View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18033_low_39 (Length: 208)
Name: NF18033_low_39
Description: NF18033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18033_low_39 |
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Alignment Details
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 40 - 190
Target Start/End: Complemental strand, 39384777 - 39384627
Alignment:
| Q |
40 |
atgaaaacaggccatatagtattttgttcataaaacggtgaaaaaagcaaaagggtaagtgtaccttcttcatcagaagattgaaaaaattccaaagttc |
139 |
Q |
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| T |
39384777 |
atgaaaacaggccatataatattttgttcataaaacggtgaaaaaagcaaaagggtaagtgtaccttcttcatcagaagattgaaaagattccaaagttc |
39384678 |
T |
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| Q |
140 |
gaattattcgacgcctggtagattcatcgattttggtaggttgagcgtact |
190 |
Q |
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| T |
39384677 |
gaattattcgacgcctggtagattcatcgattttggtaggttgagcgtact |
39384627 |
T |
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