View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18028_high_3 (Length: 458)

Name: NF18028_high_3
Description: NF18028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18028_high_3
NF18028_high_3
[»] chr5 (44 HSPs)
chr5 (227-446)||(15517485-15517715)
chr5 (2-95)||(19752912-19753006)
chr5 (2-95)||(19754136-19754232)
chr5 (2-95)||(25523069-25523164)
chr5 (2-95)||(28538676-28538771)
chr5 (2-95)||(5777901-5777994)
chr5 (2-95)||(18486908-18487003)
chr5 (2-97)||(22940629-22940725)
chr5 (1-96)||(25056386-25056483)
chr5 (4-95)||(36486496-36486589)
chr5 (5-95)||(40255681-40255773)
chr5 (2-95)||(5778842-5778937)
chr5 (2-92)||(20216769-20216861)
chr5 (4-92)||(28539828-28539917)
chr5 (2-78)||(7311609-7311685)
chr5 (2-95)||(16650861-16650956)
chr5 (2-95)||(33160292-33160387)
chr5 (15-97)||(20214194-20214277)
chr5 (7-82)||(33158113-33158188)
chr5 (5-92)||(24332916-24333005)
chr5 (20-97)||(1796052-1796131)
chr5 (3-99)||(5962579-5962675)
chr5 (5-93)||(36485302-36485392)
chr5 (2-92)||(42195137-42195227)
chr5 (234-288)||(15521511-15521565)
chr5 (10-95)||(25524141-25524229)
chr5 (2-95)||(25055412-25055507)
chr5 (380-433)||(15545539-15545593)
chr5 (2-82)||(1797303-1797383)
chr5 (21-92)||(2685749-2685820)
chr5 (395-438)||(15521978-15522021)
chr5 (3-82)||(18154509-18154586)
chr5 (19-95)||(18485138-18485216)
chr5 (5-95)||(21835041-21835132)
chr5 (1-92)||(2686406-2686501)
chr5 (22-95)||(5730441-5730517)
chr5 (5-78)||(5730871-5730944)
chr5 (23-76)||(34893686-34893739)
chr5 (2-82)||(2186785-2186865)
chr5 (2-56)||(25524104-25524158)
chr5 (2-105)||(42196206-42196311)
chr5 (4-87)||(1015492-1015577)
chr5 (4-82)||(38834102-38834179)
chr5 (133-181)||(26747178-26747227)
[»] chr1 (51 HSPs)
chr1 (120-226)||(46162887-46162991)
chr1 (1-95)||(52274968-52275064)
chr1 (2-95)||(24422800-24422895)
chr1 (2-97)||(39699773-39699869)
chr1 (2-97)||(41364827-41364923)
chr1 (5-95)||(11437208-11437300)
chr1 (1-99)||(36613909-36614009)
chr1 (5-95)||(11436042-11436134)
chr1 (2-92)||(24426081-24426173)
chr1 (2-96)||(51684365-51684461)
chr1 (2-92)||(45149976-45150068)
chr1 (2-95)||(23980472-23980567)
chr1 (2-82)||(43058800-43058880)
chr1 (2-95)||(51685771-51685866)
chr1 (5-97)||(45148579-45148672)
chr1 (20-95)||(14999285-14999361)
chr1 (2-95)||(33088623-33088718)
chr1 (2-95)||(35067008-35067103)
chr1 (6-97)||(39222483-39222577)
chr1 (2-95)||(52827347-52827442)
chr1 (5-95)||(45157218-45157309)
chr1 (2-97)||(46066523-46066617)
chr1 (5-92)||(39153125-39153214)
chr1 (2-92)||(37526884-37526975)
chr1 (2-92)||(52828076-52828168)
chr1 (2-95)||(44404442-44404537)
chr1 (5-92)||(50680335-50680423)
chr1 (3-95)||(43060013-43060107)
chr1 (1-95)||(39698563-39698658)
chr1 (2-92)||(52276169-52276261)
chr1 (20-95)||(7674528-7674603)
chr1 (5-92)||(7983053-7983141)
chr1 (2-95)||(35594217-35594310)
chr1 (2-95)||(41366137-41366231)
chr1 (2-100)||(25652710-25652809)
chr1 (4-95)||(36612853-36612945)
chr1 (3-92)||(43378720-43378810)
chr1 (1-93)||(31194057-31194149)
chr1 (19-100)||(50681627-50681710)
chr1 (2-73)||(7675465-7675536)
chr1 (44-97)||(7987905-7987958)
chr1 (20-82)||(39151945-39152008)
chr1 (2-95)||(35595198-35595294)
chr1 (5-95)||(11190385-11190477)
chr1 (2-95)||(12389988-12390082)
chr1 (24-95)||(14999983-15000056)
chr1 (21-105)||(16290083-16290170)
chr1 (2-75)||(33088089-33088162)
chr1 (51-95)||(39221358-39221405)
chr1 (25-78)||(48441084-48441137)
chr1 (1-69)||(40384753-40384821)
[»] chr7 (36 HSPs)
chr7 (3-97)||(18371422-18371518)
chr7 (2-97)||(31659620-31659718)
chr7 (2-104)||(17782559-17782663)
chr7 (2-95)||(21505416-21505509)
chr7 (1-95)||(22630457-22630553)
chr7 (2-78)||(18372463-18372539)
chr7 (2-92)||(42886292-42886384)
chr7 (2-90)||(14999161-14999249)
chr7 (2-95)||(3227600-3227695)
chr7 (2-95)||(7501858-7501953)
chr7 (2-95)||(31949322-31949417)
chr7 (2-95)||(31949808-31949903)
chr7 (2-82)||(47369796-47369876)
chr7 (2-95)||(127337-127430)
chr7 (2-95)||(7500455-7500549)
chr7 (2-95)||(22629483-22629581)
chr7 (2-97)||(47525373-47525470)
chr7 (2-93)||(17781663-17781756)
chr7 (2-94)||(3227109-3227202)
chr7 (2-95)||(11658379-11658474)
chr7 (2-97)||(48934909-48935006)
chr7 (2-92)||(128607-128699)
chr7 (2-92)||(11662557-11662649)
chr7 (25-95)||(20163585-20163657)
chr7 (23-95)||(34174010-34174083)
chr7 (23-88)||(47524532-47524599)
chr7 (5-95)||(34352795-34352887)
chr7 (1-95)||(34351497-34351588)
chr7 (20-95)||(597308-597381)
chr7 (1-92)||(6618212-6618303)
chr7 (45-95)||(21508453-21508503)
chr7 (5-95)||(31661018-31661110)
chr7 (18-95)||(43899448-43899525)
chr7 (44-95)||(14998008-14998062)
chr7 (13-95)||(769413-769497)
chr7 (5-105)||(48933658-48933759)
[»] chr3 (54 HSPs)
chr3 (5-102)||(29931219-29931318)
chr3 (5-102)||(29980373-29980472)
chr3 (1-94)||(8456479-8456573)
chr3 (2-95)||(12700175-12700268)
chr3 (1-92)||(7267647-7267739)
chr3 (2-95)||(54540796-54540891)
chr3 (1-103)||(47614177-47614281)
chr3 (2-95)||(12703506-12703600)
chr3 (4-95)||(29932707-29932799)
chr3 (4-95)||(29981861-29981953)
chr3 (5-95)||(7758402-7758494)
chr3 (2-95)||(22776818-22776913)
chr3 (3-95)||(54539755-54539849)
chr3 (1-95)||(534499-534595)
chr3 (4-92)||(7268835-7268924)
chr3 (2-92)||(47610586-47610678)
chr3 (2-99)||(51469968-51470067)
chr3 (3-91)||(24516464-24516554)
chr3 (2-97)||(52840610-52840707)
chr3 (11-97)||(53901403-53901489)
chr3 (5-95)||(19984849-19984941)
chr3 (5-95)||(11671350-11671441)
chr3 (2-97)||(535788-535885)
chr3 (3-92)||(34019152-34019241)
chr3 (15-95)||(55192014-55192095)
chr3 (2-95)||(47609697-47609792)
chr3 (2-97)||(51037534-51037630)
chr3 (2-95)||(5029689-5029783)
chr3 (3-92)||(40426785-40426877)
chr3 (3-97)||(49216245-49216341)
chr3 (2-95)||(8875906-8876001)
chr3 (2-95)||(46721226-46721321)
chr3 (5-92)||(52104484-52104569)
chr3 (44-95)||(47615596-47615649)
chr3 (2-96)||(46719940-46720036)
chr3 (3-95)||(51470462-51470555)
chr3 (3-92)||(54987014-54987103)
chr3 (22-95)||(5001200-5001275)
chr3 (5-95)||(19986079-19986173)
chr3 (2-70)||(31645000-31645068)
chr3 (2-95)||(28262193-28262287)
chr3 (9-104)||(51038803-51038900)
chr3 (2-105)||(18442620-18442726)
chr3 (2-97)||(18456069-18456167)
chr3 (2-105)||(19487694-19487800)
chr3 (14-95)||(53614819-53614902)
chr3 (5-97)||(23770416-23770510)
chr3 (44-88)||(22775783-22775828)
chr3 (21-73)||(6170296-6170348)
chr3 (21-73)||(6249633-6249685)
chr3 (2-95)||(28263117-28263212)
chr3 (2-95)||(52276304-52276399)
chr3 (2-95)||(52281553-52281648)
chr3 (2-95)||(52839037-52839132)
[»] chr2 (43 HSPs)
chr2 (2-95)||(22848191-22848286)
chr2 (2-95)||(38840499-38840594)
chr2 (3-94)||(13030293-13030383)
chr2 (2-95)||(7899888-7899983)
chr2 (4-95)||(36449778-36449871)
chr2 (2-95)||(18904367-18904462)
chr2 (2-95)||(23869541-23869635)
chr2 (2-95)||(38839242-38839337)
chr2 (3-95)||(18905995-18906088)
chr2 (2-95)||(11258817-11258912)
chr2 (2-97)||(18299371-18299468)
chr2 (2-97)||(41878090-41878189)
chr2 (2-95)||(22587960-22588054)
chr2 (15-94)||(18300743-18300822)
chr2 (2-95)||(18797246-18797342)
chr2 (20-95)||(18868924-18869001)
chr2 (3-92)||(36450928-36451018)
chr2 (2-92)||(7898694-7898786)
chr2 (2-95)||(1034475-1034570)
chr2 (14-82)||(32739638-32739706)
chr2 (20-92)||(13567975-13568049)
chr2 (6-95)||(802601-802691)
chr2 (44-101)||(21837064-21837121)
chr2 (15-100)||(24476863-24476948)
chr2 (3-104)||(11938796-11938898)
chr2 (2-82)||(28617937-28618016)
chr2 (44-95)||(21837303-21837354)
chr2 (1-76)||(22587522-22587596)
chr2 (3-95)||(41879219-41879313)
chr2 (20-95)||(16446154-16446231)
chr2 (3-77)||(24475244-24475318)
chr2 (2-95)||(11257622-11257716)
chr2 (2-94)||(26545527-26545621)
chr2 (4-95)||(13570565-13570658)
chr2 (2-94)||(1033212-1033304)
chr2 (6-69)||(810791-810854)
chr2 (2-92)||(8535662-8535752)
chr2 (2-74)||(18869169-18869242)
chr2 (3-92)||(26544152-26544242)
chr2 (4-56)||(32739693-32739744)
chr2 (25-78)||(5362194-5362247)
chr2 (24-95)||(5819741-5819813)
chr2 (1-92)||(8534586-8534677)
[»] chr8 (53 HSPs)
chr8 (2-98)||(10006341-10006439)
chr8 (2-95)||(5513982-5514076)
chr8 (2-95)||(12353367-12353460)
chr8 (2-90)||(1824084-1824174)
chr8 (2-90)||(1858529-1858619)
chr8 (2-94)||(18979126-18979220)
chr8 (2-92)||(29968343-29968434)
chr8 (1-95)||(32207330-32207424)
chr8 (2-95)||(8388464-8388557)
chr8 (2-100)||(10007769-10007869)
chr8 (2-95)||(22221370-22221465)
chr8 (2-95)||(22227712-22227807)
chr8 (2-97)||(22220386-22220483)
chr8 (1-95)||(12351921-12352017)
chr8 (2-86)||(18978029-18978114)
chr8 (9-97)||(11287774-11287864)
chr8 (5-92)||(40471156-40471244)
chr8 (3-95)||(24122883-24122976)
chr8 (2-95)||(1823552-1823647)
chr8 (2-95)||(1857997-1858092)
chr8 (2-78)||(24488686-24488761)
chr8 (5-92)||(11282011-11282100)
chr8 (5-86)||(18970920-18971002)
chr8 (2-95)||(24123904-24123996)
chr8 (3-95)||(2379931-2380021)
chr8 (2-95)||(30335639-30335734)
chr8 (2-95)||(30336507-30336602)
chr8 (1-95)||(24359809-24359903)
chr8 (5-92)||(8389698-8389787)
chr8 (2-93)||(43661267-43661360)
chr8 (39-97)||(24483141-24483201)
chr8 (20-95)||(5514294-5514370)
chr8 (2-95)||(5003104-5003197)
chr8 (2-97)||(38974793-38974890)
chr8 (2-97)||(39005891-39005988)
chr8 (17-95)||(45114537-45114617)
chr8 (31-95)||(23170034-23170098)
chr8 (2-95)||(38980050-38980145)
chr8 (2-95)||(39011147-39011242)
chr8 (6-95)||(43661833-43661924)
chr8 (44-95)||(11456638-11456691)
chr8 (2-95)||(30568887-30568981)
chr8 (2-97)||(32973942-32974039)
chr8 (8-65)||(18488274-18488331)
chr8 (46-96)||(36249551-36249603)
chr8 (2-95)||(11283215-11283310)
chr8 (50-95)||(11288914-11288961)
chr8 (2-95)||(32968456-32968551)
chr8 (2-95)||(42982663-42982758)
chr8 (44-97)||(3819487-3819541)
chr8 (2-93)||(29043400-29043493)
chr8 (2-91)||(45112875-45112964)
chr8 (2-38)||(30570262-30570298)
[»] chr4 (49 HSPs)
chr4 (2-92)||(8155741-8155832)
chr4 (2-101)||(17388217-17388317)
chr4 (2-93)||(19750581-19750673)
chr4 (2-93)||(19789133-19789225)
chr4 (2-98)||(10471394-10471492)
chr4 (9-95)||(17382993-17383080)
chr4 (2-95)||(26421628-26421722)
chr4 (6-95)||(49308038-49308127)
chr4 (5-95)||(1290207-1290299)
chr4 (2-92)||(12129626-12129718)
chr4 (2-95)||(1835108-1835203)
chr4 (3-92)||(8758844-8758935)
chr4 (2-95)||(25685828-25685923)
chr4 (2-95)||(31599789-31599884)
chr4 (2-95)||(5526132-5526226)
chr4 (2-97)||(31600991-31601088)
chr4 (2-101)||(52491613-52491714)
chr4 (2-95)||(1963196-1963291)
chr4 (2-95)||(8757675-8757769)
chr4 (2-95)||(13386538-13386634)
chr4 (2-92)||(35934347-35934437)
chr4 (1-92)||(35935538-35935631)
chr4 (2-96)||(25684933-25685029)
chr4 (2-95)||(48780248-48780343)
chr4 (2-97)||(1834117-1834215)
chr4 (2-95)||(5525360-5525454)
chr4 (2-95)||(10470546-10470641)
chr4 (1-97)||(33310094-33310189)
chr4 (1-95)||(13386014-13386112)
chr4 (2-95)||(10447006-10447102)
chr4 (2-95)||(13509365-13509459)
chr4 (2-95)||(48781052-48781146)
chr4 (20-95)||(49306775-49306851)
chr4 (2-95)||(10448266-10448361)
chr4 (9-97)||(1964454-1964544)
chr4 (3-82)||(37728572-37728651)
chr4 (2-95)||(21177997-21178091)
chr4 (3-65)||(21539078-21539140)
chr4 (2-95)||(3928864-3928959)
chr4 (45-95)||(14868890-14868941)
chr4 (45-95)||(14876993-14877044)
chr4 (2-92)||(27257966-27258057)
chr4 (14-92)||(55603549-55603628)
chr4 (21-92)||(55602379-55602451)
chr4 (2-97)||(50909678-50909776)
chr4 (4-82)||(50909287-50909365)
chr4 (4-73)||(46638733-46638802)
chr4 (136-189)||(49309718-49309771)
chr4 (2-95)||(3927666-3927761)
[»] chr6 (31 HSPs)
chr6 (5-97)||(16703568-16703659)
chr6 (2-97)||(1829609-1829706)
chr6 (2-95)||(7316300-7316395)
chr6 (2-95)||(8659265-8659360)
chr6 (2-103)||(8822799-8822902)
chr6 (3-95)||(8821873-8821967)
chr6 (5-92)||(26575063-26575150)
chr6 (2-97)||(7314878-7314974)
chr6 (4-95)||(14822360-14822453)
chr6 (1-95)||(16704502-16704598)
chr6 (4-95)||(14823583-14823677)
chr6 (3-95)||(8660211-8660304)
chr6 (2-100)||(27322074-27322173)
chr6 (3-95)||(27437828-27437922)
chr6 (5-95)||(6840194-6840284)
chr6 (2-95)||(10784592-10784688)
chr6 (2-95)||(3721612-3721707)
chr6 (2-103)||(30495703-30495805)
chr6 (22-95)||(27318315-27318389)
chr6 (21-95)||(6842308-6842384)
chr6 (2-92)||(34834585-34834677)
chr6 (22-95)||(3722533-3722608)
chr6 (2-78)||(10785919-10785995)
chr6 (5-79)||(17496815-17496890)
chr6 (2-95)||(3333032-3333127)
chr6 (2-78)||(34830921-34830997)
chr6 (2-84)||(30494569-30494651)
chr6 (2-74)||(26574642-26574713)
chr6 (2-72)||(12350823-12350892)
chr6 (1-96)||(3333148-3333244)
chr6 (44-93)||(26717132-26717183)
[»] scaffold0093 (2 HSPs)
scaffold0093 (3-99)||(2472-2569)
scaffold0093 (3-99)||(7095-7192)
[»] scaffold0294 (2 HSPs)
scaffold0294 (2-95)||(5444-5539)
scaffold0294 (2-95)||(4442-4537)
[»] scaffold0632 (1 HSPs)
scaffold0632 (2-95)||(3314-3408)
[»] scaffold0112 (1 HSPs)
scaffold0112 (2-99)||(37144-37242)
[»] scaffold0302 (2 HSPs)
scaffold0302 (9-95)||(17470-17558)
scaffold0302 (2-96)||(18782-18878)
[»] scaffold0186 (2 HSPs)
scaffold0186 (2-103)||(23073-23174)
scaffold0186 (37-95)||(23931-23991)
[»] scaffold0019 (2 HSPs)
scaffold0019 (2-94)||(61465-61559)
scaffold0019 (2-97)||(60088-60185)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-95)||(49440-49534)
[»] scaffold2034 (2 HSPs)
scaffold2034 (2-96)||(232-328)
scaffold2034 (2-73)||(984-1055)
[»] scaffold0320 (1 HSPs)
scaffold0320 (5-95)||(19488-19580)
[»] scaffold0059 (2 HSPs)
scaffold0059 (2-94)||(4736-4829)
scaffold0059 (2-82)||(3690-3770)
[»] scaffold1303 (1 HSPs)
scaffold1303 (2-95)||(1439-1534)
[»] scaffold0586 (2 HSPs)
scaffold0586 (1-92)||(6346-6439)
scaffold0586 (2-95)||(9033-9126)
[»] scaffold0369 (1 HSPs)
scaffold0369 (5-95)||(13193-13283)
[»] scaffold0227 (1 HSPs)
scaffold0227 (2-97)||(125-222)
[»] scaffold0049 (2 HSPs)
scaffold0049 (2-95)||(7421-7516)
scaffold0049 (1-96)||(7537-7633)
[»] scaffold0045 (2 HSPs)
scaffold0045 (21-97)||(49109-49187)
scaffold0045 (5-72)||(48334-48399)


Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 227 - 446
Target Start/End: Original strand, 15517485 - 15517715
Alignment:
Q  227 aaatttgattaggcgacaatgacaatatgtacgtggagcatatgtatagaacatataaccagtacgttatgaatagtcaaacacggtttatcaaccttgt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15517485 aaatttgattaggcgacaatgacaatatgtacgtggagcatatgtatagaagatataaccagtacgttatgaatagtcaaacacggtttatcaaccttgt 15517584  T
Q  327 cttattatataaaactttagaataatcaattctacgttcaaact-----------aattgatgtaacatggataagaaatatgaagtatataaggataca 415  Q
    |||||| |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  15517585 cttattctataaaactttagaataatcaattctacgttcaaactatatgtttgacaattgatgtaacatggataagaaatatgaagtatataaggataca 15517684  T
Q  416 cgtacattcataaacataaacatatattgat 446  Q
    |||||||||||||||||||||||||||||||    
T  15517685 cgtacattcataaacataaacatatattgat 15517715  T

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Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 19753006 - 19752912
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19753006 ggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcc 19752912  T

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Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 19754136 - 19754232
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg---aaaagtgcactttagcc 95  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||| ||||||||||||    
T  19754136 ggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcc 19754232  T

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Target: chr5; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 25523164 - 25523069
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25523164 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 25523069  T

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Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 28538771 - 28538676
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||||  || |||||||||||||||||||    
T  28538771 ggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcc 28538676  T

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Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 5777994 - 5777901
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  5777994 ggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaagtgcactttagcc 5777901  T

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Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 18486908 - 18487003
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||| |||| | || ||| ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  18486908 ggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcc 18487003  T

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Target: chr5; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 22940629 - 22940725
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaa 97  Q
    |||||||| ||||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  22940629 ggctaaattttaggggtc-aaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccaa 22940725  T

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Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25056386 - 25056483
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcca 96  Q
    |||||||||||||||||| |||||||||||||||  || ||| |||| ||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  25056386 aggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcca 25056483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 36486496 - 36486589
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    |||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||  |||||||||||| ||||    
T  36486496 ctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 36486589  T

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Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 40255681 - 40255773
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||| |||   |||||||||||||||||||||    
T  40255681 taaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcc 40255773  T

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Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 5778842 - 5778937
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  5778842 ggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 5778937  T

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Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 20216769 - 20216861
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||| |||| |||||||||||||||||||||||||| || || || |||||||||||||||||||| |||  |||||||||||||||||||    
T  20216769 ggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

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Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 28539828 - 28539917
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcacttta 92  Q
    |||||||||||||| |||||||||||||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||| |||||||||    
T  28539828 ctaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaggggggaaaaatgcacttta 28539917  T

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Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 7311685 - 7311609
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    |||||||||||||||||| |||||||||||||||||| ||  | |||||| ||||||||||||||||||||||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggg 7311609  T

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Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 16650861 - 16650956
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||| |||||||||| ||||||||||||||| || ||| |||| ||||||||||||||||| |||||||  || |||||||||||||||||||    
T  16650861 ggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcc 16650956  T

