View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1802_high_16 (Length: 369)

Name: NF1802_high_16
Description: NF1802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1802_high_16
NF1802_high_16
[»] chr8 (47 HSPs)
chr8 (16-80)||(4953138-4953202)
chr8 (93-169)||(4953191-4953267)
chr8 (315-369)||(6386607-6386661)
chr8 (316-369)||(37618412-37618465)
chr8 (315-369)||(7394834-7394888)
chr8 (315-369)||(8673075-8673129)
chr8 (315-369)||(29563246-29563300)
chr8 (315-369)||(32303605-32303659)
chr8 (318-369)||(15001500-15001551)
chr8 (318-369)||(29672343-29672394)
chr8 (315-369)||(4052511-4052565)
chr8 (315-369)||(14005064-14005118)
chr8 (315-369)||(21272715-21272769)
chr8 (315-369)||(30543042-30543096)
chr8 (315-369)||(37664303-37664357)
chr8 (315-364)||(17520626-17520675)
chr8 (317-369)||(30501178-30501230)
chr8 (315-369)||(10467095-10467149)
chr8 (315-369)||(12753345-12753399)
chr8 (315-369)||(13406955-13407009)
chr8 (315-369)||(27103990-27104044)
chr8 (315-369)||(29611075-29611129)
chr8 (315-369)||(31732095-31732149)
chr8 (315-369)||(34063159-34063213)
chr8 (315-369)||(39642914-39642968)
chr8 (315-369)||(45446486-45446540)
chr8 (315-364)||(10656711-10656760)
chr8 (315-362)||(10320304-10320351)
chr8 (315-362)||(32020028-32020075)
chr8 (318-369)||(41709811-41709862)
chr8 (315-369)||(3251676-3251730)
chr8 (315-369)||(7591467-7591521)
chr8 (315-369)||(17805722-17805776)
chr8 (315-369)||(31513603-31513657)
chr8 (315-369)||(34101539-34101593)
chr8 (315-369)||(35225693-35225747)
chr8 (315-369)||(41548649-41548703)
chr8 (316-359)||(40389072-40389115)
chr8 (315-369)||(5968884-5968938)
chr8 (319-353)||(14958993-14959027)
chr8 (318-364)||(16595174-16595220)
chr8 (315-369)||(25478274-25478328)
chr8 (315-353)||(36426283-36426321)
chr8 (315-369)||(45114086-45114140)
chr8 (318-351)||(22756449-22756482)
chr8 (316-369)||(27109561-27109614)
chr8 (317-369)||(18216670-18216722)
[»] chr6 (37 HSPs)
chr6 (315-369)||(10324155-10324209)
chr6 (315-369)||(11279159-11279213)
chr6 (315-369)||(166967-167021)
chr6 (315-359)||(11382095-11382139)
chr6 (315-369)||(2614927-2614981)
chr6 (315-369)||(3259714-3259768)
chr6 (315-369)||(10960031-10960085)
chr6 (315-369)||(18597202-18597256)
chr6 (315-369)||(24203393-24203447)
chr6 (315-369)||(24242695-24242749)
chr6 (315-369)||(29054387-29054441)
chr6 (315-369)||(32132424-32132478)
chr6 (315-369)||(34684027-34684081)
chr6 (316-369)||(11613835-11613888)
chr6 (315-369)||(3932851-3932905)
chr6 (315-369)||(4494159-4494213)
chr6 (318-364)||(7396174-7396220)
chr6 (315-369)||(8177925-8177979)
chr6 (315-369)||(10485188-10485242)
chr6 (315-369)||(14808045-14808099)
chr6 (315-369)||(15276981-15277035)
chr6 (315-369)||(15277324-15277378)
chr6 (315-369)||(18057550-18057604)
chr6 (315-369)||(31870144-31870198)
chr6 (315-364)||(11212288-11212337)
chr6 (315-362)||(17443293-17443340)
chr6 (315-369)||(3379741-3379795)
chr6 (315-369)||(9902702-9902756)
chr6 (315-369)||(14925500-14925554)
chr6 (315-369)||(17867866-17867920)
chr6 (315-369)||(17877649-17877703)
chr6 (315-369)||(32409896-32409950)
chr6 (318-353)||(23636257-23636292)
chr6 (318-369)||(32860085-32860136)
chr6 (319-369)||(34176865-34176915)
chr6 (320-369)||(11675418-11675467)
chr6 (170-202)||(24242539-24242571)
[»] chr3 (45 HSPs)
chr3 (315-369)||(21221359-21221413)
chr3 (315-369)||(1344706-1344760)
chr3 (315-369)||(19906794-19906848)
chr3 (315-369)||(21373962-21374016)
chr3 (315-369)||(25860420-25860474)
chr3 (315-369)||(28675822-28675876)
chr3 (315-369)||(29584907-29584961)
chr3 (315-369)||(50678830-50678884)
chr3 (316-369)||(49748910-49748963)
chr3 (316-369)||(51925207-51925260)
chr3 (315-369)||(3864674-3864728)
chr3 (315-369)||(4851455-4851509)
chr3 (315-369)||(20609647-20609701)
chr3 (315-369)||(34026699-34026753)
chr3 (315-369)||(39052837-39052891)
chr3 (315-369)||(42636402-42636456)
chr3 (316-369)||(29646099-29646152)
chr3 (315-364)||(53557799-53557848)
chr3 (315-369)||(3964320-3964374)
chr3 (315-369)||(24571313-24571367)
chr3 (315-369)||(25927326-25927380)
chr3 (315-361)||(33364785-33364831)
chr3 (315-369)||(38213386-38213440)
chr3 (315-369)||(40094535-40094589)
chr3 (315-369)||(47958431-47958485)
chr3 (315-369)||(51259779-51259833)
chr3 (315-364)||(34351372-34351421)
chr3 (321-369)||(2135108-2135156)
chr3 (318-369)||(3867648-3867699)
chr3 (315-369)||(12349170-12349224)
chr3 (315-369)||(31883021-31883075)
chr3 (315-369)||(44116971-44117025)
chr3 (315-369)||(51296613-51296667)
chr3 (315-369)||(54622795-54622849)
chr3 (315-364)||(5442323-5442372)
chr3 (315-359)||(3695301-3695345)
chr3 (315-362)||(14155466-14155513)
chr3 (315-358)||(23322173-23322216)
chr3 (318-353)||(42547385-42547420)
chr3 (315-369)||(20255077-20255130)
chr3 (315-369)||(26282386-26282440)
chr3 (315-369)||(50386455-50386509)
chr3 (315-360)||(24721517-24721562)
chr3 (315-355)||(22484756-22484796)
chr3 (318-362)||(44000296-44000340)
[»] scaffold0650 (1 HSPs)
scaffold0650 (315-369)||(1654-1708)
[»] scaffold0169 (2 HSPs)
scaffold0169 (315-369)||(12547-12601)
scaffold0169 (315-369)||(18065-18119)
[»] scaffold0027 (1 HSPs)
scaffold0027 (315-369)||(15203-15257)
[»] chr7 (50 HSPs)
chr7 (315-369)||(1870170-1870224)
chr7 (315-369)||(21784906-21784960)
chr7 (315-369)||(32873775-32873829)
chr7 (315-369)||(10932563-10932617)
chr7 (315-369)||(11321891-11321945)
chr7 (315-369)||(18386560-18386614)
chr7 (315-369)||(23349297-23349351)
chr7 (315-369)||(26910416-26910470)
chr7 (315-369)||(26994231-26994285)
chr7 (315-369)||(36769575-36769629)
chr7 (315-369)||(41211206-41211260)
chr7 (315-369)||(41665581-41665635)
chr7 (315-369)||(43158692-43158746)
chr7 (315-369)||(43189248-43189302)
chr7 (315-369)||(44748730-44748784)
chr7 (315-369)||(47316704-47316758)
chr7 (315-369)||(47953225-47953279)
chr7 (317-369)||(329507-329559)
chr7 (315-362)||(46633732-46633779)
chr7 (315-369)||(1363671-1363725)
chr7 (315-369)||(26371815-26371869)
chr7 (315-369)||(26652901-26652955)
chr7 (315-369)||(34295410-34295464)
chr7 (315-369)||(34519543-34519597)
chr7 (315-369)||(40753190-40753244)
chr7 (315-369)||(43213931-43213985)
chr7 (19-80)||(10482127-10482188)
chr7 (316-369)||(30849252-30849305)
chr7 (321-369)||(30599014-30599062)
chr7 (318-369)||(3922709-3922760)
chr7 (318-369)||(29661361-29661412)
chr7 (331-369)||(11250668-11250706)
chr7 (315-369)||(18470719-18470773)
chr7 (315-369)||(22724537-22724591)
chr7 (315-369)||(38301378-38301431)
chr7 (315-369)||(46408924-46408978)
chr7 (316-369)||(16963174-16963227)
chr7 (321-358)||(17237117-17237154)
chr7 (315-364)||(48699433-48699482)
chr7 (315-363)||(35645482-35645530)
chr7 (315-358)||(42332094-42332137)
chr7 (315-369)||(3892032-3892086)
chr7 (315-369)||(22631773-22631827)
chr7 (315-369)||(34117487-34117541)
chr7 (315-369)||(43368236-43368290)
chr7 (315-364)||(9913560-9913609)
chr7 (315-364)||(9927248-9927297)
chr7 (316-369)||(20127325-20127378)
chr7 (325-369)||(11822268-11822312)
chr7 (316-364)||(22724043-22724091)
[»] chr5 (41 HSPs)
chr5 (315-369)||(7208241-7208295)
chr5 (315-369)||(32528746-32528800)
chr5 (315-369)||(39918538-39918592)
chr5 (315-369)||(41790473-41790527)
chr5 (315-364)||(6284314-6284363)
chr5 (317-369)||(4689709-4689761)
chr5 (318-369)||(700612-700663)
chr5 (315-362)||(31770609-31770656)
chr5 (315-369)||(553428-553482)
chr5 (315-369)||(2351711-2351765)
chr5 (315-369)||(4818151-4818205)
chr5 (315-369)||(5571655-5571709)
chr5 (315-369)||(7523203-7523257)
chr5 (315-369)||(8136868-8136922)
chr5 (315-369)||(21739172-21739226)
chr5 (315-369)||(22493430-22493484)
chr5 (315-369)||(28090531-28090585)
chr5 (315-369)||(31644477-31644531)
chr5 (315-369)||(39788224-39788278)
chr5 (315-369)||(3735388-3735442)
chr5 (323-369)||(5673178-5673224)
chr5 (315-369)||(11963372-11963426)
chr5 (315-369)||(22432320-22432374)
chr5 (315-369)||(24036261-24036315)
chr5 (315-369)||(27839084-27839138)
chr5 (315-369)||(34794918-34794972)
chr5 (315-369)||(35701308-35701362)
chr5 (315-369)||(40182495-40182549)
chr5 (317-369)||(7770290-7770342)
chr5 (317-369)||(29241411-29241463)
chr5 (315-369)||(18470439-18470493)
chr5 (315-369)||(23091315-23091369)
chr5 (315-369)||(24181635-24181689)
chr5 (315-369)||(31880087-31880141)
chr5 (315-369)||(40489368-40489422)
chr5 (315-369)||(41459620-41459674)
chr5 (321-360)||(32093001-32093040)
chr5 (315-369)||(5598511-5598565)
chr5 (315-353)||(7725836-7725874)
chr5 (315-369)||(8560993-8561047)
chr5 (315-361)||(11090887-11090933)
[»] chr4 (64 HSPs)
chr4 (315-369)||(12600920-12600974)
chr4 (315-369)||(23521914-23521968)
chr4 (315-369)||(38812554-38812608)
chr4 (315-369)||(55065331-55065385)
chr4 (315-364)||(21202773-21202822)
chr4 (315-369)||(3649670-3649724)
chr4 (315-369)||(6776612-6776666)
chr4 (315-369)||(20802529-20802583)
chr4 (315-369)||(21580060-21580114)
chr4 (315-369)||(22318382-22318436)
chr4 (315-369)||(24002373-24002427)
chr4 (315-369)||(28115286-28115340)
chr4 (315-369)||(29785535-29785589)
chr4 (315-369)||(33177030-33177084)
chr4 (315-369)||(33552840-33552894)
chr4 (315-369)||(38486255-38486309)
chr4 (315-369)||(43641133-43641187)
chr4 (315-369)||(47642489-47642543)
chr4 (315-369)||(49152098-49152152)
chr4 (315-369)||(50727911-50727965)
chr4 (315-369)||(50735925-50735979)
chr4 (315-369)||(52319357-52319411)
chr4 (315-369)||(52949754-52949808)
chr4 (315-369)||(56154655-56154709)
chr4 (316-369)||(44324340-44324393)
chr4 (317-369)||(16320555-16320607)
chr4 (315-358)||(50729551-50729594)
chr4 (315-369)||(1231345-1231399)
chr4 (315-369)||(2629949-2630003)
chr4 (315-369)||(2725131-2725184)
chr4 (315-369)||(7554955-7555009)
chr4 (315-369)||(9512338-9512392)
chr4 (315-369)||(20694405-20694459)
chr4 (315-369)||(25978609-25978663)
chr4 (315-369)||(32181297-32181351)
chr4 (315-369)||(36743686-36743740)
chr4 (315-369)||(37695539-37695593)
chr4 (315-369)||(37865787-37865841)
chr4 (315-369)||(41711881-41711935)
chr4 (315-369)||(44649162-44649216)
chr4 (315-369)||(46680508-46680562)
chr4 (315-369)||(50186562-50186616)
chr4 (315-364)||(24210353-24210402)
chr4 (316-369)||(37931955-37932008)
chr4 (315-364)||(43739495-43739544)
chr4 (315-363)||(55593919-55593967)
chr4 (315-369)||(23327952-23328007)
chr4 (315-369)||(53200641-53200696)
chr4 (315-369)||(4325825-4325879)
chr4 (315-369)||(26083373-26083427)
chr4 (315-369)||(36497251-36497305)
chr4 (315-369)||(36885966-36886020)
chr4 (315-369)||(39078695-39078749)
chr4 (331-369)||(47361411-47361449)
chr4 (332-369)||(7001903-7001940)
chr4 (318-362)||(9947966-9948010)
chr4 (325-369)||(42772832-42772876)
chr4 (315-369)||(20518020-20518074)
chr4 (315-369)||(30942822-30942876)
chr4 (315-353)||(45577706-45577744)
chr4 (315-369)||(54543024-54543077)
chr4 (315-360)||(9807190-9807235)
chr4 (324-369)||(52673854-52673899)
chr4 (316-364)||(38520534-38520582)
[»] chr2 (47 HSPs)
chr2 (315-369)||(7258928-7258982)
chr2 (315-369)||(7761578-7761632)
chr2 (315-369)||(9732935-9732989)
chr2 (319-369)||(40832474-40832524)
chr2 (315-369)||(16104305-16104359)
chr2 (315-369)||(16177888-16177942)
chr2 (315-369)||(17540746-17540800)
chr2 (315-369)||(19513694-19513748)
chr2 (315-369)||(35114816-35114870)
chr2 (315-369)||(37003873-37003927)
chr2 (315-369)||(37308686-37308740)
chr2 (315-369)||(41366115-41366169)
chr2 (315-369)||(42706390-42706444)
chr2 (315-369)||(44284660-44284714)
chr2 (315-364)||(3913470-3913519)
chr2 (315-364)||(9717255-9717304)
chr2 (315-362)||(33889274-33889321)
chr2 (315-369)||(1247178-1247232)
chr2 (315-369)||(2645091-2645145)
chr2 (315-369)||(5278839-5278893)
chr2 (315-369)||(6896199-6896253)
chr2 (315-369)||(12939305-12939359)
chr2 (315-369)||(18685867-18685921)
chr2 (315-369)||(26418954-26419008)
chr2 (315-369)||(26796259-26796313)
chr2 (315-369)||(28824562-28824616)
chr2 (315-369)||(32497946-32498000)
chr2 (315-369)||(38623309-38623363)
chr2 (315-369)||(40692328-40692382)
chr2 (316-369)||(4641548-4641601)
chr2 (315-364)||(30326341-30326390)
chr2 (318-369)||(30798494-30798545)
chr2 (315-354)||(38993091-38993130)
chr2 (315-369)||(10399875-10399929)
chr2 (315-369)||(11114903-11114957)
chr2 (315-369)||(12672479-12672533)
chr2 (315-369)||(26981714-26981768)
chr2 (315-369)||(33366641-33366695)
chr2 (315-361)||(34338841-34338887)
chr2 (318-353)||(18127009-18127044)
chr2 (334-369)||(27462807-27462842)
chr2 (334-369)||(32766509-32766544)
chr2 (322-369)||(45463115-45463162)
chr2 (315-369)||(2086103-2086157)
chr2 (315-369)||(42365608-42365662)
chr2 (332-369)||(8112348-8112385)
chr2 (315-359)||(38786544-38786588)
[»] chr1 (50 HSPs)
chr1 (315-369)||(1351515-1351569)
chr1 (315-369)||(6029381-6029435)
chr1 (315-369)||(13994155-13994209)
chr1 (315-369)||(16437402-16437456)
chr1 (315-369)||(41967929-41967983)
chr1 (315-369)||(45490955-45491009)
chr1 (315-364)||(31004172-31004221)
chr1 (316-369)||(51264536-51264589)
chr1 (315-369)||(844804-844858)
chr1 (315-369)||(1601213-1601267)
chr1 (315-369)||(6711126-6711180)
chr1 (315-369)||(16386894-16386948)
chr1 (315-369)||(17887988-17888042)
chr1 (315-369)||(26764875-26764929)
chr1 (315-369)||(28340383-28340437)
chr1 (315-369)||(41972951-41973005)
