View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18033_low_24 (Length: 327)

Name: NF18033_low_24
Description: NF18033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18033_low_24
NF18033_low_24
[»] scaffold0038 (4 HSPs)
scaffold0038 (17-298)||(42887-43168)
scaffold0038 (17-309)||(116717-117009)
scaffold0038 (17-309)||(27369-27661)
scaffold0038 (17-309)||(34646-34938)
[»] chr6 (67 HSPs)
chr6 (17-298)||(28242725-28243006)
chr6 (17-309)||(28325402-28325694)
chr6 (17-309)||(28181035-28181327)
chr6 (17-309)||(28226871-28227163)
chr6 (17-309)||(28185287-28185579)
chr6 (28-298)||(28297698-28297968)
chr6 (28-298)||(28514105-28514375)
chr6 (17-309)||(28234485-28234776)
chr6 (17-235)||(28139462-28139680)
chr6 (63-298)||(25579686-25579921)
chr6 (72-237)||(26341980-26342145)
chr6 (96-236)||(27678946-27679086)
chr6 (17-298)||(31284209-31284490)
chr6 (74-298)||(27593005-27593229)
chr6 (96-236)||(27677661-27677801)
chr6 (63-298)||(26949628-26949863)
chr6 (74-237)||(28149916-28150078)
chr6 (17-231)||(26622897-26623111)
chr6 (17-231)||(26728875-26729089)
chr6 (36-298)||(27718364-27718626)
chr6 (17-298)||(27604690-27604971)
chr6 (111-236)||(27706449-27706574)
chr6 (63-287)||(26142832-26143056)
chr6 (27-298)||(27724830-27725101)
chr6 (29-295)||(26937027-26937293)
chr6 (68-298)||(29825999-29826229)
chr6 (63-236)||(25481709-25481882)
chr6 (75-236)||(27338112-27338273)
chr6 (75-236)||(27398852-27399013)
chr6 (27-236)||(27611049-27611258)
chr6 (27-231)||(27698546-27698750)
chr6 (17-236)||(26646400-26646619)
chr6 (17-236)||(26752368-26752587)
chr6 (40-298)||(26811453-26811711)
chr6 (135-277)||(26823879-26824021)
chr6 (17-298)||(28098354-28098635)
chr6 (74-270)||(25071637-25071833)
chr6 (17-230)||(26861537-26861750)
chr6 (78-298)||(26055908-26056128)
chr6 (78-298)||(26075878-26076098)
chr6 (135-298)||(26048884-26049047)
chr6 (135-298)||(26070053-26070216)
chr6 (75-298)||(28781118-28781341)
chr6 (17-231)||(26802363-26802577)
chr6 (17-231)||(26884084-26884300)
chr6 (75-236)||(28786257-28786418)
chr6 (75-236)||(28792378-28792539)
chr6 (75-231)||(27531249-27531405)
chr6 (111-286)||(25538555-25538730)
chr6 (17-211)||(26893543-26893737)
chr6 (93-225)||(2184285-2184417)
chr6 (135-231)||(26656028-26656124)
chr6 (135-231)||(26761999-26762095)
chr6 (39-241)||(26848603-26848805)
chr6 (187-297)||(27214508-27214618)
chr6 (187-297)||(27234610-27234720)
chr6 (220-301)||(26617746-26617827)
chr6 (220-301)||(26723674-26723755)
chr6 (74-226)||(26959143-26959296)
chr6 (77-226)||(26975033-26975182)
chr6 (39-115)||(27214360-27214436)
chr6 (39-199)||(27229175-27229335)
chr6 (39-115)||(27234792-27234868)
chr6 (74-234)||(27665166-27665326)
chr6 (78-225)||(2184880-2185027)
chr6 (74-241)||(26635668-26635835)
chr6 (74-241)||(26741634-26741801)
[»] scaffold0019 (1 HSPs)
scaffold0019 (17-298)||(58267-58548)
[»] chr4 (6 HSPs)
chr4 (17-298)||(5090939-5091220)
chr4 (17-236)||(18699434-18699653)
chr4 (17-236)||(18679601-18679820)
chr4 (17-236)||(18731538-18731757)
chr4 (17-236)||(18655511-18655730)
chr4 (17-236)||(18724119-18724338)
[»] chr1 (3 HSPs)
chr1 (17-241)||(268386-268610)
chr1 (112-259)||(28127690-28127837)
chr1 (63-259)||(28164373-28164569)
[»] scaffold0349 (2 HSPs)
scaffold0349 (27-236)||(3468-3678)
scaffold0349 (27-298)||(14341-14611)
[»] chr2 (2 HSPs)
chr2 (73-298)||(3279665-3279893)
chr2 (18-241)||(17993726-17993949)
[»] chr8 (4 HSPs)
chr8 (17-236)||(29273817-29274036)
chr8 (17-214)||(31903772-31903969)
chr8 (138-215)||(14794613-14794690)
chr8 (138-215)||(14801883-14801960)
[»] scaffold0277 (2 HSPs)
scaffold0277 (75-298)||(13617-13840)
scaffold0277 (75-297)||(4657-4879)
[»] scaffold0419 (1 HSPs)
scaffold0419 (75-236)||(7504-7665)
[»] scaffold1254 (1 HSPs)
scaffold1254 (75-190)||(10-125)
[»] chr5 (1 HSPs)
chr5 (29-298)||(16688944-16689213)


Alignment Details
Target: scaffold0038 (Bit Score: 198; Significance: 1e-108; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 298
Target Start/End: Original strand, 42887 - 43168
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  42887 cactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccaggaggtgacaaaata 42986  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  42987 acaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 43086  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  43087 acatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgagacatca 43168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 116717 - 117009
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||| |||||| ||||||||||||||    
T  116717 cactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaata 116816  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||  | ||||||| |||||| || |||||||| |||||||||||||||||||| |    
T  116817 acaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtcc 116916  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    |||| |||||||||||||| |||||| |||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  116917 acattattcactgcttcaaagaaaatgggcgcctagtttagccagttttctacgatgtggaaccttctcacgtgcgacatcacaagggcagtt 117009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 27369 - 27661
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||||| ||||||    
T  27369 cactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaata 27468  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||| | ||||||  ||| | ||||||||| ||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  27469 acatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 27568  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  27569 acatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtggaaccttctcatgtgcgacatcacaagggcagtt 27661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 34646 - 34938
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| ||||||||||  | ||||||||| | || ||||||| | |||||||| | |||||||||||||||||| |||||||||||||| || ||||||    
T  34646 cactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaata 34745  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  34746 acaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 34845  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    ||||||||||||||||||||||||   |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34846 acatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 34938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 298
Target Start/End: Original strand, 28242725 - 28243006
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  28242725 cactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccaggaggtgacaaaata 28242824  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  28242825 acaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28242924  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  28242925 acatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgagacatca 28243006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 28325402 - 28325694
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||| |||||| ||||||||||||||    
T  28325402 cactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaata 28325501  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||  | ||||||| |||||| || |||||||| |||||||||||||||||||| |    
T  28325502 acaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtcc 28325601  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    |||| |||||||||||||| |||||| |||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28325602 acattattcactgcttcaaagaaaatgggcgcctagtttagccagttttctacgatgtggaaccttctcacgtgcgacatcacaagggcagtt 28325694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 28181035 - 28181327
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||||||||||| |||||||||| | | || ||||||| | |||||||| || |||||||| |||||||||||||||||||||||||| ||||||    
T  28181035 cactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaata 28181134  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||| | ||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  28181135 acatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28181234  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    ||||||||||||||||||||||||   |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28181235 acatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 28181327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 28226871 - 28227163