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Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 33160292 - 33160387
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||| |||| |||||||||||||| | || ||| ||||| |||||||||||||||||||| |||  ||||||||||||||||||||||    
T  33160292 ggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcc 33160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 20214277 - 20214194
Alignment:
Q  15 ggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||||||||||  ||  | || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20214277 ggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagccaa 20214194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 33158188 - 33158113
Alignment:
Q  7 aatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    ||||||| |||| ||||||||||||||||||| ||| || | ||||||||||||||||||||||||||||||||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaa 33158113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 24333005 - 24332916
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||||| ||| |||||||||||||||||||  || |||||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  24333005 taaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 1796131 - 1796052
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||  |||||| ||||||||||||||    
T  1796131 caaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagccaa 1796052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 5962579 - 5962675
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaata 99  Q
    ||||||| ||||| ||| |||||| ||||||||||| ||| ||| |||||||| ||| ||||||||||| || || |||||||||||||||||||||    
T  5962579 gctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttgaaagtcagtggaaaaagtgcactttagccaata 5962675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 36485392 - 36485302
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttag 93  Q
    |||||||||||||||||||||| ||||||||||| ||| | || |||||||| |||||||| ||||||||||  |||||| ||||||||||    
T  36485392 taaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 42195227 - 42195137
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcacttta 92  Q
    |||||||||||||||| |||||||||||| |||||||  || ||||||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  42195227 ggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaacttttt-aaagttaagggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 15521511 - 15521565
Alignment:
Q  234 attaggcgacaatgacaatatgtacgtggagcatatgtatagaacatataaccag 288  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  15521511 attaggcgacaatgacaatatgtacgtggagcatatgtaaagaagatataaccag 15521565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 25524141 - 25524229
Alignment:
Q  10 cttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta---gggggaaaagtgcactttagcc 95  Q
    |||||| |||||||||||||||||||||| ||| |||||||||||| ||| ||||| ||| |||   ||||||||||||||||||||||    
T  25524141 cttaggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcc 25524229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 25055507 - 25055412
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||||||||||||| ||  || |||  ||||||||||||   || ||||||  |||||||||||||||||||||||    
T  25055507 ggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcc 25055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 433
Target Start/End: Original strand, 15545539 - 15545593
Alignment:
Q  380 aacatggataagaaatatgaagtatat-aaggatacacgtacattcataaacata 433  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  15545539 aacatggataagaaatatgaagtatataaaggatacaggtacattcataaacata 15545593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 1797303 - 1797383
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    |||||||||||| ||| ||||||||||||||||||| | || || ||||||||||||||||||| ||| |||  |||||||    
T  1797303 ggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaaagggaaaa 1797383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 2685820 - 2685749
Alignment:
Q  21 aaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    |||||||||||||||||| ||| ||| ||||||||  |||||||||||| |||||||||| |||||| ||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaattagggggaatagtgcatttta 2685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 438
Target Start/End: Original strand, 15521978 - 15522021
Alignment:
Q  395 tatgaagtatataaggatacacgtacattcataaacataaacat 438  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  15521978 tatgaagtatataaggatacacctacattcataaacataaacat 15522021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 18154586 - 18154509
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    ||||||| |||| |||| |||||||||||||||||| ||| |||| |||||||| |||||||||||||||| ||||||||    
T  18154586 gctaaattttagagggc-aaaattgtagtttttgtactta-ggggtcaaaattgtaagtttttgaaagttaaggggaaaa 18154509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 18485216 - 18485138
Alignment:
Q  19 ccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||| |||||  || ||| |||||||||||||||||||||| ||||||  ||||| |||||||||||||||||    
T  18485216 ccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcc 18485138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 21835132 - 21835041
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    |||||||||||||| |||||||||||||||||||  || |||| ||||||  ||| ||||| ||| |||| |||| ||||||||||||||||    
T  21835132 taaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttagagggggaaagtgcactttagcc 21835041  T

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Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2686406 - 2686501
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag----ggggaaaagtgcacttta 92  Q
    |||||||||| |||||| |||||||| ||||||||||| ||| | |  ||||||||||||||||| ||||||||    |||| |||||||||||||    
T  2686406 aggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagttagaggagggggaaagtgcacttta 2686501  T

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Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 5730517 - 5730441
Alignment:
Q  22 aaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta---gggggaaaagtgcactttagcc 95  Q
    ||||||| ||||| ||| ||| |  |||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcc 5730441  T

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Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 5730871 - 5730944
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    |||||||||||||| | ||||||| ||||| ||| ||| ||||||||||||| ||||||||||| ||| |||||    
T  5730871 taaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagtttttgaaggttgggggg 5730944  T

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Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 34893739 - 34893686
Alignment:
Q  23 aattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg 76  Q
    ||||||||||||||||  || || ||||||||||||||||||||||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggg 34893686  T

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Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 2186865 - 2186785
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    ||||||||||||||||   ||||||||||||||||||  ||   | |||||||||||| ||||||||| ||||||||||||    
T  2186865 ggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaacttagggggaaaa 2186785  T

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Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 25524104 - 25524158
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattg 56  Q
    ||||||||||||||||| ||||||| ||||||||||| ||| | |||||||||||    
T  25524104 ggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 42196206 - 42196311
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaata 99  Q
    |||||||||||||||| | |||| |||||||||||||  ||  |||||||| |  ||| ||||| |||||||  ||||| |||||||||||||||| |||    
T  42196206 ggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcactttagcctata 42196305  T
Q  100 attttt 105  Q
     |||||    
T  42196306 tttttt 42196311  T

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Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 1015577 - 1015492
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgca 87  Q
    |||| ||||||||||  |||||||||| |||||||   | ||||||||||||| || ||||| ||||||||||  |||||||||||    
T  1015577 ctaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

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Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 38834179 - 38834102
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    ||||||||||||| || ||||||||||||||||||  ||  ||| |||||| |||| ||||| ||||||| ||||||||    
T  38834179 ctaaatcttagggagctaaaattgtagtttttgtacata-agggtcaaaatcgcaactttttaaaagttaaggggaaaa 38834102  T

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Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 26747227 - 26747178
Alignment:
Q  133 cacttttttatttaattcttaagtattaaa-tttgccacctaaagtggta 181  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||    
T  26747227 cacttttttatttaattttttagtattaaattttgccacctaaggtggta 26747178  T

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Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 46162887 - 46162991
Alignment:
Q  120 ggttttaagctgccacttttttatttaattcttaagtattaaatttgccacctaaagtggtacaagagtgtgtagccacgtaaggtgtggtttgtgtatc 219  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  46162887 ggttttaagctggcacttttttatttaattcttaaatattaaatttgccacctaaagtggtacaagagtgtgtagccacataag--gtggtttgtgtatc 46162984  T
Q  220 agaactc 226  Q
    |||||||    
T  46162985 agaactc 46162991  T

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Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 52275064 - 52274968
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  52275064 aggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcc 52274968  T

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Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 24422895 - 24422800
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||  |||| |||||||||||||||||    
T  24422895 ggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcc 24422800  T

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Target: chr1; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 39699773 - 39699869
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagccaa 97  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  39699773 ggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagttaggggggaaaagtgcactttagccaa 39699869  T

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Target: chr1; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 41364923 - 41364827
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg-gaaaagtgcactttagccaa 97  Q
    ||||||||||||||||| | ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41364923 ggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttagccaa 41364827  T

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Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 11437208 - 11437300
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  11437208 taaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 11437300  T

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Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36613909 - 36614009
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaat 98  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||  |||||| |||||||||||||||    
T  36613909 aggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagccaat 36614008  T
Q  99 a 99  Q
    |    
T  36614009 a 36614009  T

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Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 11436134 - 11436042
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||||| || |||   |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11436134 taaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcc 11436042  T

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Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 24426081 - 24426173
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcacttta 92  Q
    |||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  24426081 ggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

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Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 51684461 - 51684365
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcca 96  Q
    |||||||||||||||||||||||||||||||||| ||  || |||||||||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  51684461 ggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcca 51684365  T

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Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 45149976 - 45150068
Alignment:
Q  2 ggctaaatcttagggggc-caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcacttta 92  Q
    |||||||||||||||||  ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45149976 ggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcacttta 45150068  T

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Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 23980472 - 23980567
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||||||| | |||||||| ||||||||||| ||| || ||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  23980472 ggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagcc 23980567  T

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Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 43058880 - 43058800
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    ||||||||||||| |||| |||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||    
T  43058880 ggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagttagggggaaaa 43058800  T

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Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 51685771 - 51685866
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| |||||||||||||||||||  ||  |||||||||| |||| ||||||||||||  |||||||||||||||||||||||    
T  51685771 ggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcc 51685866  T

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Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 45148672 - 45148579
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaa 97  Q
    |||||||||||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  45148672 taaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagccaa 45148579  T

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Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 14999361 - 14999285
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaagtacactttagcc 14999285  T

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Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 33088623 - 33088718
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||| | ||||||||||||||||||| |||  ||| |||||||||||||||||||| |||  || ||||||||||||||||||||    
T  33088623 ggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcc 33088718  T

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Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 35067008 - 35067103
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||| |||||||||||||||||||||||||||   || ||||||||||| |||| ||||||||| |||  ||||||||||||||||||||||    
T  35067008 ggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcc 35067103  T

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Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 39222483 - 39222577
Alignment:
Q  6 aaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta---gggggaaaagtgcactttagccaa 97  Q
    ||||||||| |||| || |||||||||||| || ||| ||||||||||||||||||||||||||||||   |||| |||||||||||||||||||    
T  39222483 aaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagccaa 39222577  T

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Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 52827442 - 52827347
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||   ||||||| ||||| ||| ||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52827442 ggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 52827347  T

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Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 45157218 - 45157309
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||||||  ||| |||||||||||||||||||  || |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  45157218 taaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaagtgcactttagcc 45157309  T

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Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 46066617 - 46066523
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaa 97  Q
    |||||||||||||||| | ||||||||||||||||||  || ||||| ||||| |||| ||||||||||||||| |||||||||||||| ||||||    
T  46066617 ggctaaatcttagggg-ctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagttaggaggaaaagtgcacttaagccaa 46066523  T

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Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 39153125 - 39153214
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||||| ||| |||||||||||||||||||  || |||||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  39153125 taaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

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Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 37526884 - 37526975
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||||||||||| |||||||||| |||| | |||||| || |||||||||||||||||||||||||||  ||||||||||| |||||||    
T  37526884 ggctaaatcttagggg-ccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

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Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 52828076 - 52828168
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcacttta 92  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| || ||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  52828076 ggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T

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Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 44404537 - 44404442
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||| |||||||||||||||| ||||||||||| ||| ||||| |||||||| |||||||||||||||   ||| ||||||||| |||||||    
T  44404537 ggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcc 44404442  T

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Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 50680423 - 50680335
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    ||||||||||||| | |||||| |||||||| || ||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  50680423 taaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaagggggaaaaatgcacttta 50680335  T

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Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 43060013 - 43060107
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||| |||| ||||||||||||||||||| ||| |||| ||||||| ||| ||||||||||||  |||||| ||||| ||||||||||    
T  43060013 gctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcc 43060107  T

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Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 39698658 - 39698563
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||| || |||||||| |||||| |||| ||| ||||||||||||| |||||||| |||||||  ||||| ||||||||||||||||    
T  39698658 aggctaaatcttagtgg-ccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcc 39698563  T

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Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 52276169 - 52276261
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcacttta 92  Q
    |||||||||||||||| | ||| || ||||||||||| ||| |||||||||||| ||| ||||||||||||||  |||| |||||||||||||    
T  52276169 ggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcacttta 52276261  T

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Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 7674603 - 7674528
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  7674603 caaaattgtagtttttgtactta-gggcccaaaattgcaagtttttaaaagttaggggggaaaagggcactttagcc 7674528  T

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Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 7983141 - 7983053
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcacttta 92  Q
    |||||||||||||| ||||||||| |||||  ||  || ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  7983141 taaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagttacgggagaaaagtgcacttta 7983053  T

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Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 35594310 - 35594217
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    |||||||| ||||||| | ||||||||||||||  || ||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  35594310 ggctaaattttaggggtc-aaaattgtagttttaatactta-ggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 35594217  T

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Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 41366137 - 41366231
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||| ||| |||| |||||  || ||| ||||| ||||||||| |||||||||||||||  |||||||||||||||||||||    
T  41366137 ggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcc 41366231  T

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Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 25652809 - 25652710
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa-gtgcactttagccaataa 100  Q
    ||||||||||||| |||||||| || || |||||||| ||| |||  ||||||||||||||||||||| ||||  |||||| ||||||||||||| ||||    
T  25652809 ggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagtttttgaaaattagaaggaaaaggtgcactttagcctataa 25652710  T