chr1 (315-369)||(42705318-42705372)
chr1 (315-369)||(44738122-44738176)
chr1 (315-369)||(50382483-50382537)
chr1 (316-369)||(25539896-25539949)
chr1 (315-369)||(7183958-7184012)
chr1 (315-369)||(12890278-12890332)
chr1 (315-369)||(16451167-16451221)
chr1 (315-369)||(16476235-16476289)
chr1 (315-369)||(30105760-30105814)
chr1 (315-369)||(32270393-32270447)
chr1 (315-369)||(35387391-35387445)
chr1 (315-369)||(38663172-38663226)
chr1 (315-369)||(42510565-42510619)
chr1 (315-369)||(50540384-50540438)
chr1 (316-369)||(32289424-32289477)
chr1 (316-369)||(45658862-45658915)
chr1 (315-369)||(24339718-24339773)
chr1 (315-369)||(16704766-16704820)
chr1 (315-369)||(26118295-26118349)
chr1 (315-369)||(39281934-39281988)
chr1 (315-369)||(570426-570482)
chr1 (315-364)||(5109768-5109817)
chr1 (316-369)||(11772712-11772765)
chr1 (315-364)||(39792847-39792896)
chr1 (321-369)||(17327729-17327777)
chr1 (318-353)||(34283912-34283947)
chr1 (315-369)||(6144066-6144120)
chr1 (315-369)||(38087076-38087130)
chr1 (315-369)||(42512850-42512904)
chr1 (315-369)||(50304691-50304745)
chr1 (321-362)||(2761643-2761684)
chr1 (316-369)||(23799617-23799670)
chr1 (315-364)||(26733595-26733644)
chr1 (321-369)||(10384413-10384461)
[»] scaffold0050 (1 HSPs)
scaffold0050 (321-369)||(42961-43009)
[»] scaffold0729 (1 HSPs)
scaffold0729 (315-369)||(4590-4644)
[»] scaffold0360 (1 HSPs)
scaffold0360 (315-369)||(15392-15446)
[»] scaffold0208 (1 HSPs)
scaffold0208 (315-369)||(2349-2403)
[»] scaffold0014 (1 HSPs)
scaffold0014 (315-369)||(101980-102034)
[»] scaffold0004 (1 HSPs)
scaffold0004 (315-369)||(372975-373029)
[»] scaffold0181 (1 HSPs)
scaffold0181 (315-369)||(19101-19155)
[»] scaffold0054 (1 HSPs)
scaffold0054 (315-369)||(23606-23660)
[»] scaffold0155 (1 HSPs)
scaffold0155 (316-364)||(33560-33608)
[»] scaffold0025 (1 HSPs)
scaffold0025 (317-369)||(5451-5503)
[»] scaffold0280 (1 HSPs)
scaffold0280 (315-369)||(13698-13752)
[»] scaffold0098 (1 HSPs)
scaffold0098 (315-369)||(51470-51523)
[»] scaffold0957 (1 HSPs)
scaffold0957 (315-364)||(2512-2560)


Alignment Details
Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 4953138 - 4953202
Alignment:
Q  16 ataaaattgttgcttgaattctaataatttgctgtaaaattaaaaaggtgagcaaaaccaaaagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4953138 ataaaattgttgcttgaattctaataatttgctgtaaaattaaaaaggtgagcaaaaccaaaagg 4953202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 4953191 - 4953267
Alignment:
Q  93 aaaaccaaaaggttatcaattttaattttgtggccacggttaatttgctgatgttatgagttaagacgtgtcaataa 169  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4953191 aaaaccaaaaggttttaaattttaattttttggccacggttaatttgctgatgttatgagttaagacgtgtcaataa 4953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 6386607 - 6386661
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6386607 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 6386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 37618465 - 37618412
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37618465 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 37618412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 7394888 - 7394834
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  7394888 gacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaat 7394834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 8673129 - 8673075
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  8673129 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 8673075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 29563300 - 29563246
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29563300 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 29563246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 32303659 - 32303605
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  32303659 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 32303605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 15001500 - 15001551
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15001500 aacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 15001551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 369
Target Start/End: Complemental strand, 29672394 - 29672343
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29672394 aacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 29672343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 4052511 - 4052565
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  4052511 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 4052565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 14005118 - 14005064
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  14005118 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaat 14005064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 21272715 - 21272769
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  21272715 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 21272769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 30543096 - 30543042
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  30543096 gacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaat 30543042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 37664357 - 37664303
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  37664357 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 37664303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 17520626 - 17520675
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17520626 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggaca 17520675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 30501178 - 30501230
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  30501178 caacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 30501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 10467095 - 10467149
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||    
T  10467095 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgaggaacaaaaat 10467149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 12753399 - 12753345
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||    
T  12753399 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaggaacaaaaat 12753345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 13407009 - 13406955
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||| ||||    
T  13407009 gacaacttgtacgtgagacaaaaaattatgctgtggtttggtgagggacaaaaat 13406955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 27103990 - 27104044
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||    
T  27103990 gacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaat 27104044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 29611129 - 29611075
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  29611129 gacaacttttacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaat 29611075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 31732095 - 31732149
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||    
T  31732095 gacaacttgtatgtgagacaaaaagttgtactgtggtttggtgagggacaaaaat 31732149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 34063159 - 34063213
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||    
T  34063159 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaat 34063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 39642914 - 39642968
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  39642914 gacaacctgtacgtgggacagaaagttgtgttgtggtttggtgagggacaaaaat 39642968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 45446486 - 45446540
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||    
T  45446486 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaat 45446540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 10656760 - 10656711
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  10656760 gacaatttgtacgtgagacaaaaagttgtgttgtggttttgtgaaggaca 10656711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 10320351 - 10320304
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||    
T  10320351 gacaacttgtacgtgtggtaaaaagttgtgttgtggtttggtgaggga 10320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 32020075 - 32020028
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||    
T  32020075 gacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgaggga 32020028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 41709811 - 41709862
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||| ||||    
T  41709811 aacttgtacgttggacaaaaagttgtgctgtggtttggtgagggacaaaaat 41709862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 3251730 - 3251676
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  || ||||||||||| ||||||||||||||||||| ||||    
T  3251730 gacaacttgtacgtaggataaaaagttgtgatgtggtttggtgagggacaaaaat 3251676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 7591521 - 7591467
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| |||||||||||||||||||||||| ||||| ||| ||||    
T  7591521 gacaacttatacgtgtgacaaaaagttgtgttgtggtttgctgaggcacaaaaat 7591467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 17805722 - 17805776
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||| ||| ||||    
T  17805722 gacaacttgtacgtgagacaaagagttgtgctttggtttggtgaggaacaaaaat 17805776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 31513657 - 31513603
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| |  |||||||||||||| ||||||||||||||||||| ||||    
T  31513657 gacaacttgtacctaggacaaaaagttgtgctgtggtttggtgagggacaaaaat 31513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 34101539 - 34101593
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||  | |||||||| |||||||||||||||||||||| ||||    
T  34101539 gacaacttgtacgtggaaaaaaaagttatgttgtggtttggtgagggacaaaaat 34101593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 35225693 - 35225747
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||| |||||||||| |||||||| ||||    
T  35225693 gacaacttgtacttgtgacaaaaagttgtgatgtggtttggcgagggacaaaaat 35225747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 41548649 - 41548703
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||| ||| ||||    
T  41548649 gacaacttgtacgtgggacaaaaagttgtgttgtggtctgctgaggtacaaaaat 41548703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 359
Target Start/End: Original strand, 40389072 - 40389115
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag 359  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||    
T  40389072 acaacttgtatgtgggacaaaaagttgtgctgtggtttggtgag 40389115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 5968938 - 5968884
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||| || ||||||||||| ||||||||||||| ||||| ||||    
T  5968938 gacaatttgtacgtgggataaaaagttgtgctgtggtttggtgaaggacaaaaat 5968884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 14958993 - 14959027
Alignment:
Q  319 acttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    ||||||||||| |||||||||||||||||||||||    
T  14958993 acttgtacgtgggacaaaaagttgtgttgtggttt 14959027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 16595220 - 16595174
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||| |||||||||||||||||||| || | ||||||||    
T  16595220 aacttgtacgtgggacaaaaagttgtgttgtggattagcgagggaca 16595174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 25478274 - 25478328
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||| |||| |||| ||||||||| ||||    
T  25478274 gacaacttgtacgtaggacaaaaagttgtgctgtgatttgatgagggacaaaaat 25478328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 353
Target Start/End: Complemental strand, 36426321 - 36426283
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  36426321 gacaacttgtatgtgagacaaaaagatgtgttgtggttt 36426283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 45114086 - 45114140
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| |  |||||||||||||  ||||||||||||||||||| ||||    
T  45114086 gacaacttgtacctatgacaaaaagttgtactgtggtttggtgagggacaaaaat 45114140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 351
Target Start/End: Complemental strand, 22756482 - 22756449
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggt 351  Q
    ||||||||||||| ||||||||||||||||||||    
T  22756482 aacttgtacgtgatacaaaaagttgtgttgtggt 22756449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 27109614 - 27109561
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||| ||||||| | |||||||||||||||||||||||||| ||| ||| ||||    
T  27109614 acaatttgtacgcgggacaaaaagttgtgttgtggtttggtaaggaacaaaaat 27109561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 18216722 - 18216670
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| ||| |||||||| || ||||||||| |||| |||||||||||||||    
T  18216722 caacttatacatgagacaagaatttgtgttgttgtttagtgagggacacaaat 18216670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 10324209 - 10324155
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10324209 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 10324155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 11279159 - 11279213