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||||| ||||||    
T  28226871 cactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaata 28226970  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||| | ||||||  ||| | ||||||||| ||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  28226971 acatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28227070  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  28227071 acatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtggaaccttctcatgtgcgacatcacaagggcagtt 28227163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 28185287 - 28185579
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||||||| |||||| |||||||||| | | || ||||||| | |||||||| || |||||||| |||||||||||||||||||||||||| ||||||    
T  28185287 cactcgttatcgttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaata 28185386  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||| | ||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  28185387 acatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28185486  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    |||||||| |||||||||||||||   |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  28185487 acatcattaactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacacgggcagtt 28185579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 28 - 298
Target Start/End: Complemental strand, 28297968 - 28297698
Alignment:
Q  28 gttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcact 127  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  28297968 gttttattggaaatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcact 28297869  T
Q  128 tcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcac 227  Q
    |  |||   |||||||||| |||||||||||||||| ||||| |||| |||||| || |||||||||||||||||||| |||||||| ||||||||||||    
T  28297868 tttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcac 28297769  T
Q  228 tgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||||||||| ||| || ||||||||||| || || |||||||||||||||||||| |||||||||||    
T  28297768 tgcttcaaggaaagtagccgtctagttttgccgattttttatgatgtggaaccttctcatgtgcgacatca 28297698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 28 - 298
Target Start/End: Original strand, 28514105 - 28514375
Alignment:
Q  28 gttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcact 127  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  28514105 gttttattggaaatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcact 28514204  T
Q  128 tcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcac 227  Q
    |  |||   |||||||||| |||||||||||||||| ||||| |||| |||||| || |||||||||||||||||||| |||||||| ||||||||||||    
T  28514205 tttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcac 28514304  T
Q  228 tgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||||||||| ||| || ||||||||||| || || |||||||||||||||||||| |||||||||||    
T  28514305 tgcttcaaggaaagtagccgtctagttttgccgattttttatgatgtggaaccttctcatgtgcgacatca 28514375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 28234485 - 28234776
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| ||||||||||  | ||||||||| | || ||||||| | |||||||| | |||||||||||||||||| |||||||||||||| || ||||||    
T  28234485 cactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaata 28234584  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||| |||||||| |    
T  28234585 acaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtcc 28234684  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 309  Q
    |||||||| | |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28234685 acatcattta-tgcttcgaggaaaatagacgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagtt 28234776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 235
Target Start/End: Original strand, 28139462 - 28139680
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||  ||||| | ||||||||||||||||| |||| || |    ||||| | ||| || |||||||| || ||||||||||||||||||||||||    
T  28139462 cactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaata 28139561  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
     ||||||||||    |||||||||||||| |||||||||||||| || || || || | ||| || ||||||||||| ||||||||||| |||||||| |    
T  28139562 tcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtcc 28139661  T
Q  217 acatcattcactgcttcaa 235  Q
    |||||||| ||||||||||    
T  28139662 acatcattgactgcttcaa 28139680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 298
Target Start/End: Original strand, 25579686 - 25579921
Alignment:
Q  63 aagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattc 162  Q
    ||||||||||| |||||| ||||||| |  || |||||| |||| || ||||| ||||| ||||||  ||| ||||||||||| ||||||||||| ||||    
T  25579686 aagggaattcgtaccttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattc 25579785  T
Q  163 ccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaat 262  Q
    || | || |||  ||| || || |||||||||||||| ||||| |||||||| |||||||||||||||| ||||  ||| ||  || |||| |||||  |    
T  25579786 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgt 25579885  T
Q  263 attctatgatgtggaaccttctcacgtgcgacatca 298  Q
     |||||||||||||||||| ||||| | ||||||||    
T  25579886 tttctatgatgtggaacctactcacatacgacatca 25579921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 26342145 - 26341980
Alignment:
Q  72 cgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgt 171  Q
    ||||||||||||||||| || |||||||| ||||||||| |||| ||||  ||||||  |||||||||||||||||| ||||||||||||||  | || |    
T  26342145 cgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttct 26342046  T
Q  172 ctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaagg 237  Q
    | | ||| || || |||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||    
T  26342045 caatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattgcttcaagg 26341980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 27678946 - 27679086
Alignment:
Q  96 cttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcat 195  Q
    |||||| |||| || ||||| ||||| ||||||| ||| ||||||||||||||||||||||| ||||| || || |||| ||| || |||||||||||||    
T  27678946 cttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 27679045  T
Q  196 tttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
    |||| ||||| |||||||| |||||||||||||||| ||||    
T  27679046 tttgtttggacgaacttgtccacatcattcactgctacaag 27679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 298
Target Start/End: Original strand, 31284209 - 31284490
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| |||||||| |  || ||||||||||| | ||||  | | |||||||| | ||||||||||||||| || || |||||| |||| || |||||     
T  31284209 cactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatc 31284308  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| |||||   ||| ||||||||||||||||||||||| || ||||| || |||  ||| || |||||||| || ||||| ||||| |||||||| |    
T  31284309 acaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtcc 31284408  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||||||||  |  ||| ||||| | ||||| ||||||||  | |||| ||  ||||| |||||||| |||||||||||    
T  31284409 acatcattcacttgtataagcaaaatggtcgcctcgttttgcccgttttctttggcgtggatccttctcatgtgcgacatca 31284490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 298
Target Start/End: Complemental strand, 27593229 - 27593005
Alignment:
Q  74 caccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtct 173  Q
    |||||||||||||||||  |  |||||| ||||  | ||||| ||||| ||||||| ||| ||||||||||||||||||||||| ||||| || || |||    
T  27593229 caccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttct 27593130  T
Q  174 aacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatg 273  Q
    | ||| || ||||||||||| ||||| ||||| |||||||  ||||||||||| |||| ||||  |||  | ||||  ||||||||  | |||| || ||    
T  27593129 atcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgccctgttttgcctgttttctttggtg 27593030  T