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Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 36612945 - 36612853
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||  |||||||||||||||||| |||  |  |||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  36612945 ctaaatcttagggggttaaaattgtagtttttgtactta-agatccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcc 36612853  T

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Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 43378720 - 43378810
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    ||||||||||||| || |||||||||| |||||||| ||| |||  |||||||| ||||||||||||||| || | |||||||||||||||    
T  43378720 gctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagagagaaaagtgcacttta 43378810  T

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Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31194149 - 31194057
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttag 93  Q
    |||||||||||||  ||||||||||| |||||||||||  | |||||||||| | | || ||||| |||||||||| ||||||||| ||||||    
T  31194149 aggctaaatcttaaagggccaaaattttagtttttgtacatgtggggccaaattcgtaactttttaaaagttagggtgaaaagtgccctttag 31194057  T

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Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 50681627 - 50681710
Alignment:
Q  19 ccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaataa 100  Q
    |||| |||||||||||| || |||  | ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||    
T  50681627 ccaatattgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagccaataa 50681710  T

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Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 7675465 - 7675536
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta 73  Q
    ||||||||||||||||| ||||||| || ||||| || ||| | || |||||||||||||||||||||||||    
T  7675465 ggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagtta 7675536  T

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Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 7987905 - 7987958
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaa 97  Q
    ||||||||||||| || |||||||||||||||||||||| |||||||| |||||    
T  7987905 ggggccaaaattgtaaatttttgaaagttagggggaaaaatgcactttggccaa 7987958  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 39152008 - 39151945
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaa 82  Q
    |||||||||||||||||||  || |||||||||||| ||||||||||||| || ||||||||||    
T  39152008 caaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaa 39151945  T

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Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 35595198 - 35595294
Alignment:
Q  2 ggctaaatcttagggggccaaaattgt-agtttttgtatttatggggccaaaattgc-aagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| |||||||||| ||||||| ||  || |||| ||||||||| |||||||| ||||||||  |||||||||| ||||||||||    
T  35595198 ggctaaatcttagggg-ccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcc 35595294  T

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Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 11190477 - 11190385
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||| ||  |||||||| ||||||||||| || ||  |||||||||||| ||||| ||| |||  ||| ||||||||||||||||||    
T  11190477 taaatcttagaggatcaaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 11190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 12389988 - 12390082
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||| |||||||||||||| || ||||||||  || |||  |||||| |||| |||||||||||||  | ||||||| ||||||||||||    
T  12389988 ggctaaatct-agggggccaaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcc 12390082  T

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Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 14999983 - 15000056
Alignment:
Q  24 attgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg--gggaaaagtgcactttagcc 95  Q
    ||||||| ||||||| ||| |||  ||||||||||||||||| |||||||||  || ||||||| |||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcc 15000056  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 16290170 - 16290083
Alignment:
Q  21 aaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta---gggggaaaagtgcactttagccaataattttt 105  Q
    ||||||||||||||| ||  || ||| |||||||||||| |||||||| ||||   |||| |||| |||||||||||| |||| ||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcctataaatttt 16290083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 33088162 - 33088089
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg 75  Q
    |||||||||||| |||   ||||||||||||||| |||||| | |   |||||| |||||||||||||||||||    
T  33088162 ggctaaatcttaagggaataaaattgtagtttttatatttaggagataaaaattacaagtttttgaaagttagg 33088089  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 39221405 - 39221358
Alignment:
Q  51 aaattgcaagtttttgaaagtta---gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||   |||||||||||||| |||||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcc 39221358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 48441137 - 48441084
Alignment:
Q  25 ttgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    ||||||||||| |||||| |||| ||||||||||| ||||| ||| ||||||||    
T  48441137 ttgtagtttttttatttaaggggtcaaaattgcaattttttaaaacttaggggg 48441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40384821 - 40384753
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaa 69  Q
    ||||||||| |||||||  |||||||||||||||||||  || | | | |||||||||| |||||||||    
T  40384821 aggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaa 40384753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 18371518 - 18371422
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagccaa 97  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  18371518 gctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagccaa 18371422  T

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Target: chr7; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 31659718 - 31659620
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg---aaaagtgcactttagccaa 97  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||||   |||||||||||||||||||    
T  31659718 ggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagccaa 31659620  T

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Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 17782559 - 17782663
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaata 99  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||    
T  17782559 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctata 17782658  T
Q  100 atttt 104  Q
    |||||    
T  17782659 atttt 17782663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 21505509 - 21505416
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||||||| |||| |||||||||||||||||||| |  ||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  21505509 ggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagttagggggaaaagtgcactttagcc 21505416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22630457 - 22630553
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  22630457 aggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcc 22630553  T

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Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 18372463 - 18372539
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  18372463 ggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaattaggggg 18372539  T

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Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 42886292 - 42886384
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcacttta 92  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||  || |||||||||||||||    
T  42886292 ggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

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Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 14999161 - 14999249
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactt 90  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||| |||||||||||||||||    
T  14999161 ggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaag-ttttgaaaattaggggggaaaagtgcactt 14999249  T

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Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 3227600 - 3227695
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||  | ||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  3227600 ggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 3227695  T

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Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 7501858 - 7501953
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||| |||||| |||||||||||||| |||||  || ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  7501858 ggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7501953  T

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Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 31949417 - 31949322
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg--gggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  31949417 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 31949322  T

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Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 31949808 - 31949903
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||  | ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  31949808 ggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagcc 31949903  T

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Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 47369876 - 47369796
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    |||||||||||| |||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||    
T  47369876 ggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaa 47369796  T

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Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 127430 - 127337
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||| ||| |||| ||||| ||| ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  127430 ggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcc 127337  T

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Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 7500549 - 7500455
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||| |||| | || |||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  7500549 ggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcc 7500455  T

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Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 22629581 - 22629483
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-----agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||||||||| ||     |||||||||| ||||||||||||    
T  22629581 ggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagcc 22629483  T

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Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 47525373 - 47525470
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||| | ||||||| |||||  || ||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  47525373 ggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccaa 47525470  T

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Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 17781756 - 17781663
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttag 93  Q
    |||||||||||||||||   ||||||| ||||| ||| ||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  17781756 ggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

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Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 3227202 - 3227109
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagc 94  Q
    |||||||||||| |||| | ||||||| ||||| ||| ||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  3227202 ggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggggggaaagtgcactttagc 3227109  T

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Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 11658474 - 11658379
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||| ||||  ||| ||||||||||||||||||||  || ||||| ||||||||| ||||||||||||||  |||||||||||||| |||||||    
T  11658474 ggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcc 11658379  T

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Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 48934909 - 48935006
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaa 97  Q
    |||||| |||| ||||  ||||||| ||||||||||| |||  ||| ||||||| ||||||||||||||||||||  |||||| ||||||||||||||    
T  48934909 ggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagccaa 48935006  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 128607 - 128699
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||| |||||||||||| | ||||||| ||||| ||| ||| |||| ||||||||||| |||||||||||||  | |||||||||||||||||    
T  128607 ggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

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Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 11662557 - 11662649
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||| |||| ||||||||||||| |||||||||||  ||  | || ||||||||||||||||||||||||  ||||||||| |||||||||    
T  11662557 ggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 20163585 - 20163657
Alignment:
Q  25 ttgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||||||||||||  || || ||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcc 20163657  T

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Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 34174010 - 34174083
Alignment:
Q  23 aattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||| ||||| ||| ||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 34174083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  23 aattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcac 88  Q
    |||||| ||||| ||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

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Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 34352795 - 34352887
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||| ||||||||||| |||||| |||| ||| ||| ||||||| | |||||||||||| ||  ||| | |||||||||||||||||    
T  34352795 taaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcc 34352887  T

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Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34351588 - 34351497
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||||||| ||||  ||||||||||||| | || ||   | ||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  34351588 aggctaaatcttaaggggttaaaattgtagtttctatacttggagagccaaaattgcaagtttttgaaagtcagggggaa---tgcactttagcc 34351497  T

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Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 597308 - 597381
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||| ||||| | | |||||| ||||||||||||||||| |||||||| ||||| ||||||    
T  597308 caaaattgtagtttttgtacttatgcgtc-aaaatttcaagtttttgaaagtta-ggggaaaaatgcacattagcc 597381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 6618303 - 6618212
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    |||| ||||||||||| | |||||||||| ||||| |||||| ||   ||||||||||||||||  |||||||| || |||||| |||||||    
T  6618303 aggcaaaatcttagggagtcaaaattgtaatttttatatttaaggaatcaaaattgcaagttttgaaaagttagaggaaaaagtacacttta 6618212  T

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Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 21508453 - 21508503
Alignment:
Q  45 gggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||||||| || ||||||||||||| |||||||| ||||||||||||    
T  21508453 gggccaaaattgaaactttttgaaagttaaggggaaaaatgcactttagcc 21508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 31661018 - 31661110
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||| ||||||| | |||||| |||||||||||  ||  ||| ||||||||||| ||||||||||||  || ||| ||||||||||||||||    
T  31661018 taaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcc 31661110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 43899525 - 43899448
Alignment:
Q  18 gccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||||||| ||||| ||||||   |  ||||||||||||||||||||||||| ||| |||| || |||||||||    
T  43899525 gccaaaattgtaatttttatatttagaagatcaaaattgcaagtttttgaaagttaagggaaaaaatgtactttagcc 43899448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 14998062 - 14998008
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagttagggggaaaa---gtgcactttagcc 95  Q
    ||||||||||||| |||||||||||||||||||| ||||   |||||||||||||    
T  14998062 ggggccaaaattgtaagtttttgaaagttaggggaaaaaaaggtgcactttagcc 14998008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 769497 - 769413
Alignment:
Q  13 agggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||| ||||||||| || |||||||| ||| |  | ||||||||||||||||||||| ||  ||| |||||| ||||||||||||    
T  769497 agggagccaaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcactttagcc 769413  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 48933759 - 48933658
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcactttagccaataattt 103  Q
    ||||||||| |||  |||||||||||||||||| | || |||  ||||||||||||||||| ||| || |  ||||||||| || ||||||| |||| ||    
T  48933759 taaatcttaagggatcaaaattgtagtttttgtttataagggatcaaaattgcaagtttttaaaatttaaaagggaaaagtacattttagcctataaatt 48933660  T
Q  104 tt 105  Q
    ||    
T  48933659 tt 48933658  T

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Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 29931318 - 29931219
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaataatt 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  29931318 taaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctataatt 29931219  T

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Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 29980472 - 29980373
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaataatt 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  29980472 taaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctataatt 29980373  T

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Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8456573 - 8456479
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg-aaaagtgcactttagc 94  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  8456573 aggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaattagggggaaaaagtgcactttagc 8456479  T

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Target: chr3; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 12700268 - 12700175
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12700268 ggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaagtgcactttagcc 12700175  T

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Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7267739 - 7267647
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7267739 aggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcacttta 7267647  T

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Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 54540796 - 54540891
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  54540796 ggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 54540891  T

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Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 47614281 - 47614177
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaat 98  Q
    |||||||||||||||||||||||||||| |||||  || ||| |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  47614281 aggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagccaat 47614182  T
Q  99 aattt 103  Q
    |||||    
T  47614181 aattt 47614177  T

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Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 12703506 - 12703600
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||||||||| ||| |||||||||||||||||    
T  12703506 ggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagagggaaaaagtgcactttagcc 12703600  T

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Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 29932707 - 29932799
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29932707 ctaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 29932799  T

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Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 29981861 - 29981953
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29981861 ctaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 29981953  T

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Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 7758494 - 7758402
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||||  |||| |||||||||||||||||    
T  7758494 taaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 7758402  T

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Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 22776818 - 22776913
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    |||||| ||||||||||||||||||||||||||||||  || |||||||||||||||| ||| ||||||||||||  |||||||||||||||||||    
T  22776818 ggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcc 22776913  T

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Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 54539849 - 54539755
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||  || |||||||||||||||||||    
T  54539849 gctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcc 54539755  T