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11279159 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 11279213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 167021 - 166967
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  167021 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 166967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 11382095 - 11382139
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11382095 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag 11382139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 2614927 - 2614981
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  2614927 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 3259714 - 3259768
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  3259714 gacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 3259768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 10960031 - 10960085
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  10960031 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaat 10960085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 18597256 - 18597202
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  18597256 gacaacttatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 18597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 24203393 - 24203447
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  24203393 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 24203447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 24242695 - 24242749
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  24242695 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 24242749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 29054387 - 29054441
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  29054387 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagggacaaaaat 29054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 32132478 - 32132424
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  32132478 gacaacttgtacgtgggacaaaaagttgtgttgtggattggtgagggacaaaaat 32132424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 34684081 - 34684027
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  34684081 gacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaaaat 34684027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 11613888 - 11613835
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  11613888 acaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 11613835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 3932905 - 3932851
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||    
T  3932905 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagagacaaaaat 3932851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 4494213 - 4494159
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||    
T  4494213 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 4494159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 7396220 - 7396174
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  7396220 aacttgtacgtgagacaaaaagttgtgtagtggtttagtgagggaca 7396174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 8177979 - 8177925
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||    
T  8177979 gacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaat 8177925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 10485188 - 10485242
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  10485188 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaat 10485242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 14808099 - 14808045
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||| ||||    
T  14808099 gacaacctatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 14808045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 15277035 - 15276981
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||||    
T  15277035 gacaacttgtacgtgggaaaaaaagttgtgatgtggtttggtgagggacaaaaat 15276981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 15277378 - 15277324
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||||    
T  15277378 gacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaat 15277324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 18057550 - 18057604
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||    
T  18057550 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 18057604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 31870198 - 31870144
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||| ||||    
T  31870198 gacaacctatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 31870144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 11212288 - 11212337
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  11212288 gacaacttgcacgtgagacaaaaggttatgttgtggtttggtgagggaca 11212337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 17443293 - 17443340
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||    
T  17443293 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgaggga 17443340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 3379741 - 3379795
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| |||||||||||||||||| | |||||||||||| |||| ||||    
T  3379741 gacaacttgtatgtgagacaaaaagttgtgctatggtttggtgagcgacaaaaat 3379795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 9902756 - 9902702
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||  ||||||||| ||||    
T  9902756 gacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaat 9902702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 14925554 - 14925500
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||  ||||||||||||||||||| ||||    
T  14925554 gacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 14925500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 17867866 - 17867920
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  17867866 gacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaat 17867920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 17877649 - 17877703
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  17877649 gacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaat 17877703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 32409950 - 32409896
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||  ||| |||||||||||||| ||||||||||||||||||| ||||    
T  32409950 gacaacttgtgagtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 32409896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 23636257 - 23636292
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    ||||||||||||||||||||| ||||||||||||||    
T  23636257 aacttgtacgtgagacaaaaatttgtgttgtggttt 23636292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 32860085 - 32860136
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||| |||||| |||||||||| || ||||| ||||    
T  32860085 aacttgtacgtgagacaaaaggttgtgctgtggtttggcgatggacaaaaat 32860136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 34176865 - 34176915
Alignment:
Q  319 acttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| |||||||||||||| |||| ||||||||| |||| ||||    
T  34176865 acttgtacgtgggacaaaaagttgtgctgtgatttggtgagagacaaaaat 34176915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 11675467 - 11675418
Alignment:
Q  320 cttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| || ||||||||||||| |||||||||||| |||| ||||    
T  11675467 cttgtacgtgggataaaaagttgtgttatggtttggtgagagacaaaaat 11675418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 24242539 - 24242571
Alignment:
Q  170 atgtttagtttgcaaaacagcaagtactggaca 202  Q
    |||||| ||||||||||||||||||||||||||    
T  24242539 atgtttggtttgcaaaacagcaagtactggaca 24242571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 21221413 - 21221359
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21221413 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 21221359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 1344760 - 1344706
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  1344760 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 1344706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 19906794 - 19906848
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  19906794 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 19906848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 21373962 - 21374016
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21373962 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 21374016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 25860474 - 25860420
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  25860474 gacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaat 25860420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 28675822 - 28675876
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  28675822 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 28675876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 29584907 - 29584961
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29584907 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 29584961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 50678830 - 50678884
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  50678830 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagagacaaaaat 50678884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 49748963 - 49748910
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  49748963 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 49748910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 51925260 - 51925207
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  51925260 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 51925207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 3864728 - 3864674
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  3864728 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaat 3864674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 4851509 - 4851455
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  4851509 gacaacttgtacgtgggacaaaaagttgtgttgtgggttggtgagggacaaaaat 4851455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 20609701 - 20609647
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  20609701 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 20609647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 34026699 - 34026753
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  34026699 gacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaat 34026753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 39052891 - 39052837
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  39052891 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaat 39052837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 42636456 - 42636402
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  42636456 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 42636402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 29646099 - 29646152
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  29646099 acaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 29646152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 53557848 - 53557799
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  53557848 gacaacttgtacgtgagacaaaaagttgtgcagtggtttggtgagggaca 53557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 3964320 - 3964374
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  3964320 gacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 3964374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 24571313 - 24571367
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  24571313 gacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 24571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 25927380 - 25927326
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||    
T  25927380 gacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaagggacaaaaat 25927326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 33364831 - 33364785
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggg 361  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  33364831 gacaacttgtacgtgagacaaaaagttgtgatgtggtttgctgaggg 33364785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 38213386 - 38213440
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||    
T  38213386 gacaacttgtacgtgggacaaaaagttgtgttgtggtttcgtgagtgacaaaaat 38213440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 40094535 - 40094589
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  40094535 gacaatttgtacgtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaat 40094589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 47958485 - 47958431
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  47958485 gacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaat 47958431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 51259833 - 51259779
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||    
