22821154 |
taacaatatttttagttcatttcttgtgttttgtacctttaattaatctttcagcaagcaacttttatcaattcataattataagtcaaatatgaacaat |
22821055 |
T |
|
| Q |
605 |
tttcacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
22821054 |
tttcacaaaatagtgtttatca |
22821033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 11126533 - 11126413
Alignment:
| Q |
240 |
tgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttc-attccatagacttatcattttcta |
338 |
Q |
| |
|
|||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||| || || ||||||||||| || ||||| |
|
|
| T |
11126533 |
tgagcaattgctcttt-ggttcttgattggaccaatt-ttgatcatatcaagaatcctttcttgtggtgatcctcaatcccatagacttaccactttctt |
11126436 |
T |
|
| Q |
339 |
ggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
11126435 |
ggattagaaagtgtggcatccct |
11126413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 244482 - 244418
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
244482 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
244418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 297 - 361
Target Start/End: Original strand, 29951844 - 29951909
Alignment:
| Q |
297 |
tttcttgtggtgatcttcat-tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
29951844 |
tttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct |
29951909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 29950227 - 29950271
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
29950227 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
29950271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 4568361 - 4568405
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
4568361 |
tccatagacttatcacttttttggattagaaagtgtggcgtccct |
4568405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 374; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 239 - 627
Target Start/End: Complemental strand, 21299520 - 21299131
Alignment:
| Q |
239 |
gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttcta |
338 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299520 |
gtgagtaattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttcta |
21299421 |
T |
|
| Q |
339 |
ggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcat-ttttc |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21299420 |
ggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcattttttc |
21299321 |
T |
|
| Q |
438 |
aactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttg |
537 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299320 |
aactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttg |
21299221 |
T |
|
| Q |
538 |
cgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatcat |
627 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299220 |
tgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatcat |
21299131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 247 - 379
Target Start/End: Original strand, 12639454 - 12639586
Alignment:
| Q |
247 |
ttgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggattaga |
346 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12639454 |
ttgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattctatagacttatcattttctaggattaga |
12639553 |
T |
|
| Q |
347 |
aagtgtggcgtccctaaactctccattccattt |
379 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
12639554 |
aagtgtggcgtccctaaactctccattccattt |
12639586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 397 - 613
Target Start/End: Original strand, 9344212 - 9344424
Alignment:
| Q |
397 |
atcagcctaaacaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacac |
496 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
9344212 |
atcagccaaaacaccaattcaaaaccaaattctcgtttt-caactcaaatcatcgtcaaaatcaatcctaatacataattttcgtttctt-ttggcacat |
9344309 |
T |
|
| Q |
497 |
cctttcattaacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaata |
596 |
Q |
| |
|
| || |||||| |||||| || || ||||| || ||||||| |||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9344310 |
catt-cattaa-aatattatttgtccatttattttgttttgtgcctataattaatatttcagcaagcaacttttatcaattcataattaaaagtcaaata |
9344407 |
T |
|
| Q |
597 |
tgaacaattttcacaaa |
613 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
9344408 |
tgaacaattttcacaaa |
9344424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 12639312 - 12639436
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcattttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
12639312 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaactatttcttgtatttatgttaatttacttcagccataggaaataatg |
12639411 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatc |
132 |
Q |
| |
|
|||||||||||||||||||| |||| |
|
|
| T |
12639412 |
atagattaatttggctgaagaaatc |
12639436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 18781863 - 18781927
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
18781863 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
18781927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 20419680 - 20419616
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
20419680 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
20419616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 18553447 - 18553491
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
18553447 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
18553491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 20417594 - 20417550
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20417594 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20417550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 30518326 - 30518282
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
30518326 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
30518282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 20414947 - 20414903
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
20414947 |
tccatagacttatcactttcttagattagaaagtgtggcgtccct |
20414903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0359 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: scaffold0359
Description:
Target: scaffold0359; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 239 - 626
Target Start/End: Complemental strand, 8890 - 8503
Alignment:
| Q |
239 |
gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttcta |
338 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8890 |
gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttcta |
8791 |
T |
|
| Q |
339 |
ggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcatttttca |
438 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8790 |
ggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacatatcagcctaaacaccaattcaaaaccaaattctcatttttca |
8691 |
T |
|
| Q |
439 |
actcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgc |
538 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8690 |
actcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgt |
8591 |
T |