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Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 534595 - 534499
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||||||||||||  || | || ||||||||||||||||||| ||||  ||||| |||||||||||||||||    
T  534595 aggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcc 534499  T

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Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 7268835 - 7268924
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcacttta 92  Q
    |||||||||||| ||||||||||||||||| | || ||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  7268835 ctaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagttaggggggaaaagtgcacttta 7268924  T

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Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 47610586 - 47610678
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcacttta 92  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  47610586 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T

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Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 51470067 - 51469968
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg--gggaaaagtgcactttagccaata 99  Q
    |||||||||||||||||   ||||||| ||||| ||| ||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  51470067 ggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagccaata 51469968  T

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Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 24516554 - 24516464
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcacttt 91  Q
    ||||||||||| ||||||||||||||||||||| || ||| || ||||||||||||||||||| ||||||||||||  |||||||||||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

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Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 52840610 - 52840707
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||| ||||||||| |||||  || ||| || ||||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  52840610 ggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagccaa 52840707  T

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Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 53901403 - 53901489
Alignment:
Q  11 ttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaa 97  Q
    |||||||||||| ||||||||||||||| ||| || | ||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  53901403 ttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaacttagggggaaaagtgcactttagccaa 53901489  T

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Target: chr3; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 19984941 - 19984849
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||  ||| |||||||||||||||||||  || |||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  19984941 taaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

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Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 11671350 - 11671441
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg-gggaaaagtgcactttagcc 95  Q
    |||||| ||||||| ||||  |||||||||| |||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  11671350 taaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaagttaggcggaaaaagtgcactttagcc 11671441  T

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Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 535788 - 535885
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaa 97  Q
    |||||||||||||||||  |||||| |||||||  || ||| ||| |||||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  535788 ggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagccaa 535885  T

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Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 34019152 - 34019241
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    ||||||| ||||||| ||||||||||||| ||||||  || |||| ||||||||||||||||||||||||| |||||||| || ||||||    
T  34019152 gctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaaggggaaaaatgtacttta 34019241  T

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Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 55192014 - 55192095
Alignment:
Q  15 ggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||| ||| | ||||||||||    
T  55192014 ggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaatacactttagcc 55192095  T

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Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 47609792 - 47609697
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||   ||||||| ||||| ||| ||| |||| ||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  47609792 ggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcc 47609697  T

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Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 51037630 - 51037534
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcactttagccaa 97  Q
    |||||| ||||||||||| |||||||||||||||||   ||  ||| ||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  51037630 ggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaagggagaaaagtgcactttagccaa 51037534  T

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Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 5029689 - 5029783
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||| ||||||||||  |||||||| ||||| ||| ||| | ||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  5029689 ggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 5029783  T

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Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 40426785 - 40426877
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggcc-aaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||| |||||||||||||||||| ||||||||| || |||||| ||| |||||| ||||| |||||||  |||||||||||||||||||    
T  40426785 gctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 49216341 - 49216245
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagccaa 97  Q
    ||||||||||| |||| || ||||||||||||||||  || |||| ||||||||||| ||||||||| ||||  | |||||||||||||||||||||    
T  49216341 gctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagccaa 49216245  T

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Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 8876001 - 8875906
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||||||||||||||||  || ||||| |||||||||  |||||  || |||  ||| ||||||||||||||||||    
T  8876001 ggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcc 8875906  T

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Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 46721226 - 46721321
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagcc 95  Q
    |||||||||||||||| | ||||||||||||||||||  || ||||  ||||| |||| ||||| |||||||||||  ||||||||||||||||||    
T  46721226 ggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcc 46721321  T

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Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 52104569 - 52104484
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    ||||||||||| |||||||||| |||||||||||  ||  || |||||||| ||| ||||||||||||||||||||||||||| ||||    
T  52104569 taaatcttaggtggccaaaattatagtttttgtacata--ggaccaaaattacaactttttgaaagttagggggaaaagtgcatttta 52104484  T

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Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 47615596 - 47615649
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  47615596 ggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 47615649  T

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Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 46720036 - 46719940
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcca 96  Q
    ||||||||||||| || | ||||||||||||||| ||  || ||||||||||| |||| ||||| |||||||  ||||||||| |||||||||||||    
T  46720036 ggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcca 46719940  T

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Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 51470462 - 51470555
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||  | ||||||| ||||| ||| ||| |||  | ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  51470462 gctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagttaggggggaagagtgcactttagcc 51470555  T

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Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 54987014 - 54987103
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    |||||||||||| ||| ||||||| |||||||| ||  || ||| | ||||| |||| ||||||||| ||||||||||||||||||||||    
T  54987014 gctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaacttagggggaaaagtgcacttta 54987103  T

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Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 5001275 - 5001200
Alignment:
Q  22 aaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||||| ||||| ||| ||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcc 5001200  T

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Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 19986079 - 19986173
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatg--gggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||| ||| |||||||||||||||| ||  || |  ||||||||||||||||||||||||| |||   |||||||||||||||||||||    
T  19986079 taaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcc 19986173  T

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Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 31645068 - 31645000
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaag 70  Q
    |||||||||||||| ||  |||||||||||||||| | ||| ||||||||||||| |||||||||||||    
T  31645068 ggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

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Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 28262287 - 28262193
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  28262287 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaagtgcactttagcc 28262193  T

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Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 51038803 - 51038900
Alignment:
Q  9 tcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaataatttt 104  Q
    ||||| ||| |||||||||||||||||||   || |||| ||||||||||| ||||| |||||||  || ||||||||||||||||||| ||| ||||    
T  51038803 tcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctatattttt 51038900  T

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Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18442726 - 18442620
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta---gggggaaaagtgcactttagccaat 98  Q
    ||||||| | |||||||||||||||||||||||  ||  |  ||||||||||| ||||  ||||||||||||   ||||| ||||||||||||||||  |    
T  18442726 ggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagccttt 18442627  T
Q  99 aattttt 105  Q
    |||||||    
T  18442626 aattttt 18442620  T

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Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 18456069 - 18456167
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg---gaaaagtgcactttagccaa 97  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  ||||||||||||||||   ||||||||||||||||||||    
T  18456069 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagccaa 18456167  T

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Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 19487800 - 19487694
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta---gggggaaaagtgcactttagccaat 98  Q
    ||||||| | |||||||||||||||||||||||  ||  |  ||||||||||| ||||  ||||||||||||   ||||| ||||||||||||||||  |    
T  19487800 ggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagccttt 19487701  T
Q  99 aattttt 105  Q
    |||||||    
T  19487700 aattttt 19487694  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 53614902 - 53614819
Alignment:
Q  14 gggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||| ||| ||  || | ||||||| ||||||||||||||||  || |||||| ||||||||||||    
T  53614902 gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcc 53614819  T

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Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 23770416 - 23770510
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaa 97  Q
    ||||||||||||||| ||||||||||||||||||  || ||| ||||||||| || ||||| ||| |||  ||| ||||| ||||||||| ||||    
T  23770416 taaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcactttaaccaa 23770510  T

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Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 22775828 - 22775783
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcac 88  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||    
T  22775828 ggggccaaaattgcaactttttgaaagttaggggggaaaagtgcac 22775783  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 6170348 - 6170296
Alignment:
Q  21 aaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta 73  Q
    ||||||||| |||||||| ||| |||  |||||||||||||||||||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagtta 6170296  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 6249685 - 6249633
Alignment:
Q  21 aaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta 73  Q
    |||||||||||||||||| ||| |||   ||||||||||||||||||||||||    
T  6249685 aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 28263117 - 28263212
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagcc 95  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  |||| |||||||||||  ||||||||||||||||||    
T  28263117 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcc 28263212  T

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Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 52276399 - 52276304
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  ||||||||| |||||||  |||||||||||||||||    
T  52276399 ggctaaaacatagggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcc 52276304  T

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Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 52281553 - 52281648
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagcc 95  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  ||||||||| ||||||  ||||||||||||||||||    
T  52281553 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcc 52281648  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 52839132 - 52839037
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    |||||||| |||| |||  |||||||| ||||| ||| |||  ||| ||||||| ||| |||||| |||||||  |||||||| ||||||||||||    
T  52839132 ggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagcc 52839037  T

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Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 22848286 - 22848191
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  22848286 ggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcc 22848191  T

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Target: chr2; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 38840499 - 38840594
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  38840499 ggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 38840594  T

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Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 13030383 - 13030293
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagc 94  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13030383 gctaaatcttagggggcaaaaattgtaatttttgtactta-ggggccaaaattacaagtttttgaaagttagggggaaaagtgcactttagc 13030293  T

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Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 7899888 - 7899983
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||| ||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7899888 ggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7899983  T

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Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 36449871 - 36449778
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||| |||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  36449871 ctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 36449778  T

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Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 18904462 - 18904367
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||| ||||||||  |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  18904462 ggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagcc 18904367  T

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Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 23869541 - 23869635
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| |||||||  || |||||||||||||||||||    
T  23869541 ggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcactttagcc 23869635  T

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Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 38839337 - 38839242
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||| |||  |||| |||| ||||||||||||    
T  38839337 ggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcc 38839242  T

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Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 18905995 - 18906088
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||| | |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  18905995 gctaaatcttagggg-ctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcc 18906088  T

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Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 11258817 - 11258912
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag---ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||   |||||||| ||||||||||||    
T  11258817 ggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcactttagcc 11258912  T

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Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 18299468 - 18299371
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaa 97  Q
    ||||||||| |||||||||||||||||||||||| || ||| | ||||||||||| ||||||||||||||||  || |||||||||||||||||||||    
T  18299468 ggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcactttagccaa 18299371  T

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Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 41878189 - 41878090
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgca---agtttttgaaagtt-agggggaaaagtgcactttagccaa 97  Q
    |||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||   |||||||||||||| |||||| ||||||||||||||||||    
T  41878189 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggggggaaagtgcactttagccaa 41878090  T

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Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 22587960 - 22588054
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||   |||||||| ||||||||||||    
T  22587960 ggctaaatcttaaggggccaaaattgtagtttttgtacata-ggggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcc 22588054  T

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Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 18300743 - 18300822
Alignment:
Q  15 ggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagc 94  Q
    |||| ||||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  18300743 ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagttagggggaaaagtgcaatttagc 18300822  T

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Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 18797342 - 18797246
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg---ggaaaagtgcactttagcc 95  Q
    |||||||| |||||||| |||||||||||||||  || ||| |||| ||||||||||||||||||||||||||||   |||||||||||||||||||    
T  18797342 ggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcc 18797246  T

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Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 18869001 - 18868924
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 18868924  T

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Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 36450928 - 36451018
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    ||||| |||| ||||||| |||||||||||| |||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  36450928 gctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaagggggaaaagtgcacttta 36451018  T

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Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 7898786 - 7898694
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||||||||||||||||||||||||||| | || ||| | ||| ||||||||||||||||||||||||  ||| |||||||||||||||    
T  7898786 ggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

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Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 1034475 - 1034570
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| |||  || ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

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Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 32739706 - 32739638
Alignment:
Q  14 gggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttaggggaaaaa 32739638  T

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Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 13568049 - 13567975
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcacttta 92  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  |||||||||| |||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

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Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 802601 - 802691
Alignment:
Q  6 aaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    ||||||||| ||| |||||||||||||||||||   | |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  802601 aaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaacttaggggggaaaagtacactttagcc 802691  T

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Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 21837121 - 21837064
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaataat 101  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21837121 ggggccaaaattgcaagtttttgaaagttagaggaaaaagtgcactttagccaataat 21837064  T

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Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 24476863 - 24476948
Alignment:
Q  15 ggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaataa 100  Q
    |||| ||||||||||||||||||| ||| ||| |||||||| ||||||||| |||||| |||| ||||||||||| ||||||||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagttgggggaaaaagtgcactctagccaataa 24476948  T

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Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 11938796 - 11938898
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaataa 100  Q
    ||||| |||||||||| ||||||| || |||||||| ||| | | |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||    
T  11938796 gctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctaaaa 11938894  T
Q  101 tttt 104  Q
    ||||    
T  11938895 tttt 11938898  T