T  51259833 gacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaat 51259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 34351421 - 34351372
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  34351421 gacaacttgtatgtgcgacaaaaagttgtgttgtggtttgatgagggaca 34351372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 2135108 - 2135156
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  2135108 ttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2135156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 369
Target Start/End: Complemental strand, 3867699 - 3867648
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||| ||||    
T  3867699 aacttgtacgtaggacaaaaagttgtgctgtggtttggtgagggacaaaaat 3867648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 12349224 - 12349170
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||| |||| ||||    
T  12349224 gacaacttgtacgtgggacataaagttgtgctgtggtttggtgagagacaaaaat 12349170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 31883075 - 31883021
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||| ||| ||||    
T  31883075 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgaggcacaaaaat 31883021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 44116971 - 44117025
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||  |||||||| ||||||||| ||||    
T  44116971 gacaacttgtacgtgggacaaaaagttgtgcagtggtttgatgagggacaaaaat 44117025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 51296613 - 51296667
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||||||| ||||    
T  51296613 gacaacttgtacttaggacaaaaaattgtgttgtggtttggtgagggacaaaaat 51296667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 54622849 - 54622795
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || |||||||||||||||||||| ||||| |||| ||||    
T  54622849 gacaacttgtacgtgggataaaaagttgtgttgtggtttcgtgagcgacaaaaat 54622795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 5442323 - 5442372
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||| |||||||||| |||||||||||||| |||| ||||||||||||||    
T  5442323 gacagcttgtacgtgggacaaaaagttgtgctgtgatttggtgagggaca 5442372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 3695345 - 3695301
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag 359  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||    
T  3695345 gacaacttgtacgtgggacaaaaggttgtgatgtggtttggtgag 3695301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 14155513 - 14155466
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    |||||||||||| ||||||||||||||||||| || ||| ||||||||    
T  14155513 gacaacttgtacttgagacaaaaagttgtgttatgatttagtgaggga 14155466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 358
Target Start/End: Original strand, 23322173 - 23322216
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 358  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||    
T  23322173 gacaacttgtacgagagataaaaagttgtgttgtggtttagtga 23322216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 42547420 - 42547385
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    ||||||||||||||||||||||||||||||| ||||    
T  42547420 aacttgtacgtgagacaaaaagttgtgttgtagttt 42547385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 20255077 - 20255130
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| ||||| |||||||| ||||||||||||||||||| ||||    
T  20255077 gacaacttgta-gtgggacaagaagttgtgctgtggtttggtgagggacaaaaat 20255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 26282440 - 26282386
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| |||||||||||||| ||||||||| |||| |||| ||||    
T  26282440 gacaacttatacgtgggacaaaaagttgtgctgtggtttgatgagagacaaaaat 26282386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 50386509 - 50386455
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||| ||||||||| ||||| ||| ||||    
T  50386509 gacaacttgtacgtaggacaaaaagttgtgctgtggtttgttgaggcacaaaaat 50386455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 24721517 - 24721562
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagg 360  Q
    ||||||||||| ||| || ||||||||||||||||||||| |||||    
T  24721517 gacaacttgtatgtgggataaaaagttgtgttgtggtttgttgagg 24721562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 22484796 - 22484756
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 355  Q
    |||||||| |||||| |||||||||||||||||| ||||||    
T  22484796 gacaacttatacgtgggacaaaaagttgtgttgtagtttgg 22484756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 44000296 - 44000340
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    |||||||||||| |||||||| ||||| |||||||| ||||||||    
T  44000296 aacttgtacgtgggacaaaaaattgtgatgtggtttagtgaggga 44000340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 1708 - 1654
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  1708 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 1654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 12601 - 12547
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  12601 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 12547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 18119 - 18065
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  18119 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 18065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 15203 - 15257
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15203 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgggggacaaaaat 15257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 1870170 - 1870224
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  1870170 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 1870224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 21784906 - 21784960
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21784906 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 21784960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 32873829 - 32873775
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  32873829 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaaggacaaaaat 32873775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 10932617 - 10932563
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  10932617 gacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaat 10932563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 11321945 - 11321891
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  11321945 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 11321891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 18386560 - 18386614
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  18386560 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 18386614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 23349351 - 23349297
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  23349351 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 23349297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 26910470 - 26910416
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  26910470 gacaacttgtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaat 26910416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 26994285 - 26994231
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  26994285 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 26994231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 36769629 - 36769575
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  36769629 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 36769575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 41211260 - 41211206
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  41211260 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 41211206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 41665635 - 41665581
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  41665635 gacaacttgtacgtgagacaaaaagttgtgatgtggtttggcgagggacaaaaat 41665581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 43158746 - 43158692
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  43158746 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaat 43158692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 43189302 - 43189248
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  43189302 gacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 43189248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 44748730 - 44748784
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  44748730 gacaacttgtacgtgggacaaaaagttgtattgtggtttggtgagggacaaaaat 44748784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 47316758 - 47316704
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  47316758 gacaacttgcatgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 47316704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 47953225 - 47953279
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  47953225 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 47953279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 329507 - 329559
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  329507 caacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 329559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 46633732 - 46633779
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  46633732 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggga 46633779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 1363671 - 1363725
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  1363671 gacaacctgtacgtgagacaaaaagttgtgatgtggtttgatgagggacaaaaat 1363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 26371869 - 26371815
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||    
T  26371869 gacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 26371815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 26652901 - 26652955
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  26652901 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaat 26652955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 34295464 - 34295410
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  34295464 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaat 34295410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 34519543 - 34519597
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||| ||||    
T  34519543 gacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaat 34519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 40753190 - 40753244
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||    
T  40753190 gacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 40753244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 43213985 - 43213931
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||    
T  43213985 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaat 43213931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 10482188 - 10482127
Alignment:
Q  19 aaattgttgcttgaattctaataatttgctgtaaaattaaaaaggtgagcaaaaccaaaagg 80  Q
    |||||| ||| | ||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  10482188 aaattgatgcataaattctaataatttgttgtaaaatgaaaaaggtgaacaaaaccaaaagg 10482127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 30849305 - 30849252
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||| ||||    
T  30849305 acaacttgtatatgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 30849252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 30599062 - 30599014
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  30599062 ttgtacttgagacaaaaagttgtgttgtggtttgatgagggacaaaaat 30599014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 369
Target Start/End: Complemental strand, 3922760 - 3922709
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||| ||||    
T  3922760 aacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaat 3922709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 29661361 - 29661412
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||| ||||    
T  29661361 aacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaat 29661412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 11250668 - 11250706
Alignment:
Q  331 gacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  11250668 gacaaaaagttgtgttgtggtttggtgagggacaaaaat 11250706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 18470719 - 18470773
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||| || |||||||||||||| |||| ||||    
T  18470719 gacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagagacaaaaat 18470773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 22724591 - 22724537
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||| ||||||| | ||||||||||||||||||| ||||    
T  22724591 gacaacttgtacgtgggacataaagttgcgctgtggtttggtgagggacaaaaat 22724537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 38301378 - 38301431
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||| ||||    
T  38301378 gacaacttgt-cgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaat 38301431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 46408924 - 46408978