Q  274 tggaaccttctcacgtgcgacatca 298  Q
    |||| |||||||| |||||||||||    
T  27593029 tggatccttctcatgtgcgacatca 27593005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 27677801 - 27677661
Alignment:
Q  96 cttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcat 195  Q
    |||||| |||| || ||||| ||||| ||||||| ||| ||||||||||||||||||||||| ||| | || || |||| ||| || |||||||||||||    
T  27677801 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcat 27677702  T
Q  196 tttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
    |||| ||||| |||||||| |||||||||||||||| ||||    
T  27677701 tttgtttggacgaacttgtccacatcattcactgctacaag 27677661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 63 - 298
Target Start/End: Original strand, 26949628 - 26949863
Alignment:
Q  63 aagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattc 162  Q
    |||||||| || |||||||||||||| |  ||||||||   |||||||||||| ||||| ||||| | |||    |||||||| || || |||  ||||     
T  26949628 aagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttcactcctcaagagaattgaagaatcgagaattgccatta 26949727  T
Q  163 ccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaat 262  Q
     |||||| |||||  | || || |||||||||||||| || || |||||||| || |||||||||| ||||||||||||  | ||||| ||| ||||| |    
T  26949728 tcgtcttttctaaggaatatgcttcttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagt 26949827  T
Q  263 attctatgatgtggaaccttctcacgtgcgacatca 298  Q
     ||||||||||| |||||||||||||||||||||||    
T  26949828 tttctatgatgtagaaccttctcacgtgcgacatca 26949863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 28149916 - 28150078
Alignment:
Q  74 caccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtct 173  Q
    ||||||||||||||| |  |||||| || |||| |||||||| ||||| ||||| | ||| |||||||||||||| ||||||||||||||  |||| |||    
T  28149916 caccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcact-ctcaaggccattgaagagtccaggattttcattccaatcttctct 28150014  T
Q  174 aacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaagg 237  Q
    | ||| ||  | |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||    
T  28150015 atcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaagg 28150078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 26622897 - 26623111
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| || ||||| | ||||||||||||||| | ||||  | | |||||||| | |||||||||||||||  | || |||||| |||| ||||||||     
T  26622897 cactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatc 26622996  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| ||||||  ||| || || ||||||||||||||||| ||||| || || |||  ||| || || | |||||||||||| |||||||||||||| |    
T  26622997 aaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtcc 26623096  T
Q  217 acatcattcactgct 231  Q
    |||||||||||||||    
T  26623097 acatcattcactgct 26623111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 26728875 - 26729089
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| || ||||| | ||||||||||||||| | ||||  | | |||||||| | |||||||||||||||  | || |||||| |||| ||||||||     
T  26728875 cactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatc 26728974  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| ||||||  ||| || || ||||||||||||||||| ||||| || || |||  ||| || || | |||||||||||| |||||||||||||| |    
T  26728975 aaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtcc 26729074  T
Q  217 acatcattcactgct 231  Q
    |||||||||||||||    
T  26729075 acatcattcactgct 26729089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 298
Target Start/End: Complemental strand, 27718626 - 27718364
Alignment:
Q  36 ggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaag 135  Q
    |||||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||| | ||| |    
T  27718626 ggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaagg 27718527  T
Q  136 ccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaa 235  Q
    ||||||| || ||||||||||| ||||| || || |||| ||| || ||||||||||| ||||| ||||| |||||||| ||||| |||||||||| |||    
T  27718526 ccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaa 27718427  T
Q  236 ggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    |  |||  | ||||| ||||||||  | ||||  |  ||||||||| || |||||||||||||    
T  27718426 gacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatca 27718364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 27604971 - 27604690
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| || |||||||  || ||||||||||| | ||||  | | ||||||||||  |||||||||||||| |  || |||| | |||| || |||||     
T  27604971 cactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatc 27604872  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    |||||  |||||| ||| |||||||| || || |||||||| ||||| || || |||| ||| || ||||||||||| ||||| |||||||||||||| |    
T  27604871 acaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttc 27604772  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    |||||||||| |||| || |  |||  | ||| | ||||||||  | |||| || ||||||||||||||| |||||||||||    
T  27604771 acatcattcattgctacacgacaaagggtcgcgtcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 27604690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 27706574 - 27706449
Alignment:
Q  111 gaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaac 210  Q
    ||||| ||||| ||||||| ||| ||||||||||||||||||||||| ||||| || || |||| ||  || ||||||||||||||||| ||||| ||||    
T  27706574 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaac 27706475  T
Q  211 ttgtgcacatcattcactgcttcaag 236  Q
    |||| |||||||||||||||| ||||    
T  27706474 ttgtccacatcattcactgctacaag 27706449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 63 - 287
Target Start/End: Original strand, 26142832 - 26143056
Alignment:
Q  63 aagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattc 162  Q
    ||||||||||| || ||||||||||| |  || ||| || |||| || ||||| ||||| ||||||  ||| ||||||||||| ||||||||||| ||||    
T  26142832 aagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattc 26142931  T
Q  163 ccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaat 262  Q
    || | || |||  ||| || || |||||||||||||| ||||| |||||||| |||||||||||||||| ||||  ||| ||  || |||| || ||  |    
T  26142932 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgt 26143031  T
Q  263 attctatgatgtggaaccttctcac 287  Q
     |||||||||||||||||| |||||    
T  26143032 tttctatgatgtggaacctactcac 26143056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 298
Target Start/End: Complemental strand, 27725101 - 27724830
Alignment:
Q  27 ggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcac 126  Q
    |||||||  |||||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||    
T  27725101 ggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 27725002  T
Q  127 ttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattca 226  Q
    | | ||| |||||||| || ||||||||||| ||||| || || |||| ||| || |||| |||||| ||||| ||||| |||||||| ||||| |||||    
T  27725001 tcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattca 27724902  T
Q  227 ctgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||| ||||  |||  | ||||| ||||||||  | ||||  |  ||||||||| || |||||||||||||    
T  27724901 ctgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatca 27724830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 295
Target Start/End: Original strand, 26937027 - 26937293
Alignment:
Q  29 ttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcactt 128  Q
    |||||||||  |||| ||||||| ||||||| |    |||||||||||||||||||||||||  ||||| || ||||| || ||||| ||||| ||||||    
T  26937027 ttttattggtcatctttacaaagctctttgtgattgtggaattcgcaccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcactt 26937126  T
Q  129 cgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcact 228  Q
      ||| || |||||||| ||  |||||  ||| || || || |||| ||| || ||| ||||||||||||| ||||| |||||||| |||||| || |||    
T  26937127 gtcaaggcaattgaagattccgggattgccatacctgtattctctatcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgact 26937226  T
Q  229 gcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgaca 295  Q
