View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1802_low_39 (Length: 259)

Name: NF1802_low_39
Description: NF1802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1802_low_39
NF1802_low_39
[»] chr3 (3 HSPs)
chr3 (1-245)||(8341824-8342068)
chr3 (127-233)||(8333037-8333143)
chr3 (1-185)||(26727420-26727604)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-233)||(29813-30045)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-233)||(168747-168979)
scaffold0017 (1-242)||(173756-173997)
[»] chr1 (6 HSPs)
chr1 (1-242)||(44144742-44144984)
chr1 (1-185)||(44785757-44785941)
chr1 (1-139)||(44611648-44611786)
chr1 (3-185)||(35898942-35899124)
chr1 (1-242)||(11544682-11544927)
chr1 (134-242)||(44612085-44612193)
[»] chr2 (2 HSPs)
chr2 (5-233)||(29228546-29228774)
chr2 (5-233)||(29341845-29342073)
[»] chr5 (9 HSPs)
chr5 (148-230)||(29508115-29508197)
chr5 (145-233)||(29507536-29507624)
chr5 (145-230)||(29507611-29507696)
chr5 (145-230)||(29507683-29507768)
chr5 (145-183)||(29507874-29507912)
chr5 (145-183)||(29507946-29507984)
chr5 (145-183)||(29508090-29508128)
chr5 (145-230)||(29507755-29507840)
chr5 (145-230)||(29507971-29508056)


Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 8341824 - 8342068
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8341824 tcaataactgagttgtaacatctaacatatcttgacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 8341923  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 200  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  8341924 accttgatctctcaaacggtggttatgagggaaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagtcttaatgatcttgt 8342023  T
Q  201 tggaacaatccctttccaactcggaaatctttcgttattgcaatc 245  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  8342024 tggtacaatccctttccaactcggaaatctttcgttattgcaatc 8342068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 8333037 - 8333143
Alignment:
Q  127 gaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaa 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||    
T  8333037 gagggaaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagacttaatgatcttgttggaaaaatccctttccaactcgaaa 8333136  T
Q  227 atctttc 233  Q
    |||||||    
T  8333137 atctttc 8333143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 26727420 - 26727604
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||  | ||| ||||| || ||||| |||||||| || |||| ||| |||||||    
T  26727420 tcaataactgagttgcaacatctaacatatctagaccttagttcattgatgattagaggtcatatcccaaattttattggctccttcatcaatttacgat 26727519  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 185  Q
    ||||| ||||||||||||    || | | | |||||||||| |||||||||| || |||||||| |||||||||||| |||||||    
T  26727520 accttaatctctcaaatgccttttttaatgagaagattccttctcaacttggaaaactctcacagttgcaacaccttgatctcag 26727604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 30045 - 29813
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||  ||||||| |||| ||    
T  30045 tcaataactgagttgcaacatctaaaatatcttgacctcagatatttgaataccagtggtcaaatcccaaaatttattggatccatcagcaaattacaat 29946  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 200  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||| |||| ||    ||||||||       
T  29945 accttgatctctcatttggtggttatgatgggaagattcctattcaacttgggaatctatcacaattgcgacatcttgatcttagcaggaatgatctgaa 29846  T
Q  201 tggaacaatccctttccaactcggaaatctttc 233  Q
    ||||  |||||||||||||||||||||||||||    
T  29845 tggagaaatccctttccaactcggaaatctttc 29813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 168747 - 168979
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||  ||||||| |||| ||    
T  168747 tcaataactgagttgcaacatctaaaatatcttgacctcagatatttgaataccagtggtcaaatcccaaaatttattggatccatcagcaaattacaat 168846  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 200  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||| |||| ||    ||||||||       
T  168847 accttgatctctcatttggtggttatgatgggaagattcctattcaacttgggaatctatcacaattgcgacatcttgatcttagcaggaatgatctgaa 168946  T
Q  201 tggaacaatccctttccaactcggaaatctttc 233  Q
    ||||  |||||||||||||||||||||||||||    
T  168947 tggagaaatccctttccaactcggaaatctttc 168979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 173756 - 173997
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||| || |||||||| || ||      
T  173756 tcaataactgagttacaaaatctaacatatttagacctcagttatttgaatactagtagtcaaatctcaaaatttattggctccttcagcaagttgcggc 173855  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 200  Q