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||  |||||||||||||| ||||||||||||||||||| ||||    
T  46408924 gacaacttgtatgtcggacaaaaagttgtgctgtggtttggtgagggacaaaaat 46408978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 16963174 - 16963227
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| ||||||||||||| |||||||||| | ||||||| ||||    
T  16963174 acaacttgtacgtgggacaaaaagttgtattgtggtttgataagggacaaaaat 16963227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 17237117 - 17237154
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtga 358  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17237117 ttgtacgtgagacaaaaagttgtgttgtggtttagtga 17237154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 48699433 - 48699482
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||||||||    
T  48699433 gacaacttgtacgtggaacaaatagttgtgttgtggtttagtgagggaca 48699482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 35645482 - 35645530
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggac 363  Q
    ||||||||||||||  || |||||||||||||||||||| |||||||||    
T  35645482 gacaacttgtacgtacgataaaaagttgtgttgtggtttagtgagggac 35645530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 358
Target Start/End: Original strand, 42332094 - 42332137
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 358  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||    
T  42332094 gacaatttgtatgtgagacaaaaagttgtgatgtggtttggtga 42332137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 3892086 - 3892032
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||| |||| ||||    
T  3892086 gacaacttgtacgtaggacaaaaagttgtgctgtgatttggtgagagacaaaaat 3892032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 22631773 - 22631827
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||   |||||||||| |||||||||||||||| ||||| ||||    
T  22631773 gacaacttgtacgtataacaaaaagttatgttgtggtttggtgaaggacaaaaat 22631827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 34117487 - 34117541
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| ||  ||||||| ||||| ||||||||||||||||||| ||||    
T  34117487 gacaacttgtacatggaacaaaaaattgtgatgtggtttggtgagggacaaaaat 34117541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 43368236 - 43368290
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||| ||||||||| ||||| ||| ||||    
T  43368236 gacaacttgtacgtaggacaaaaagttgtgctgtggtttgctgaggcacaaaaat 43368290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 9913560 - 9913609
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||| |||||||| || ||||||||||| |||||||||||||| ||||    
T  9913560 gacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtgagcgaca 9913609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 9927248 - 9927297
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||| |||||||| || ||||||||||| |||||||||||||| ||||    
T  9927248 gacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtgagcgaca 9927297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 20127325 - 20127378
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||| ||| ||||    
T  20127325 acaaattgtacgtgggacaaaaagttgtgatgtggtttgctgaggaacaaaaat 20127378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 11822268 - 11822312
Alignment:
Q  325 acgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||||||||||||||||| |||| ||||| ||||    
T  11822268 acgtgggacaaaaagttgtgttgtggtttagtgaaggacaaaaat 11822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 22724091 - 22724043
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||||| || ||||||||| |||||||||||| || |||||    
T  22724091 acaacttgtacgtgggataaaaagttgcgttgtggtttggcgatggaca 22724043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 7208295 - 7208241
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7208295 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 7208241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 32528746 - 32528800
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  32528746 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 32528800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 39918538 - 39918592
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  39918538 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 39918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 41790527 - 41790473
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41790527 gacaatttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 41790473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 6284363 - 6284314
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6284363 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggaca 6284314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 4689761 - 4689709
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  4689761 caacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 4689709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 369
Target Start/End: Complemental strand, 700663 - 700612
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  700663 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaaaaat 700612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 31770656 - 31770609
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31770656 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaggga 31770609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 553428 - 553482
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  553428 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaat 553482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 2351711 - 2351765
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  2351711 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2351765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 4818205 - 4818151
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  4818205 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 4818151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 5571709 - 5571655
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  5571709 gacaacttgtacgttggacaaaaagttgtgttgtggtttggtgagggacaaaaat 5571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 7523203 - 7523257
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  7523203 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 7523257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 8136868 - 8136922
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  8136868 gacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaat 8136922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 21739226 - 21739172
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  21739226 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 21739172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 22493484 - 22493430
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  22493484 gacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgagggacaaaaat 22493430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 28090585 - 28090531
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  28090585 gacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaat 28090531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 31644477 - 31644531
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  31644477 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 31644531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 39788224 - 39788278
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  39788224 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 39788278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 3735388 - 3735442
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  3735388 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgatggacaaaaat 3735442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 323 - 369
Target Start/End: Original strand, 5673178 - 5673224
Alignment:
Q  323 gtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  5673178 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 5673224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 11963372 - 11963426
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||    
T  11963372 gacaacttgcacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 11963426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 22432374 - 22432320
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||    
T  22432374 gacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggacaaaaat 22432320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 24036261 - 24036315
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||||    
T  24036261 gacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaat 24036315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 27839138 - 27839084
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||| ||||    
T  27839138 gacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaat 27839084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 34794918 - 34794972
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||    
T  34794918 gacaacttatacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 34794972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 35701308 - 35701362
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||| ||||    
T  35701308 gacaacttgtacgtggaacaaaaagttatgttgtggtttggtgagggacaaaaat 35701362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 40182495 - 40182549
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  40182495 gacaacttgtacatgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 40182549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 7770342 - 7770290
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  7770342 caacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaat 7770290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 29241411 - 29241463
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||||| ||||    
T  29241411 caacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaat 29241463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 18470493 - 18470439
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||| ||||||||||| ||||||| ||||    
T  18470493 gacaacttgtacgtgggataaaaagttgtgctgtggtttggtaagggacaaaaat 18470439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 23091369 - 23091315
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| || ||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  23091369 gacaatttatacgtgagacaaaaagttgtgttgtggtttgatgacggacaaaaat 23091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 24181689 - 24181635
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| ||||||||||| || ||||||||||||||||||| ||||    
T  24181689 gacaacttatacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaat 24181635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 31880141 - 31880087
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||| ||||||| ||||||||||||||||||| ||||    
T  31880141 gacaacttgtacgtaggacaaatagttgtgatgtggtttggtgagggacaaaaat 31880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 40489368 - 40489422
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||||||||| ||||    
T  40489368 gacaacttgtatgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 40489422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 41459620 - 41459674
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||  ||||||||||||| | ||||||||||||||||| ||||    
T  41459620 gacaacttgtacgtggaacaaaaagttgtgctctggtttggtgagggacaaaaat 41459674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 32093040 - 32093001
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtgagg 360  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  32093040 ttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 32093001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 5598511 - 5598565
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| |||||||||||||||||||||||| ||| ||||| ||| ||||| ||||    
T  5598511 gacaagttgtacgtgagacaaaaagttgtgctgttgtttgatgaaggacaaaaat 5598565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 353
Target Start/End: Complemental strand, 7725874 - 7725836
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  7725874 gacaacttatacgtgggacaaaaagttgtgttgtggttt 7725836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 8561047 - 8560993
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| ||  ||||||||||||| ||||||||||||||| ||| ||||    
T  8561047 gacaacttgtacctggaacaaaaagttgtgatgtggtttggtgaggaacaaaaat 8560993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 11090933 - 11090887
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggg 361  Q
    |||||| |||||||||||||||||||||||| |||| || |||||||    
T  11090933 gacaacgtgtacgtgagacaaaaagttgtgtcgtggcttagtgaggg 11090887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 12600920 - 12600974
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  12600920 gacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaaaat 12600974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 23521914 - 23521968
