View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18030_high_10 (Length: 287)

Name: NF18030_high_10
Description: NF18030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18030_high_10
NF18030_high_10
[»] chr3 (18 HSPs)
chr3 (24-277)||(33235648-33235900)
chr3 (25-64)||(31922839-31922878)
chr3 (24-63)||(5173720-5173759)
chr3 (25-64)||(31904856-31904895)
chr3 (29-72)||(47624221-47624264)
chr3 (29-63)||(516534-516568)
chr3 (29-63)||(4495677-4495711)
chr3 (29-63)||(10484617-10484651)
chr3 (29-63)||(10795424-10795458)
chr3 (29-63)||(13628791-13628825)
chr3 (29-63)||(40272813-40272847)
chr3 (29-63)||(40390363-40390397)
chr3 (29-63)||(54032572-54032606)
chr3 (29-63)||(54484813-54484847)
chr3 (31-63)||(13730603-13730635)
chr3 (24-64)||(22609882-22609922)
chr3 (31-63)||(24851302-24851334)
chr3 (31-63)||(39203638-39203670)
[»] chr2 (11 HSPs)
chr2 (24-63)||(25632604-25632643)
chr2 (29-63)||(14444828-14444862)
chr2 (30-66)||(40579747-40579783)
chr2 (29-63)||(8575995-8576029)
chr2 (29-63)||(9671279-9671313)
chr2 (29-63)||(10543800-10543834)
chr2 (29-63)||(10546263-10546297)
chr2 (29-63)||(14530420-14530454)
chr2 (29-63)||(14544166-14544200)
chr2 (29-63)||(22371212-22371246)
chr2 (29-63)||(36871591-36871625)
[»] scaffold0018 (1 HSPs)
scaffold0018 (29-63)||(72868-72902)
[»] chr7 (6 HSPs)
chr7 (29-63)||(45018924-45018958)
chr7 (29-63)||(36602547-36602581)
chr7 (30-63)||(29907519-29907552)
chr7 (32-72)||(11741896-11741936)
chr7 (31-63)||(42476973-42477005)
chr7 (31-63)||(42805628-42805660)
[»] chr5 (8 HSPs)
chr5 (29-70)||(29184055-29184096)
chr5 (29-63)||(16957414-16957448)
chr5 (31-65)||(19438768-19438802)
chr5 (29-63)||(38879683-38879717)
chr5 (30-63)||(32354228-32354261)
chr5 (27-60)||(39801614-39801647)
chr5 (29-73)||(24448990-24449034)
chr5 (31-63)||(41014420-41014452)
[»] scaffold1176 (1 HSPs)
scaffold1176 (29-60)||(1591-1622)
[»] chr8 (10 HSPs)
chr8 (24-63)||(10857924-10857963)
chr8 (29-63)||(12625990-12626024)
chr8 (29-63)||(27468093-27468127)
chr8 (29-63)||(35261779-35261813)
chr8 (29-63)||(39460995-39461029)
chr8 (31-72)||(20870027-20870068)
chr8 (24-65)||(45071359-45071400)
chr8 (31-63)||(6760926-6760958)
chr8 (29-65)||(27508010-27508046)
chr8 (27-63)||(28407501-28407537)
[»] chr4 (16 HSPs)
chr4 (29-72)||(35532092-35532135)
chr4 (29-63)||(11394952-11394986)
chr4 (29-63)||(11404679-11404713)
chr4 (29-63)||(20639659-20639693)
chr4 (29-63)||(30690177-30690211)
chr4 (29-63)||(38755909-38755943)
chr4 (29-63)||(40553938-40553972)
chr4 (29-63)||(44363131-44363165)
chr4 (31-64)||(8473620-8473653)
chr4 (29-65)||(6430625-6430661)
chr4 (31-63)||(16408602-16408634)
chr4 (31-63)||(20225178-20225210)
chr4 (31-63)||(23501891-23501923)
chr4 (31-63)||(25629151-25629183)
chr4 (31-63)||(32484335-32484367)
chr4 (31-63)||(56323002-56323034)
[»] scaffold0057 (1 HSPs)
scaffold0057 (29-63)||(46931-46965)
[»] chr6 (5 HSPs)
chr6 (30-72)||(6808496-6808538)
chr6 (29-63)||(9161224-9161258)
chr6 (29-63)||(29355856-29355890)
chr6 (31-63)||(12892111-12892143)
chr6 (27-63)||(32728158-32728194)
[»] chr1 (6 HSPs)
chr1 (29-63)||(4349761-4349795)
chr1 (29-63)||(10668350-10668384)
chr1 (29-62)||(22325016-22325049)
chr1 (31-63)||(20004091-20004123)
chr1 (29-61)||(45402219-45402251)
chr1 (31-63)||(50606528-50606560)
[»] scaffold0223 (1 HSPs)
scaffold0223 (31-63)||(11231-11263)


Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 24 - 277
Target Start/End: Original strand, 33235648 - 33235900
Alignment:
Q  24 ccttacgtatgcgggagctttagtgcaccaggttgcccttattgtttttagttcatttattggaaattaatttgaaatttgaacaggagctaagaaagtg 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33235648 ccttacgtatgcggaagctttagtgcaccaggttgcccttattgtttttagttcatttattggaaattaatt-gaaatttgaacaggagctaagaaagtg 33235746  T
Q  124 gacgtggacttgaagcagcagaaagtaacagtgagtggatatgttgaaccaaagaaagtgttgaaagctgctcaatctacaaagaagaaggttgagcttt 223  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33235747 gatgtggacttgaagcagcagaaagtaacggtgagtggatatgttgaaccaaagaaagtgttgaaagctgctcaatctacaaagaagaaggttgagcttt 33235846  T
Q  224 ggccttatgttccatacactatggtggctcatccttatatttcacaagcctatg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33235847 ggccttatgttccatacactatggtggctcatccttatatttcacaagcctatg 33235900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 31922878 - 31922839
Alignment:
Q  25 cttacgtatgcgggagctttagtgcaccaggttgccctta 64  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  31922878 cttacgtatgcgggagctttagtgcaccaggctgccctta 31922839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 5173759 - 5173720
Alignment:
Q  24 ccttacgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  5173759 ccttgcgtatgcgggagctttagtgcaccgggttgccctt 5173720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 31904895 - 31904856
Alignment:
Q  25 cttacgtatgcgggagctttagtgcaccaggttgccctta 64  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  31904895 cttacgtgtgcgggagctttagtgcaccaggctgccctta 31904856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 47624221 - 47624264
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgcccttattgttttt 72  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  47624221 cgtatgcgggagctttagtgcaccgggttgcccttttttttttt 47624264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 516534 - 516568