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Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 28618016 - 28617937
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    |||||||||||||||||| ||||||| |||||||||| ||  ||||||||||||||||| ||||||||||||||| |||||    
T  28618016 ggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagttagggagaaaa 28617937  T

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Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 21837303 - 21837354
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21837303 ggggccaaaattgcaagtttttgaaagttaggggaaaaagtgcactttagcc 21837354  T

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Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22587596 - 22587522
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg 76  Q
    ||||||||||||||||||||||||||||||||||||||  || ||| ||||||||| || ||||||||||||||||    
T  22587596 aggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagttaggg 22587522  T

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Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 41879219 - 41879313
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||||||||||||||||| |||  |||| ||||||| |||||||||    
T  41879219 gctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcc 41879313  T

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Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16446231 - 16446154
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||| |||  ||||| ||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcc 16446154  T

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Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 24475318 - 24475244
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg 77  Q
    |||||||  |||||||||||||||||||||||| || ||| ||||| |||||| |||||||||||||||||||||    
T  24475318 gctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagttagggg 24475244  T

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Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 11257716 - 11257622
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||||||| ||||||||||||||||||| || ||| |||   |||||||||||||||||||||||  ||| | |||||||||||||||||    
T  11257716 ggctaaatcttaggaggccaaaattgtagtttttatactta-gggtttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcc 11257622  T

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Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 26545527 - 26545621
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg--gggaaaagtgcactttagc 94  Q
    ||||||||||||| ||| ||||||| || |||||||||||| |||| ||||||||||| ||||||||||| | |  || ||||||||||||||||    
T  26545527 ggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcactttagc 26545621  T

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Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 13570565 - 13570658
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagcc 95  Q
    |||| |||| |||| |||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||| |||  ||||| ||||||||||||    
T  13570565 ctaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcc 13570658  T

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Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 1033304 - 1033212
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagc 94  Q
    ||||||||||||| |||   ||||| || |||| ||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  1033304 ggctaaatcttagaggggttaaattataattttggtattta-ggggccaaaattgcaagtttttaaaagttaggggggaaaagtacactttagc 1033212  T

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Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 810791 - 810854
Alignment:
Q  6 aaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaa 69  Q
    ||||||||| ||| |||||||||||||||||||   | ||||||||||||||||||||||||||    
T  810791 aaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaa 810854  T

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Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 8535662 - 8535752
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    |||||| |||||||||| |||||||||||||| | || |||  ||  ||||||| ||||||||| ||||||||| ||||||||| ||||||    
T  8535662 ggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagttaggaggaaaagtgtacttta 8535752  T

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Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 18869169 - 18869242
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattg-caagtttttgaaagttag 74  Q
    ||||||||||||||||   |||||||||||||||||| |||   ||||||||||| ||| ||||||||||||||    
T  18869169 ggctaaatcttaggggataaaaattgtagtttttgtacttagaaggccaaaattgccaaatttttgaaagttag 18869242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 26544242 - 26544152
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcacttta 92  Q
    ||||||||||||| ||| |||| ||||||||||||| ||| ||  ||||||||| || ||||| ||| |||||||  |||||||||||||||    
T  26544242 gctaaatcttaggaggctaaaactgtagtttttgtactta-ggaaccaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 32739744 - 32739693
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattg 56  Q
    |||||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  32739744 ctaaatcttaaggggccaaaattgtagtttttgtatat-gggggccaaaattg 32739693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 5362247 - 5362194
Alignment:
Q  25 ttgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    ||||||||||| |  ||||||||||||||| |||| ||| ||||||||||||||    
T  5362247 ttgtagttttttttcttatggggccaaaatcgcaactttgtgaaagttaggggg 5362194  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 5819741 - 5819813
Alignment:
Q  24 attgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||   |||||||||||||| |||| ||||||||| || |||||| ||||||| | ||||||    
T  5819741 attgtagtttttgttcatatggggccaaaatcgcaactttttgaaacttaaggggggaaagtgcgccttagcc 5819813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8534677 - 8534586
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    ||||||| |||| |||| ||||||||||||||| | || |||  ||  |||||||| |||||||||||| || ||||||||||| ||||||||    
T  8534677 aggctaattctt-ggggaccaaaattgtagtttctatacttaaaggatcaaaattgtaagtttttgaaaattaagggggaaaagagcacttta 8534586  T

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Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 10006439 - 10006341
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaat 98  Q
    ||||||||||||||||||||||||||| |||||  || ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  10006439 ggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccaat 10006341  T

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Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 5514076 - 5513982
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg-aaaagtgcactttagcc 95  Q
    |||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  5514076 ggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagttagggggtaaaagtgcactttagcc 5513982  T

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Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 12353367 - 12353460
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12353367 ggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcc 12353460  T

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Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 1824084 - 1824174
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactt 90  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||  |||||||||| |||||||    
T  1824084 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

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Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 1858529 - 1858619
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactt 90  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||  |||||||||| |||||||    
T  1858529 ggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

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Target: chr8; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 18979126 - 18979220
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagc 94  Q
    ||||||||| || ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  18979126 ggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

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Target: chr8; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 29968343 - 29968434
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    |||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  29968343 ggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaagtgcacttta 29968434  T

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Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32207330 - 32207424
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||||||| | |||||||||||||||||||||| ||| || | |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  32207330 aggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggttaggggggaaagtgcactttagcc 32207424  T

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Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 8388557 - 8388464
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||||||| |||||||||||  || ||||| |||||||||| ||||| |||||||||||| ||||||||||||||||    
T  8388557 ggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagttaggggggaaagtgcactttagcc 8388464  T

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Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 10007769 - 10007869
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaata 99  Q
    |||||||||||||||| |||||||||| |||| | || ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||    
T  10007769 ggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctata 10007868  T
Q  100 a 100  Q
    |    
T  10007869 a 10007869  T

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Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 22221370 - 22221465
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| |||||||||||||||  || ||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22221370 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22221465  T

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Target: chr8; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 22227712 - 22227807
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| |||||||||||||||  || ||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22227712 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22227807  T

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Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 22220483 - 22220386
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaa 97  Q
    |||||||||||||||||||||||||||||||||| ||  || |||| ||||||||||||| ||| ||||||  |||||||||||||||||||||||||    
T  22220483 ggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagccaa 22220386  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12352017 - 12351921
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||  ||||| ||| ||||||||||||    
T  12352017 aggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcc 12351921  T

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Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 18978114 - 18978029
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgc 86  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||| ||||||||||||    
T  18978114 ggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18978029  T

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Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 11287864 - 11287774
Alignment:
Q  9 tcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||| ||||||||||  | |||||||||||||| ||||    
T  11287864 tcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcactttatccaa 11287774  T

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Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 40471156 - 40471244
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcacttta 92  Q
    ||||||||| ||||| ||||||||||||||||||||||| || ||||||||| |||||||| ||||||  ||||||||||||||||||||    
T  40471156 taaatcttaaggggctaaaattgtagtttttgtatttat-ggaccaaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

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Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 24122976 - 24122883
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||| | |||||| ||||||||||| ||| |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||||    
T  24122976 gctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagttaggggggaaaaatgcactttagcc 24122883  T

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Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 1823647 - 1823552
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| || ||||||||||||||||| |||  ||| ||||||||||||||||| |||||||  |||| |||||| ||||||||||    
T  1823647 ggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcc 1823552  T

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Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 1858092 - 1857997
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| || ||||||||||||||||| |||  ||| ||||||||||||||||| |||||||  |||| |||||| ||||||||||    
T  1858092 ggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcc 1857997  T

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Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 24488686 - 24488761
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    |||||||||||| ||||| |||||||| |||||  |||||| |||||||||||||||||||||||||||||||||||    
T  24488686 ggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttaggggg 24488761  T

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Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 11282100 - 11282011
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||||||||| |||||||||  ||||||||| || |||||||||||||||| ||||| |||||||  |||| ||||||||||||||    
T  11282100 taaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

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Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 18971002 - 18970920
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgc 86  Q
    ||||||||  |||| ||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||| ||||||||||||    
T  18971002 taaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18970920  T

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Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 24123904 - 24123996
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||||||||| ||| ||||||||| |||| ||| ||| | |||||||||||||||||||||||||||| ||||  ||||| |||||||||    
T  24123904 ggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacgggg-gaagtgtactttagcc 24123996  T

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Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 2379931 - 2380021
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||||| |||||||||||||||||||  |||  || |||||||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  2379931 gctaaatcttaaggggccaaaattgtagtttc-gtacata-ggggccaaaattacaactttttgaaagttagggggaaaagtaaactttagcc 2380021  T

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Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 30335734 - 30335639
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||  ||||||||| |||||||| |||  | ||||||||||||||||||| |||||||  || |||||| ||||||||||||    
T  30335734 ggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcc 30335639  T

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Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 30336507 - 30336602
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    ||||||||||||| |||  |||||||||||||||||| ||| | ||| ||||||  |||||||||||||||||||||  | |||||||||||||||    
T  30336507 ggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

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Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24359903 - 24359809
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||| |||||||||||||||||||| || | ||| ||||| |||| ||||| |||||||| ||| ||||| |||||||||||    
T  24359903 aggctaaatcttagggggtcaaaattgtagtttttgtatata-gaggcaaaaatcgcaactttttaaaagttagagggaaaaagagcactttagcc 24359809  T

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Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 8389698 - 8389787
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    ||||||||||||| | ||||||||||||||||||  || ||| |||||||||||| ||||||||| |||   ||||||||||||||||||    
T  8389698 taaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

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Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 43661360 - 43661267
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttag 93  Q
    ||||||||||||||||||||||||| |||||||||||  || ||| ||||||||| || ||||| ||| ||| |||  ||||||||||||||||    
T  43661360 ggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

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Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 24483201 - 24483141
Alignment:
Q  39 tttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagccaa 97  Q
    |||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  24483201 tttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagccaa 24483141  T

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Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 5514294 - 5514370
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg-gaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||   ||| |||||||||||||||| ||| |||||||  |||||||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattaggggataaaagtgcactttagcc 5514370  T

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Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 5003104 - 5003197
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagttttt-gtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| | |||||||| |||||| ||| ||| |||   ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  5003104 ggctaaatcttaggggac-aaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagttaggggggaaagtgcgctttagcc 5003197  T

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Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 38974890 - 38974793
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagccaa 97  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  |||||||||||||||||  |||||||||||||||||||    
T  38974890 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 38974793  T

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Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 39005988 - 39005891
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagccaa 97  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  |||||||||||||||||  |||||||||||||||||||    
T  39005988 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 39005891  T

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Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 45114537 - 45114617
Alignment:
Q  17 ggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| ||||  ||  |  |||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcc 45114617  T

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Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 23170034 - 23170098
Alignment:
Q  31 tttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||| ||| |||  ||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaattaggggggaaaatgcactttagcc 23170098  T

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Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 38980050 - 38980145
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  ||||||||||||  ||||||||||||||||||||||    
T  38980050 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38980145  T

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Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 39011147 - 39011242
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  ||||||||||||  ||||||||||||||||||||||    
T  39011147 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39011242  T

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Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 43661833 - 43661924
Alignment:
Q  6 aaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||||| |||||||||||  ||  ||   |||||||||| |||||||||||||  || |||||||||||||| ||||    
T  43661833 aaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcc 43661924  T

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Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 11456691 - 11456638
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagcc 95  Q
    |||||||||||||||| ||||||||| |||||||  ||||||||||||||||||    
T  11456691 ggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcc 11456638  T

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Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 30568981 - 30568887
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||  ||||||| |||||||||||  || | |  |||||||| || ||||||||| |||| |||| ||||||||||||||||    
T  30568981 ggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaacttagagggggaaagtgcactttagcc 30568887  T

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Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 32973942 - 32974039
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagccaa 97  Q
    ||||||| | ||| ||||||||||||| |||||  ||  |  ||||||||||| ||||  |||||||||||||||||  |||||||||||||||||||    
T  32973942 ggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagccaa 32974039  T