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  23521914 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 23521968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 38812554 - 38812608
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  38812554 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 38812608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 55065385 - 55065331
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  55065385 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 55065331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 21202773 - 21202822
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21202773 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggaca 21202822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 3649670 - 3649724
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  3649670 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 3649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 6776612 - 6776666
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  6776612 gacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 6776666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 20802583 - 20802529
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  20802583 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 20802529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 21580060 - 21580114
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  21580060 gacaatttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaat 21580114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 22318436 - 22318382
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22318436 gacaacttctacgtaagacaaaaagttgtgttgtggtttggtgagggacaaaaat 22318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 24002373 - 24002427
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  24002373 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 24002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 28115286 - 28115340
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  28115286 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 28115340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 29785589 - 29785535
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  29785589 gacaacttgtacgtgggacaaaaagctgtgttgtggtttggtgagggacaaaaat 29785535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 33177084 - 33177030
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  33177084 gacaacttgtgcgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 33177030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 33552894 - 33552840
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  33552894 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 33552840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 38486309 - 38486255
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  38486309 gacaacttgtacgttagacaaaaagttgtgctgtggtttggtgagggacaaaaat 38486255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 43641133 - 43641187
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  43641133 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 43641187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 47642543 - 47642489
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  47642543 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaat 47642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 49152152 - 49152098
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  49152152 gacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 49152098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 50727965 - 50727911
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  50727965 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaat 50727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 50735979 - 50735925
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  50735979 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaat 50735925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 52319357 - 52319411
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  52319357 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 52319411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 52949754 - 52949808
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  52949754 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaat 52949808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 56154655 - 56154709
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  56154655 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 56154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 44324393 - 44324340
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  44324393 acaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 44324340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 16320555 - 16320607
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  16320555 caacctgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 16320607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 358
Target Start/End: Complemental strand, 50729594 - 50729551
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 358  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  50729594 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtga 50729551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 1231345 - 1231399
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||    
T  1231345 gacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaat 1231399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 2630003 - 2629949
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| | |||| |||||||||||| ||||    
T  2630003 gacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaat 2629949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 2725184 - 2725131
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  2725184 gacaacttgtacgtg-gacaaaaagttgtgatgtggtttggtgagggacaaaaat 2725131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 7555009 - 7554955
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||| ||||    
T  7555009 gacaacttgtacgtgagacaaaaagttgtgttatggtttagtgaaggacaaaaat 7554955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 9512392 - 9512338
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  9512392 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaat 9512338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 20694405 - 20694459
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||    
T  20694405 gacaacttgtacgttggacaaaaagttgcgttgtggtttggtgagggacaaaaat 20694459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 25978663 - 25978609
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||| ||||    
T  25978663 gacaacttgtaagtgagacaaaaagttgtgatatggtttggtgagggacaaaaat 25978609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 32181297 - 32181351
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||    
T  32181297 gacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 32181351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 36743740 - 36743686
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  36743740 gacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaat 36743686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 37695593 - 37695539
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  37695593 gacaacctgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaat 37695539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 37865787 - 37865841
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||||| ||||    
T  37865787 gacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaat 37865841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 41711881 - 41711935
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  41711881 gacaacctgtacgtgagacaaaaagttgtactgtggtttggtgagggacaaaaat 41711935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 44649216 - 44649162
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||| ||||    
T  44649216 gacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaat 44649162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 46680562 - 46680508
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  46680562 gacaatttgtacgtgagacaaaaagttgtgctgtggtttggtaagggacaaaaat 46680508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 50186562 - 50186616
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||||||| ||||    
T  50186562 gacaacttgtatgtgggataaaaagttgtgttgtggtttggtgagggacaaaaat 50186616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 24210353 - 24210402
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  24210353 gacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggaca 24210402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 37931955 - 37932008
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||| ||||    
T  37931955 acaacttgtatgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaat 37932008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 43739495 - 43739544
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  43739495 gacaacttgtatgtgggacaaaatgttgtgttgtggtttggtgagggaca 43739544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 55593919 - 55593967
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggac 363  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  55593919 gacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggac 55593967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 23327952 - 23328007
Alignment:
Q  315 gacaacttgtacgtgagacaaaa-agttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  23327952 gacaacttgtacgtgggacaaaaaagttgtgttgtggtttgctgagggacaaaaat 23328007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 53200696 - 53200641
Alignment:
Q  315 gacaacttgtacgtgagacaaaaa-gttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||||    
T  53200696 gacaacttgtacgtgggacaaaaaagttgtgctgtggtttggtgagggacaaaaat 53200641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 4325825 - 4325879
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||| |||| ||||    
T  4325825 gacaacttgtacgtgggacaaaaagttgtgttgcggttttgtgagagacaaaaat 4325879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 26083373 - 26083427
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| ||||||||||| || ||||||||||||||||||| ||||    
T  26083373 gacaacttgtaagtgggacaaaaagttatgctgtggtttggtgagggacaaaaat 26083427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 36497251 - 36497305
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||  |||||||||||||| ||||||||||||||||||| ||||    
T  36497251 gacaacttgtatgttggacaaaaagttgtgatgtggtttggtgagggacaaaaat 36497305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 36885966 - 36886020
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||| || ||||||||||| ||||||||||||||||||| ||||    
T  36885966 gacaatttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaat 36886020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 39078695 - 39078749
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||| ||||||  |||||||| ||||||||||||||||||||||||| ||||    
T  39078695 gacaactcgtacgtaggacaaaaatttgtgttgtggtttggtgagggacaaaaat 39078749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 47361449 - 47361411
Alignment:
Q  331 gacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  47361449 gacaaaaagttgtgttgtggtttggtgagggacaaaaat 47361411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 332 - 369
Target Start/End: Original strand, 7001903 - 7001940
Alignment:
Q  332 acaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7001903 acaaaaagttgtgttgtggtttggtgagggacaaaaat 7001940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 9947966 - 9948010
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||    
T  9947966 aacttgtacgtgagacaaaaagttgtaatgtggtttagtgaggga 9948010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 42772832 - 42772876
Alignment:
Q  325 acgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||    
T  42772832 acgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaat 42772876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 20518074 - 20518020
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||| ||||| || |||| |||||||||||||| ||||    
T  20518074 gacaacttgtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaat 20518020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 30942822 - 30942876
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| || ||||| ||||| ||||||||||||||||||||| |||| ||||    
T  30942822 gacaacttatatgtgaggcaaaatgttgtgttgtggtttggtgagagacagaaat 30942876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 353
Target Start/End: Complemental strand, 45577744 - 45577706
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  45577744 gacaacttgcacgtgggacaaaaagttgtgttgtggttt 45577706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 54543024 - 54543077
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||| ||||    