    ||||||||  |||  | |  ||| ||||||| || |||||||| ||||| ||||||||||| |||||    
T  26937227 gcttcaagacaaaaggtcatctaattttgcctattttctatgaagtggatccttctcacgttcgaca 26937293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 298
Target Start/End: Original strand, 29825999 - 29826229
Alignment:
Q  68 aattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtc 167  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||| ||||| ||||||   || || ||| |||| ||||||||   ||||||  |     
T  29825999 aattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcaattcaagaatctaggatagccattcctatt 29826098  T
Q  168 ttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattct 267  Q
    || |||| |||||| || |||||||| |||||||| |||||||||||||| ||  || | ||  |||||   ||  | || || |||||||| || ||||    
T  29826099 ttctctaccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttct 29826198  T
Q  268 atgatgtggaaccttctcacgtgcgacatca 298  Q
    |||||||||| |||||||| |||||||||||    
T  29826199 atgatgtggatccttctcatgtgcgacatca 29826229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 25481709 - 25481882
Alignment:
Q  63 aagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattc 162  Q
    ||||||||||| || ||||||||||| |  || |||||| |||| || ||||| ||||| ||||||  ||| ||||||||||| ||||||||||  ||||    
T  25481709 aagggaattcgtactttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattc 25481808  T
Q  163 ccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
    || | || |||  ||| || || |||||||||||||| ||||| |||||||| |||||||||||||||| ||||    
T  25481809 ccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 25481882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 27338273 - 27338112
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || ||| || |||| || ||||  ||||| ||||||  ||| ||||||||||||||||||||||| |||||| | || |||     
T  27338273 accttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctg 27338174  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
      || || || |||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  27338173 caaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaag 27338112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 27399013 - 27398852
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || ||| || |||| || ||||  ||||| ||||||  ||| ||||||||||||||||||||||| |||||| | || |||     
T  27399013 accttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctg 27398914  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
      || || || |||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  27398913 caaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaag 27398852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 236
Target Start/End: Complemental strand, 27611258 - 27611049
Alignment:
Q  27 ggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcac 126  Q
    |||||||  |||||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||| | |||| || ||||| ||||| ||||    
T  27611258 ggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcac 27611159  T
Q  127 ttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattca 226  Q
    | | ||| |||||||| || ||||||||||| ||||| || || |||| ||| || ||||||||||| ||||| ||||| |||||||| ||||| |||||    
T  27611158 tcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattca 27611059  T
Q  227 ctgcttcaag 236  Q
    ||||| ||||    
T  27611058 ctgctacaag 27611049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 27698750 - 27698546
Alignment:
Q  27 ggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcac 126  Q
    |||||||  |||||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||    
T  27698750 ggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 27698651  T
Q  127 ttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattca 226  Q
    | | ||| |||||||| || ||||||||||| ||||| || || |||  ||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  27698650 tcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattca 27698551  T
Q  227 ctgct 231  Q
    |||||    
T  27698550 ctgct 27698546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 26646400 - 26646619
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | ||||||| |||| |||||||||| | ||||  | | |||||||||| |||||||||||||||  | || ||| |  |||| || |||||     
T  26646400 cactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatc 26646499  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| |||||   ||| ||||||||||| ||||||||||| ||||| || || |||| ||| || |||||||||  |||||| ||||| |||||||| |    
T  26646500 acaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtcc 26646599  T
Q  217 acatcattcactgcttcaag 236  Q
    |||||||||| |||| ||||    
T  26646600 acatcattcattgctacaag 26646619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 26752368 - 26752587
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | ||||||| |||| |||||||||| | ||||  | | |||||||||| |||||||||||||||  | || ||| |  |||| || |||||     
T  26752368 cactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatc 26752467  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| |||||   ||| ||||||||||| ||||||||||| ||||| || || |||| ||| || |||||||||  |||||| ||||| |||||||| |    
T  26752468 acaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtcc 26752567  T
Q  217 acatcattcactgcttcaag 236  Q
    |||||||||| |||| ||||    
T  26752568 acatcattcattgctacaag 26752587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 298
Target Start/End: Original strand, 26811453 - 26811711
Alignment:
Q  40 atctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccat 139  Q
    ||||||| |||| ||||||| | || ||||| || ||||||||||||||||  ||||||||  ||||||||||||| ||||| || || | |||   |||    
T  26811453 atctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacaccttcgctcctcaagagcat 26811552  T
Q  140 tgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaa 239  Q
    |||| | |||||||||  ||||   || || ||| | || || ||  |||| || ||||| || ||||| ||||| ||||||||| ||| ||||||||||    
T  26811553 tgaacactctaggattgccattattgtattctctgagaactatgcaacttcgtcgttttgtttagatgagcttgtccacatcattaactacttcaaggaa 26811652  T
Q  240 aataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||  | ||||| ||| | ||| | ||||||| |||||||||||||||||||||||||||    
T  26811653 aaaggtcgccttgttctaccagttttctatggtgtggaaccttctcacgtgcgacatca 26811711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 277
Target Start/End: Original strand, 26823879 - 26824021
Alignment:
Q  135 gccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttca 234  Q
    ||||||||||||||||||||||| ||||| || || |||  ||| || ||||||||||||||||| ||||| |||||||| |||||||||| |  || ||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctaca 26823978  T
Q  235 aggaaaataggcgcctagttttgccaatattctatgatgtgga 277  Q
    |||||||  ||||||| ||||||||  | ||||||| ||||||    
T  26823979 aggaaaaggggcgcctcgttttgcctgttttctatggtgtgga 26824021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 28098635 - 28098354
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| |||||||||| ||||||||||||||||| ||||||| |    ||| | ||||||||||||||  | | ||| ||||| | ||||||   |||     
T  28098635 cactcggtatggttttactggaaatctctacaaagctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaatc 28098536  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||  || |||  ||| ||||| |||||||| |||||||| ||||| ||||| ||||| || || || |||||||  ||||| |||||||||||||| |    
T  28098535 acacaatcccttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtcc 28098436  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||||||| | | | | |||||  |  || | ||||| || || || | ||| ||||||||||||||||||||||||||    
T  28098435 acatcattcaccgttacgaagaaaagggttgcttcgtttttcctattttttgtgacgtggaaccttctcacgtgcgacatca 28098354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 270
Target Start/End: Original strand, 25071637 - 25071833
Alignment:
Q  74 caccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtct 173  Q
    |||||| |||||||||| ||||||| |  ||||||||||||| ||||| || || |||||   ||||||||| || || |||  ||||  |||||| |||    
T  25071637 cacctttattgatgacaaagagcttaagagaggtgacgaaatcacaccttcgctccgcaagagcattgaagattcgagaattgccattatcgtcttctct 25071736  T