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Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 18488274 - 18488331
Alignment:
Q  8 atcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagttttt 65  Q
    ||||||| |||||||||||||||||||||||| || ||| | |||||||||| |||||    
T  18488274 atcttagagggccaaaattgtagtttttgtatataggggactaaaattgcaacttttt 18488331  T

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Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 36249603 - 36249551
Alignment:
Q  46 ggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcca 96  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  36249603 ggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcca 36249551  T

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Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 11283215 - 11283310
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||| ||||||| ||||||||||  ||||| ||  || ||||| |||||| ||| |||||||||||||  ||||| ||| ||||||||||||    
T  11283215 ggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 11288914 - 11288961
Alignment:
Q  50 aaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagcc 11288961  T

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Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 32968551 - 32968456
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    ||||||| | ||| ||||||||||||| |||||  ||  |  ||||||||||| ||||  |||||||||||||  |||||||||||||||||||||    
T  32968551 ggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 32968456  T

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Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 42982663 - 42982758
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||| ||||  |||| |||||||||||||||||| |  | |||||||||||| ||| ||||| ||| ||  ||| |||||||||||||||||||    
T  42982663 ggctaattcttgaggggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcc 42982758  T

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Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 3819541 - 3819487
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||  |||||||| ||| ||||||||| ||||||||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaagggggaaaaatgcactttagccaa 3819487  T

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Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 29043493 - 29043400
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttag 93  Q
    ||||||||||||| |||  ||||||||||||||||||  || |||| |||||| || | |||||||| ||||  || ||||||||| |||||||    
T  29043493 ggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaactttag 29043400  T

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Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 45112964 - 45112875
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg-ggaaaagtgcacttt 91  Q
    |||||| ||||||||| |||||||| || |||||||| ||| | | | |||||| ||| |||||||||||||||| |||||| ||||||||    
T  45112964 ggctaattcttaggggaccaaaattataatttttgtactta-gagactaaaattacaaatttttgaaagttagggaggaaaaatgcacttt 45112875  T

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Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 30570262 - 30570298
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgta 38  Q
    ||||||||||||||||||||||||| || ||||||||    
T  30570262 ggctaaatcttagggggccaaaattctaatttttgta 30570298  T

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Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 8155832 - 8155741
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggg-gccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||| || |||||||||||||||||||||||||||||||||||||||||||    
T  8155832 ggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 8155741  T

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Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 17388217 - 17388317
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagccaataa 100  Q
    |||||| |||| |||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  17388217 ggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcctataa 17388316  T
Q  101 t 101  Q
    |    
T  17388317 t 17388317  T

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Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 19750581 - 19750673
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttag 93  Q
    |||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19750581 ggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 19750673  T

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Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 19789225 - 19789133
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttag 93  Q
    |||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  19789225 ggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 19789133  T

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Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 10471394 - 10471492
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaat 98  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10471394 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccaat 10471492  T

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Target: chr4; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 17383080 - 17382993
Alignment:
Q  9 tcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg-gaaaagtgcactttagcc 95  Q
    |||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17383080 tcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttagcc 17382993  T

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Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 26421628 - 26421722
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    |||||||||||| |||| ||||||||||||||||||| ||| | || |||||||||||||||||||||||||| |||||||||||||||||||||    
T  26421628 ggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagcc 26421722  T

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Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 49308038 - 49308127
Alignment:
Q  6 aaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49308038 aaatcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcc 49308127  T

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Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 1290207 - 1290299
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||| |||||||||||||||||| |||  |||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  1290207 taaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcc 1290299  T

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Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 12129718 - 12129626
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  12129718 ggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

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Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 1835108 - 1835203
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| |||||||||||||||  || ||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  1835108 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagcc 1835203  T

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Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 8758844 - 8758935
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    ||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  8758844 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

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Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 25685828 - 25685923
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  25685828 ggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 25685923  T

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Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 31599884 - 31599789
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||  |||||||||||| ||||    
T  31599884 ggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 31599789  T

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Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 5526132 - 5526226
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| |||||  || ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5526132 ggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagcc 5526226  T

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Target: chr4; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 31600991 - 31601088
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaa 97  Q
    |||||||||||| |||| ||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  31600991 ggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagccaa 31601088  T

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Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 52491613 - 52491714
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaata 99  Q
    |||||||| ||||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||||||  || |||||||| |||||||||| |||    
T  52491613 ggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcctata 52491712  T
Q  100 at 101  Q
    ||    
T  52491713 at 52491714  T

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Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 1963291 - 1963196
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||| ||||||||||| ||||||||||||||||||  || | |||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  1963291 ggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 1963196  T

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Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 8757769 - 8757675
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcactttagcc 95  Q
    |||||||||||| ||| ||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  8757769 ggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaaggggaaaaagtgcactttagcc 8757675  T

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Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13386538 - 13386634
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg---aaaagtgcactttagcc 95  Q
    ||||| ||||||||||| | ||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||    
T  13386538 ggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcc 13386634  T

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Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 35934437 - 35934347
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    |||||||||||| |||||||||||| || ||| | || ||| ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  35934437 ggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagttagggggaaaagtgcacttta 35934347  T

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Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35935538 - 35935631
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||| ||||| |||||||  ||||| |||||||||||||    
T  35935538 aggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

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Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 25685029 - 25684933
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcca 96  Q
    ||||||||||||||||| | ||||||| ||||| ||| |||  ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25685029 ggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcca 25684933  T

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Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 48780343 - 48780248
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||| ||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  48780343 ggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagcc 48780248  T

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Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 1834215 - 1834117
Alignment:
Q  2 ggctaaatcttaggggg-ccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||| ||||||||||||||||| ||  || |||| |||||||| |||||||| ||||||  |||||||||||||||||||||||||    
T  1834215 ggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagccaa 1834117  T

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Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 5525454 - 5525360
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||| |||||||||||||||||||||||||| |||||||| || |||||||||    
T  5525454 ggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaaatgtactttagcc 5525360  T

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Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 10470641 - 10470546
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | |||||||  |||| ||| |||  ||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10470641 ggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10470546  T

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Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33310094 - 33310189
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaa 97  Q
    |||||||||| ||| ||||||||||| ||||||||||||||| || || |||||| ||||||||| ||||||| ||  |||||||||||||||||||    
T  33310094 aggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta-ggaaaaaagtgcactttagccaa 33310189  T

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Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13386112 - 13386014
Alignment:
Q  1 aggctaaatcttagggggcca-aaattgtagtttttgtatttatggggccaaaattgcaagt-ttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||||  | ||||||| ||||| ||| ||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  13386112 aggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagcc 13386014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 10447102 - 10447006
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt---agggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||  |||||||| |||||||||  || ||||| |||||||||| ||||||||| ||   |||||||||||||||||||||||    
T  10447102 ggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

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Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13509365 - 13509459
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||  |||||||||||||||  || ||  |||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  13509365 ggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagttaggggggaaaagtacactttagcc 13509459  T

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Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 48781052 - 48781146
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||| |||||||| | ||||||| ||||| ||| ||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  48781052 ggctaaattttaggggggctaaattgtggttttagtactta-gggaccaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcc 48781146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 49306851 - 49306775
Alignment:
Q  20 caaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg-gaaaagtgcactttagcc 95  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  49306851 caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagttgggggaaaaaagtgcactttagcc 49306775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 10448266 - 10448361
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg--ggaaaagtgcactttagcc 95  Q
    ||||| ||||||| |||||||||||||||||||||||  || ||||| ||||| |||| ||||||||| ||||||  ||  |||||||||||||||    
T  10448266 ggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcc 10448361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 1964454 - 1964544
Alignment:
Q  9 tcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaa 97  Q
    ||||| ||| |||||||||||||||||||   || ||||||||||||| || ||||| |||||||  || |||||||||||||||||||||    
T  1964454 tcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagccaa 1964544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 37728572 - 37728651
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    |||||||||||  ||| |||||||||||||||||||  || | |||||||||||||| ||||| ||||||||| ||||||    
T  37728572 gctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagttaggaggaaaa 37728651  T

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Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 21178091 - 21177997
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||||| |||||||| ||||||||||||||||||   || |||  ||||||||||| ||| ||||||||| ||||| ||||| ||||||||||    
T  21178091 ggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagttagggggggaaagtacactttagcc 21177997  T

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Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 21539078 - 21539140
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagttttt 65  Q
    |||||||||||||||| ||||||||||||||||  | ||| | ||||||||||||||||||||    
T  21539078 gctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagttttt 21539140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 3928864 - 3928959
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    ||||||| | ||| ||||||||||||| |||||  ||  || ||||||||||| ||||  ||||||||||||  ||||||||||||||||||||||    
T  3928864 ggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 3928959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 14868941 - 14868890
Alignment:
Q  45 gggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  14868941 gggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 14868890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 14876993 - 14877044
Alignment:
Q  45 gggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  14876993 gggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcc 14877044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 27257966 - 27258057
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggga-aaagtgcacttta 92  Q
    |||||||||||| ||||  ||||||| ||||||||||| ||  ||| ||||||||||| ||||| ||||||| ||||| |||||||| ||||    
T  27257966 ggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggggagaaagtgcatttta 27258057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 55603549 - 55603628
Alignment:
Q  14 gggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    |||||||||||| ||||||||||||   | |||   ||||||||||||||||||||||| ||||| ||||||||||||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggggaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 55602451 - 55602379
Alignment:
Q  21 aaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt-agggggaaaagtgcacttta 92  Q
    ||||||||||||||| ||| ||  || | ||||||||||||||||||||||| | |||||||| |||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaaaggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 50909678 - 50909776
Alignment:
Q  2 ggctaaatctta-gggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg--gggaaaagtgcactttagccaa 97  Q
    |||||||||||| ||||| |||||||||||||||| ||  || || | |||||| |||| ||||| ||| |||||  || |||||||||||||||||||    
T  50909678 ggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaacttagggtggaaaaagtgcactttagccaa 50909776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 50909365 - 50909287
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    |||||||||||| ||  ||||||||||||||| ||| || | || ||||||||||| ||||| ||| ||||||| ||||    
T  50909365 ctaaatcttaggaggttaaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttaggggaaaaa 50909287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 46638733 - 46638802
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta 73  Q
    |||||||||||||||| ||||||||| |||||||   || |||  ||||||| ||| |||||||||||||    
T  46638733 ctaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttgaaagtta 46638802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 49309718 - 49309771
Alignment:
Q  136 ttttttatttaattcttaagtattaaatttgccacctaaagtggtacaagagtg 189  Q
    |||||||||||  | || | ||||||||||||||||||| ||||||||||||||    
T  49309718 ttttttatttatgtttttattattaaatttgccacctaaggtggtacaagagtg 49309771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 3927761 - 3927666
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    ||||||| | ||| || ||||||||||||||||  ||  |  ||||||||||| ||||  |||| ||||||||  |||||||||||||||||||||    
T  3927761 ggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcc 3927666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 16703659 - 16703568
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaa 97  Q
    ||||| ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16703659 taaattttagggggctaaaattgtagtttttgtatttatggatc-aaaattgcaagtttttgaaagatagggggaaaagtgcactttagccaa 16703568  T

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Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 1829609 - 1829706
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagccaa 97  Q
    |||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||| ||||||||||||  |||||||||||||| ||||    
T  1829609 ggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcactttaaccaa 1829706  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 7316300 - 7316395
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||| |||||||||||||| ||||   |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7316300 ggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7316395  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 8659360 - 8659265
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8659360 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 8659265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 8822799 - 8822902
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaata 99  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  8822799 ggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagccaata 8822898  T
Q  100 attt 103  Q
    ||||    
T  8822899 attt 8822902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 8821967 - 8821873
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| | ||||||| ||||| ||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8821967 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 8821873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 26575063 - 26575150
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcacttta 92  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||| | | |||||||||||||    
T  26575063 taaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagttagagaggaaagtgcacttta 26575150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 7314974 - 7314878
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaa 97  Q
    ||||||||||||||||| ||||||||| |||||  || ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7314974 ggctaaatcttagggggtcaaaattgttgttttgatactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccaa 7314878  T