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  516534 cgtatgcgggagctttagtgcaccgggttgccctt 516568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 4495711 - 4495677
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  4495711 cgtatgcgggagctttagtgcaccgggttgccctt 4495677  T

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Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 10484651 - 10484617
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  10484651 cgtatgcgggagctttagtgcaccgggttgccctt 10484617  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 10795458 - 10795424
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||||| |||||||||||||||||||    
T  10795458 cgtatgcgggagcttcagtgcaccaggttgccctt 10795424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 13628825 - 13628791
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  13628825 cgtatgcgggagctttagtgcaccgggttgccctt 13628791  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 40272847 - 40272813
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  40272847 cgtatgcgggagctttagtgcaccgggttgccctt 40272813  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 40390363 - 40390397
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  40390363 cgtatgcgggagctttagtgcaccgggttgccctt 40390397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 54032606 - 54032572
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  54032606 cgtatgcgggagctttagtgcaccgggttgccctt 54032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 54484813 - 54484847
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  54484813 cgtatgcgggagctttagtgcaccgggttgccctt 54484847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 13730635 - 13730603
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  13730635 tatgcgggagctttagtgcaccgggttgccctt 13730603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 22609882 - 22609922
Alignment:
Q  24 ccttacgtatgcgggagctttagtgcaccaggttgccctta 64  Q
    |||| ||||||||||||||| |||||||| |||||||||||    
T  22609882 ccttgcgtatgcgggagcttcagtgcaccgggttgccctta 22609922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 24851334 - 24851302
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  24851334 tatgcgggagctttagtgcaccgggttgccctt 24851302  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 39203638 - 39203670
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  39203638 tatgcgggagctttagtgcaccgggttgccctt 39203670  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 25632604 - 25632643
Alignment:
Q  24 ccttacgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  25632604 ccttacgtatgcgggagctttagtgcaccgggttgccctt 25632643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 14444828 - 14444862
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||||||||||||||    
T  14444828 cgtatgcgggagctttagtgcaccaggttgccctt 14444862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 40579783 - 40579747
Alignment:
Q  30 gtatgcgggagctttagtgcaccaggttgcccttatt 66  Q
    ||||||||||||||||||||||| |||||||||||||    
T  40579783 gtatgcgggagctttagtgcaccgggttgcccttatt 40579747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 8575995 - 8576029
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||| ||||||||||||||||||||||||||||    
T  8575995 cgtatgtgggagctttagtgcaccaggttgccctt 8576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 9671279 - 9671313
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  9671279 cgtatgcgggagctttagtgcaccgggttgccctt 9671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 10543800 - 10543834
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  10543800 cgtatgcgggagctttagtgcaccgggttgccctt 10543834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 10546263 - 10546297
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  10546263 cgtatgcgggagctttagtgcaccgggttgccctt 10546297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 14530420 - 14530454
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  14530420 cgtatgcgggagctttagtgcaccgggttgccctt 14530454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 14544166 - 14544200
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||||||||||||||| |||||||||    
T  14544166 cgtatgcgggagctttagtgcaccaagttgccctt 14544200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 22371212 - 22371246
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  22371212 cgtatgcgggagctttagtgcaccgggttgccctt 22371246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 36871591 - 36871625
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  36871591 cgtatgcgggagctttagtgcaccgggttgccctt 36871625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 72902 - 72868
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||||||||||||||    
T  72902 cgtatgcgggagctttagtgcaccaggttgccctt 72868  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 45018958 - 45018924
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||||||||||||||    
T  45018958 cgtatgcgggagctttagtgcaccaggttgccctt 45018924  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 36602547 - 36602581
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  36602547 cgtatgcgggagctttagtgcaccgggttgccctt 36602581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 29907519 - 29907552
Alignment:
Q  30 gtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||||||||||||| ||||||||||    