Q  174 aacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatg 270  Q
    ||  | || || |||||||||||||| || || |||||||| ||||||||||||| |||||||||||| || ||||| ||| | ||||| |||||||    
T  25071737 aaagactatgcttcttcttcattttgtttagacgaacttgtccacatcattcactacttcaaggaaaagagtcgccttgttctaccaattttctatg 25071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 230
Target Start/End: Original strand, 26861537 - 26861750
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| ||||||||||  || ||||||||||| | ||||  | | |||||||||| ||||||||| |||||  | || |||||| |||| || |||||     
T  26861537 cactcggtatggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatc 26861636  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | |   |||||   ||| ||||||||||||||||| ||||||||||| || || |||  ||| || |||||||| |||||||| |||||||||||||| |    
T  26861637 aaaagatcactcgacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtcc 26861736  T
Q  217 acatcattcactgc 230  Q
    | |||||| |||||    
T  26861737 aaatcattaactgc 26861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 298
Target Start/End: Original strand, 26055908 - 26056128
Alignment:
Q  78 ttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaaca 177  Q
    ||||||||||| |  || |||||| |||| || ||||| ||| | ||||||  ||| ||||| ||||| ||| ||||||| |||||| | || |||  ||    
T  26055908 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgcca 26056007  T
Q  178 attacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtgga 277  Q
    | || || |||||||||||||| ||||| |||||||| |||||||||||||||| |||   ||| ||  || |||| |||||  | ||||||||||||||    
T  26056008 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtgga 26056107  T
Q  278 accttctcacgtgcgacatca 298  Q
    |||| ||||| | ||||||||    
T  26056108 acctactcacatacgacatca 26056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 298
Target Start/End: Original strand, 26075878 - 26076098
Alignment:
Q  78 ttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaaca 177  Q
    ||||||||||| |  || |||||| |||| || ||||| ||| | ||||||  ||| ||||| ||||| ||| ||||||| |||||| | || |||  ||    
T  26075878 ttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgcca 26075977  T
Q  178 attacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtgga 277  Q
    | || || |||||||||||||| ||||| |||||||| |||||||||||||||| |||   ||| ||  || |||| |||||  | ||||||||||||||    
T  26075978 actatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtgga 26076077  T
Q  278 accttctcacgtgcgacatca 298  Q
    |||| ||||| | ||||||||    
T  26076078 acctactcacatacgacatca 26076098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 26048884 - 26049047
Alignment:
Q  135 gccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttca 234  Q
    ||||| ||||| ||||||||||| |||||| | || |||  ||| || || |||||||||||||| ||||| |||||||| |||||||||||||||| ||    
T  26048884 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26048983  T
Q  235 aggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||  ||| ||  || |||| |||||  | || ||||||||||||||| ||||| | ||||||||    
T  26048984 agacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatca 26049047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 26070053 - 26070216
Alignment:
Q  135 gccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttca 234  Q
    ||||| ||||| ||||||||||| |||||| | || |||  ||| || || |||||||||||||| ||||| |||||||| |||||||||||||||| ||    
T  26070053 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26070152  T
Q  235 aggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||  ||| ||  || |||| |||||  | || ||||||||||||||| ||||| | ||||||||    
T  26070153 agacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatca 26070216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 298
Target Start/End: Original strand, 28781118 - 28781341
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||| | ||| ||||| ||||| ||||||||||| ||||| || || ||||    
T  28781118 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttcta 28781217  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgt 274  Q
     ||| || ||| ||||   |||||||||||| |||||||| ||||| ||||| |||| ||||  |||  | ||||| ||||||||  | |||| || |||    
T  28781218 tcaactatgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgt 28781317  T
Q  275 ggaaccttctcacgtgcgacatca 298  Q
    ||| ||| || | |||||||||||    
T  28781318 ggatcctactaatgtgcgacatca 28781341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 26802363 - 26802577
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| || |||||||  || ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||||| |||| || |||||     
T  26802363 cactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatc 26802462  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| |||||   ||| ||||||||||| ||||| ||||| ||||| || || |||| ||| || ||||||||   |||||||||||| |||||||| |    
T  26802463 acaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttc 26802562  T
Q  217 acatcattcactgct 231  Q
    |||| ||||| ||||    
T  26802563 acattattcattgct 26802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 26884084 - 26884300
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| |||||||| | ||||||||||||||| | ||||  ||| |||||||| | ||||||||||||||| |   | |||| | ||||   ||||||     
T  26884084 cactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatc 26884183  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| |||||   ||| ||||||||||| ||||| ||||| |||||  | || |||| ||| || || |||||||||||||| ||||| |||||||| |    
T  26884184 acaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtcc 26884283  T
Q  217 aca--tcattcactgct 231  Q
    |||  ||||||||||||    
T  26884284 acatgtcattcactgct 26884300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 28786257 - 28786418
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||| | ||| ||||| ||||| ||||||||||| ||||| || || ||||    
T  28786257 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttcta 28786356  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
     ||| |||||| | ||   |||||||||||| |||||||| ||||| ||||| |||| ||||    
T  28786357 tcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaag 28786418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 28792378 - 28792539
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||| | ||| ||||| ||||| ||||||||||| ||||| || || ||||    
T  28792378 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttcta 28792477  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
     ||| |||||| | ||   |||||||||||| |||||||| ||||| ||||| |||| ||||    
T  28792478 tcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaag 28792539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 231
Target Start/End: Complemental strand, 27531405 - 27531249
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| |||||    || ||||||||| | ||||||||||| |||||||| || |||     
T  27531405 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctg 27531306  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgct 231  Q
    | || || || |||||||||||||| ||||| |||||||| ||||||| ||| ||||    
T  27531305 aaaactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgct 27531249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 286
Target Start/End: Original strand, 25538555 - 25538730
Alignment:
Q  111 gaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaac 210  Q
    ||||| ||||| ||||||  ||| ||||| ||||| ||||| ||||| |||||| | || |||  ||| || || |||||||||||||| ||||| ||||    
T  25538555 gaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaac 25538654  T
Q  211 ttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctca 286  Q
    |||| || ||||||||||||| ||||  ||| ||  || |||| |||||  | |||||||||||||||||| ||||    
T  25538655 ttgtccagatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactca 25538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 26893737 - 26893543
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||||| ||||||||  ||  |||| || |||| ||||||| | |  ||||||| ||||||||||||||| | |||||||||  |||||||||||||     
T  26893737 cactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatc 26893638  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaact 211  Q