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Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 14822453 - 14822360
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| |||  ||| |||||||||||| |||||    
T  14822453 ctaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcc 14822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16704502 - 16704598
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||  ||  ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||  || |||||||||||||||||||    
T  16704502 aggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcc 16704598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 14823583 - 14823677
Alignment:
Q  4 ctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg---aaaagtgcactttagcc 95  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||| ||| ||| ||||   |||||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcc 14823677  T

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Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 8660211 - 8660304
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| | ||||||| ||||| ||| ||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8660211 gctaaatcttaggggggctaaattgtggttttggtactta-ggggtcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 8660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 27322074 - 27322173
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagccaataa 100  Q
    |||||| ||||||||||  |||||||| ||||| ||| ||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||    
T  27322074 ggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctataa 27322173  T

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Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 27437922 - 27437828
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| |||||||||||||||| | | || |||||||||||||||| ||||| |||||||  ||| ||||||||||||||||||    
T  27437922 gctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 27437828  T

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Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 6840284 - 6840194
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||||||||| |||| ||||||||| ||| |||| ||||||||||| ||||    
T  6840284 taaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaagggggaaagtgcacttcagcc 6840194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 10784688 - 10784592
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta---gggggaaaagtgcactttagcc 95  Q
    ||||||||||| |||||||||||||||||||||| || ||| ||||  |||||||||||||||| |||||||   | ||||||||||||||||||||    
T  10784688 ggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagcc 10784592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 3721707 - 3721612
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||||| |||| | ||||| | ||||| ||| ||| |||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  3721707 ggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 3721612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 30495703 - 30495805
Alignment:
Q  2 ggctaaatcttag-ggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaataa 100  Q
    ||||||||||||| ||||||||||||||  ||||||||  || |||   ||||| |||| ||||||||||||||||| ||||||||||||||||||| ||    
T  30495703 ggctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagttaggggaaaaagtgcactttagccaaaaa 30495802  T
Q  101 ttt 103  Q
    |||    
T  30495803 ttt 30495805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 27318389 - 27318315
Alignment:
Q  22 aaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa-gtgcactttagcc 95  Q
    ||||||| ||||| ||| ||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggaaaaggtgcactttagcc 27318315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 6842308 - 6842384
Alignment:
Q  21 aaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| |  || |||||||||||||||| ||||||||| ||  |||||||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 34834585 - 34834677
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg--gggaaaagtgcacttta 92  Q
    ||||||||||||||||| | ||||||| |||||  || ||| | |  |||||||||||||||||||||||||||  |||||||||||||||||    
T  34834585 ggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 3722533 - 3722608
Alignment:
Q  22 aaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg--gggaaaagtgcactttagcc 95  Q
    ||||||| ||||| ||| |||  ||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcc 3722608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 10785919 - 10785995
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    |||||||||||| ||||  |||||||||||||||||| ||| ||||  |||||||||| ||||| ||||||||||||    
T  10785919 ggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagttaggggg 10785995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 17496890 - 17496815
Alignment:
Q  5 taaatcttaggggg-ccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggga 79  Q
    |||||||||||||| ||||||||| |||||||||| |||  |||  ||||||| ||||||||||||||||||||||    
T  17496890 taaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagtttttgaaagttaggggga 17496815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 3333032 - 3333127
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcc 95  Q
    |||||||| |||| |||  ||||||||||||||||||  || ||||||||||| |||| ||||| ||| ||||  ||||||||||||| |||||||    
T  3333032 ggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagcc 3333127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 34830997 - 34830921
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg 78  Q
    ||||||||||||||||| | ||||||| ||||| ||| ||| |||||||||  ||||| |||||||||||| |||||    
T  34830997 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaagttcggggg 34830921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 30494651 - 30494569
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagt 84  Q
    ||||||||||||||  ||||||||  |||||||| ||  || || |||||||| | || ||||||||||||||||||||||||    
T  30494651 ggctaaatcttaggaagccaaaatcatagtttttatacatagggtgccaaaatcgtaactttttgaaagttagggggaaaagt 30494569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 26574713 - 26574642
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag 74  Q
    |||||||||||| |||  |||||| |||||||||||| |||  ||  ||||||||||||||||||||||||||    
T  26574713 ggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttag 26574642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 12350892 - 12350823
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt 72  Q
    |||||||||||||||||  ||||||||||||||| ||  || |||| ||||||||||||||| | ||||||    
T  12350892 ggctaaatcttagggggttaaaattgtagtttttatacata-ggggtcaaaattgcaagtttattaaagtt 12350823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3333244 - 3333148
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcca 96  Q
    |||||||||| ||||| ||||||||| |||||||| |   || |||| |||| |||||| ||||| ||| |||  |||||||||| |||||||||||    
T  3333244 aggctaaatcgtagggagccaaaattatagtttttattcatagggggtcaaatttgcaattttttcaaacttataggggaaaagttcactttagcca 3333148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 26717132 - 26717183
Alignment:
Q  44 ggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttag 93  Q
    |||| ||||||||||||||| ||||| |||  ||||||||||||||||||||    
T  26717132 ggggtcaaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 2472 - 2569
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaag-tttttgaaagttagggggaaaagtgcactttagccaata 99  Q
    |||||||| |||||||||||||| || ||||||||| ||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  2472 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagttagggggaaaagtgcactttagctaata 2569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 7095 - 7192
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaag-tttttgaaagttagggggaaaagtgcactttagccaata 99  Q
    |||||||| |||||||||||||| || ||||||||| ||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  7095 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagttagggggaaaagtgcactttagctaata 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 5444 - 5539
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||| |||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  5444 ggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagcc 5539  T

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Target: scaffold0294; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 4537 - 4442
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    |||||||| ||||||||  ||||||||| |||||||| ||| ||||| ||||||| |||||||||||| ||||||||  ||| |||||||||||||    
T  4537 ggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagcc 4442  T

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Target: scaffold0632 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 3314 - 3408
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| |||||||| |||||||||||  ||||||| |||||||| |||||||||||||| | ||||||||||||||||||||||    
T  3314 ggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaagtaaggggggaaaagtgcactttagcc 3408  T

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Target: scaffold0112 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 37242 - 37144
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgc-aagtttttgaaagttagggggaaaagtgcactttagccaata 99  Q
    ||||||||| ||||||||||||||||| ||||||||| ||| |||| ||||||||| || ||||| |||| ||||||||||||||||||||||||||||    
T  37242 ggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagatagggggaaaagtgcactttagccaata 37144  T

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Target: scaffold0302 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 17558 - 17470
Alignment:
Q  9 tcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||  |||| |||||||||||||||||    
T  17558 tcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcc 17470  T

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Target: scaffold0302; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 18782 - 18878
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttag--ggggaaaagtgcactttagcca 96  Q
    |||||||| ||| |||||||||||| |||||||||||  || ||| |||||||||||| ||||| ||||||||  ||| ||||||||||||||||||    
T  18782 ggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcca 18878  T

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Target: scaffold0186 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 23174 - 23073
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaataat 101  Q
    ||||||| ||||||||  ||| ||||| ||||| ||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23174 ggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagttagggggaaaagtgcactttagccaaaaat 23075  T
Q  102 tt 103  Q
    ||    
T  23074 tt 23073  T

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Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 23931 - 23991
Alignment:
Q  37 tatttatggggccaaaattgcaagtttttgaaagttaggggg--aaaagtgcactttagcc 95  Q
    |||||| || |||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  23931 tatttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcactttagcc 23991  T

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Target: scaffold0019 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 61465 - 61559
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagc 94  Q
    ||||||||| ||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||| |||  || ||||||||||||||||||    
T  61465 ggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

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Target: scaffold0019; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 60185 - 60088
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagccaa 97  Q
    ||||||||| ||||||| |||||||||||||||| ||  || |||| ||||||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  60185 ggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagccaa 60088  T

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Target: scaffold0003 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 49440 - 49534
Alignment:
Q  3 gctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||||| |||||||||||||||| | | || |||||||||||||||| ||||| |||||||  ||| ||||||||||||||||||    
T  49440 gctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 49534  T

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Target: scaffold2034 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 328 - 232
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcca 96  Q
    |||||| ||||||||| |||||||| |||||||||||  || ||| |||||||||||| |||||||||||||  ||||| |||||||||||||||||    
T  328 ggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcca 232  T

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Target: scaffold2034; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 984 - 1055
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta 73  Q
    |||||| |||| ||||||||||||| |||||||||||  || ||| |||||||||||| ||||| |||||||    
T  984 ggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagtta 1055  T

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Target: scaffold0320 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 19580 - 19488
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcc 95  Q
    |||||||||||||  |||||||||||||||| || ||| ||||||||||||||||| |||||||| |||  ||||||||| ||||||||||||    
T  19580 taaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcc 19488  T

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Target: scaffold0059 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 4736 - 4829
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttaggg-ggaaaagtgcactttagc 94  Q
    |||||||  |||| ||| |||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||| || |||||||||||||||    
T  4736 ggctaaaatttagagggtcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagttagggagggaaagtgcactttagc 4829  T

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Target: scaffold0059; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 3770 - 3690
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaa 82  Q
    |||||||||||||||| | |||||| |||||| | || | | |||||||||||||||||||||||||||||||||| ||||    
T  3770 ggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagttaggggaaaaa 3690  T

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Target: scaffold1303 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 1534 - 1439
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| ||||||| |||||||| ||  || |||| ||||||||||||||||| ||||||  |||||||||||| ||||||||||    
T  1534 ggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcc 1439  T

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Target: scaffold0586 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 6439 - 6346
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 92  Q
    |||||||||||||||||| |||||||||||||||||||  || ||||| ||||| | || ||||||||| |||  || ||||||||||||||||    
T  6439 aggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

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Target: scaffold0586; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 9033 - 9126
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagg-gggaaaagtgcactttagcc 95  Q
    |||||||||||||||| ||||||||||||||||||||  || | ||| |||||  ||| ||||||||| | ||| || |||||||||||||||||    
T  9033 ggctaaatcttagggg-ccaaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaattaaggaggaaaaagtgcactttagcc 9126  T

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Target: scaffold0369 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 13283 - 13193
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggggaaaagtgcactttagcc 95  Q
    ||||||||||||| | |||||||||||||| |||  || | || ||||||  ||| ||||| |||||||||||||||||||||||||||||    
T  13283 taaatcttaggggacaaaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagttagggggaaaagtgcactttagcc 13193  T

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Target: scaffold0227 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 125 - 222
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagccaa 97  Q
    ||||||| | ||||||||||||||||| |||||  ||  |  ||||||||||| ||||  ||||||||||||||||  ||||||||||||||||||||    
T  125 ggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 222  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 7421 - 7516
Alignment:
Q  2 ggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt--agggggaaaagtgcactttagcc 95  Q
    ||||||||||||||||| |||||||||||||| ||||  || |||| |||||| | || ||||| ||| ||  ||||||| |||||||||||||||    
T  7421 ggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcactttagcc 7516  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7633 - 7537
Alignment:
Q  1 aggctaaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta-gggggaaaagtgcactttagcca 96  Q
    |||||||||| ||||| || |||||||||||||||||   || |||| |||| || ||| ||||| ||| |||  |||| |||||||||||||||||    
T  7633 aggctaaatcgtagggagctaaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttatagggggaaagtgcactttagcca 7537  T

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Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 49109 - 49187
Alignment:
Q  21 aaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaa 97  Q
    ||||||||||||||  || ||| | |||||||||||||||||||| |||||||  || ||||||||||| |||||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagccaa 49187  T

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Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 48399 - 48334
Alignment:
Q  5 taaatcttagggggccaaaattgtagtttttgtatttatggggccaaaattgcaagtttttgaaagtt 72  Q
    ||||||||||||| |||||||| |||||||||||  || ||| |  ||||||||||||||||| ||||    
T  48399 taaatcttaggggaccaaaattatagtttttgtacataggggtc--aaattgcaagtttttgagagtt 48334  T

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