T  54543024 gacaacttgtacgtgggacaaaa-gttgtgctatggtttggtgagggacaaaaat 54543077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 9807190 - 9807235
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagg 360  Q
    ||||||||||||||  |||||||||||||  |||||||||||||||    
T  9807190 gacaacttgtacgtaggacaaaaagttgtactgtggtttggtgagg 9807235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 52673854 - 52673899
Alignment:
Q  324 tacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||| ||||| |||||||||| ||||    
T  52673854 tacgtgagacaaaaaattgtgttgaggtttagtgagggacaaaaat 52673899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 38520534 - 38520582
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||| |||| |||||||| || || |||||||||||||||||||    
T  38520534 acaacttgtgcgtgggacaaaaaattatgctgtggtttggtgagggaca 38520582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 7258928 - 7258982
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7258928 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 7258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 7761632 - 7761578
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7761632 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 7761578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 9732989 - 9732935
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  9732989 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 9732935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 40832524 - 40832474
Alignment:
Q  319 acttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40832524 acttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 40832474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 16104305 - 16104359
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  16104305 gacaatttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaat 16104359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 16177942 - 16177888
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||| ||||    
T  16177942 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaaaaat 16177888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 17540746 - 17540800
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  17540746 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 17540800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 19513748 - 19513694
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  19513748 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 19513694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 35114816 - 35114870
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  35114816 gacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaat 35114870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 37003927 - 37003873
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  37003927 gacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 37003873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 37308686 - 37308740
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  37308686 gacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 37308740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 41366169 - 41366115
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  41366169 gacaacttgtatgtgagacaaaaaattgtgttgtggtttggtgagggacaaaaat 41366115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 42706390 - 42706444
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  42706390 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 42706444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 44284660 - 44284714
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  44284660 gacaacttgtacgtgagacaaaaagttgtgctgtggtttagtgagggacaaaaat 44284714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 3913519 - 3913470
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  3913519 gacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggaca 3913470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 9717255 - 9717304
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  9717255 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggaca 9717304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 33889274 - 33889321
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  33889274 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgaggga 33889321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 1247178 - 1247232
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||    
T  1247178 gacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaat 1247232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 2645145 - 2645091
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||    
T  2645145 gacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2645091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 5278893 - 5278839
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  5278893 gacaacttgtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaat 5278839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 6896199 - 6896253
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  6896199 gacaacttgtacgtgggacaaaaagttgtgctgttgtttggtgagggacaaaaat 6896253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 12939359 - 12939305
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||    
T  12939359 gacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggacaaaaat 12939305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 18685867 - 18685921
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||    
T  18685867 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaat 18685921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 26418954 - 26419008
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||    
T  26418954 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaat 26419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 26796259 - 26796313
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||| |||||| ||| |||||||||||||||    
T  26796259 gacaacttgtacgtgtgacaaaaagttgcgttgtgctttagtgagggacacaaat 26796313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 28824616 - 28824562
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  28824616 gacaacttgcacgtgagataaaaagttgtgatgtggtttggtgagggacaaaaat 28824562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 32497946 - 32498000
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||    
T  32497946 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgaggtacaaaaat 32498000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 38623363 - 38623309
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||    
T  38623363 gacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 38623309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 40692328 - 40692382
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||    
T  40692328 gacaacttgtacgtgggacaaaaagttgttctgtggtttggtgagggacaaaaat 40692382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 4641548 - 4641601
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||| ||||    
T  4641548 acaacttgtatgtgagacaaaaagttgtgctgtggtttggtgagagacaaaaat 4641601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 30326390 - 30326341
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  30326390 gacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagagaca 30326341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 369
Target Start/End: Complemental strand, 30798545 - 30798494
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||| ||||    
T  30798545 aacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaat 30798494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 38993130 - 38993091
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttg 354  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  38993130 gacaacttgtacgtgggacaaaaagttgtgttgtggtttg 38993091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 10399929 - 10399875
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||    
T  10399929 gacaacttatacatgagacaaaaagttgtgttgtggtttagtgaaggacaaaaat 10399875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 11114903 - 11114957
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||| ||| ||||    
T  11114903 gacaacttgtgcgtgggacaaaaagttgtgatgtggtttggtgaggaacaaaaat 11114957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 12672533 - 12672479
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || || ||||| ||||||||||||||||||||||||| ||||    
T  12672533 gacaacttgtacttgggataaaaacttgtgttgtggtttggtgagggacaaaaat 12672479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 26981768 - 26981714
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||   |||||||||| |||||||||||||||||||||| ||||    
T  26981768 gacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaat 26981714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 33366641 - 33366695
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||| ||| ||||    
T  33366641 gacaacttgtatgtgggagaaaaagttgtgttgtggtttggtgaggaacaaaaat 33366695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 361
Target Start/End: Original strand, 34338841 - 34338887
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggg 361  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  34338841 gacaacttgtgcgtgggacaaaaagttgtgctgtggtttggtgaggg 34338887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 18127044 - 18127009
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    ||||||||| ||||||||||||||||||||||||||    
T  18127044 aacttgtacttgagacaaaaagttgtgttgtggttt 18127009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 334 - 369
Target Start/End: Complemental strand, 27462842 - 27462807
Alignment:
Q  334 aaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27462842 aaaaagttgtgttgtggtttggtgagggacaaaaat 27462807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 334 - 369
Target Start/End: Complemental strand, 32766544 - 32766509
Alignment:
Q  334 aaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32766544 aaaaagttgtgttgtggtttggtgagggacaaaaat 32766509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 45463162 - 45463115
Alignment:
Q  322 tgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||  ||||||||||||||||||||||||||||| |||| ||||    
T  45463162 tgtacgtatgacaaaaagttgtgttgtggtttggtgagtgacaaaaat 45463115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 2086103 - 2086157
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||| ||||||||||||  ||||||||||  ||||||| ||||    
T  2086103 gacaacttgtacgtgaaacaaaaagttgtactgtggtttgggtagggacaaaaat 2086157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 42365608 - 42365662
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| ||||| | ||||||||||||||||||||| ||| ||||| ||||    
T  42365608 gacaacttgtccgtgatataaaaagttgtgttgtggtttgatgaaggacaaaaat 42365662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 369
Target Start/End: Original strand, 8112348 - 8112385
Alignment:
Q  332 acaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  8112348 acaaaaagttgtgttgtggtttggtgagagacaaaaat 8112385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 38786588 - 38786544
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgag 359  Q
    |||||||| |||||||||||||| |||||||| |||||| |||||    
T  38786588 gacaacttatacgtgagacaaaatgttgtgttttggtttagtgag 38786544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 1351569 - 1351515
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  1351569 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 1351515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 6029435 - 6029381
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  6029435 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 6029381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 13994209 - 13994155
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13994209 gacaacttgtacatgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 13994155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 16437402 - 16437456
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  16437402 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 16437456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 41967983 - 41967929
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  41967983 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaat 41967929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 45491009 - 45490955
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  45491009 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 45490955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 31004172 - 31004221
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31004172 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggaca 31004221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 51264536 - 51264589
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  51264536 acaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 51264589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 844858 - 844804