     |||| ||||||  ||| || ||||||||||||| ||| | |||||| ||| | |||| ||| || || ||||||  |||||| ||||| |||||    
T  26893637 tcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctctatcaactatgcttcttctatattttgtttggaagaact 26893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 2184285 - 2184417
Alignment:
Q  93 gagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttctt 192  Q
    ||||||||| |||| |  ||||||||| | ||||||   ||||||||||||||||| || |||||||| || || || || || || || || |||||||    
T  2184285 gagcttcaacgagggggtgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttctt 2184384  T
Q  193 cattttgcttggatgaacttgtgcacatcattc 225  Q
    ||||||| ||||| |||||||| ||||||||||    
T  2184385 cattttgtttggacgaacttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 26656028 - 26656124
Alignment:
Q  135 gccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgct 231  Q
    ||||||||||| || |||||||| |||||| | || |||  ||| || || |||||||||||||| ||||| |||||||| ||||||||||| ||||    
T  26656028 gccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgct 26656124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 26761999 - 26762095
Alignment:
Q  135 gccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgct 231  Q
    ||||||||||| || |||||||| |||||| | || |||  ||| || || |||||||||||||| ||||| |||||||| ||||||||||| ||||    
T  26761999 gccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgct 26762095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 241
Target Start/End: Original strand, 26848603 - 26848805
Alignment:
Q  39 aatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagcca 138  Q
    |||||||| |||| ||||| | | || ||||| || ||||||||||||||||  || |||||  | ||||| || || ||||| || || | |||   ||    
T  26848603 aatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgctcctcaagaaca 26848702  T
Q  139 ttgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaagga 238  Q
    ||||||| || ||||||| |||||  || || ||| | || || ||| ||||||| ||||| ||||| |||||||| ||||||||||| |||| ||||||    
T  26848703 ttgaagactcgaggatttccattcttgtattctctgagaactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgctccaagga 26848802  T
Q  239 aaa 241  Q
    |||    
T  26848803 aaa 26848805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 297
Target Start/End: Original strand, 27214508 - 27214618
Alignment:
Q  187 cttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctca 286  Q
    ||||||||||||| ||||| |||||||| ||||||| ||| |||| |||||||||  | ||||| ||| | ||  | |||||||  || |||||||||||    
T  27214508 cttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctca 27214607  T
Q  287 cgtgcgacatc 297  Q
    | |||||||||    
T  27214608 cttgcgacatc 27214618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 297
Target Start/End: Complemental strand, 27234720 - 27234610
Alignment:
Q  187 cttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctca 286  Q
    ||||||||||||| ||||| |||||||| ||||||| ||| |||| |||||||||  | ||||| ||| | ||  | |||||||  || |||||||||||    
T  27234720 cttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctca 27234621  T
Q  287 cgtgcgacatc 297  Q
    | |||||||||    
T  27234620 cttgcgacatc 27234610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 26617746 - 26617827
Alignment:
Q  220 tcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaa 301  Q
    ||||||||| ||| ||||||||||| ||||| ||| | ||| | ||||||||||||||||||||| | || |||||| ||||    
T  26617746 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaa 26617827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 26723674 - 26723755
Alignment:
Q  220 tcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatcacaa 301  Q
    ||||||||| ||| ||||||||||| ||||| ||| | ||| | ||||||||||||||||||||| | || |||||| ||||    
T  26723674 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaa 26723755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 26959143 - 26959296
Alignment:
Q  74 caccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagc-cattgaagagtctaggattttcattcccgtcttgtc 172  Q
    ||||||||||||||||| ||||||| ||  ||| || ||||| ||||| || |||| |||||  ||||||||| || ||||||  ||||  ||| || ||    
T  26959143 caccttcattgatgacaaagagcttaaaaaaggggatgaaatcacaccttcgcttctcaaagagcattgaagactcgaggattgccattatcgttttctc 26959242  T
Q  173 taacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattca 226  Q
    |||  | || || |||||||| ||||  |||||||||||||| |||||||||||    
T  26959243 taaggaatatgcttcttcttcgttttatttggatgaacttgtccacatcattca 26959296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 26975033 - 26975182
Alignment:
Q  77 cttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaac 176  Q
    ||||||||||||||  |||||| ||  ||| |||||||| ||||| || || | |||   ||||||||| || ||||||  ||||  |||||| |||||     
T  26975033 cttcattgatgacaaggagcttaaaaaaggggacgaaatcacaccttcgctcctcaagagcattgaagactcgaggattaccattatcgtcttctctaaa 26975132  T
Q  177 aattacgcctcttcttcattttgcttggatgaacttgtgcacatcattca 226  Q
     | || || |||||||||||||| ||||| |||||||| |||||||||||    
T  26975133 gactatgcttcttcttcattttgtttggacgaacttgtccacatcattca 26975182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 27214360 - 27214436
Alignment:
Q  39 aatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaat 115  Q
    |||||||| |||| ||||||| | || ||||| || ||||||||||||||||  ||||||||  |||||||||||||    
T  27214360 aatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaat 27214436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 27229175 - 27229335
Alignment:
Q  39 aatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagcca 138  Q
    ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||||| |||| |||||||| ||||| |||||   ||| ||||    
T  27229175 aatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggcca 27229274  T
Q  139 ttgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttg 199  Q
    |||| || ||| ||||||| |||||| | || |||  ||| || || ||||||||||||||    
T  27229275 ttgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttg 27229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 27234868 - 27234792
Alignment:
Q  39 aatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaat 115  Q
    |||||||| |||| ||||||| | || ||||| || ||||||||||||||||  ||||||||  |||||||||||||    
T  27234868 aatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaat 27234792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 27665326 - 27665166
Alignment:
Q  74 caccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtct 173  Q
    |||||||||||||||||  ||||||| |   ||||||||||| ||||| ||||| || ||   ||||||||| || ||||||  ||||    | || |||    
T  27665326 caccttcattgatgacaaggagcttccaactggtgacgaaatcacaccttcactccggaagagcattgaagaatcgaggattgccattattatattctct 27665227  T
Q  174 aacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttca 234  Q
    || || || ||  ||||||||||||| || ||||||||||| ||||||||||| |||||||    
T  27665226 aagaactatgctacttcttcattttgtttagatgaacttgtccacatcattcattgcttca 27665166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 2184880 - 2185027
Alignment:
Q  78 ttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaaca 177  Q
    ||||| ||||||  |||||||||| |||| |  ||||||||||| || |||   |||||||||||||| || || |||||||| || || || || ||      
T  2184880 ttcatggatgacgaagagcttcaacgagggggtgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaagg 2184979  T
Q  178 attacgcctcttcttcattttgcttggatgaacttgtgcacatcattc 225  Q
    | || || |||||||||||||| ||||| |||||||| || |||||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattc 2185027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 26635668 - 26635835
Alignment:
Q  74 caccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtct 173  Q
    |||||||||||||||||  |||||| ||  ||| || ||||| ||||| || || | |||   |||||||||||| ||||||  ||||  ||| || |||    
T  26635668 caccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttttctct 26635767  T
Q  174 aacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaa 241  Q
    ||  | || || |||||||  ||||| |||||||||||||| ||||||||||| |||| ||| |||||    
