View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18028_high_8 (Length: 319)
Name: NF18028_high_8
Description: NF18028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18028_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 47 - 304
Target Start/End: Original strand, 39801794 - 39802051
Alignment:
| Q |
47 |
tttttaacctttcagggtattaagtgttggaaattctattgctagttgtaatannnnnnnaaaaagtgttaagtaataatcatttaaaattcttcctgtc |
146 |
Q |
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| T |
39801794 |
tttttaacctttcagggtattaagtgttggaaattatattgctagttgtaatattttttaaaaaagtgttaagtaataatcatttaaaattcttcctgtc |
39801893 |
T |
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| Q |
147 |
aaattcatttagaattcttttaccnnnnnnncattcatttaatattccaggaaattttctttacaaattcaattgatgatgattaagactaccctctcat |
246 |
Q |
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| T |
39801894 |
aaattcatttagaattcttgtaccaaaaaaacattcatttaatattccaggaaattttctttacaaattcaattgatgatgattaagactaccctctcat |
39801993 |
T |
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| Q |
247 |
atattccaatacttttatgtaattagacgtcgatttttagttccgcctagtttgtctt |
304 |
Q |
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| T |
39801994 |
atattccaatacttttatgtaattagacgtcgatttttagttccgcctagtttgtctt |
39802051 |
T |
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