T  29907519 gtatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 11741896 - 11741936
Alignment:
Q  32 atgcgggagctttagtgcaccaggttgcccttattgttttt 72  Q
    ||||||||||| ||||||||| |||||||||||| ||||||    
T  11741896 atgcgggagctctagtgcaccgggttgcccttatagttttt 11741936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 42476973 - 42477005
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||| ||||||||||||||||||||    
T  42476973 tatgcgggagctctagtgcaccaggttgccctt 42477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 42805628 - 42805660
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  42805628 tatgcgggagctttagtgcaccgggttgccctt 42805660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 29184096 - 29184055
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgcccttattgttt 70  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  29184096 cgtatgcgggagctttagtgcaccgggttgcccttatagttt 29184055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 16957414 - 16957448
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  16957414 cgtatgcgggagctttagtgcaccgggttgccctt 16957448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 19438768 - 19438802
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgcccttat 65  Q
    |||||||||||| ||||||||||||||||||||||    
T  19438768 tatgcgggagctctagtgcaccaggttgcccttat 19438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 38879683 - 38879717
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  38879683 cgtatgcgggagctttagtgcaccgggttgccctt 38879717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 32354228 - 32354261
Alignment:
Q  30 gtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||||||||||||| ||||||||||    
T  32354228 gtatgcgggagctttagtgcaccgggttgccctt 32354261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 39801614 - 39801647
Alignment:
Q  27 tacgtatgcgggagctttagtgcaccaggttgcc 60  Q
    |||||||||||||||||||||||||| |||||||    
T  39801614 tacgtatgcgggagctttagtgcaccgggttgcc 39801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 24448990 - 24449034
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgcccttattgttttta 73  Q
    ||||||| |||||||||||||||| |||||||||| || ||||||    
T  24448990 cgtatgcaggagctttagtgcaccgggttgcccttttttttttta 24449034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 41014420 - 41014452
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  41014420 tatgcgggagctttagtgcaccgggttgccctt 41014452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 60
Target Start/End: Complemental strand, 1622 - 1591
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgcc 60  Q
    ||||||||||||||||||||||||||||||||    
T  1622 cgtatgcgggagctttagtgcaccaggttgcc 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000006; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 10857924 - 10857963
Alignment:
Q  24 ccttacgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  10857924 ccttgcgtatgcgggagctttagtgcaccgggttgccctt 10857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 12625990 - 12626024
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  12625990 cgtatgcgggagctttagtgcaccgggttgccctt 12626024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 27468127 - 27468093
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  27468127 cgtatgcgggagctttagtgcaccgggttgccctt 27468093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 35261779 - 35261813
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  35261779 cgtatgcgggagctttagtgcaccgggttgccctt 35261813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 39461029 - 39460995
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  39461029 cgtatgcgggagctttagtgcaccgggttgccctt 39460995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 20870027 - 20870068
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgcccttattgttttt 72  Q
    |||||||||||||||||||||| |||||||||| || |||||    
T  20870027 tatgcgggagctttagtgcaccgggttgcccttttttttttt 20870068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 45071359 - 45071400
Alignment:
Q  24 ccttacgtatgcgggagctttagtgcaccaggttgcccttat 65  Q
    |||| ||||||||||||||| |||||||| ||||||||||||    
T  45071359 ccttgcgtatgcgggagcttcagtgcaccgggttgcccttat 45071400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 6760926 - 6760958
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  6760926 tatgcgggagctttagtgcaccgggttgccctt 6760958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 27508010 - 27508046
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgcccttat 65  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  27508010 cgtatgcgggagctttagtgcaccgggttgtccttat 27508046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 28407501 - 28407537
Alignment:
Q  27 tacgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  28407501 tacgtatgcgggagctttactgcaccgggttgccctt 28407537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 35532092 - 35532135
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgcccttattgttttt 72  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  35532092 cgtatgcgggagctttagtgcaccgggttgcccttttttttttt 35532135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 11394952 - 11394986
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  11394952 cgtatgcgggagctttagtgcaccgggttgccctt 11394986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 11404679 - 11404713