T  26635768 aaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaatgaaaa 26635835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 26741634 - 26741801
Alignment:
Q  74 caccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtct 173  Q
    |||||||||||||||||  |||||| ||  ||| || ||||| ||||| || || | |||   |||||||||||| ||||||  ||||  ||| || |||    
T  26741634 caccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttttctct 26741733  T
Q  174 aacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaa 241  Q
    ||  | || || |||||||  ||||| |||||||||||||| ||||||||||| |||| ||| |||||    
T  26741734 aaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaatgaaaa 26741801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 58548 - 58267
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| |||||||||| |||||||||||||| || ||||||| | |||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  58548 cactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaata 58449  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||| ||||||  ||| |||||| ||||||||||||||||||||||||||||||||| ||| || || |||||||||||||||||| | |||||||| |    
T  58448 acaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtcc 58349  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  58348 acatcattcactgcttcgaggaatatgggcgcctagttttgccaattttctatgacgtggaaccttctcacgtgcgacatca 58267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 5091220 - 5090939
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||||| ||||||| ||||||||||||  ||| |||  ||   |||||||||| |||||||||||||||||||||||||||  |||| ||| |||||    
T  5091220 cactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttcagcgaggagaccaaata 5091121  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    ||||||||||||| ||| |||||| |||| |||| |||| |||||  ||| || |||||| | || || |||||||| ||||| || ||||||||||| |    
T  5091120 acaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgcttcttcttcgttttgtttagatgaacttgtcc 5091021  T
Q  217 acatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    | || |||||||||| |||||||||| |  |||| |||||||| || ||||||| ||||||||||||||| |||||| ||||    
T  5091020 atattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtggaaccttctcatgtgcgatatca 5090939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 18699653 - 18699434
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | ||||||| |||  |||||||||||| ||||  | | |||||||| | |||||||||||||||| | || || ||| | || || |||||     
T  18699653 cactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatc 18699554  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| |||||   ||| |||||||||||||||||||| |||||||| || || |||| ||| || ||||||||||||||||| ||||| |||||||| |    
T  18699553 aaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttc 18699454  T
Q  217 acatcattcactgcttcaag 236  Q
    ||||||||||||||| ||||    
T  18699453 acatcattcactgctacaag 18699434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 18679820 - 18679601
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | ||||||| |||  |||||||||| | ||||  | | || ||||| | |||||||||||||||| | || || ||| |||| || |||||     
T  18679820 cactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatc 18679721  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| |||||   ||| |||||||||||||||||||| |||||||| || || |||| ||| || ||||||||||||||||| ||||| |||||||| |    
T  18679720 aaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtcc 18679621  T
Q  217 acatcattcactgcttcaag 236  Q
    ||||||||||||||| ||||    
T  18679620 acatcattcactgctacaag 18679601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 18731757 - 18731538
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | ||||||| |||  ||||||||| || ||||  | | |||||||| | |||||||||||||||| | || || ||| |||| || |||||     
T  18731757 cactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatc 18731658  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| |||||   ||| |||||||||||||||||||| |||||||| || || |||| ||| || ||||||||||||||||| ||||| |||||||| |    
T  18731657 aaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtcc 18731558  T
Q  217 acatcattcactgcttcaag 236  Q
    ||||||| ||||||| ||||    
T  18731557 acatcatgcactgctacaag 18731538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 18655730 - 18655511
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | ||||||| |||  |||||||||||| ||||  | | |||||||| | |||||||||||||||| | ||||| ||| | || || |||||     
T  18655730 cactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatc 18655631  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| |||||   ||| |||||| ||||||||||||| || ||||| || || |||| ||| || ||||||||||||||||| ||||| |||||||| |    
T  18655630 aaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtcc 18655531  T
Q  217 acatcattcactgcttcaag 236  Q
     |||||||||||||| ||||    
T  18655530 gcatcattcactgctacaag 18655511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 18724338 - 18724119
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | ||||||| |||  |||||||||| | ||||  | | |||||||| | |||||||||||||||| | || || ||| |||| || |||||     
T  18724338 cactcgtaacggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatc 18724239  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| |||||   ||| |||||||||||||||||||| |||||||| || || |||| ||| || ||||||||||||||||| ||| | |||||||| |    
T  18724238 aaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtcc 18724139  T
Q  217 acatcattcactgcttcaag 236  Q
    ||||||| ||||||| ||||    
T  18724138 acatcatgcactgctacaag 18724119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 268610 - 268386
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | |||||||||||  |||||||||| | ||||  | | |||||||| | |||||||||||||||  | || |||||| |||| || |||||     
T  268610 cactcgtgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatc 268511  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | ||| |||||   ||| ||||||||||||||||||||||| ||||| || || |||| ||| || ||||||||||||||||| ||||| |||||||| |    
T  268510 aaaccatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtcc 268411  T
Q  217 acatcattcactgcttcaaggaaaa 241  Q
    ||||||||||||||| |||| ||||    
T  268410 acatcattcactgctacaagaaaaa 268386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 28127837 - 28127690
Alignment:
Q  112 aaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaact 211  Q
    |||| ||||||||||||   || ||||||||||| ||||| ||||| ||||| || || |||| ||| || ||||||||||||||||| ||||| |||||    
T  28127837 aaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaact 28127738  T
Q  212 tgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgcc 259  Q
    |||||||||||||||||||| ||||  |||  | ||||||||||||||    
T  28127737 tgtgcacatcattcactgctacaagacaaagggtcgcctagttttgcc 28127690  T

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Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 259
Target Start/End: Complemental strand, 28164569 - 28164373
Alignment:
Q  63 aagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattc 162  Q
    |||||||||| ||| |||||||||||  | || ||| |  |||| || ||||| ||||||||| |   ||| ||||||||| | ||| | ||||| ||||    
T  28164569 aagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattc 28164470  T
Q  163 ccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgcc 259  Q
    | || || |||| ||| || ||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||  |||  | ||||||||||||||    
T  28164469 ctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcc 28164373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 236
Target Start/End: Complemental strand, 3678 - 3468
Alignment:
Q  27 ggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcac 126  Q
    |||||||  |||||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||    
T  3678 ggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 3579  T
Q  127 ttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaat-tacgcctcttcttcattttgcttggatgaacttgtgcacatcattc 225  Q
    | | ||| |||||||| || ||||||||||| ||||| || || |||| |||  || ||||||||||||||||| ||||| |||||||| ||||||||||    
T  3578 tcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattc 3479  T
Q  226 actgcttcaag 236  Q