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  844858 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 844804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 1601213 - 1601267
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  1601213 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 1601267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 6711180 - 6711126
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  6711180 gacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaat 6711126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 16386894 - 16386948
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  16386894 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 16386948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 17887988 - 17888042
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  17887988 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaat 17888042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 26764929 - 26764875
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  26764929 gacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaat 26764875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 28340437 - 28340383
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  28340437 gacaacttgtacgtgagacaaaaagttgtgctgtggtttgatgagggacaaaaat 28340383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 41972951 - 41973005
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  41972951 gacaacttgtacgtgagacaaaaagttgtagtgtggtttggtgagggacaaaaat 41973005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 42705372 - 42705318
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  42705372 gacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaat 42705318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 44738176 - 44738122
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  44738176 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 44738122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 50382537 - 50382483
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  50382537 gacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaat 50382483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 25539896 - 25539949
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  25539896 acaacttgtaggtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 25539949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 7183958 - 7184012
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||    
T  7183958 gacaacttgtacgtaggacaaaaagttgtgttgtggtttggtaagggacaaaaat 7184012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 12890278 - 12890332
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  12890278 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaat 12890332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 16451167 - 16451221
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||    
T  16451167 gacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaat 16451221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 16476289 - 16476235
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||    
T  16476289 gacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaat 16476235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 30105814 - 30105760
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  30105814 gacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaat 30105760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 32270393 - 32270447
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||| ||||    
T  32270393 gacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 32270447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 35387445 - 35387391
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||    
T  35387445 gacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaat 35387391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 38663172 - 38663226
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  38663172 gacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaat 38663226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 42510565 - 42510619
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||    
T  42510565 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaat 42510619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 50540384 - 50540438
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||    
T  50540384 gacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaaaat 50540438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 32289477 - 32289424
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||    
T  32289477 acaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaat 32289424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 45658862 - 45658915
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||    
T  45658862 acaacttgtaggtgggacaaaaagttgtgttgtggtttggtgagcgacaaaaat 45658915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 24339773 - 24339718
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtgg-tttggtgagggacacaaat 369  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  24339773 gacaacttgtacgtgggaaaaaaagttgtgttgtggttttggtgagggacaaaaat 24339718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 16704766 - 16704820
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| ||||||| ||||    
T  16704766 gacaacttgtatgtgagacaaagagttgtgatgtggtttggtaagggacaaaaat 16704820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 26118349 - 26118295
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| |||||||||||||| |||| |||||||||||||| ||||    
T  26118349 gacaacttttacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 26118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 39281934 - 39281988
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||||||| ||||    
T  39281934 gacaacttgtacgtaggacaaaaagttgtactgtggtttggtgagggacaaaaat 39281988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 570426 - 570482
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtg--ttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||| ||||||||||||||||  |||||||||||||||||||| ||||    
T  570426 gacaacttatacgcgagacaaaaagttgtgcattgtggtttggtgagggacaaaaat 570482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 5109768 - 5109817
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  5109768 gacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggaca 5109817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 11772765 - 11772712
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||| ||||| ||| |||||||||||||| ||||||||||||||||||| ||||    
T  11772765 acaatttgtaggtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 11772712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 39792847 - 39792896
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||| |||||||||| |||| |||||||||||||||||||||| |||||    
T  39792847 gacaatttgtacgtgaaacaacaagttgtgttgtggtttggtgaaggaca 39792896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 17327777 - 17327729
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||| ||||||||||||||||| |||| |||||||||||||| ||||    
T  17327777 ttgtacatgagacaaaaagttgtgctgtgatttggtgagggacaaaaat 17327729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 34283947 - 34283912
Alignment:
Q  318 aacttgtacgtgagacaaaaagttgtgttgtggttt 353  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34283947 aacttgtacgtgagataaaaagttgtgttgtggttt 34283912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 6144120 - 6144066
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| || |||||||||||||||||||||  |||||||| ||||    
T  6144120 gacaacttctacgtgggagaaaaagttgtgttgtggtttgccgagggacaaaaat 6144066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 38087130 - 38087076
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||| |||||||| |||| ||||| ||||    
T  38087130 gacaacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaat 38087076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 42512904 - 42512850
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||| ||||||||  |||||||||||||||||||||||| ||||| ||| ||||    
T  42512904 gacaatttgtacgtaggacaaaaagttgtgttgtggtttgctgaggcacaaaaat 42512850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 50304691 - 50304745
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||  |||||||||||||||||||| |||||||||  |||||||| ||||    
T  50304691 gacaacttaaacgtgagacaaaaagttgtgctgtggtttgcagagggacaaaaat 50304745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 2761684 - 2761643
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtgaggga 362  Q
    |||||| ||||||||||| |||||||||||||| ||||||||    
T  2761684 ttgtacttgagacaaaaaattgtgttgtggtttagtgaggga 2761643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 23799670 - 23799617
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||  ||||| || ||||||||||| ||||||||||||||||||| ||||    
T  23799670 acaacttaaacgtgcgataaaaagttgtgctgtggtttggtgagggacaaaaat 23799617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 26733595 - 26733644
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| ||||||    
T  26733595 gacaacttgtacatgaggcaaaaagttgtgttatggtttagtgggggaca 26733644  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 10384413 - 10384461
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| |||||||||||||| |||||||| |||| ||||| ||||    
T  10384413 ttgtacgtgggacaaaaagttgtgctgtggtttagtgaaggacaaaaat 10384461  T

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Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 43009 - 42961
Alignment:
Q  321 ttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43009 ttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacacaaat 42961  T

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Target: scaffold0729 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 4644 - 4590
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  4644 gacaacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 4590  T

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Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 15446 - 15392
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  15446 gacaacttgtacatgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 15392  T

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Target: scaffold0208 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 2403 - 2349
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  2403 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 2349  T

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Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 101980 - 102034
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  101980 gacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 102034  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 373029 - 372975
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  373029 gacaacttgtacgtgggacaaaaagttgtgttatggtttggtgagggacaaaaat 372975  T

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Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 19155 - 19101
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||    
T  19155 gacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaat 19101  T

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Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 23606 - 23660
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  23606 gacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaat 23660  T

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Target: scaffold0155 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 33608 - 33560
Alignment:
Q  316 acaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  33608 acaatttgtacgtgggacaaaaagttgtgttgtggtttgatgagggaca 33560  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 5503 - 5451
Alignment:
Q  317 caacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||    
T  5503 caacttgtatgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 5451  T

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Target: scaffold0280 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 13752 - 13698
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||| ||| |||||||||||||  ||||||||||||||||||| ||||    
T  13752 gacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 13698  T

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Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 51470 - 51523
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacacaaat 369  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||    
T  51470 gacaacttgtacgtgggacaaaaagttgtgctgtggttt-gtgagggacaaaaat 51523  T

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Target: scaffold0957 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 2560 - 2512
Alignment:
Q  315 gacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggaca 364  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  2560 gacaacttgtacgtgagacaata-gttgtgttgtggtttggttagggaca 2512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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