|
| Q |
539 |
gcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8590 |
gcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacgaaatagtgttcatca |
8503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 239 - 626
Target Start/End: Original strand, 288915 - 289301
Alignment:
| Q |
239 |
gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttcta |
338 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
288915 |
gtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttcta |
289014 |
T |
|
| Q |
339 |
ggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcatttttca |
438 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
289015 |
ggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctca-ttttca |
289113 |
T |
|
| Q |
439 |
actcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgc |
538 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
289114 |
actcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattaacaatatttttagttcatttcttgtgttttga |
289213 |
T |
|
| Q |
539 |
gcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
289214 |
gcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
289301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 363; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 245 - 626
Target Start/End: Original strand, 44794703 - 44795085
Alignment:
| Q |
245 |
aattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggatta |
344 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44794703 |
aattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggatta |
44794802 |
T |
|
| Q |
345 |
gaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcatttt-tcaactca |
443 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
44794803 |
gaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccatagatcagcctaaacaccaattcaaaaccaaattctcattttttcaactca |
44794902 |
T |
|
| Q |
444 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgcgcctt |
543 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
44794903 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctt |
44795002 |
T |
|
| Q |
544 |
taattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44795003 |
taattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
44795085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 378 - 626
Target Start/End: Complemental strand, 21465252 - 21465005
Alignment:
| Q |
378 |
ttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattt |
477 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21465252 |
ttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaatcaaattctcatttt-caactcaaatcattgtcaaaattaatcccaatacataattt |
21465154 |
T |
|
| Q |
478 |
tcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaatt |
577 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21465153 |
tcgtttctttttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaatt |
21465054 |
T |
|
| Q |
578 |
catgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21465053 |
cataattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
21465005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 402 - 626
Target Start/End: Complemental strand, 44794716 - 44794490
Alignment:
| Q |
402 |
cctaaacaccaattcaaaaccaaattctcattttt--caactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccct |
499 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44794716 |
cctaaagagcaattcaaaaccaaattctcatttttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccct |
44794617 |
T |
|
| Q |
500 |
ttcattaacaatatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatga |
599 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44794616 |
ttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatga |
44794517 |
T |
|
| Q |
600 |
acaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
44794516 |
acaattttcacaaaatagtgttcatca |
44794490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 6050264 - 6050200
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
6050264 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
6050200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 15409909 - 15409973
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
15409909 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
15409973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 252; Significance: 1e-139; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 347 - 626
Target Start/End: Original strand, 127083 - 127365
Alignment:
| Q |
347 |
aagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaa--ccaaattctcatttttcaactc-a |
443 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
127083 |
aagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaaaccaaattctcatttttcaactcca |
127182 |
T |
|
| Q |
444 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgcgcctt |
543 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
127183 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcttt |
127282 |
T |
|
| Q |
544 |
taattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
626 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
127283 |
taattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgttcatca |
127365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 54881 - 54945
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
54881 |
tccatagacttatcactttcttggattagaaagtgtggcgtccctata-tatccattccatttctt |
54945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 914 - 850
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
914 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0146
Description:
Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 6725 - 6789
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
6725 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
6789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 22656 - 22592
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
22656 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
22592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 33327 - 33371
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
33327 |
tccatagacttatcaatttcttggattagaaagtgtggcgtccct |
33371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 136867 - 136911
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
136867 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
136911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 25802 - 25738
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt |
382 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
25802 |
tccatatacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt |
25738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 4635 - 4591
Alignment:
| Q |
317 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
361 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
4635 |
tccatagacttatcactttcttggattagaaagtgtggcatccct |
4591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University