    |||||| ||||    
T  3478 actgctacaag 3468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 298
Target Start/End: Complemental strand, 14611 - 14341
Alignment:
Q  27 ggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcac 126  Q
    |||||||  |||||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||    
T  14611 ggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 14512  T
Q  127 ttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattca 226  Q
    | | ||| |||||||| || ||||||||||| ||||| || || |||| ||| || |||| |||||| ||||| ||||| |||||||| ||||| |||||    
T  14511 tcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattca 14413  T
Q  227 ctgcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||| ||||  |||  | ||||| ||||||||  | ||||  |  ||||||||| || |||||||||||||    
T  14412 ctgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatca 14341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 73 - 298
Target Start/End: Original strand, 3279665 - 3279893
Alignment:
Q  73 gcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtc 172  Q
    |||||||||||||||| || |||||||| |||||||| ||||| ||||  ||||||  ||| ||||| |||||||| | |||||| ||||| ||||| ||    
T  3279665 gcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctc 3279764  T
Q  173 taacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgctt---caaggaaaataggcgcctagttttgccaatattctat 269  Q
    || ||| || || ||||||  |||||| ||||| |||||||| ||||||||||| |||||   | | || ||  | |||  | |||| || || ||||||    
T  3279765 tatcaactatgcttcttctatattttgtttggacgaacttgtccacatcattcattgcttcgaccaagagaagggtcgcaaaattttacctattttctat 3279864  T
Q  270 gatgtggaaccttctcacgtgcgacatca 298  Q
    |||||||||||||| ||||||||||||||    
T  3279865 gatgtggaaccttcccacgtgcgacatca 3279893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 17993949 - 17993726
Alignment:
Q  18 actcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataa 117  Q
    ||||| |||||||| |  || |||||||| |||| ||||| | | ||||||||||| |||||||| ||||||| |||||||||  ||||||| ||||| |    
T  17993949 actcgatatggtttcaccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatca 17993850  T
Q  118 caccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgca 217  Q
    ||||||| || | |||   ||||||||| || || |||   |||  |||||| || ||  | || || |||||||||||||| || || |||||||| ||    
T  17993849 caccgtcgctcctcaagagcattgaagactcaagaattgcgattatcgtcttctcaaaggactatgcttcttcttcattttgtttagacgaacttgtcca 17993750  T
Q  218 catcattcactgcttcaaggaaaa 241  Q
    ||||||||| |||| ||| |||||    
T  17993749 catcattcaatgctccaatgaaaa 17993726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 29274036 - 29273817
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    ||||||| | |||||||||||  ||||||||||   ||||  | | |||||||| | |||||||||||||||  | || |||||| |||| || |||||     
T  29274036 cactcgtgacggttttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatc 29273937  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgc 216  Q
    | | | |||||   ||| | ||||||||||||||| ||||| ||||| || || |||| ||| || ||||||||||||||||| ||||| |||||||| |    
T  29273936 aaatcatcactcgacaatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtcc 29273837  T
Q  217 acatcattcactgcttcaag 236  Q
    ||||||||||||||| ||||    
T  29273836 acatcattcactgctacaag 29273817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 31903772 - 31903969
Alignment:
Q  17 cactcgttatggttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaata 116  Q
    |||||| |||||||||| ||||||||||||||||| ||||| | | |||||||| | |||||| ||||| ||   ||| |||||| ||||  | |||||     
T  31903772 cactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctttattgacgatgaagaacttcaaagaggacatgaaatc 31903871  T
Q  117 acaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgt 214  Q
    ||||| ||||||    | || ||||||||||||||||||  ||||   ||  | ||||| || || || |||||||||||||||||  ||||||||||    
T  31903872 acaccatcacttttagaggcaattgaagagtctaggattgccattattgtgctctctaaaaactatgcttcttcttcattttgcttacatgaacttgt 31903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 14794613 - 14794690
Alignment:
Q  138 attgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtg 215  Q
    ||||||||||| ||||||||||| || || || ||  | ||||| || ||||||||||||||||| || |||||||||    
T  14794613 attgaagagtccaggattttcatcccagttttatcagaaaattatgcatcttcttcattttgcttagacgaacttgtg 14794690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 14801883 - 14801960
Alignment:
Q  138 attgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtg 215  Q
    ||||||||||| ||||||||||| || || || ||  | ||||| || ||||||||||||||||| || |||||||||    
T  14801883 attgaagagtccaggattttcatcccagttttatcagaaaattatgcatcttcttcattttgcttagacgaacttgtg 14801960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 298
Target Start/End: Complemental strand, 13840 - 13617
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||| | ||| ||||| ||||| ||||||||||| ||||| || || ||||    
T  13840 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttcta 13741  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgt 274  Q
     ||| |||||| ||||   |||||||||||| |||||||| ||||| ||||| |||| ||||  |||  | ||||| ||||||||  | |||| || |||    
T  13740 tcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgt 13641  T
Q  275 ggaaccttctcacgtgcgacatca 298  Q
    ||| ||| || | |||||||||||    
T  13640 ggatcctactaatgtgcgacatca 13617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 297
Target Start/End: Complemental strand, 4879 - 4657
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| || || ||||| |||||||| || ||||||||||| ||||| || || ||||    
T  4879 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttcta 4780  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaaggaaaataggcgcctagttttgccaatattctatgatgt 274  Q
     |   || |||| |||||| ||||| ||||| |||||||| ||||| |||||||||| ||||  |||  | ||||| ||||||||  | ||||  |  ||    
T  4779 tcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgt 4680  T
Q  275 ggaaccttctcacgtgcgacatc 297  Q
    ||||||| || ||||||||||||    
T  4679 ggaacctactaacgtgcgacatc 4657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 7504 - 7665
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||| | ||| ||||| ||||| ||||||||||| ||||| || || ||||    
T  7504 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttcta 7603  T
Q  175 acaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcactgcttcaag 236  Q
     ||| |||||| ||||   |||||||||||| |||||||| ||||| ||||| |||| ||||    
T  7604 tcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaag 7665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 125 - 10
Alignment:
Q  75 accttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcacttcgcaaagccattgaagagtctaggattttcattcccgtcttgtcta 174  Q
    ||||||||||||||||  || |||||| |||| || ||||| ||||| ||||| | ||| ||||| ||||| ||||||||||| ||||| || || ||||    
T  125 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttcta 26  T
Q  175 acaattacgcctcttc 190  Q
     ||| |||||| ||||    
T  25 tcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 298
Target Start/End: Original strand, 16688944 - 16689213
Alignment:
Q  29 ttttattggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagagcttcaaggaggtgacgaaataacaccgtcactt 128  Q
    ||||| ||| ||||| ||||||| ||| ||| | |||||||| ||   ||||||||||||||  || |||||  |||||||| |||| ||||| ||||||    
T  16688944 ttttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcactt 16689043  T
Q  129 cgcaaagccattgaagagtctaggattttcattcccgtcttgtctaacaattacgcctcttcttcattttgcttggatgaacttgtgcacatcattcact 228  Q
      ||| || |||||||| || ||||||   || ||||| || ||||| || || || | ||| || ||||| ||||||||||||||  |||||||| |      
T  16689044 atcaaggcaattgaagactcaaggattgcaatccccgtgttttctaagaactatgcattttcctcgttttgtttggatgaacttgtcaacatcattgatg 16689143  T
Q  229 gcttcaaggaaaataggcgcctagttttgccaatattctatgatgtggaaccttctcacgtgcgacatca 298  Q
    ||||||  | |||  | || |||||||||||  | |||||||| ||||| ||||| || ||| |||||||    
T  16689144 gcttcagtgcaaaaggtcggctagttttgcctgttttctatgacgtggatccttcgcatgtgagacatca 16689213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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