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  11404679 cgtatgcgggagctttagtgcaccgggttgccctt 11404713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 20639693 - 20639659
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  20639693 cgtatgcgggagctttagtgcaccgggttgccctt 20639659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 30690211 - 30690177
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||||||||||||||||| |||||||    
T  30690211 cgtatgcgggagctttagtgcaccaggctgccctt 30690177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 38755943 - 38755909
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  38755943 cgtatgcgggagctttagtgcaccgggttgccctt 38755909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 40553972 - 40553938
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  40553972 cgtatgcgggagctttagtgcaccgggttgccctt 40553938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 44363165 - 44363131
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  44363165 cgtatgcgggagctttagtgcaccgggttgccctt 44363131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 8473653 - 8473620
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctta 64  Q
    |||||||||||||||||||||| |||||||||||    
T  8473653 tatgcgggagctttagtgcaccgggttgccctta 8473620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 6430661 - 6430625
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgcccttat 65  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  6430661 cgtatgcgggagctttagcgcaccgggttgcccttat 6430625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 16408634 - 16408602
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  16408634 tatgcgggagctttagtgcaccgggttgccctt 16408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 20225178 - 20225210
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  20225178 tatgcgggagctttagtgcaccgggttgccctt 20225210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 23501891 - 23501923
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  23501891 tatgcgggagctttagtgcaccgggttgccctt 23501923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 25629151 - 25629183
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  25629151 tatgcgggagctttagtgcaccgggttgccctt 25629183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 32484335 - 32484367
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  32484335 tatgcgggagctttagtgcaccgggttgccctt 32484367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 56323002 - 56323034
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  56323002 tatgcgggagctttagtgcaccgggttgccctt 56323034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 46931 - 46965
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  46931 cgtatgcgggagctttagtgcaccgggttgccctt 46965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 6808496 - 6808538
Alignment:
Q  30 gtatgcgggagctttagtgcaccaggttgcccttattgttttt 72  Q
    ||||||||||||||||||||||| |||||||||| || |||||    
T  6808496 gtatgcgggagctttagtgcaccgggttgccctttttcttttt 6808538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 9161224 - 9161258
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||| |||||||||||||||||||||||||    
T  9161224 cgtatgcggaagctttagtgcaccaggttgccctt 9161258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 29355890 - 29355856
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  29355890 cgtatgcgggagctttagtgcaccgggttgccctt 29355856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 12892111 - 12892143
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  12892111 tatgcgggagctttagtgcaccgggttgccctt 12892143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 32728194 - 32728158
Alignment:
Q  27 tacgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  32728194 tacgtatgcgggaactttagtgcaccatgttgccctt 32728158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 4349761 - 4349795
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  4349761 cgtatgcgggagctttagtgcaccgggttgccctt 4349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 10668350 - 10668384
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  10668350 cgtatgcgggagctttagtgcaccgggttgccctt 10668384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 22325016 - 22325049
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccct 62  Q
    ||||||||||||||||||||||||||| ||||||    
T  22325016 cgtatgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 20004123 - 20004091
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  20004123 tatgcgggagctttagtgcaccgggttgccctt 20004091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 45402219 - 45402251
Alignment:
Q  29 cgtatgcgggagctttagtgcaccaggttgccc 61  Q
    |||||||||||||||||||||||| ||||||||    
T  45402219 cgtatgcgggagctttagtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 50606528 - 50606560
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  50606528 tatgcgggagctttagtgcaccgggttgccctt 50606560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 11231 - 11263
Alignment:
Q  31 tatgcgggagctttagtgcaccaggttgccctt 63  Q
    |||||||||||| ||||||||||||||||||||    
T  11231 tatgcgggagctctagtgcaccaggttgccctt 11263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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