    |||||||||| |||||||||  |||||| |||||| |||||  | ||||||| ||||| |||||||||  | ||||| |||| || |  ||||| ||  |    
T  173856 accttgatctgtcaaatggtcattatgatgggaaggttccttttgaacttggaaatctatcacaattgtgataccttgatcttagctacaatgaactcat 173955  T
Q  201 tggaacaatccctttccaactcggaaatctttcgttattgca 242  Q
    ||||  ||||||||||||||||||||||||||| || |||||    
T  173956 tggagaaatccctttccaactcggaaatctttcattgttgca 173997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 44144742 - 44144984
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    |||||||||| | |||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||||||| || |||||||| ||||||     
T  44144742 tcaataactgtgctgcaacatctaacacatctagacctaagttatttgaatactggtggtcaaatcccaaaatttattggctccttcagcaagttacgac 44144841  T
Q  101 acc-ttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttg 199  Q
    ||| |||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||||| || | || |  ||||| ||      
T  44144842 acctttgatctctcagttggtggttatgatgggaagattcctgctcaacttgggaatctctcacgattgcgacaccttgattttagctacaatgaactca 44144941  T
Q  200 ttggaacaatccctttccaactcggaaatctttcgttattgca 242  Q
    |||||  ||||||||||||||||||||||||||| ||||||||    
T  44144942 ttggagaaatccctttccaactcggaaatctttcattattgca 44144984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 44785941 - 44785757
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    |||||||||||| ||| |||||||| |||||||||||||||| |||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  44785941 tcaataactgagctgcgacatctaaaatatctagacctcagtcatttgattactaatgatcaaattccaaaatttattggatccttcagcaacttacgat 44785842  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 185  Q
    ||||||| ||||||  ||||||||| |  || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  44785841 accttgacctctcagttggtggttacggtggaaagattcctactcaacttgggaatctctcacaattgcgacaccttgatctcag 44785757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 44611648 - 44611786
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||| || ||| |||||||| |||    
T  44611648 tcaataactgagttgcaacatctaacatatctaaacctcagttatctgaatactagtggtcaaatcccaaaatttattggctccttctgcaacttaagat 44611747  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattc 139  Q
    ||||||||||||||||| |||||| ||| ||||||||||    
T  44611748 accttgatctctcaaatagtggttttgatgggaagattc 44611786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 35898942 - 35899124
Alignment:
Q  3 aataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatac 102  Q
    ||||||||| ||||||||||| |||||| |||||||  ||| ||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||    
T  35898942 aataactgaattgcaacatcttacatatttagaccttggttttttgaatactagtggtcaaatcccaaaatttattggctccttcagcaacttgcgatac 35899041  T
Q  103 cttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 185  Q
     |||||||||||||| ||||||  || |||||||||||| |||| ||| |||||||||||   |||||| ||||| |||||||    
T  35899042 attgatctctcaaatagtggtttcgatgggaagattcctgctcagcttaggaatctctcattgttgcaataccttgatctcag 35899124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 11544927 - 11544682
Alignment:
Q  1 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 100  Q
    |||||||||||||| |||||||||| |||| |||||||||||  | ||| || |     |||||| |||||||||||||| || || | ||| ||| |||    
T  11544927 tcaataactgagttacaacatctaaaatatttagacctcagtagtatgattattttcactcaaatcccaaaatttattggctccttaaccaagttatgat 11544828  T
Q  101 accttgatctctcaaatggtggttatgaggggaagattc----ctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatc 196  Q
    ||||| ||||||||||| ||  |||| | | ||||||||    || |||||||||| ||||||||||| |||  ||||||| |||| || |  ||||| |    
T  11544827 accttaatctctcaaatagttattatcatgcgaagattcattccttctcaacttggcaatctctcacagttgagacaccttgatcttagctacaatgaac 11544728  T
Q  197 ttgttggaacaatccctttccaactcggaaatctttcgttattgca 242  Q
    |  |||||  ||| ||||||||||||||||||||||| || |||||    
T  11544727 tcattggagaaattcctttccaactcggaaatctttcattgttgca 11544682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 44612085 - 44612193
Alignment:
Q  134 agattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatctttc 233  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||    ||||| ||   ||||  ||||||||||||||| |||||||||||    
T  44612085 agattccttctcaacttgggaatctctcacaattgcgacaccttgatctaagtgacaatgaactcactggagaaatccctttccaacttggaaatctttc 44612184  T
Q  234 gttattgca 242  Q
     || |||||    
T  44612185 attgttgca 44612193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 29228774 - 29228546
Alignment:
Q  5 taactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatacct 104  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||| ||||||    
T  29228774 taactgagctgcaacatctaaaatatctagacctcagttatttgcatactagtggtcaaatcccaaaatttattggctccttcagcaagttacaatacct 29228675  T
Q  105 tgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttgga 204  Q
      |||||||||  |||  |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||    ||||| ||  |||||    
T  29228674 caatctctcaacaggtcattatgatgggaagattccttctcaacttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattgga 29228575  T
Q  205 acaatccctttccaactcggaaatctttc 233  Q
     ||||||||||||||||||||||||||||    
T  29228574 gcaatccctttccaactcggaaatctttc 29228546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 29342073 - 29341845
Alignment:
Q  5 taactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatacct 104  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||| ||||||    
T  29342073 taactgagctgcaacatctaaaatatctagacctcagttatttgcatactagtggtcaaatcccaaaatttattggctccttcagcaagttacaatacct 29341974  T
Q  105 tgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttgga 204  Q
      |||||||||  |||  |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||    ||||| ||  |||||    
T  29341973 caatctctcaacaggtcattatgatgggaagattccttctcaacttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattgga 29341874  T
Q  205 acaatccctttccaactcggaaatctttc 233  Q
     ||||||||||||||||||||||||||||    
T  29341873 gcaatccctttccaactcggaaatctttc 29341845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 29508197 - 29508115
Alignment:
Q  148 cttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 230  Q
    ||||| |||||||||||||||||||||||| ||||||||  |||||| ||  ||||| |||| || |||||||| ||||||||    
T  29508197 cttggaaatctctcacaattgcaacaccttgatctcagaggtaatgaactcattggagcaattcccttccaacttggaaatct 29508115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 29507624 - 29507536
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatctttc 233  Q
    |||||||| |||||||||||||| ||||||||| ||||||| |  ||||| ||  ||||| |||||||||| ||||||  |||||||||    
T  29507624 caacttggaaatctctcacaattacaacaccttgatctcagctacaatgaactaattggagcaatccctttacaactccaaaatctttc 29507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 29507696 - 29507611
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 230  Q
    |||||||| |||||||||||||||||||||||| |||||||    ||||| ||  ||||| |||| || |||||||| ||||||||    
T  29507696 caacttggaaatctctcacaattgcaacaccttgatctcagcgaaaatgaactcattggagcaattcccttccaacttggaaatct 29507611  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 29507768 - 29507683
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 230  Q
    |||||||| |||||||||||||||||||||||| |||||||    ||||| ||  ||||| |||| || |||||||| ||||||||    
T  29507768 caacttggaaatctctcacaattgcaacaccttgatctcagcagaaatgaactcattggagcaattcccttccaacttggaaatct 29507683  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 29507912 - 29507874
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctc 183  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29507912 caacttggaaatctctcacaattgcaacaccttgatctc 29507874  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 29507984 - 29507946
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctc 183  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29507984 caacttggaaatctctcacaattgcaacaccttgatctc 29507946  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 29508128 - 29508090
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctc 183  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29508128 caacttggaaatctctcacaattgcaacaccttgatctc 29508090  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 29507840 - 29507755
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 230  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |  ||||| ||  |||||  ||| || |||||||| ||||||||    
T  29507840 caacttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaattcccttccaacttggaaatct 29507755  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 29508056 - 29507971
Alignment:
Q  145 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 230  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |  ||||| ||  |||||  ||| || |||||||| ||||||||    
T  29508056 caacttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaattcccttccaacttggaaatct 29507971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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